Metagenome Family F082743

Basic Information
Family ID	F082743
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	64 residues
Representative Sequence	NNLTARDYLVGVPALRMALMAAQGGTAPTIVASPANVAFAKANLAQLKPKMDAADGAGRR
Number of Associated Samples	94
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.88 %
% of genes from short scaffolds (< 2000 bps)	0.88 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.620 % of family members)
Environment Ontology (ENVO)	Unclassified (38.053 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.947 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 46.59% β-sheet: 0.00% Coil/Unstructured: 53.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF12681	Glyoxalase_2	4.42
PF13738	Pyr_redox_3	3.54
PF01964	ThiC_Rad_SAM	2.65
PF03551	PadR	2.65
PF08327	AHSA1	2.65
PF14534	DUF4440	2.65
PF02494	HYR	1.77
PF00903	Glyoxalase	1.77
PF01965	DJ-1_PfpI	1.77
PF12704	MacB_PCD	1.77
PF14684	Tricorn_C1	1.77
PF13911	AhpC-TSA_2	0.88
PF04960	Glutaminase	0.88
PF04392	ABC_sub_bind	0.88
PF00795	CN_hydrolase	0.88
PF07635	PSCyt1	0.88
PF00571	CBS	0.88
PF02633	Creatininase	0.88
PF07992	Pyr_redox_2	0.88
PF00588	SpoU_methylase	0.88
PF08818	DUF1801	0.88
PF10035	DUF2179	0.88
PF01272	GreA_GreB	0.88
PF05491	RuvB_C	0.88
PF03706	LPG_synthase_TM	0.88
PF00797	Acetyltransf_2	0.88
PF13450	NAD_binding_8	0.88
PF13709	DUF4159	0.88
PF07676	PD40	0.88
PF00484	Pro_CA	0.88
PF02735	Ku	0.88
PF06452	CBM9_1	0.88
PF00291	PALP	0.88
PF07690	MFS_1	0.88
PF02401	LYTB	0.88
PF13442	Cytochrome_CBB3	0.88
PF12867	DinB_2	0.88
PF00717	Peptidase_S24	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	2.65
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.65
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.65
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.65
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	1.77
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.88
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.88
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.88
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.88
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.88
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.88
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.88
COG2066	Glutaminase	Amino acid transport and metabolism [E]	0.88
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.88
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.88
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.88

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300025935\|Ga0207709_10424322	Not Available	1022	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.98%
Host-Associated	Host-Associated	46.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.56%
Plants	Host-Associated → Plants	46.02%
Aquatic	Environmental → Aquatic	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.24%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Sediment	Environmental → Aquatic → Sediment	1.77%
Cave	Environmental → Terrestrial → Cave	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.58%
Loam	Environmental → Terrestrial → Soil → Loam	12.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.54%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.19%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.42%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.77%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012478	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_107447912	3300000891	Soil	ILKQNSLTARDYLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR*
JGI1027J12803_1003573583	3300000955	Soil	TGVPALRMALMAAQGATAPNIIASPANVAFAKANLAQLKPKMDAADGMRR*
Ga0062593_1024265472	3300004114	Soil	LTAQEYLVGVPALRMALMAAQGGAGAPGLTVSPANLAFAKANLAQLKPKLDAADGIRPRK
Ga0062593_1034205642	3300004114	Soil	QFEKDPKAMAILKQNGLTPQEYLVGVPALRMALMAAQGLANSPNIIASPANVAFAKANLPQLKPKMDAADGIGRK*
Ga0062589_1016115061	3300004156	Soil	YLVGVPALRMALLAASGVPEGPTVIASPGNIAFAKANLSVLKPKMDAADGVGARRQ*
Ga0062590_1001666211	3300004157	Soil	LTLQDYLVGVPALRMALMAAQGVKAPTVVASPANLAFAKANLAELKPKLDAADGTTARK*
Ga0063356_1051830582	3300004463	Arabidopsis Thaliana Rhizosphere	AAEILKRNQLTSRDYLVGVPTLRMALLAASGAPAGPTIIASPANVAFAKANLSVLKPKMDAADGAGARR*
Ga0062595_1002695602	3300004479	Soil	KAAAILKQNSLTARDYLIGVPALRMALMAAQGATTPSIVASPANVAFARANLAQLKPKMDAADGIRR*
Ga0062591_1026716851	3300004643	Soil	EKDPKISSILKENGLTARDYLVGVPTLRMALLVAQGLASPNIVASPANAAFAKANLAQLKPKMDQADGVARGR*
Ga0062379_101352232	3300004781	Wetland Sediment	GLTAQEYLVGVPALRMALMAAQGAAGSSGITASPANVAFAKANLAVLKPRMDAADGLARPK*
Ga0065712_104188142	3300005290	Miscanthus Rhizosphere	ARDYLIGVPALRMALMAAQGATAPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0070670_1019627362	3300005331	Switchgrass Rhizosphere	NGLTAQEYLVGVPTLRMALIVASPGGAPAPSIYASPANVAFAKANYAQLKPKMDAADGVSATKK*
Ga0066388_1009181341	3300005332	Tropical Forest Soil	IAQIDKDPKASDILKKNQLTAKDYIVGVPALRMALLAASGMPTSPNVIASPANAAFAKANLSVLKPKMDAADGAAARR*
Ga0070677_100181991	3300005333	Miscanthus Rhizosphere	VTPHGLKAKDYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ*
Ga0070692_102984731	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	SILKDNGLTARDYIVGVPTLRMALMAAQGLSTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR*
Ga0070673_1021651242	3300005364	Switchgrass Rhizosphere	LTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0070703_101601411	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	DSDPKAAAILKQNSLTARDYLIGVPALRMALMAAQGATAPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0070694_1006731861	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RDYLIGVPTLRMALLSAQGLASPNIVASPANVAFAKANLAQLKPKMDQADGLGRRK*
Ga0070678_1010069231	3300005456	Miscanthus Rhizosphere	AILKQNGLTAQDYLVGVPTLRMALMVAQGAPTGPNMIASPANVAFAKANLAQLKPKMDLADGIGARK*
Ga0070678_1013682361	3300005456	Miscanthus Rhizosphere	PALRMALMAAQGPADAPNLAVSPANLAFGRANLAQLKPKLDAADGIKPKK*
Ga0068867_1014971021	3300005459	Miscanthus Rhizosphere	KAMAILKQNNLTARDYLVGVPALRMALILAQGTLAQGSPAAGNLVASPANVAFAKANLAILKAKMDAADGLSTSRK*
Ga0070699_1019273983	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	KQNSLTARDYVVGVPALRMALMSAQGVATGPNIFASPANVAFAKSHLSELKPKMDAADGVQASK*
Ga0070686_1011822323	3300005544	Switchgrass Rhizosphere	GLKAKDYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ*
Ga0070695_1011495782	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LTARDYIVGVPTLRMALMAAQGLTTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR*
Ga0070695_1016099952	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	PKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0070696_1014568942	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VENDPKAMEILKHNELTAREYLVGVPALRMALIAAQGMARNQYIIASPANVAFAKAHMAELKPKMDSADGIRRK*
Ga0068859_1020732732	3300005617	Switchgrass Rhizosphere	RMEKDPKISSILKENGLTARDYIVGVPTLRMALMAAQGLSTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR*
Ga0068861_1018009532	3300005719	Switchgrass Rhizosphere	ALRMALILAQGTLAQGSPAAGNLVASPANVAFAKANLAILKAKMDAADGLSTSRK*
Ga0066903_1054844271	3300005764	Tropical Forest Soil	ILKQNNLTAREYGIGVPALRMALVIAQGMPFGPRIYASPANIAFAKAHLAELQPKMDAADGIAAKK*
Ga0068860_1020149821	3300005843	Switchgrass Rhizosphere	VVGVPALRMALLAAGGTPQGPTVIVSPTNLAFAKANYSTLKPKMDAADGIGGRR*
Ga0068860_1022750991	3300005843	Switchgrass Rhizosphere	QIEADPKAAAILKQNSLTARDYLTGVPALRMALMAAQGATAPNIIASPANVAFAKANLAQLKPKMDAADSMRR*
Ga0068862_1011686032	3300005844	Switchgrass Rhizosphere	KQNGLTAQEYLVGVPTLRMALIVASPGGAPAPSIYASPGNVAFAKANYAQLKPKMDAADGVSAAKK*
Ga0068862_1020798451	3300005844	Switchgrass Rhizosphere	TARDYLIGVPTLRMALMAAQGAVAPNIVASPANLAFAKANLAQLKPKMDAADGIRR*
Ga0068871_1017638931	3300006358	Miscanthus Rhizosphere	RDYLIGVPTLRMAIMAAEGNQNVVASPFNVAFAKAHLKELKPKLEEADRAAGRK*
Ga0075428_1006734752	3300006844	Populus Rhizosphere	DYIVGVPALRMALLAASGMPQGPNIIASPANVAFAKANLSVLKPKMDAADGAALRR*
Ga0075425_1021205252	3300006854	Populus Rhizosphere	LKKNQLTAKDYIVGVPALRMALLAASGMPQGANIVASPANIAFAKANLSVLKPKMDAADGAALRR*
Ga0075434_1012435921	3300006871	Populus Rhizosphere	YIVGVPTLRMALMAAQGLTTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR*
Ga0075424_1000575975	3300006904	Populus Rhizosphere	QLEGDPKAMAILKQHNLTTQDYLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK*
Ga0075419_103501062	3300006969	Populus Rhizosphere	VPALRMALLAASGMPQGANIIASPANIAFAKANLSVLKPKMDAADGAALRR*
Ga0075435_1018646262	3300007076	Populus Rhizosphere	AMAILKKNGLAAQEYLVGVPTLRMALMVAQGIPTSPTMVASPANVAFARANLTQLKPRMDAADGVPVRK*
Ga0066793_104963121	3300009029	Prmafrost Soil	DPKAMAIVKQNRLPAAEYAVGVPALRMALGVASGGPRSPNSYASPANVAFAKANLAQLKPKMDAADGMPAAKKK*
Ga0099829_101751082	3300009038	Vadose Zone Soil	MIFGLTVPALRMALMAAQGGAGSADVIASPGNVAFAKGHLAELKPKVDTADGLVRPK*
Ga0099828_101582175	3300009089	Vadose Zone Soil	QDPKISDILKQNSLTAGDYLVGVPALRMALMAAQGVAAPNIVASPANVAFAKTNLAQLKPKMDQADGLGRRP*
Ga0111539_101045641	3300009094	Populus Rhizosphere	KDNKLTADEYLVGVPALRMAMMVAQGLPPSANVVASPANVAFAKANLAELKPKMDAADAAMRPKK*
Ga0111539_135375361	3300009094	Populus Rhizosphere	AILKDNSLTARDYLVGVPALRMALMGAQGVDNAPNIAYSLANLAFAKANLKTLKPKMDAVDGGGRR*
Ga0075418_129205051	3300009100	Populus Rhizosphere	KKNQLTAKDYIVGVPALRMALLAASGMPQGPNIIASPANVAFAKANLSVLKPKMDAADGAALRR*
Ga0114129_123733252	3300009147	Populus Rhizosphere	YLVGVPALRMALMVAQGVPQSDRIIASPANVTFAKAHLAELKPKLDAIDGGRGRQ*
Ga0075423_129134112	3300009162	Populus Rhizosphere	KENGLTARDYIVGVPTLRMALMAAQGLTTPNIVASPANVAFAKANLAELKPKMDQADGLGRRR*
Ga0105242_128666692	3300009176	Miscanthus Rhizosphere	DILKRNQLTARDYLVGVPALRMALLAASGVPEGPTIIASPGNIAFAKANLSVLKPKMDAADGVGARRQ*
Ga0126379_116809431	3300010366	Tropical Forest Soil	AILKQNLLTARDYLIGVPTLRMALMAAQGATAPNIVASPANVAFAKANLAQLKPKMDAAEGIRR*
Ga0134127_112853044	3300010399	Terrestrial Soil	GLKAKDYIYGVPALRMALMAAQGLSAPTIVASPANLAFAKANLAQLKPKMEAAEGRGRQ*
Ga0134127_125373841	3300010399	Terrestrial Soil	LAQVENDPKAAVILKQNNLTAREYLIGVPVLRMGLMVAQGLPQSDRIVASPGNVAFAKAHLAELKPKMDAADGLKGRQ*
Ga0134122_112807143	3300010400	Terrestrial Soil	EKDPMAMAILKQNELTARDYMVGVPALRMALLAAQGADSPNIVASPANVAFAKANLAQLKPKLDAVDGAGK*
Ga0134123_119035042	3300010403	Terrestrial Soil	MEKDPKAMAILIQNGLTAREYLVGVPTLRMALMVAQGLPTGPNVIASPANVAFAKTNLAQLKPKMDTADGIGARK*
Ga0137389_116558811	3300012096	Vadose Zone Soil	MIFGLTVPVLRMALMAAQGGAGSADVIASPGNVAFAKGHLAELKPKVDAADGLVRPK*
Ga0137465_11188111	3300012231	Soil	PKISSILKENGLTARDYLVGVPTLRMALLVAQGLASPNIVASAANAAFAKANLAQLKPKMDQADGLARGR*
Ga0137390_113622691	3300012363	Vadose Zone Soil	PKISDILKQNSLTAGDYLVGVPALRMALMAAQGVAAPNIVASPANVAFAKTNLAQLKPKMDQADGLGRRP*
Ga0157328_10193142	3300012478	Arabidopsis Rhizosphere	NNLTARDYLVGVPALRMALMAAQGGTAPTIVASPANVAFAKANLAQLKPKMDAADGAGRR
Ga0157330_10648012	3300012514	Soil	QMEKDPKVSAILKENGLTARDYLIGVPTLRMALLSAQGLASPNIVASPANVAFAKANLAQLKPKMDQADGFGRRK*
Ga0126375_100971112	3300012948	Tropical Forest Soil	ARDYLVGVPALRMALMAAQGATAPNIVASPVNVAFAKANLAQLKPKMDAADGGGRR*
Ga0157375_107054241	3300013308	Miscanthus Rhizosphere	VEKDPKAMEILKRNSLTARDYLVGIVALRMSILAAGGASSPNIVASSANVAFAKANMSTLKPKMDAADGAGAQK*
Ga0157375_132128871	3300013308	Miscanthus Rhizosphere	NQLTSRDYIVGVPALRMALLAASGAPAGPTVIASPANVAFAKANLSVLKPKMDAADGAGARR*
Ga0157375_133148961	3300013308	Miscanthus Rhizosphere	RRSQLEKDPKATAILKQNGLTAQDYLVGVPTLRMALMVAQGAPAGPNMIASPANVAFAKTNLAQLKPKMDLADGIAAGK*
Ga0157376_129193811	3300014969	Miscanthus Rhizosphere	DYLIGVPALRMALMAAQGINSPTIIASPANVAFAKANLAPLKAKMDAADGVVSGGK*
Ga0132258_105131653	3300015371	Arabidopsis Rhizosphere	LKQNSLTARDYLIGVPALRMALMAAQGAAGANIVASPANVAFAKANLAQLKPKMDAADGR
Ga0132258_110081502	3300015371	Arabidopsis Rhizosphere	MLKTIHLLTPREYVVGVPTLRTALMAAQGRSGAGVTVSPANLAFAKARLAELKPKMDAADGLAGRK*
Ga0132258_125009641	3300015371	Arabidopsis Rhizosphere	DPKAAAILKQNSLTARDYLIGVPTLRMALMAAQGAASPNIVASPANLAFAKTNLAQLKPKMDAADGLRR*
Ga0132257_1013601161	3300015373	Arabidopsis Rhizosphere	EADPKAAAILKQNSLTARDYLIGVPALRMALIAAQGTTAPNIVASPANVAFAKANLAQLKPKMDAADGLRR*
Ga0132257_1041415611	3300015373	Arabidopsis Rhizosphere	NDLTARDYIVGVPTLRMALFAAQGLNTPNIVASPANVAFAKANLATLKPKMDQADGAGRRQ*
Ga0132255_1011343631	3300015374	Arabidopsis Rhizosphere	KAADILKQNSLSARDYLIGVPALRMALMQAQGATAPNIVASPANVKFAKANLAELKPKMDAADGIRR*
Ga0187765_107690132	3300018060	Tropical Peatland	LTARDYLIGVPALRMALLAAQGSASPNIVASPANIAFAKANLALLKPKMDAADGIQR
Ga0190274_116980882	3300018476	Soil	MAIVKQNSLTSQDYLVGVPALRMALMAAQGLANSPNVIASPANVAFAKANLSELKPKMDAADGVAGRK
Ga0173481_104083941	3300019356	Soil	AQEYLVGVPTLRMAMMIAEGVPASAKVVASPANVAFAKANLAELTPKMNAAEGALRPKK
Ga0187894_101034402	3300019360	Microbial Mat On Rocks	LAENETQVGVPTLRMALMAAQGAVNSPNVIASPANLAFARANLAQLKPKVDAADGLRRPK
Ga0173479_103655501	3300019362	Soil	ILKQNSLTARDYLIGVPALRMALMRAQGATAPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0210399_107679491	3300020581	Soil	QVEKDPTAMSILKQNGLTPREYLVGVPTLRMALMAARGMPTGRNITASPANVAFAKANLAELKPKMDKVDGLQ
Ga0210380_100682701	3300021082	Groundwater Sediment	DYLVGVPALRMALMAAQGLANSPNVIASPANVAFAKANLSELKPKMDAADGVAGRK
Ga0210380_106046101	3300021082	Groundwater Sediment	KANGLTAQDYLVGVPALRMALMAAQGPADAPNLAVSPANLAFGRANLAQLKPKLDAADGIKPTKK
Ga0247793_10610811	3300023066	Soil	NNLTTRDYLIGVPALRMALMAAQGATAPNIVASPANVAFAKTNLAQLKPKMDAADGIRR
Ga0209640_107251491	3300025324	Soil	LKKHGLTAREYVVGVPALRMALARAQSGDALGSEALVVSADNLAFARANLAELKPKLDAAGGITRP
Ga0207682_101992341	3300025893	Miscanthus Rhizosphere	RRSQLENDPKAMAILKQNGLTAQDYLVGVPTLRMALMVAQGAPAGPNMIASPANVAFTKANLAQLKPKMDLADGIGARK
Ga0207682_102010981	3300025893	Miscanthus Rhizosphere	VTPHGLKAKDYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ
Ga0207687_115416731	3300025927	Miscanthus Rhizosphere	TVEKDPKAMAILKQNGLTAQEYLVGVPTLRMALIVASPGGAPAPSIYASPANVAFAKANYAQLKPKMDAADGVSAAKK
Ga0207709_104243221	3300025935	Miscanthus Rhizosphere	AMEILKRNELTAREYLVGVPALRMALIAGQGLARNQYIIASPANVAFAKAHLAELKPKMDAADGIRRK
Ga0207709_112199781	3300025935	Miscanthus Rhizosphere	ILKQNSLTARDYLVGVPALRMALMAAQGATAPNVVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0207670_102629611	3300025936	Switchgrass Rhizosphere	KDYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ
Ga0207670_105903822	3300025936	Switchgrass Rhizosphere	QNQLTAKEYLVGVPTLRMALLAASGTQSPSIVASPANIAFAKANYAALKPKMDAADTGH
Ga0207711_116202182	3300025941	Switchgrass Rhizosphere	TAAILKDNSLTARDYLVGVLALRMALMGAQGAESGPTIAYSPANLAFAKANLKTLKPKMDAVDGGGRR
Ga0207640_106618171	3300025981	Corn Rhizosphere	DYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ
Ga0207658_119347911	3300025986	Switchgrass Rhizosphere	TPRGLNAKDYIYGVPALRMALMAAQGLSAPTIVASPANVAFAKANLAQLKPKMEAAEGRGRQ
Ga0207703_111955062	3300026035	Switchgrass Rhizosphere	LTARDYLVGVPTLRMALMAAQGVEAPTVVASPSNVAFAKANLTQLKPKMDQADGLVRRR
Ga0207708_113630242	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PTSAAILKRNGLTAREYLVGVPALRMAMMSAQGIQAPNIVASPANVAFAKANLAELEPKWAAANGLSPAK
Ga0207676_119207262	3300026095	Switchgrass Rhizosphere	VREAVKYLNLVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGI
Ga0207675_1019382811	3300026118	Switchgrass Rhizosphere	MAQIDKDPKASDILKKNQLTSRDYIVGVPTLRMALMAASGAPAGPTVIASPANVAFAKANLSVLKPKMDAADGAGARR
Ga0207683_115028591	3300026121	Miscanthus Rhizosphere	LTARDYIVGVPALRMALLAAGGRTSPTIVASPANVSFAKANLSVLKPKMDTADGLSAPQG
Ga0209971_10195372	3300027682	Arabidopsis Thaliana Rhizosphere	EKDPNAMDILKRNSLTARDYIVGVPALRMALLAAGGRTSPTIVASPANVSFAKANLSVLKPKMDTADGLSAPQGK
Ga0209814_105426292	3300027873	Populus Rhizosphere	DYLVGVPTLRMALLVAQGLASPNIVASPANAAFAKANLAQLKPKMDQADGLARGR
Ga0209283_107590952	3300027875	Vadose Zone Soil	DPKISDILKQNSLTAGDYLVGVPALRMALMAAQGVAAPNIVASPANVAFAKTNLAQLKPKMDQADGLGRRP
Ga0209069_109494572	3300027915	Watersheds	MALMVAQGRPQSDRIIASPANVAFAKAHLAELKPRMEAADGVKGRQ
Ga0170834_1038692053	3300031057	Forest Soil	QNGLTARDYVVGVPALRMAMMAAQGAPAGPYIIASPANVAFAKAHLAELKPKMDAADGIRPRK
Ga0310888_104666851	3300031538	Soil	YLVGVPTLRMAMMIAEGVPASAKVVASPANVAFAKANLAELTPKMNAAEGALRPKK
Ga0310888_106882392	3300031538	Soil	DYLVGVPALRMALMAAQGLASSPNVIASPANVAFAKANLSELKPKMDAADGVAGRK
Ga0307468_1023126442	3300031740	Hardwood Forest Soil	KKNGLTAREYLVGVPTLRMALMTAQGLTSPNVVASPANVAFAKANLAELKPKMEQADLGGLGRGK
Ga0318520_103692912	3300031897	Soil	REYLVGVPALRMALHKAQLGAGPGSDALIVSPDNLAFAKANLAELKPKLDAADSLR
Ga0310885_109275451	3300031943	Soil	EKDPKTAAILKDNSLTARDYLVGVLALRMALMGAQGAESGPTIAYSPANLAFAKANLKTLKPKMDAVDGGGRR
Ga0310902_106413842	3300032012	Soil	LVGVPALRMALMAAQGLTAPNIIASPANVAFAKANLATLKPKMDAADGIGRGK
Ga0310902_106789282	3300032012	Soil	RDYLIGVPALRMALMRAQGATAPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0310889_102019241	3300032179	Soil	YLIGVPTLRMALMAAQGATSPNIVASPANVAFAKANLAQLKPKMDAADGIRR
Ga0310889_106630772	3300032179	Soil	YLTGVPALRMALMAAQGATGPNIVASPANVAFGKANLAQLKPKMDAADGIRR
Ga0335085_101660501	3300032770	Soil	GLTAREYVIGVPALRMALMAAQGIPPGPKIIVSPANLEFAKANLAQLKPKMDAADGIRSG
Ga0335084_109002541	3300033004	Soil	REYLIGVPALRMALLAAQGLATGPRLVASPANIAFAKANLAELKPKMDAADGMRPGR
Ga0318519_108645352	3300033290	Soil	DYLVGVPALRMALLAAQGRTSPMIVASPANLAFAKANLAQLKPKLDAADLGR
Ga0310810_110625173	3300033412	Soil	GVPTLRMAMMIAEGVPASAKVVASPANVAFAKANLAELTPKMNAAEGALRPKK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082743

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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