Metagenome / Metatranscriptome Family F082935

Basic Information
Family ID	F082935
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	47 residues
Representative Sequence	YRLSADELRRMKLTTADALFERDLAGPPPAKATTSLATVGQPAAPRD
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	93.81 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (72.566 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.584 % of family members)
Environment Ontology (ENVO)	Unclassified (22.124 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.982 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.00% β-sheet: 0.00% Coil/Unstructured: 92.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01592	NifU_N	43.36
PF01227	GTP_cyclohydroI	3.54
PF15617	C-C_Bond_Lyase	2.65
PF03328	HpcH_HpaI	1.77
PF00574	CLP_protease	0.88
PF10115	HlyU	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	43.36
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.77
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.77
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.77
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	1.77
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	1.77
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.57 %
Unclassified	root	N/A	27.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.57 %
Unclassified	root	N/A	27.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.57 %
Unclassified	root	N/A	27.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.60 %
Unclassified	root	N/A	27.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.60 %
Unclassified	root	N/A	27.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.16 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.31 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.31 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.31 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.31 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10412355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300000955\|JGI1027J12803_109255473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	677	Open in IMG/M
3300003911\|JGI25405J52794_10168767	Not Available	502	Open in IMG/M
3300004114\|Ga0062593_100803343	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300004463\|Ga0063356_103204581	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005332\|Ga0066388_104071361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300005332\|Ga0066388_106121230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	607	Open in IMG/M
3300005332\|Ga0066388_108171767	Not Available	522	Open in IMG/M
3300005333\|Ga0070677_10168591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1033	Open in IMG/M
3300005339\|Ga0070660_100053635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3111	Open in IMG/M
3300005436\|Ga0070713_100200120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1804	Open in IMG/M
3300005445\|Ga0070708_101295052	Not Available	681	Open in IMG/M
3300005459\|Ga0068867_102366784	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005466\|Ga0070685_11417843	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005555\|Ga0066692_10701450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300005557\|Ga0066704_10515901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300005561\|Ga0066699_11049499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300005569\|Ga0066705_10528469	Not Available	735	Open in IMG/M
3300005569\|Ga0066705_10760814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300005713\|Ga0066905_100002773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6676	Open in IMG/M
3300005713\|Ga0066905_101557674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300005764\|Ga0066903_100729053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1755	Open in IMG/M
3300005764\|Ga0066903_104078824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	782	Open in IMG/M
3300005764\|Ga0066903_105037437	Not Available	700	Open in IMG/M
3300005764\|Ga0066903_109026498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300006038\|Ga0075365_10446402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300006178\|Ga0075367_10187214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300006178\|Ga0075367_10782586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300006580\|Ga0074049_10015810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300006603\|Ga0074064_11121565	Not Available	530	Open in IMG/M
3300006844\|Ga0075428_101259639	Not Available	778	Open in IMG/M
3300006845\|Ga0075421_102203849	Not Available	581	Open in IMG/M
3300006847\|Ga0075431_100023682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6285	Open in IMG/M
3300006969\|Ga0075419_10570177	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300007788\|Ga0099795_10651056	Not Available	504	Open in IMG/M
3300009137\|Ga0066709_102611328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300009792\|Ga0126374_10199767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1264	Open in IMG/M
3300010048\|Ga0126373_11611070	Not Available	714	Open in IMG/M
3300010360\|Ga0126372_10346961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1329	Open in IMG/M
3300010360\|Ga0126372_11673546	Not Available	677	Open in IMG/M
3300010362\|Ga0126377_12535398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300010376\|Ga0126381_101959450	Not Available	844	Open in IMG/M
3300010398\|Ga0126383_10083034	All Organisms → cellular organisms → Bacteria	2804	Open in IMG/M
3300011107\|Ga0151490_1285695	Not Available	581	Open in IMG/M
3300012362\|Ga0137361_10416656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1234	Open in IMG/M
3300012893\|Ga0157284_10340803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300012948\|Ga0126375_11303112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300012951\|Ga0164300_11083953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300012961\|Ga0164302_10724373	Not Available	740	Open in IMG/M
3300012971\|Ga0126369_11323813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300012972\|Ga0134077_10323056	Not Available	652	Open in IMG/M
3300012984\|Ga0164309_11138275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300015371\|Ga0132258_10480664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3102	Open in IMG/M
3300016294\|Ga0182041_10411118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1154	Open in IMG/M
3300018000\|Ga0184604_10230766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300018078\|Ga0184612_10568472	Not Available	542	Open in IMG/M
3300018468\|Ga0066662_12078924	Not Available	595	Open in IMG/M
3300018469\|Ga0190270_13057496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	529	Open in IMG/M
3300019887\|Ga0193729_1088191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300021078\|Ga0210381_10231346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M
3300021168\|Ga0210406_11139038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300021178\|Ga0210408_10355402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1168	Open in IMG/M
3300021510\|Ga0222621_1051792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300021560\|Ga0126371_11093150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300021560\|Ga0126371_11560889	Not Available	787	Open in IMG/M
3300021560\|Ga0126371_12766907	Not Available	595	Open in IMG/M
3300024288\|Ga0179589_10460838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300025885\|Ga0207653_10159611	Not Available	834	Open in IMG/M
3300025928\|Ga0207700_10022332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4340	Open in IMG/M
3300025938\|Ga0207704_10601546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300026285\|Ga0209438_1104559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	846	Open in IMG/M
3300026527\|Ga0209059_1219602	Not Available	638	Open in IMG/M
3300026528\|Ga0209378_1084218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1431	Open in IMG/M
3300027576\|Ga0209003_1010305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1393	Open in IMG/M
3300027873\|Ga0209814_10081067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1368	Open in IMG/M
3300028711\|Ga0307293_10307122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	503	Open in IMG/M
3300028714\|Ga0307309_10022601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1235	Open in IMG/M
3300028716\|Ga0307311_10061069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300028716\|Ga0307311_10088780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300028720\|Ga0307317_10071885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1128	Open in IMG/M
3300028721\|Ga0307315_10032567	Not Available	1399	Open in IMG/M
3300028755\|Ga0307316_10165249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300028768\|Ga0307280_10314505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300028787\|Ga0307323_10189391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300028791\|Ga0307290_10254482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300028819\|Ga0307296_10050622	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300028819\|Ga0307296_10712586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	548	Open in IMG/M
3300028875\|Ga0307289_10369203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300028876\|Ga0307286_10266833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300028880\|Ga0307300_10180031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300031544\|Ga0318534_10166555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1273	Open in IMG/M
3300031545\|Ga0318541_10231815	Not Available	1024	Open in IMG/M
3300031668\|Ga0318542_10108143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1349	Open in IMG/M
3300031681\|Ga0318572_10102523	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300031681\|Ga0318572_10424729	Not Available	790	Open in IMG/M
3300031713\|Ga0318496_10250443	Not Available	976	Open in IMG/M
3300031713\|Ga0318496_10812532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300031736\|Ga0318501_10747631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300031740\|Ga0307468_100566359	Not Available	919	Open in IMG/M
3300031805\|Ga0318497_10579749	Not Available	629	Open in IMG/M
3300031858\|Ga0310892_10799836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300031860\|Ga0318495_10045532	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300031892\|Ga0310893_10513726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300031941\|Ga0310912_10430786	Not Available	1027	Open in IMG/M
3300031944\|Ga0310884_10568454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300031945\|Ga0310913_10192257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1423	Open in IMG/M
3300032042\|Ga0318545_10060172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1296	Open in IMG/M
3300032043\|Ga0318556_10344735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300032059\|Ga0318533_11291166	Not Available	533	Open in IMG/M
3300032063\|Ga0318504_10225128	Not Available	879	Open in IMG/M
3300032091\|Ga0318577_10104867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1325	Open in IMG/M
3300032094\|Ga0318540_10552679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300033289\|Ga0310914_10784824	Not Available	850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.73%
Host-Associated	Host-Associated	13.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.19%
Plants	Host-Associated → Plants	13.27%
Aquatic	Environmental → Aquatic	3.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.42%
Sediment	Environmental → Aquatic → Sediment	2.65%
Roots	Host-Associated → Plants → Roots	2.65%
Freshwater	Environmental → Aquatic → Freshwater	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.03%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.65%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.65%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.65%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_104123551	3300000550	Soil	DELRRMKLTTADAVFERDVAGPPPTKSTTSLATVGQPAAPRE*
JGI1027J12803_1092554731	3300000955	Soil	GELIETALRIPPWEPLYRLSPDELQRMNLSTVDAPFSRGVSPPAEAKAATSLVTVGHPGAARD*
JGI25405J52794_101687672	3300003911	Tabebuia Heterophylla Rhizosphere	DELQRMKLSTVDVLFEQTAPVASPAVPATSLATVGHPGGGRD*
Ga0062593_1008033433	3300004114	Soil	PWEPLYRLSPDELQRMRLNTVDALFDRDLPGVAPAKSTTSLATVGHPGPRD*
Ga0063356_1032045812	3300004463	Arabidopsis Thaliana Rhizosphere	PWEPLYRLSPDELQRMRLNTVDALFDRDLPGVAPAKSTTSLATVGHPVPRD*
Ga0066388_1040713613	3300005332	Tropical Forest Soil	EPLYRLSIDELRRMKLTTADALFERDLAGPQPTKTTTSLATVGQPAAPRD*
Ga0066388_1061212302	3300005332	Tropical Forest Soil	VELLETALRIPPWEPLYRLSADELQRMRLSTVDVLFEQNVPVASPALPATSLVTVGHPSGARE*
Ga0066388_1081717672	3300005332	Tropical Forest Soil	ADELRRMKLTTADALFERDPAGPPVAKTTTSLATVGQPAAPRD*
Ga0070677_101685911	3300005333	Miscanthus Rhizosphere	QRMKLNTVDALFDRDLPGASPAKSTTSLATVGHPGGPRD*
Ga0070660_1000536351	3300005339	Corn Rhizosphere	IPPWEPLYRLSPDELQRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD*
Ga0070713_1002001203	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PWEPLYRLSADELRRMKLTTADALFERDPAGPPPPKATTSLATVGQPAAPRD*
Ga0070708_1012950522	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SVDELRRMKLTTADALFEPAVAGAPPPKSATSLATLGQPAAPRE*
Ga0068867_1023667842	3300005459	Miscanthus Rhizosphere	IPPWEPLYRLSPDELQRMRLNTVDALFDRDLPGVAPAKSTTSLATVGHPVPRD*
Ga0070685_114178432	3300005466	Switchgrass Rhizosphere	LLETALRIPPWEPLYRLSPDELQRMRLNTVDALFDRDLPGVAPAKSTTSLATVGHPGPRD
Ga0066692_107014501	3300005555	Soil	RMKLTTADALFEREVAGTPPPKSTTSLTTVGQPAAGRD*
Ga0066704_105159011	3300005557	Soil	RMKLTTADALFEREVAGTPPPKSTTSLATVGQPAAGRD*
Ga0066699_110494991	3300005561	Soil	STDELRRMKLTTADALFEPEVAGTPPPKSTTSLTTVGQPAAGRD*
Ga0066705_105284692	3300005569	Soil	LSGDELERMRLNTTDAAFDHVAPGTEPAMATTLATVGQPGARRD*
Ga0066705_107608142	3300005569	Soil	PLYRLSTDELRRMKLTTADALFEPEVAGIPPPKSTTSLTTVGQPAAGRD*
Ga0066905_1000027731	3300005713	Tropical Forest Soil	LRIPPWEPLYRLSVDELRRMKLTTADALFEPVVAGPPPPKSTTSLATVGQPAAPRE*
Ga0066905_1015576742	3300005713	Tropical Forest Soil	TTADALFERDLAGPQPTKTTTSLATVGQPAAPRD*
Ga0066903_1007290534	3300005764	Tropical Forest Soil	ETALRIPPWEPLYRLSTDELQRMRLSTVDSLFERDLPKTAPIMPATSLATVGHPGVVPRD
Ga0066903_1040788241	3300005764	Tropical Forest Soil	IPPWEPLYRLSADELRRMKLTTADALFERDLAGPPPAKTTTSLATVGQPAAPRD*
Ga0066903_1050374371	3300005764	Tropical Forest Soil	YRLSADELRRMKLTTAEALFEQDLAGSPPPKSTTSLATVGQPVAPRD*
Ga0066903_1090264981	3300005764	Tropical Forest Soil	PPWEPLYRLSADELSRMRLTTVDTLFDRDVPGPAQATTTSLATVGQPSAPRQ*
Ga0075365_104464023	3300006038	Populus Endosphere	DELQRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD*
Ga0075367_101872141	3300006178	Populus Endosphere	QRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD*
Ga0075367_107825861	3300006178	Populus Endosphere	RMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD*
Ga0074049_100158101	3300006580	Soil	YRLSPDELQRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD*
Ga0074064_111215651	3300006603	Soil	RLSVDELRRMKLTTADALFERDLAGPPPAKATTSLATVGQPAAPRD*
Ga0075428_1012596391	3300006844	Populus Rhizosphere	KLSTVDVAFDQNVPSPSPSKSTTSLATVGHPGGGRE*
Ga0075421_1022038492	3300006845	Populus Rhizosphere	PWEPLYRLSADEVQRMKLSTVDVAFDQNVPSPSPTKSTTSLATVGHPSGARD*
Ga0075431_1000236821	3300006847	Populus Rhizosphere	ELRRMKLTTADAVFEREVAGPPPTKSTTSVATVGQPAAPRD*
Ga0075419_105701773	3300006969	Populus Rhizosphere	LQRMKLNTVDALFDRDPPRASSAKSATSLATVGQPGAGRD*
Ga0099795_106510562	3300007788	Vadose Zone Soil	TALRIPPWEPLYRLSADELRRMKLTTADALFEPDLAGPPPAKATTSLATVGQPAAPRD*
Ga0066709_1026113281	3300009137	Grasslands Soil	MKLTTADALFEPEVAGTPPPKSTTSLTTVGQPAAGRD*
Ga0126374_101997671	3300009792	Tropical Forest Soil	RMKLTTADALFERDLAGPQPAKTTTSLATVGQPAAPRD*
Ga0126373_116110701	3300010048	Tropical Forest Soil	TALRIPPWEPLYRLSADELRRMKLTTADALFERDLAGPPPAKATTSLATVGQPAAPRD*
Ga0126372_103469611	3300010360	Tropical Forest Soil	LYRLSADELQRMRLNTIDALFDRDLPGNAPAASTSLATVGQPGARRD*
Ga0126372_116735462	3300010360	Tropical Forest Soil	WEPLYRLSADELRRMKLTTADALFERDLVGPPVAKTTTSLATVGQPAAPRD*
Ga0126377_125353981	3300010362	Tropical Forest Soil	RRMKLTTADTLFEPELAGPPPAKTTTSLATVGQPAAPRD*
Ga0126381_1019594502	3300010376	Tropical Forest Soil	TTADALFERDPAGPPVAKTTTSLATVGQPAAPRE*
Ga0126383_100830341	3300010398	Tropical Forest Soil	MKLTTAEALFEPEVAGSPPPKSTTSLATVGQPAAPRD*
Ga0151490_12856951	3300011107	Soil	ADELRRMKLTTADALFERDLSGPPPAKATTSLATVGQPAAPRD*
Ga0137361_104166561	3300012362	Vadose Zone Soil	LSADELRRMKLTTADALFERDLAGPQPTKTTTSLATVGQPAAPRD*
Ga0157284_103408032	3300012893	Soil	LSPDELQRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD*
Ga0126375_113031122	3300012948	Tropical Forest Soil	DELRRMKLTTADALFERDLAGPQPTKTTTSLATVGQPAAPRD*
Ga0164300_110839531	3300012951	Soil	SGDLLETTLRIPPPEPLYRLSPDELQRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD*
Ga0164302_107243732	3300012961	Soil	TALRIPPWEPMYRLSSDELQRMRLTTVDALFAQQVPSAALPASQTTLATVGQQAAGSRD*
Ga0126369_113238131	3300012971	Tropical Forest Soil	DELRRMKLTTAEALFEQDLAGSPPPKSTTSLATVGQPAAPRD*
Ga0134077_103230561	3300012972	Grasslands Soil	LTTADALFERDLAGPPPAKATTSLATVGQPAAPRD*
Ga0164309_111382753	3300012984	Soil	ELRRMKLTTAEALFEPEVAGSPPRKSTTSLVTVGQPAVPRD*
Ga0132258_104806641	3300015371	Arabidopsis Rhizosphere	ALRIPPWEPLYRLSPDELQRMKLNTVDALFDRDLPRASSAKSATSLATVGHPGGARD*
Ga0182041_104111183	3300016294	Soil	RLSADELRRMKLTTADALFERDPAGPQPTKTTTSLATVGQPAAPRD
Ga0184604_102307662	3300018000	Groundwater Sediment	LQRMKLNTVDALFDRDLPRASSAKSTTSLATVGHPGAARD
Ga0184612_105684722	3300018078	Groundwater Sediment	LYRLSADELKLMRLSTLDALFDRDLPRTAPMVPATSLATVGQPGAAQRD
Ga0066662_120789242	3300018468	Grasslands Soil	YRLSADELRRMKLTTADALFERDLAGPPPAKATTSLATVGQPAAPRD
Ga0190270_130574962	3300018469	Soil	MKLNTVDALFDRDPPRASSAKSATSLATVGQPGAGRD
Ga0193729_10881911	3300019887	Soil	IPPWEPLYRLSPDELQRMKLNTVDALFDRDLPRASSAKSTTSLATVGHPGAARD
Ga0210381_102313461	3300021078	Groundwater Sediment	ALRIPPWEPLYRLSPDELQRMKLNTVDALFDRDLPRASSAKSTTSLATVGHPGAARD
Ga0210406_111390383	3300021168	Soil	KLTTADALFEREVGGSPPPKSTTSLATVGQPAAARD
Ga0210408_103554021	3300021178	Soil	KLTTAEALFEPDVAGSPPPKSTTSLATVGQPAAPRD
Ga0222621_10517921	3300021510	Groundwater Sediment	EPLYRLSPDELQRMKLNTVDALFDRDPPRASSAKSATSLATVGQPGAGRD
Ga0126371_110931503	3300021560	Tropical Forest Soil	LRVPPWEPLYKLSTDELRRMKLTTAEALFEPEVAGSPPPKSTTSLATVGQPAAPRD
Ga0126371_115608892	3300021560	Tropical Forest Soil	WEPLYRLSADELRRMKLTTADALFERDPAGPPVAKTTTSLATVGQPAAPRD
Ga0126371_127669071	3300021560	Tropical Forest Soil	WEPLYRLSADELRRMKLTTADALFERDLAGPPVAKTTTSLATVGQPAAPRD
Ga0179589_104608381	3300024288	Vadose Zone Soil	WEPLYRLSADELRRMKLTTAEALFEPDVAGSPPPKSTTSLATVGQPAAPRD
Ga0207653_101596112	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LSADELRRMKLTTADALFERDLAGPPPAKATTSLATVGQPAAPRD
Ga0207700_100223321	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PLYRLSADELRRMKLATAEALFEPEVAGSPPRKSTTSLVTVGQPAVPRD
Ga0207704_106015461	3300025938	Miscanthus Rhizosphere	LSPDELQRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD
Ga0209438_11045591	3300026285	Grasslands Soil	DELRRMKLTTADALFEREAGGSPPPKSTTSLATVGQPAAARD
Ga0209059_12196021	3300026527	Soil	EPLYRLSGDELERMRLNTTDAAFDHVAPGTEPAMATTLATVGQPGARRD
Ga0209378_10842181	3300026528	Soil	LTTADALFEPEVAGIPPPKSTTSLTTVGQPAAGRD
Ga0209003_10103051	3300027576	Forest Soil	RRMKLTTADALFERDPAGPPPAKATTSLATVGQPAAPRD
Ga0209814_100810673	3300027873	Populus Rhizosphere	YRLSADELRRMKLTTADAVFEREVAGPPPTKSTTSVATVGQPAAPRD
Ga0307293_103071221	3300028711	Soil	RLSPDELQRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD
Ga0307309_100226013	3300028714	Soil	ETALRIPPWEPLYRLSPDELQRMKLNTVDALFDRDPPRASSARSATSLATVGQPGAGRD
Ga0307311_100610693	3300028716	Soil	SPQELQRMKLNTIDALFDRDLPGASPAKSTTSLATVGHPGGPRD
Ga0307311_100887803	3300028716	Soil	ALRIPPWEPLYRLSPDELQRMKLNTVDALFDRDPPRASSARSATSLATVGQPGAGRD
Ga0307317_100718851	3300028720	Soil	LQRMKLNTVDALFDRDPPRASSAKSATSLATVGQPGAGRD
Ga0307315_100325671	3300028721	Soil	YRLSPDELQRMKLNTVDALFDRDLPRASSAKSTTSLATVGHPGAARD
Ga0307316_101652493	3300028755	Soil	TALRIPPWEPLYRLSPDELQRMKLNTVDALFDRDPPRASSAKSATSLATVGQPGAGRD
Ga0307280_103145051	3300028768	Soil	SPDELQRMKLNTVDALFDRDLPRASSAKSTTSLATVGHPGAARD
Ga0307323_101893913	3300028787	Soil	LSADELQRMKLNTIDALFDRDLPGASPAKATTSLATVGHPGGPRD
Ga0307290_102544823	3300028791	Soil	IPPWEPLYRLSPDELQRMKLNTVDALFDRDPPRASSAKSATSLATVGQPGAGRD
Ga0307296_100506225	3300028819	Soil	MKLNTVDALFDRDLPRASSAKSTTSLATVGHPGAARD
Ga0307296_107125861	3300028819	Soil	IPPWEPLYRLSADELQRMRLNTVDALFDRDRPAKAMVATPATSLATVGQPGAKRD
Ga0307289_103692032	3300028875	Soil	LETALRIPPWEPLYRLSPDELQRMKLNTVDALFDRDPPRASSAKSATSLATVGQPGAGRD
Ga0307286_102668331	3300028876	Soil	YRLSPDELQRMKLNTVDALFDRDPPRASSAKSATSLATVGQPGAGRD
Ga0307300_101800311	3300028880	Soil	WEPLYRLSPDELQRMKLNTVDALFDRDLPRASSAKSTTSLATVGHPGAARD
Ga0318534_101665553	3300031544	Soil	SADELRRMKLTTADALFERNPAGPPVAKTTTSLATVGQPAAPRD
Ga0318541_102318151	3300031545	Soil	PLYRLSADELRRMKLTTADALFERDLVGPPVAKTTTSLATVGQPAAPRD
Ga0318542_101081433	3300031668	Soil	KLTTADALFERDLAGPPPAKATTSLATVGQPAAPRD
Ga0318572_101025231	3300031681	Soil	EIRRMKLTTADALFERDLAGPQPAKTTTSLATVGQPAAPRD
Ga0318572_104247292	3300031681	Soil	PPWEPLYRLSADELRRMKLTTADALFERDPAGPPPAKATTSLATVGQPAAPRD
Ga0318496_102504431	3300031713	Soil	ELRRMKLTTADALFERDPAGPPVAKTTTSLATVGQPAAPRE
Ga0318496_108125321	3300031713	Soil	STDELRRMKLTTAEALFEPEVAGSPPPKSTTSLATVGQPAAPRD
Ga0318501_107476312	3300031736	Soil	TALRIPPWEPLYRLSADELSRMRLTTVDTLFDHDVPAPAQATTTSLATVGQPSAPRQ
Ga0307468_1005663591	3300031740	Hardwood Forest Soil	LYRLSADELQRMKLSTIDTLDKADITGSTPPKATTSVVTVGHPGAKQD
Ga0318497_105797491	3300031805	Soil	RMKLTTADALFERDLAGPPPAKATTSLATVGQPAAPRD
Ga0310892_107998361	3300031858	Soil	MRLNTVDALFDRDLPGVAPAKSTTSLATVGHPGPRD
Ga0318495_100455323	3300031860	Soil	LRRMKLTTADALFERDLAGPQPAKTTTSLATVGQPAAPRD
Ga0310893_105137262	3300031892	Soil	TALRIPPWEPLYRLSPDELQRMRLNTVDALFDRDLPGVAPAKSTTSLATVGHPGPRD
Ga0310912_104307861	3300031941	Soil	LETALRIPPWEPLYRLSADELRRMKLTTADALFERDLVGPPVAKTTTSLATVGQPAAPRD
Ga0310884_105684541	3300031944	Soil	SPDELQRMRLNTVDALFDRDLPGVAPAKSTTSLATVGHPGPRD
Ga0310913_101922571	3300031945	Soil	ALRIPPWEPLYRLSADELRRMKLTTADALFERNPAGPPVAKTTTSLATVGQPAAPRD
Ga0318545_100601721	3300032042	Soil	LYRLSADELRRMKLTTADALFERNPAGPPVAKTTTSLATVGQPAAPRD
Ga0318556_103447353	3300032043	Soil	WEPLYKLSTDELRRMKLTTAEALFEPEVAGSPPPKSTTSLATVGQPAAPRD
Ga0318533_112911661	3300032059	Soil	YRLSADELRRMKLTTADALFERDLVGPPVAKTTTSLATVGQPAAPRD
Ga0318504_102251281	3300032063	Soil	LYRLSADELRRMKLTTADALFEREPAGPPVAKTTTSLATVGQPAAPRE
Ga0318577_101048671	3300032091	Soil	WEPLYRLSADELRRMKLTTADALFERNPAGPPVAKTTTSLATVGQPAAPRD
Ga0318540_105526792	3300032094	Soil	LLETALRIPPWEPLYRLSAEELQRMRLNTVDAPFDRDSTRPAAVSAVTSLTTVGRPGGDPRE
Ga0310914_107848241	3300033289	Soil	RLSADELRRMKLTTADALFERDLAGPPPAKATTSLATVGQPAAPRD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082935

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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