Metagenome / Metatranscriptome Family F082847

Basic Information
Family ID	F082847
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	49 residues
Representative Sequence	MPTPVPRDPSQAALRSLIWRVVVFFVAGLAVIAAFAIAWRFGAFAPA
Number of Associated Samples	100
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.12 %
% of genes near scaffold ends (potentially truncated)	36.28 %
% of genes from short scaffolds (< 2000 bps)	91.15 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Bacteria (74.336 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.389 % of family members)
Environment Ontology (ENVO)	Unclassified (34.513 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.018 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.67% β-sheet: 0.00% Coil/Unstructured: 57.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00313	CSD	13.27
PF13167	GTP-bdg_N	6.19
PF01555	N6_N4_Mtase	3.54
PF01192	RNA_pol_Rpb6	3.54
PF07602	DUF1565	2.65
PF13229	Beta_helix	2.65
PF00990	GGDEF	2.65
PF00106	adh_short	1.77
PF04041	Glyco_hydro_130	1.77
PF00248	Aldo_ket_red	1.77
PF00072	Response_reg	0.88
PF13191	AAA_16	0.88
PF08007	JmjC_2	0.88
PF00201	UDPGT	0.88
PF03795	YCII	0.88
PF04773	FecR	0.88
PF12728	HTH_17	0.88
PF12146	Hydrolase_4	0.88
PF02417	Chromate_transp	0.88
PF00069	Pkinase	0.88
PF02518	HATPase_c	0.88
PF00291	PALP	0.88
PF13231	PMT_2	0.88
PF00575	S1	0.88
PF00326	Peptidase_S9	0.88
PF02653	BPD_transp_2	0.88
PF00457	Glyco_hydro_11	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.54
COG0863	DNA modification methylase	Replication, recombination and repair [L]	3.54
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	3.54
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	3.54
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	3.54
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.77
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	1.77
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.88
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.22 %
Unclassified	root	N/A	24.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.22 %
Unclassified	root	N/A	24.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.34 %
Unclassified	root	N/A	24.78 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.97 %
Unclassified	root	N/A	24.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.65 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	18.58 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	18.58 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.88 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.88 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	15.93 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	1.77 %
Oleiphilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae	0.88 %
Chlorophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae	0.88 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.88 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.88 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.78 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	5.31 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.77 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %
Oleiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	0.88 %
CS clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.78 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	4.42 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.77 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	0.88 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.88 %
Sphaeropleales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %
Oleiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.78 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	2.65 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.77 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.88 %
Scenedesmaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Scenedesmaceae	0.88 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %
Oleiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.78 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2.65 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.77 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.88 %
unclassified Haliangium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → unclassified Haliangium	0.88 %
Scenedesmaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Scenedesmaceae	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %
Oleiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.78 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2.65 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1.77 %
Haliangium sp. UPWRP_2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → unclassified Haliangium → Haliangium sp. UPWRP_2	0.88 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.88 %
Scenedesmaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Scenedesmaceae	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.88 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.88 %
Oleiphilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	0.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1968260	Not Available	629	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101130141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	580	Open in IMG/M
3300004025\|Ga0055433_10085408	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300004114\|Ga0062593_100211748	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300004156\|Ga0062589_101669317	Not Available	634	Open in IMG/M
3300004157\|Ga0062590_100383515	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300004463\|Ga0063356_100404009	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1758	Open in IMG/M
3300004479\|Ga0062595_101535467	Not Available	616	Open in IMG/M
3300004480\|Ga0062592_101217715	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300004633\|Ga0066395_10025902	All Organisms → cellular organisms → Bacteria	2392	Open in IMG/M
3300004800\|Ga0058861_11772625	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300005093\|Ga0062594_100179023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1442	Open in IMG/M
3300005093\|Ga0062594_101933319	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300005093\|Ga0062594_103145066	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005290\|Ga0065712_10117303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oleiphilaceae → Oleiphilus	1722	Open in IMG/M
3300005329\|Ga0070683_102223379	Not Available	526	Open in IMG/M
3300005331\|Ga0070670_100388795	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1230	Open in IMG/M
3300005336\|Ga0070680_101249837	Not Available	642	Open in IMG/M
3300005338\|Ga0068868_100645548	Not Available	942	Open in IMG/M
3300005355\|Ga0070671_100331761	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300005355\|Ga0070671_101735055	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005364\|Ga0070673_100960162	Not Available	794	Open in IMG/M
3300005365\|Ga0070688_100737691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	766	Open in IMG/M
3300005367\|Ga0070667_100605213	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300005367\|Ga0070667_101885450	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005436\|Ga0070713_102307332	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005439\|Ga0070711_100581540	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300005458\|Ga0070681_10450114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1200	Open in IMG/M
3300005530\|Ga0070679_100846175	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300005534\|Ga0070735_10799966	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005535\|Ga0070684_101530549	Not Available	629	Open in IMG/M
3300005535\|Ga0070684_102346812	Not Available	503	Open in IMG/M
3300005541\|Ga0070733_10744638	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005546\|Ga0070696_101451714	Not Available	586	Open in IMG/M
3300005564\|Ga0070664_102404643	Not Available	500	Open in IMG/M
3300005587\|Ga0066654_10497593	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300005713\|Ga0066905_102087124	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005764\|Ga0066903_101904824	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005764\|Ga0066903_102043060	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300005836\|Ga0074470_10445203	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005840\|Ga0068870_10271196	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300006237\|Ga0097621_100750907	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300006237\|Ga0097621_100784455	Not Available	882	Open in IMG/M
3300009093\|Ga0105240_10076331	All Organisms → cellular organisms → Bacteria	4131	Open in IMG/M
3300009156\|Ga0111538_13334620	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300009157\|Ga0105092_10768635	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300009168\|Ga0105104_10750365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → unclassified Haliangium → Haliangium sp. UPWRP_2	564	Open in IMG/M
3300009610\|Ga0105340_1471660	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300009678\|Ga0105252_10114278	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	1096	Open in IMG/M
3300009678\|Ga0105252_10215220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	829	Open in IMG/M
3300010397\|Ga0134124_10742412	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300011119\|Ga0105246_11611218	Not Available	614	Open in IMG/M
3300011420\|Ga0137314_1075333	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Sphaeropleales → Scenedesmaceae	821	Open in IMG/M
3300011422\|Ga0137425_1025095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1270	Open in IMG/M
3300011432\|Ga0137428_1075148	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	929	Open in IMG/M
3300012175\|Ga0137321_1102935	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300012204\|Ga0137374_10001776	All Organisms → cellular organisms → Bacteria	24880	Open in IMG/M
3300012212\|Ga0150985_101697771	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300012353\|Ga0137367_10317944	All Organisms → cellular organisms → Bacteria → Proteobacteria	1112	Open in IMG/M
3300012469\|Ga0150984_121963907	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300012892\|Ga0157294_10167488	Not Available	623	Open in IMG/M
3300012898\|Ga0157293_10193383	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300012958\|Ga0164299_10276432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1018	Open in IMG/M
3300012960\|Ga0164301_10535895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	852	Open in IMG/M
3300012987\|Ga0164307_11632118	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300015357\|Ga0134072_10104048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	877	Open in IMG/M
3300015371\|Ga0132258_12699720	Not Available	1239	Open in IMG/M
3300015374\|Ga0132255_100353902	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300016270\|Ga0182036_11116793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	653	Open in IMG/M
3300016371\|Ga0182034_11437679	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300017965\|Ga0190266_11315999	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300018073\|Ga0184624_10023527	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300018083\|Ga0184628_10005031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6309	Open in IMG/M
3300018432\|Ga0190275_12953518	Not Available	550	Open in IMG/M
3300018476\|Ga0190274_10561578	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300019361\|Ga0173482_10124436	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300019361\|Ga0173482_10461851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	606	Open in IMG/M
3300020000\|Ga0193692_1008022	All Organisms → cellular organisms → Bacteria	2651	Open in IMG/M
3300021415\|Ga0193694_1004972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1781	Open in IMG/M
3300025899\|Ga0207642_10792901	Not Available	602	Open in IMG/M
3300025903\|Ga0207680_10689013	Not Available	732	Open in IMG/M
3300025912\|Ga0207707_10464234	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300025913\|Ga0207695_10214856	Not Available	1832	Open in IMG/M
3300025915\|Ga0207693_11069099	Not Available	614	Open in IMG/M
3300025921\|Ga0207652_11256296	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300025925\|Ga0207650_10152758	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300025927\|Ga0207687_11327667	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300025930\|Ga0207701_10103121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2556	Open in IMG/M
3300025930\|Ga0207701_11379935	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300025944\|Ga0207661_10024355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	4587	Open in IMG/M
3300025986\|Ga0207658_10723596	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300025986\|Ga0207658_11332711	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300026078\|Ga0207702_11898130	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300026308\|Ga0209265_1058066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1177	Open in IMG/M
3300027717\|Ga0209998_10110205	Not Available	687	Open in IMG/M
3300027874\|Ga0209465_10005652	All Organisms → cellular organisms → Bacteria	5463	Open in IMG/M
3300028380\|Ga0268265_11188054	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300028802\|Ga0307503_10316873	Not Available	788	Open in IMG/M
3300031099\|Ga0308181_1045160	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300031640\|Ga0318555_10421424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	723	Open in IMG/M
3300031640\|Ga0318555_10444146	Not Available	703	Open in IMG/M
3300031679\|Ga0318561_10077432	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1716	Open in IMG/M
3300031740\|Ga0307468_102332728	Not Available	521	Open in IMG/M
3300031765\|Ga0318554_10314395	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300031777\|Ga0318543_10497813	Not Available	546	Open in IMG/M
3300031954\|Ga0306926_12134235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	626	Open in IMG/M
3300031962\|Ga0307479_10988653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	811	Open in IMG/M
3300032066\|Ga0318514_10502751	Not Available	645	Open in IMG/M
3300032094\|Ga0318540_10605882	Not Available	527	Open in IMG/M
3300032205\|Ga0307472_101821466	Not Available	605	Open in IMG/M
3300032828\|Ga0335080_12244300	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032955\|Ga0335076_10538097	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300032955\|Ga0335076_11527983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	555	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.57%
Host-Associated	Host-Associated	27.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.06%
Plants	Host-Associated → Plants	26.55%
Aquatic	Environmental → Aquatic	11.50%
Human	Host-Associated → Human	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.73%
Sediment	Environmental → Aquatic → Sediment	8.85%
Freshwater	Environmental → Aquatic → Freshwater	1.77%
Roots	Host-Associated → Plants → Roots	1.77%
Marine	Environmental → Aquatic → Marine	0.89%
Digestive System	Host-Associated → Human → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.59%
Loam	Environmental → Terrestrial → Soil → Loam	16.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.77%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.77%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.08%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012175	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT399_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082847

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_19682602	3300000033	Soil	MPTPEPSDPSQTALRSLIWRVVVFLVAAIAVIAAFVIAWRVGAFAPR*
INPhiseqgaiiFebDRAFT_1011301412	3300000364	Soil	MRTPAPDDPSQTALRSMIRRFLFFFAAGMLVIAAFVVAWLLGAFAPSRP*
Ga0055433_100854082	3300004025	Natural And Restored Wetlands	MPTPAPSDPSQTALRSLIRRVVVFFVAGIAVIAAFVIAWLVGAFTPPPR*
Ga0062593_1002117482	3300004114	Soil	MPTPVPRDRSQAALRSLIWRVVVFFVAGLAVIAAFAIAWRFGAFAPAGR*
Ga0062589_1016693171	3300004156	Soil	MSTLMPKDPSQAALRSLILRVVAFCVAGIAVIAAFVIAWRVGVFVPR*
Ga0062590_1003835152	3300004157	Soil	MPTPVPRDPSQAALRSLIWRVVVFFVAGLAVIAAFAIAWRFGAFAPAGR*
Ga0063356_1004040091	3300004463	Arabidopsis Thaliana Rhizosphere	MPTPNDPHQIALRSLIRRVVVILVAAIVVLAAFAIAWRVGAFTPSPR*
Ga0062595_1015354671	3300004479	Soil	MPTTPVPPDPSQRALRSLVWRVIVACIAGIAVIAAFVVAWRLGAFAA
Ga0062592_1012177151	3300004480	Soil	MLARKMPKRLPDEHSQAALRSLIQRVIVFFVAGLAVIGAFVVAWQLG
Ga0066395_100259022	3300004633	Tropical Forest Soil	MPKPAPTDPSQAALRSLIRRVIVFFVAALLVIAAFAIAWRLGAFAPSRP*
Ga0058861_117726253	3300004800	Host-Associated	LVAPTMLAAQMPKPVPDDPSEAALRSLVWRVVVFFVAGLVVIAAFVIAWRVGAFSPSRP*
Ga0062594_1001790232	3300005093	Soil	MPKLVPDDHSQAALRSLIRRVVVFFVAGVAVIAAFAIAWRLGVFKPSGR*
Ga0062594_1019333192	3300005093	Soil	MPTPAPNDPYQTALRSLIRRVVVIFVAAIVVIAAFVIAWRVGAFTPAPR*
Ga0062594_1031450662	3300005093	Soil	TPAPSDPSQTALRSLIRRVLVIFVAAIVVIAAFVIAWLVGAFTPSRP*
Ga0065712_101173033	3300005290	Miscanthus Rhizosphere	MPKPVPDDPSQAALRSLIRTVVVWFVAGVAVIAAFAIAWWLGFFKPSGR*
Ga0070683_1022233792	3300005329	Corn Rhizosphere	MPKLVPDDHSQAALRSLIRRVVVFFVAGVAVIAAFAIAWRLG
Ga0070670_1003887952	3300005331	Switchgrass Rhizosphere	MPQPAPSDPSQTALRSLIWRVIVFFVAAIAVIAAFVIAWRVGAFAPSGR*
Ga0070680_1012498371	3300005336	Corn Rhizosphere	MLAAQMPKPVPDDPSEAALRSLVWRVVVFFVAGLVVIAAFVIAWRVGAFS
Ga0068868_1006455482	3300005338	Miscanthus Rhizosphere	REMPTPVPRDRSQAALRSLIWRVVVFFVAGLAVIAAFAIAWRFGAFAPAGR*
Ga0070671_1003317612	3300005355	Switchgrass Rhizosphere	MPTPVPRDRSQAALRSLIWRVVVFFVAGLAGIAAFAIAWGFGAFAPAGR*
Ga0070671_1017350552	3300005355	Switchgrass Rhizosphere	MPTPMPDDPSQAALRSLIRRVVWFFVAGMLVIAAFIVAYLLGAFAPSRP*
Ga0070673_1009601621	3300005364	Switchgrass Rhizosphere	MPKPVPDDPSQAALRSLIRTVVVWFVAGVAVIAAFAIAWWLGFFKPSG
Ga0070688_1007376912	3300005365	Switchgrass Rhizosphere	MSTLMTKDPSQAALRSLILRVVAFCVAGIAVIAAFVIAWRVGVFVPR*
Ga0070667_1006052132	3300005367	Switchgrass Rhizosphere	MLAARMAKRVPDEHSQAALRSLIRRVVVFFVAGMAVIAAFAVAYRLGLFKPPGR*
Ga0070667_1018854502	3300005367	Switchgrass Rhizosphere	MRKPAPTDSSDPALRSLIRRVAWFFAAGMLVIAAFVVAWLLGAFAPSRP*
Ga0070713_1023073321	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPIPRDPSQAALRSLIWRVVVFFVAAIAVIAAFAIAWRVGAFSAARP*
Ga0070711_1005815402	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPTPVPSDASQTELRSLIWRVVVFFLAGMAVVGAFAIAWRMGAFAPSRP*
Ga0070681_104501143	3300005458	Corn Rhizosphere	MLAAQMPKPVPDDPSEAALRSLVWRVVVFFVAGLVVIAAFVIAWRVGAFSPSRP*
Ga0070679_1008461751	3300005530	Corn Rhizosphere	KPVPDDPSEAALRSLVWRVVVFFVAGLVVIAAFVIAWRVGAFSPSRP*
Ga0070735_107999661	3300005534	Surface Soil	VPAPVSNDPSRTALRSLVWRLVWFSAAALALIVAFAIAWRVGAFAPSGR*
Ga0070684_1015305491	3300005535	Corn Rhizosphere	SQAALRSLIWRVVVFFVAGLAVIAAFAIAWRFGAFAPAGR*
Ga0070684_1023468122	3300005535	Corn Rhizosphere	MLAARMAKRVPDEHSQAALRSLIQRVIVFFVAGLAVIGAFVVAWQLGLFKPSGR*
Ga0070733_107446381	3300005541	Surface Soil	PTRVPSDPSQAALRSLIWRVVLFFVAAIAFIVAFVIAWRLGAFSPSRP*
Ga0070696_1014517141	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPTPVPRDPSQAALRSLIWRVVVFFVAGLAVIAAFAIAWRFGAFAPA
Ga0070664_1024046431	3300005564	Corn Rhizosphere	SQAALRSLIRTVVVWFVAGVAVIAAFAIAWWLGFFKPSGR*
Ga0066654_104975932	3300005587	Soil	MLPAQMPTPDPNDPYQRALRSMIWRFAVFFVAAIAVIAAFVIAWRAGAFVPSRP*
Ga0066905_1020871242	3300005713	Tropical Forest Soil	MPAPVPSDPSQVALRSLIRRVVVFFVAGIAVIAAFAIAWRFGLFMPARP*
Ga0066903_1019048242	3300005764	Tropical Forest Soil	MPAPSDDPSQAALRSLIWRVVVFCVAALVVIAAFVIAWRVGAFTPSRP*
Ga0066903_1020430602	3300005764	Tropical Forest Soil	MPTPVPSDPTQKALRSLIWRVIMFFVAGMAVVAAFAIAWRLGAFAPSRP*
Ga0074470_104452032	3300005836	Sediment (Intertidal)	MRTPAPIDPADAALRSLIRRVVWFFAGGMLVIAAFVVAWLLGAFAPSGP*
Ga0068870_102711962	3300005840	Miscanthus Rhizosphere	MPTPVPRDRSQAALRSLIWRVVVFFVVGLAIIAAFAIAWRFGAFAPAGR*
Ga0097621_1007509072	3300006237	Miscanthus Rhizosphere	MPARPPPDDPSQVALRSLIRRVIIFMVAAIAVIVAFVIAWQVGAFAPAPR*
Ga0097621_1007844553	3300006237	Miscanthus Rhizosphere	MPKPTPRDPSEAALRSLIWRVVVFCVAAIAVIAAFVIAWRVGAFAPSRP*
Ga0105240_100763313	3300009093	Corn Rhizosphere	MLQGMPAPIDHSQKELSSLVSRVIVFSVAALAVIAAFAIAWRLGAFVPSRP*
Ga0111538_133346201	3300009156	Populus Rhizosphere	GPMRTPMPKDPDQTALRSLIWRVVVFIVAGIAVIAAFAIAWRVGAFVPR*
Ga0105092_107686352	3300009157	Freshwater Sediment	MPTPAPSDPSQTALRSLIWRVVVFLVAAIAVIAAFVIAWRVGAFAPR*
Ga0105104_107503651	3300009168	Freshwater Sediment	DPSERALRSLVWRVIVACVAGIAVIGAFVVAWRFGAFAPPRP*
Ga0105340_14716602	3300009610	Soil	MPTPVPKDASQIALRSLIWRVVVFFVAGIAVIAAFVIAWRVGAFVPR*
Ga0105252_101142782	3300009678	Soil	MPTPMPSDPSQIALRSLIWRVVVFLVAGIAVIAAFVIAWQVGAFTPSRP*
Ga0105252_102152202	3300009678	Soil	MSTPVPKDPSQTALRSLIWRVAVFFVAGIAVIAAFVIAWRVGAFAPR*
Ga0134124_107424123	3300010397	Terrestrial Soil	ALRSLIWRVIVFFVAAIAVIAAFVIAWRVGAFAPSRR*
Ga0105246_116112181	3300011119	Miscanthus Rhizosphere	MPKPVPDDPSQAALRSLIRTVVVWFVAGVAVIAAFAIAW
Ga0137314_10753331	3300011420	Soil	MPTPMPSDPSQIALRSLIWRVVVFLVAGIAVIAAFVIAWQV
Ga0137425_10250953	3300011422	Soil	MSTPVPKDPSQTALRSLIWRVVVFFVAGMAVIAAFVIAWRVGAFAPR*
Ga0137428_10751483	3300011432	Soil	MSTPAPKDPSQIALRSLIWRVVVFFVAGIAVIAAFVIAWRVGAFAPR*
Ga0137321_11029351	3300012175	Soil	RSLIWRVVVFLVAGIAVIAAFVIAWQVGAFTPSRP*
Ga0137374_1000177618	3300012204	Vadose Zone Soil	LLAEMPKPVPSDPAQIALRSLIWRVVVFFLAGLAVIATFVIAWRFGAFAPSRP*
Ga0150985_1016977711	3300012212	Avena Fatua Rhizosphere	MPAPGDPSQAALRSLIWRLVGFFVAALVVIAAFVIAWRVGAFSASRP*
Ga0137367_103179442	3300012353	Vadose Zone Soil	MRTPTPDDPSQAALRSLIRRVVWFFVAGMLVIAAFIVAYLLGAFAPSRP*
Ga0150984_1219639071	3300012469	Avena Fatua Rhizosphere	PVPSDPSQPALRSLIWRLVLFFVAAIAVVAAFVVAWRVGAFAPSRP*
Ga0157294_101674881	3300012892	Soil	MLARKMPKRIPDEHSQAALRSLIRRVIVFFVAGLAVIGAFVVAWQLGLFKPSGR*
Ga0157293_101933832	3300012898	Soil	MPTPAPSDPSQIALRSLIRRVLVIFVAALVVIAAFVIAWRVGAFTPSRP*
Ga0164299_102764322	3300012958	Soil	MAKRVPDEHSQAALRSLIRRVVVFFVAGMAVIAAFAVAYRLGLFKPPGR*
Ga0164301_105358952	3300012960	Soil	VPDEHSQAALRSLIRRVVVFFVAGMAVIAAFAVAYRLGLFKPPGR*
Ga0164307_116321181	3300012987	Soil	MLKPAPTDSSDPALRSLIRRVAWFFAAGMLVIAAFVVAWLLGAFAPSRP*
Ga0134072_101040482	3300015357	Grasslands Soil	MLPATMRTPTPDDPSQAALRSLIRRVVWFFVAGMLVIATFIVAYLLGAFAPSRP*
Ga0132258_126997202	3300015371	Arabidopsis Rhizosphere	MPTPVPSDPSQAALRSLIRRVVVFFVAGLVVIAAFAIAWRLGAFAPTGR*
Ga0132255_1003539021	3300015374	Arabidopsis Rhizosphere	SEAALRSLKGRVVMILVAATVVLVAFVIAWLVGAFAPSRP*
Ga0182036_111167932	3300016270	Soil	TPVPSDPYKNALRSLIWRVVAFSVAAMVVIAAFVIAWRIGAFEPARR
Ga0182034_114376792	3300016371	Soil	MSTSGPNEPSQIALRSLIWRVIVFFVAAMAVIAAFAIAWRLGAFAPSRP
Ga0190266_113159991	3300017965	Soil	MPTTPVPPDPSSQRALRSLVWRVIVACIAGIAVIAAFVIAWRLGAFAAPNR
Ga0184624_100235274	3300018073	Groundwater Sediment	MRTPAPDDPSQTALRSMIRRFLFFFAAGMLVIAAFVVAWLVGAFAPSRP
Ga0184628_100050314	3300018083	Groundwater Sediment	MSTLTPKDPSQAALRSLIWRVVVFLVAGIAVIAAFVIAWRVGAFVPR
Ga0190275_129535182	3300018432	Soil	MPTTPVPPDPSQRALRSLVWRVIVACIAGILVIAAFAVAWRLGVFVRFQ
Ga0190274_105615781	3300018476	Soil	PPMPTPAPSDPSQTALRSLIRRVLVIFVAAIVVIAAFVIAWRVGAFTPSRP
Ga0173482_101244363	3300019361	Soil	MLARKMPKRLPDEHSQAALRSLIQRVIVFFVAGLAVIGAFVVAWQLGLFKPSGR
Ga0173482_104618512	3300019361	Soil	MLARKMPKRIPDEHSQAALRSLIRTVVVWFVAGVAVIAAFAIAWWLGFFKPSGR
Ga0193692_10080222	3300020000	Soil	MHRASHDDAIRTMLPTPMRTPAPIDPHQAALRSMIRRFVWFFAAGMLVIAAFVVAWLLGAFAPSRP
Ga0193694_10049722	3300021415	Soil	MLPPHMRTPAPIDPHQAALRSMIRRFAWFFAAGMLVIAAFVVAWLLGAFAPSRP
Ga0207642_107929011	3300025899	Miscanthus Rhizosphere	MPTPVPRDRSQAALRSLIWRVVVFFVAGLAVIAAFAI
Ga0207680_106890132	3300025903	Switchgrass Rhizosphere	MPTPVPRDRSQAALRSLIWRVVVFFVAGLAVIAAFAIAWRFGAFAPAGR
Ga0207707_104642343	3300025912	Corn Rhizosphere	MLAAQMPKPVPDDPSEAALRSLVWRVVVFFVAGLVVIAAFVIAWRVGAFSPSRP
Ga0207695_102148561	3300025913	Corn Rhizosphere	MLQGMPAPIDHSQKELSSLVSRVIVFSVAALAVIAAFAIAWRLGAFVPSRP
Ga0207693_110690993	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RDPSQAALRSLIWRVVVFFVAAIAVIAAFAIAWRVGAFSAARP
Ga0207652_112562961	3300025921	Corn Rhizosphere	APTMLAAQMPKPVPDDPSEAALRSLVWRVVVFFVAGLVVIAAFVIAWRVGAFSPSRP
Ga0207650_101527582	3300025925	Switchgrass Rhizosphere	MPQPAPSDPSQTALRSLIWRVIVFFVAAIAVIAAFVIAWRVGAFAPSGR
Ga0207687_113276672	3300025927	Miscanthus Rhizosphere	MLAARMAKRVPDEHSQAALRSLIRRVVVFFVAGMAVIAAFAVAYRLGLFKPPGR
Ga0207701_101031212	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPKLVPDDHSQAALRSLIRRVVVFFVAGVAVIAAFAIAWRLGVFKPSGR
Ga0207701_113799352	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPTPAPNDPYQTALRSLIRRVVVIFVAAIVVIAAFVIAWRVGAFTP
Ga0207661_100243552	3300025944	Corn Rhizosphere	MPKPVPDDPSQAALRSLIRTVVVWFVAGVAVIAAFAIAWWLGFFKPSGR
Ga0207658_107235962	3300025986	Switchgrass Rhizosphere	MAKRVPDEHSQAALRSLIRRVVVFFVAGMAVIAAFAVAYRLGLFKPPGR
Ga0207658_113327112	3300025986	Switchgrass Rhizosphere	MRKPAPTDSSDPALRSLIRRVAWFFAAGMLVIAAFVVAWLLGAFAPSRP
Ga0207702_118981303	3300026078	Corn Rhizosphere	APTMLAAQMPKPVPDDPSQAALRSLIWRVVVFFVAGLVVIAAFVIAWRVGAFSPSRP
Ga0209265_10580662	3300026308	Soil	MLPAQMPTPDPNDPYQRALRSMIWRFAVFFVAAIAVIAAFVIAWRAGAFVPSRP
Ga0209998_101102052	3300027717	Arabidopsis Thaliana Rhizosphere	MPTPNDPHQIALRSLIRRVVVILVAAIVVLAAFAIAWRVGAFTPSPR
Ga0209465_100056524	3300027874	Tropical Forest Soil	MPKPAPTDPSQAALRSLIRRVIVFFVAALLVIAAFAIAWRLGAFAPSRP
Ga0268265_111880543	3300028380	Switchgrass Rhizosphere	SPMPTPAPNDPYQTALRSLIRRVVVIFVAAIVVIAAFVIAWRVGAFTPAPR
Ga0307503_103168732	3300028802	Soil	MPKLAPTDPSDPAQIALRSLIWRVAVFFVAGLAVIAAFAIAYRFGVFAPSRP
Ga0308181_10451603	3300031099	Soil	PAPIDPHQAALRSMIRRFAFFFAAGMLVIAAFVVAWLLGAFAPSRP
Ga0318555_104214242	3300031640	Soil	MPTPPSNDPAERALRSLIWRVVVFFVAGMALIAAFAVAWRLGAFSATRS
Ga0318555_104441461	3300031640	Soil	MPPAAPNDPHQKALRSLIWRVVGFSVAALAIIAAFAIAWRVGAFAPSRR
Ga0318561_100774323	3300031679	Soil	FQAALRSLIRRVVVILVVAIAAVAAYAIAWRVGAFEPSRP
Ga0307468_1023327282	3300031740	Hardwood Forest Soil	MIAAEMPTPVSNDPAEIALRSLIRRVVVFFLAGIGVIAAFVIAWRVGA
Ga0318554_103143951	3300031765	Soil	PSEIALRSMVRRFIVFFVAGMAVIAAFAIAYWIGAFTPSPR
Ga0318543_104978132	3300031777	Soil	VYSRGMARPVPSDPFQAALRSLIRRVVVILVVAIAAVAAYAIAWRVGAFEPSRP
Ga0306926_121342352	3300031954	Soil	MPAPVPSDPSETGLRSLIWRVVAFSVAAMVVIAAFVIAWRIGAFEPARR
Ga0307479_109886532	3300031962	Hardwood Forest Soil	TCRLDYARPAQMPAPVPSDLSQKALRSLIWRVAVFSMAAIAVIAAFAIAWRVGSFAPSRP
Ga0318514_105027512	3300032066	Soil	PSDPFQAALRSLIRRVVVILVVAIAAVAAYAIAWRVGAFEPSRP
Ga0318540_106058821	3300032094	Soil	VYSRGMARPVPSDPFQAALRSLIRRVVVILVVAIAAVAAYAIAWRVGAFE
Ga0307472_1018214662	3300032205	Hardwood Forest Soil	MPVPHDPSQAALRSLIWRVVVFFVAAIAVIAAFAIAWRVGAFSAARP
Ga0335080_122443001	3300032828	Soil	VPNDPSQAALRSLIWRVVAFLVAAIAVIAAFVIAWRLGAFAPSRP
Ga0335076_105380972	3300032955	Soil	AGLRSLIWRVVVFVVAGVAVIAAFVIAWRIGAFAPSHP
Ga0335076_115279832	3300032955	Soil	MPAPVPSDPSEAALRSLIRRVVVFFVVGLAVIAAFAIAWRVGAFAPAPR

Hidden Markov Model


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