Metagenome Family F082849

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082849
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	64 residues
Representative Sequence	RFVHTYTPSGGRTKVDLEGDFPAFPGMSEADELKMIDSFFTTVFAEDTATLRNWS
Number of Associated Samples	101
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.21 %
% of genes near scaffold ends (potentially truncated)	84.96 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (6.195 % of family members)
Environment Ontology (ENVO)	Unclassified (34.513 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.327 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.92% β-sheet: 16.87% Coil/Unstructured: 54.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF07992	Pyr_redox_2	19.47
PF12833	HTH_18	4.42
PF11937	DUF3455	1.77
PF00578	AhpC-TSA	1.77
PF04679	DNA_ligase_A_C	1.77
PF13374	TPR_10	1.77
PF00070	Pyr_redox	1.77
PF13091	PLDc_2	0.88
PF05239	PRC	0.88
PF00293	NUDIX	0.88
PF01636	APH	0.88
PF01738	DLH	0.88
PF00535	Glycos_transf_2	0.88
PF03601	Cons_hypoth698	0.88
PF03712	Cu2_monoox_C	0.88
PF03544	TonB_C	0.88
PF00486	Trans_reg_C	0.88
PF02742	Fe_dep_repr_C	0.88
PF14559	TPR_19	0.88
PF00248	Aldo_ket_red	0.88
PF01161	PBP	0.88
PF13185	GAF_2	0.88
PF13950	Obsolete Pfam Family	0.88
PF01872	RibD_C	0.88
PF09994	DUF2235	0.88
PF02687	FtsX	0.88
PF12697	Abhydrolase_6	0.88
PF00165	HTH_AraC	0.88
PF13433	Peripla_BP_5	0.88
PF00849	PseudoU_synth_2	0.88
PF07519	Tannase	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.77
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.88
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.88
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.88
COG1321	Mn-dependent transcriptional regulator MntR, DtxR family	Transcription [K]	0.88
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.88
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.88
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.19 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.19 %
Unclassified	root	N/A	5.31 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.54 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6.19 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.31 %
Unclassified	root	N/A	5.31 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.77 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.31 %
Unclassified	root	N/A	5.31 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.77 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.19 %
Unclassified	root	N/A	5.31 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.42 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	3.54 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.88 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.19 %
Unclassified	root	N/A	5.31 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	4.42 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	3.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.19 %
Unclassified	root	N/A	5.31 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	4.42 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	3.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.77 %
Bradyrhizobium campsiandrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium campsiandrae	0.88 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.19 %
Unclassified	root	N/A	5.31 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	4.42 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	3.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.77 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.88 %
Bradyrhizobium campsiandrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium campsiandrae	0.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.19 %
Unclassified	root	N/A	5.31 %
Conexibacter sp. DBS9H8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	4.42 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	3.54 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.77 %
Flavobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	0.88 %
Bradyrhizobium campsiandrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium campsiandrae	0.88 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0872950	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300004092\|Ga0062389_101682295	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300004157\|Ga0062590_102546605	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005184\|Ga0066671_11062196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	507	Open in IMG/M
3300005328\|Ga0070676_10189659	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300005332\|Ga0066388_106904759	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005343\|Ga0070687_101186582	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005434\|Ga0070709_11131155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	627	Open in IMG/M
3300005437\|Ga0070710_11072755	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005445\|Ga0070708_100011620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7165	Open in IMG/M
3300005446\|Ga0066686_10812711	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300005450\|Ga0066682_10337542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300005536\|Ga0070697_100095998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2459	Open in IMG/M
3300005543\|Ga0070672_100314108	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300005548\|Ga0070665_100416347	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300005617\|Ga0068859_100179577	All Organisms → cellular organisms → Bacteria	2199	Open in IMG/M
3300005617\|Ga0068859_102079007	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300005764\|Ga0066903_100308734	All Organisms → cellular organisms → Bacteria	2512	Open in IMG/M
3300005764\|Ga0066903_101887155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300005764\|Ga0066903_103478739	Not Available	849	Open in IMG/M
3300005764\|Ga0066903_106366985	Not Available	616	Open in IMG/M
3300005843\|Ga0068860_102240103	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300006046\|Ga0066652_101348205	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006237\|Ga0097621_100610007	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300006852\|Ga0075433_10579998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300006904\|Ga0075424_100573590	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300006904\|Ga0075424_101064854	All Organisms → cellular organisms → Bacteria → Acidobacteria	862	Open in IMG/M
3300006954\|Ga0079219_11725146	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300007076\|Ga0075435_101247509	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300009012\|Ga0066710_100001743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16701	Open in IMG/M
3300009100\|Ga0075418_10056018	All Organisms → cellular organisms → Bacteria	4216	Open in IMG/M
3300009143\|Ga0099792_10991289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	561	Open in IMG/M
3300009156\|Ga0111538_11351039	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300009162\|Ga0075423_11291716	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300009176\|Ga0105242_12959350	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009545\|Ga0105237_11574703	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300009678\|Ga0105252_10611838	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300009683\|Ga0116224_10577077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	537	Open in IMG/M
3300009824\|Ga0116219_10410120	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300009840\|Ga0126313_10679507	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300010042\|Ga0126314_10049317	All Organisms → cellular organisms → Bacteria	2728	Open in IMG/M
3300010358\|Ga0126370_10730299	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300010373\|Ga0134128_11943477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	648	Open in IMG/M
3300010379\|Ga0136449_100879557	Not Available	1464	Open in IMG/M
3300010398\|Ga0126383_12188950	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300010398\|Ga0126383_12797886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	570	Open in IMG/M
3300010403\|Ga0134123_12021277	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300012209\|Ga0137379_10188026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1978	Open in IMG/M
3300012210\|Ga0137378_10621499	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300012351\|Ga0137386_10651456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	757	Open in IMG/M
3300012357\|Ga0137384_11419411	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012360\|Ga0137375_10223865	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300012479\|Ga0157348_1025308	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012510\|Ga0157316_1041137	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012519\|Ga0157352_1105724	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012917\|Ga0137395_11290796	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300012931\|Ga0153915_11129316	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300012948\|Ga0126375_11456327	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012961\|Ga0164302_10447730	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012971\|Ga0126369_11177142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	856	Open in IMG/M
3300012971\|Ga0126369_12371165	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300013100\|Ga0157373_10282025	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Flavobacterium	1177	Open in IMG/M
3300013102\|Ga0157371_10361925	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300013296\|Ga0157374_11596738	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300013297\|Ga0157378_10704452	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300013297\|Ga0157378_11565369	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300013297\|Ga0157378_13151555	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300014160\|Ga0181517_10554328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	578	Open in IMG/M
3300014745\|Ga0157377_10116345	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1614	Open in IMG/M
3300014968\|Ga0157379_11089188	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300015372\|Ga0132256_101030513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	938	Open in IMG/M
3300015373\|Ga0132257_102888644	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300015374\|Ga0132255_100493065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1799	Open in IMG/M
3300015374\|Ga0132255_100809339	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300016319\|Ga0182033_11447895	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300016341\|Ga0182035_11656535	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300018431\|Ga0066655_10295872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1052	Open in IMG/M
3300018468\|Ga0066662_10477716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1127	Open in IMG/M
3300018469\|Ga0190270_11735912	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300021560\|Ga0126371_12256778	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300025906\|Ga0207699_10258765	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300025906\|Ga0207699_11145462	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025910\|Ga0207684_10051077	All Organisms → cellular organisms → Bacteria → Acidobacteria	3508	Open in IMG/M
3300025931\|Ga0207644_10900456	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300025936\|Ga0207670_11727740	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300025944\|Ga0207661_10207240	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1726	Open in IMG/M
3300025945\|Ga0207679_10960928	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300025961\|Ga0207712_11791568	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300025986\|Ga0207658_11197667	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300026078\|Ga0207702_10380888	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300026078\|Ga0207702_12516541	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300027695\|Ga0209966_1104346	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	643	Open in IMG/M
3300027867\|Ga0209167_10523420	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300027884\|Ga0209275_10559026	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031231\|Ga0170824_102435099	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031562\|Ga0310886_10041964	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300031796\|Ga0318576_10415926	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031805\|Ga0318497_10487708	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300031831\|Ga0318564_10278376	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300031854\|Ga0310904_10206002	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300031879\|Ga0306919_10481733	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300031912\|Ga0306921_12084376	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031938\|Ga0308175_100030508	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4450	Open in IMG/M
3300031995\|Ga0307409_100390078	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300031996\|Ga0308176_11500797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300032002\|Ga0307416_100967614	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300032059\|Ga0318533_11444700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium campsiandrae	502	Open in IMG/M
3300032089\|Ga0318525_10492314	Not Available	628	Open in IMG/M
3300032211\|Ga0310896_10914168	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300033004\|Ga0335084_11096035	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300033289\|Ga0310914_11419500	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.60%
Host-Associated	Host-Associated	35.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.06%
Plants	Host-Associated → Plants	35.40%
Aquatic	Environmental → Aquatic	3.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.73%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Sediment	Environmental → Aquatic → Sediment	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.70%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.77%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.77%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012479	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610	Environmental	Open in IMG/M
3300012510	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_08729502	2228664022	Soil	GAFDGARFVHSYTPIGSQTKVDLEGDFPAMPGMNADDELKMIDGFFTMTFSEDTATLRTWPDAPRA
Ga0062389_1016822952	3300004092	Bog Forest Soil	SGARFIHSYTSMGNRTKVDLEGDFPAFPGMPEADELKMIDDFFTMVFNEDTTTLKTKSEAYAV*
Ga0062590_1025466051	3300004157	Soil	LDRPNGVQSAMIGGAFDGAKFVHSYTTNGRKTTVDLEGTFLAIPGVSEEDELRMIDGFFTQAFAEDAATLKAWA*
Ga0066671_110621961	3300005184	Soil	ARFVHSYTPIGHKTKVDLHGDFPAFPGMTEGDELKMIDGFFSTVFAEDAAILRGPGVN*
Ga0070676_101896593	3300005328	Miscanthus Rhizosphere	ETTMIGGHFDGARFTHSYTPVGERTKVDLKGDFPALPGVSEADELAMIDGFFTTVFAEDTATLRTWSPETQR*
Ga0066388_1069047591	3300005332	Tropical Forest Soil	TGIVTAMAGGHFDGARFTHSYTPLGDRTKVDLEGDFPALRGMSEADELAMIDGFFTTVFAEDAETLRTWSPNGHP*
Ga0070687_1011865822	3300005343	Switchgrass Rhizosphere	ANGKVQVDLRGEFPAMPGMPEADELKMIDGFFTMIFAEDAETIRTWA*
Ga0070709_111311551	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GGPFDGARFVHTYTPAGGKTTVDLEGDLPAFAGISEAEELRMIDRFFTTIFAEDMATLRNWS*
Ga0070710_110727551	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TPLGDRTKVDVTGDFPALPGMSEAEELAMIDGFFTTVFGEDAETLRTWSPNGH*
Ga0070708_1000116202	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGGQTKLDLEGDFPAFPGMPEAEELKMIDGFFTAIFAEDTVTPRNWPELHA*
Ga0066686_108127111	3300005446	Soil	MGGKTKVDVRRDVPAFPGMSKSDELRMIDGFFTQVFAEDTATLRKWTKADK*
Ga0066682_103375421	3300005450	Soil	MAGGPFDGARFVHSYTPTGQKTRVDLEGEFPAFPLMAEADELNMIDGVPTTVFAEDTAMLRAWS*
Ga0070697_1000959983	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGGQTKVDLEGDFPAFPGMPEAEELKMIDGFFTAIFAEDTVTPRNWPELHA*
Ga0070672_1003141082	3300005543	Miscanthus Rhizosphere	EVTVEAEIFNQDGSTVVTNITHRLNPPKGIETTMSGGVFSGAKFTHSYTDVDGKTTVDLEGTFPAFPGVTEPDELKMIDDFFATVFAEDTETLKSLSTQHAQ*
Ga0070665_1004163471	3300005548	Switchgrass Rhizosphere	TTMSGGAFSGANFTHSYTDADGKTIVDLEGNFPAFPGMTESDELKMIDDFFTMVFAEDTETLKWLSTQHVQ*
Ga0068859_1001795771	3300005617	Switchgrass Rhizosphere	FVHAYTSVDGKTQVDLEGEFPAFPGMAEADELEMIDGFFTLAFAEDMATLRNLSEAHA*
Ga0068859_1020790072	3300005617	Switchgrass Rhizosphere	VETTMIGGAFDGAKFVHAYTPNGRKTRVDLEGTFPAMPGLSEADELKMIDGFFTQAFAEDEATLKAWA*
Ga0068864_1021657251	3300005618	Switchgrass Rhizosphere	VHAYTSVNGKTQVDLEGEFPAFPGMAEADELEMIDGFFTLAFAEDMATLRNLSEAHA*
Ga0066903_1003087344	3300005764	Tropical Forest Soil	RFVHTYTPLGERTKVDLQGEFPTLPGMTEADELAMIDGFFTTVFDEDTVTLRTWSPEQ*
Ga0066903_1018871552	3300005764	Tropical Forest Soil	GGPFDGARFVHSYTPVGGQTAVDLDGDFPSLPGMSEADELAMIDGFFTTVFAEDTATLRTWSPA*
Ga0066903_1034787391	3300005764	Tropical Forest Soil	FDGARFVHSYTPVGQKTRVDLDGEFPAFPGMPEADLLKMIDGFFSMTFAEDTATLAAWA*
Ga0066903_1063669851	3300005764	Tropical Forest Soil	GARLTHSYTALGDRTKVDVEGDFPALPGMSETEELAMLDGFFAAIFSEDTETIRTWSANGNG*
Ga0068860_1022401031	3300005843	Switchgrass Rhizosphere	THALSAPKSIETRMAGGPFDGARFTHVYTSMGNRTKVDLSGEFPAFPGMLEADELKMIDGFFTGAFAEDEVTIRNR*
Ga0066652_1013482052	3300006046	Soil	GARFVHSYTAMGSKTNVDLEGDFPAFPGMPEVDELNMINDFFTMVFAEDTETLKSRVEAYAL*
Ga0097621_1006100072	3300006237	Miscanthus Rhizosphere	MTGGAFDGARFHHSYTPLDGGRTKVDIEGEFPAMAGVQDADLLAMIDGFFTATFGEDAETLRT
Ga0075433_105799981	3300006852	Populus Rhizosphere	VTTMAGGPFDGARFVHSYTPTGQKTRVDLEGEFPAFPLMAEADELNMIDGFVTTAFAEDTAT
Ga0075424_1005735901	3300006904	Populus Rhizosphere	DGARFVHSYTPLGDRTKVDLEGDFPQLPGMSEADELTMIDGFFTMVFGEDAETLRTWSPNGHE*
Ga0075424_1010648542	3300006904	Populus Rhizosphere	TMSGGPFDGARFVHSYTPLGRRTKVDLEGEFPALPGMAEADELKMIDGMFTTLFAEDTATLRAWA*
Ga0079219_117251461	3300006954	Agricultural Soil	FNFPKGIETTMEGGAFSGAKFTHSYTALGKKTRVDLEGDFPAFPGMPEADELAMIDGFFTKVFAEDTATLKERSLKLTY*
Ga0075435_1012475091	3300007076	Populus Rhizosphere	IGGHFDGARFVHSYTPLGERTKVDLRGDFPALPGMSEADELAMIDGFFTTVFAEDTATLRTWSPETPR*
Ga0066710_1000017436	3300009012	Grasslands Soil	VTTMAGGPFDGARFVHSYTPTGQKTRVDLEGEFPAFPLMAEADELNMIDGVPTTVFAEDTAMLRAWS
Ga0075418_100560185	3300009100	Populus Rhizosphere	VPNGVETTMIGGHFDGARFVHSYTPLGERTKVDLRGDFPALPGMSEADELAMIDGFFTTVFAEDTATLRTWSPETPR*
Ga0099792_109912892	3300009143	Vadose Zone Soil	MGGQTKVNLLSDFRRSRVMPEAEELRMIDGFFTVLFAEDTLTLRNWPEVQP*
Ga0111538_113510391	3300009156	Populus Rhizosphere	MSGGPFDGARFVQSYTSVNGKTRLDVDGEFPAFPGMAEADELKMIDGFLTLVFAEDTVTLRNMSEAHV*
Ga0075423_112917161	3300009162	Populus Rhizosphere	LGRRTKVDLEGEFPALPGMAEADELKMIDGMFTTLFAEDTATLRAWA*
Ga0105242_129593501	3300009176	Miscanthus Rhizosphere	VTNGRTKVDLEGHFPVLPGMPEAEELKMIDGFFTMAFAEDTETLRNWA*
Ga0105237_115747032	3300009545	Corn Rhizosphere	FNGARFFHAYTVTNGRTKVDLEGHFPVLPGMPEAEELKMIDGFFTMAFAEDTETLRNWA*
Ga0105252_106118382	3300009678	Soil	VGDQTRVDLEGDFPALPGMSEADELEMIDGFFTMVFTEDTATLRTWSPAE*
Ga0116224_105770771	3300009683	Peatlands Soil	NPPKGIETTMIGGAFDGARFTHSYTPTGGQTKVDLEGDFPAFPGMSEADELKMIDGFFATVFAEDMATLRSWS*
Ga0116219_104101201	3300009824	Peatlands Soil	TPVGDQTRVDLEGDFPALAGMSEADELEMIDGFFTMVFSEDTATLRTWSPAE*
Ga0126313_106795071	3300009840	Serpentine Soil	ARFAHTYKPIGEQTEVDLEGDFPALPGMSEADELAMIDGFFTTVFDEDTATLRTWSAAE*
Ga0126314_100493171	3300010042	Serpentine Soil	AAGQTRVDLEGEFPDMPGMSETDELGMIDGFLTMVFDEDTTTLRTWAPSSDAR*
Ga0126370_107302992	3300010358	Tropical Forest Soil	EHRLNPPTGIESRMIGGAFDGARFTHSYTPVGGSTRVDLEGEFPAIPGVNPSEELQMIDGFFTAAFAEDSATLCTWTPV*
Ga0134128_119434771	3300010373	Terrestrial Soil	GGPFDGAKFSHAYTPVNGGTKVDLQGDFPAFPGMAETAELQMIDGFFSGVFAEDMKTIRTWA*
Ga0136449_1008795572	3300010379	Peatlands Soil	GAFDGARFTHSYTPMDGKTKVDLEGDFPAFRGMSKADELKMIDGFFTTVFVEDTATLRSWS*
Ga0126383_121889501	3300010398	Tropical Forest Soil	TTITHTFNQPRGIETRMNGGPFSGARFTHSYTPVDNKTKVALEGEFPAFPGMSEVDELKMIDNFFTQVFAEDTATLQALS*
Ga0126383_127978862	3300010398	Tropical Forest Soil	RMIGGAFDGARFTHSYTPVGGSTRVDLEGEFPAIPGVKASDELQMIDGFFTAAFAEDSATLRTWTPV*
Ga0134123_120212771	3300010403	Terrestrial Soil	PAGVETMMVGGAFDGARFTHSYTPLADGRTKVDLSGEFPTMPGVSEDDELKMIDGFFTMTFSEDTATLRTWSGPAHA*
Ga0137379_101880262	3300012209	Vadose Zone Soil	MTGGAFDGAKFMHSYTPVGEHTKVDLEGDFPALPGMSSEDELAMIDGFFTTVFAEDTKTLRTWR*
Ga0137378_106214991	3300012210	Vadose Zone Soil	TIEHRLDPPKGIETRMIGGAFDGARFTHTYAPADGQTRVDLEGDFPAMPGMTEADELAMIDGFFTMAFDEDTATLRTWSPDA*
Ga0137386_106514562	3300012351	Vadose Zone Soil	MIGRAFDGARFTHAYTPVDGRTKVDLEGDFPAIPGMTETDELAMIDGFFTMVFDEDTATLRTWAA*
Ga0137384_114194112	3300012357	Vadose Zone Soil	DQPQGIETRMIGGAFDGARFTHSYTPIGDRTRVDLEGDFPAFPGMSEDNELKMIDEFFTMTLAEDTETLRTWSPAE*
Ga0137375_102238653	3300012360	Vadose Zone Soil	FTHTYTPVDGHTRVDLQGEFPEMAGMSEADELAMIDGFFTMVFDEDTETLRTWTP*
Ga0157348_10253081	3300012479	Unplanted Soil	HSYTPLGARTKVDLRGDFPALPGMSEADELAMIDGFFTTVFAEDTATLRTWSPETPR*
Ga0157316_10411371	3300012510	Arabidopsis Rhizosphere	VHSYTPLGERTKVDLRGDFPALPGMSEADELAMIDGFFTTVFAEDTATLRTWSPETPR*
Ga0157352_11057241	3300012519	Unplanted Soil	PKGIETTMSGGAFSGAKFTHSYTDVDGKTTVDLEGNFPAFPGVTEPDELKIIDDFFTMVFAEDTETLKSMSTQHAH*
Ga0137395_112907961	3300012917	Vadose Zone Soil	MGGQTKVDLEGDFPAFPGMPEAEELMINGFFTAVFAEDTVTLRNWPEVQA*
Ga0153915_111293162	3300012931	Freshwater Wetlands	YTPMGGRTKVDLEGDFPAMPGMTEADELKMIDGFFSMVFSEANATLRTWS*
Ga0126375_114563271	3300012948	Tropical Forest Soil	SYTPLGERTRVDLRGDFPALPGMSESDELAMIDGFFTTVFAEDAATLQTWSPETQQ*
Ga0164302_104477301	3300012961	Soil	GGPFDGATFTHTYTATGDQTRVDLEGDFPSMPGMPEADELAMIDGFFTAIFTEDTETLRTWS*
Ga0126369_111771422	3300012971	Tropical Forest Soil	IGGAFDGARFTHSYTPVGGSTRVDLEGEFPAIPGVKASDELQMIDGFFTAAFAEDSATLRTWTPV*
Ga0126369_123711651	3300012971	Tropical Forest Soil	HSYTPVGGSTRVDIEGEFPAMPGVPAAEELKMIDGFFTTAFAEDTATLRSWGQN*
Ga0157373_102820251	3300013100	Corn Rhizosphere	PKGIETTMSGGVFSGAKFTHSYTDVDGKTTVDLEGTFPAFPGVTEPDELKMIDDFFATVFAEDTETLKSLSTQHAQ*
Ga0157371_103619251	3300013102	Corn Rhizosphere	KGIETTMSGGVFSGAKFTHSYTDVDGKTTVDLEGTFPAFPGVTEPDELKMIDDFFAAVFAEDTETLKSLSTQHAQ*
Ga0157374_115967381	3300013296	Miscanthus Rhizosphere	GAFDGARFHHSYTPLDGGRTKVDIEGEFPAMAGVQDADLLAMIDGFFTATFGEDA*
Ga0157378_107044524	3300013297	Miscanthus Rhizosphere	MMSGGAFSGARFVHSYTSLGSKTKVDLEGNFPAFPGMPEADELNMINDFFTMIFAEDTETLKSRSE
Ga0157378_115653691	3300013297	Miscanthus Rhizosphere	PDGSTVITNITHRLNPPKGIETTMSGGAFSGAKFTHSYTDVDGKTTVDLEGNFPAFPGMTEPDELKMIDDFFTMVFAEDTETLKSLSTQHAH*
Ga0157378_131515552	3300013297	Miscanthus Rhizosphere	FDGARFTHSYTPLADGRTKVDLSGEFPTMPGVSEDDELKMIDGFFTMAFSEDTATLRTWSGQAHA*
Ga0181517_105543281	3300014160	Bog	IGDKTKVDLEGEFPLFPGMPEADELQMIDGFFSAVFAEDTATLRMWS*
Ga0157377_101163453	3300014745	Miscanthus Rhizosphere	HRLNPPKGIETTMSGGAFSGANFTHSYTDADGKTIVDLEGNFPAFPGMTESDELKMIDDFFTMVFAEDTETLKWLSTQHVQ*
Ga0157379_110891882	3300014968	Switchgrass Rhizosphere	STVITNITHRLNPPKGIETTMSGGAFSGAKFTHSYTDVDGKTTVDLEGNFPGFPGMTEPDELKMIDDFFTMVFAEDTETLKSLSTQHAH*
Ga0132256_1010305132	3300015372	Arabidopsis Rhizosphere	VHTYTPLGDRTDVALEGDLPALPGLSEADELAMIDGFFTSVFDEDTAPLRPWSPS*
Ga0132257_1028886442	3300015373	Arabidopsis Rhizosphere	ARFVQSYTSINDKTQLDVDGEFPAFPGMAEADELKMIDGFLTLVFAEDTVTLRNMSEAHV
Ga0132255_1004930655	3300015374	Arabidopsis Rhizosphere	YTPAGQKTRVDLEGEFPAFPLMAEADEPKMIDGFITTVFAEDTATLRAWS*
Ga0132255_1008093391	3300015374	Arabidopsis Rhizosphere	FDGARFVHSYTPQGRKTKVDLDGEFPALPGMPEADVLQMIDGFFTATFAEDTATLRAWA*
Ga0182033_114478951	3300016319	Soil	DGSTFETTIEHRLNAPTGIESRMIGGAFDGARFTHSYTPAGGSTRVDIEGEFPAMPGVPADEELKMIDGFFTAAFAEDTATLRSWQTAR
Ga0182035_116565352	3300016341	Soil	DGARFVHRYTPVGAATRVDLEGEFPEVSGMTEAAELEMIDGFFSMIFAEDTETLRTRA
Ga0066655_102958721	3300018431	Grasslands Soil	MAGGPFDGARFVHSYTPTGQKTRVDLEGEFPAFPLMAEADELNMIDGVPTTVFAEDTAMLRAWS
Ga0066662_104777161	3300018468	Grasslands Soil	SYTPTGQKTRVDLEGEFPAFPLMAEADELNMIDGVPTTVFAEDTAMLRAWS
Ga0190270_117359122	3300018469	Soil	FDGARFTHTYTPRGDTTQVDVEGDFPPMPGMSEADELQMIDGFFTMVYAEDTETLRQWSPAHALADSGSVA
Ga0126371_122567781	3300021560	Tropical Forest Soil	AAIETTMNGGPFDGARFVHSYMPAAGKTRVDLEGDFPAFPGMSEADELKMIDSFFATVFAEDVATLRNWS
Ga0207699_102587652	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	HGYTVTNGRTKVDLEGHFPLLPGMPEAEELKMIDGFFTMAFAEDTETLRNWA
Ga0207699_111454622	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	SGGPFDGARFVHTYTPAGGKTTVDLEGDLPAFAGISEAEELRMIDRFFTTIFAEDMATLRNWS
Ga0207684_100510771	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGGQTKLDLEGDFPAFPGMPEAEELKMIDGFFTAIFAEDTVTPRNWPELHA
Ga0207644_109004561	3300025931	Switchgrass Rhizosphere	TVVTNITHRLNPPKGIETTMSGGVFSGAKFTHSYTDVDGKTTVDLEGTFPAFPGVTEPDELKMIDDFFATVFAEDTETLKSLSTQHAQ
Ga0207670_117277402	3300025936	Switchgrass Rhizosphere	IETTMSGGAFSGANFTHSYTDADGKTIVDLEGNFPAFPGMTEPDELKMIDDFFTMVFAEDTETLKSLSMQHAQ
Ga0207661_102072401	3300025944	Corn Rhizosphere	TITHRLNPPKGIETTMSGGAFSGANFTHSYTDADGKTIVDLEGNFPAFPGMTEPDELKMIDDFFTMVFAEDTETLKSLSMQHAQ
Ga0207679_109609281	3300025945	Corn Rhizosphere	NGVETTMIGGHFDGARFVHSYTPLGERTKVDLRGDFPALPGMSEADELAMIDGFFTTVFAEDTATLRTWSPETPR
Ga0207712_117915681	3300025961	Switchgrass Rhizosphere	TTMAGGPFDGARFTHTYSPLAGKTRVDLTGEFPAMPGVPEAEELKMIDGFFTMAFAEDAATLREWS
Ga0207658_111976672	3300025986	Switchgrass Rhizosphere	THRLNPPKGIETTMSGGAFSGANFTHSYTDADGKTIVDLEGNFPAFPGMTESDELKMIDDFFTMVFAEDTETLKWLSTQHVQ
Ga0207702_103808883	3300026078	Corn Rhizosphere	HTYTPAGGRTNVALEGDFPALPGLSEADELAMIDDFFTSVFDEDTATLRTWSPS
Ga0207702_125165411	3300026078	Corn Rhizosphere	NGRTKVDLEGHFPLLPGMPEAEELKMIDGFFTMAFAEDTETLRNWA
Ga0209966_11043461	3300027695	Arabidopsis Thaliana Rhizosphere	DGARFAQSYTQANGKVLVDFEGEFPALPGMPEADVLKMIDGFFSQIYAEDAATLRTWTPGAR
Ga0209167_105234202	3300027867	Surface Soil	TMSGGPFDGARFVHSYTPIGAKTKVDLDGDFPAFPGMPEVDELRMIDGFFTGVFGEDTVTLRTWK
Ga0209275_105590262	3300027884	Soil	MSGGPFDGARFVHSYTPIGARTKVDLEGDFPAFPGMPEADELKMIDGFFTGVFGEDTVTLRTWK
Ga0268266_103829951	3300028379	Switchgrass Rhizosphere	GGAFSGAKFTHSYTDVDGKTTVDLEGTFPAFPGMTEPDELKMIDDFFMMVFAEDTETLKSMSTQHAH
Ga0170824_1024350992	3300031231	Forest Soil	GGPFDGARFFHSYSAVNGKTTVDLEGHFPAFPGMPEAEELKMIDGFFTSVFAEDTATLRNWSL
Ga0310886_100419641	3300031562	Soil	ARFVHSYTPLGERTKVDLRGDFPALPGMSEADELAMIDGFFTTVFAEDTATLRTWSPETP
Ga0318576_104159262	3300031796	Soil	RFVHTYTPSGGRTKVDLEGDFPAFPGMSEADELKMIDSFFTTVFAEDTATLRNWS
Ga0318497_104877082	3300031805	Soil	PKGVETTMAGGPFDGARFVHTFTPSGGRTKVDLEGDFPAFPGMSEADELKMIDSFFTTVFAEDTATLRNWS
Ga0318564_102783762	3300031831	Soil	ARLVHTYTPSGGRTKVDLEGDFPAFPGMSEADELKMIDSFFTTVFAEDTATLRNWS
Ga0310904_102060022	3300031854	Soil	GVETTMRGGPFSGAKFVHAYTSVNGKTQVDLEGEFPAFPGMAEADELEMIDGFFTLAFAEDMATLRNLSEAHA
Ga0306919_104817332	3300031879	Soil	HTYTPSGGRTKVDLEGDFPAFPGMSEADELKMIDSFFTTVFAEDTATLRNWS
Ga0306921_120843761	3300031912	Soil	GGPFDGARFVHSYTQANGRTKVDLEGDFPTFPGMPEADELKMIDSFFGMVFDEDAATLRTWSPVASH
Ga0308175_1000305082	3300031938	Soil	MTGGPFDGARFTHTYTSLADGKQTRVDLAGDFPPVPGISPEDELRMIDGMFTTFFAEDTATLRKWDHGA
Ga0307409_1003900781	3300031995	Rhizosphere	VSGGGFDGARVTHTYTPHGNTTQVDIEREFPPMPGMSETDQLQMIDGFFTMMFAEDTETLRQWSPAHEL
Ga0308176_115007972	3300031996	Soil	RFTYSYTPLADGRTKVDLAGQFPAIPGVSEADELQMIDSFFTMAFAEDTATLRTWSDRAH
Ga0307416_1009676141	3300032002	Rhizosphere	TMTGGAFDGARFVHSYTPANGRTKVDLAGEFPALPGMSEADELKMIDGFFSMVFSEDAVTLRTWSEDAGR
Ga0318533_114447002	3300032059	Soil	FTPSGGRTKVDLEGDFPAFPGMSEADELKMIDSFFTTVFAEDTATLRNWS
Ga0318525_104923142	3300032089	Soil	YTPLGDRTKIDLEGDFPLLPGMSQAEELAMIDGFFTTIFGEDAETIRAWSPNSHA
Ga0310896_109141681	3300032211	Soil	TMRGGPFSGAKFVHAYTSVNGKTQVDLEGEFPAFPGMAGADELKMIDGFLTTVFAEDTVTLRDMSEAHV
Ga0335084_110960352	3300033004	Soil	RFMHSYTALGDRTRVDLEGDFPTLSGMSEAEELTMIDGFFSMVFGEDAETIRTWAPNEGA
Ga0310914_114195001	3300033289	Soil	RLVHTYTPSGGRTKVDLEGDFPAFPGMSEADELKMIDSFFTTVFAEDTATLRNWS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082849

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences