Metagenome / Metatranscriptome Family F082730

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082730
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	97 residues
Representative Sequence	MPSIPKVKFKFKKGIHNIWLTNKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEFEAGTNNKKKVPINGNTKINTSKLDMFNKKKSNINIL
Number of Associated Samples	102
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.17 %
% of genes near scaffold ends (potentially truncated)	45.13 %
% of genes from short scaffolds (< 2000 bps)	68.14 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.212 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (16.814 % of family members)
Environment Ontology (ENVO)	Unclassified (30.973 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (65.487 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.21% β-sheet: 0.00% Coil/Unstructured: 74.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00361	Proton_antipo_M	38.94
PF02790	COX2_TM	3.54
PF00116	COX2	2.65
PF00416	Ribosomal_S13	1.77
PF00338	Ribosomal_S10	1.77
PF13631	Cytochrom_B_N_2	0.88
PF00510	COX3	0.88
PF00420	Oxidored_q2	0.88
PF00252	Ribosomal_L16	0.88
PF10588	NADH-G_4Fe-4S_3	0.88
PF00253	Ribosomal_S14	0.88
PF00902	TatC	0.88
PF00137	ATP-synt_C	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	6.19
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	2.65
COG0051	Ribosomal protein S10	Translation, ribosomal structure and biogenesis [J]	1.77
COG0099	Ribosomal protein S13	Translation, ribosomal structure and biogenesis [J]	1.77
COG0197	Ribosomal protein L16/L10AE	Translation, ribosomal structure and biogenesis [J]	0.88
COG0199	Ribosomal protein S14	Translation, ribosomal structure and biogenesis [J]	0.88
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	0.88
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	0.88
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
All Organisms	root	All Organisms	47.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
cellular organisms	root	All Organisms → cellular organisms	47.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	46.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	37.17 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	35.40 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	35.40 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	35.40 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	16.81 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Rhizosoleniophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae	12.39 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Rhizosoleniales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales	12.39 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Rhizosoleniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae	12.39 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia	12.39 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
malvids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
Brassicales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
Brassicaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
Camelineae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
Arabidopsis	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.21 %
Proboscia inermis	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	12.39 %
Arabidopsis thaliana	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis → Arabidopsis thaliana	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352005\|2199955366	All Organisms → cellular organisms → Eukaryota	4110	Open in IMG/M
3300000120\|SA_S2_NOR13_50mDRAFT_c1043528	Not Available	587	Open in IMG/M
3300000124\|BS_KBA_SWE12_21mDRAFT_c10004290	All Organisms → cellular organisms → Eukaryota	4959	Open in IMG/M
3300000241\|BS_KBA_SWE21_205mDRAFT_10107646	Not Available	599	Open in IMG/M
3300000422\|BB_Man_A_Liq_inBBDRAFT_1027326	Not Available	525	Open in IMG/M
3300001282\|B570J14230_10000228	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	21407	Open in IMG/M
3300002154\|JGI24538J26636_10084128	Not Available	759	Open in IMG/M
3300003346\|JGI26081J50195_1000140	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	30420	Open in IMG/M
3300003682\|Ga0008456_1006343	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1439	Open in IMG/M
3300003683\|Ga0008459J53047_1006416	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1531	Open in IMG/M
3300003683\|Ga0008459J53047_1028726	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1452	Open in IMG/M
3300003860\|Ga0031658_1000089	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	13766	Open in IMG/M
3300003860\|Ga0031658_1020449	All Organisms → cellular organisms → Eukaryota → Sar	1112	Open in IMG/M
3300004097\|Ga0055584_100150866	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	2343	Open in IMG/M
3300005758\|Ga0078117_1022198	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	6234	Open in IMG/M
3300005805\|Ga0079957_1137936	All Organisms → cellular organisms → Eukaryota	1260	Open in IMG/M
3300005955\|Ga0073922_1036863	Not Available	609	Open in IMG/M
3300006014\|Ga0073919_1002009	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	2044	Open in IMG/M
3300006384\|Ga0075516_1395801	Not Available	789	Open in IMG/M
3300006384\|Ga0075516_1421896	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1400	Open in IMG/M
3300006390\|Ga0075509_1513330	Not Available	619	Open in IMG/M
3300006396\|Ga0075493_1057380	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	3625	Open in IMG/M
3300006484\|Ga0070744_10014429	All Organisms → cellular organisms → Eukaryota	2343	Open in IMG/M
3300006868\|Ga0075481_10267690	Not Available	600	Open in IMG/M
3300006875\|Ga0075473_10283217	Not Available	671	Open in IMG/M
3300007177\|Ga0102978_1148797	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	4340	Open in IMG/M
3300007600\|Ga0102920_1170107	Not Available	699	Open in IMG/M
3300007706\|Ga0102899_1012089	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	2005	Open in IMG/M
3300007716\|Ga0102867_1139353	Not Available	654	Open in IMG/M
3300007725\|Ga0102951_1113907	Not Available	765	Open in IMG/M
3300007955\|Ga0105740_1076686	Not Available	564	Open in IMG/M
3300008115\|Ga0114348_1000091	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	42116	Open in IMG/M
3300008116\|Ga0114350_1013562	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	9302	Open in IMG/M
3300008930\|Ga0103733_1036232	Not Available	778	Open in IMG/M
3300008996\|Ga0102831_1021633	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	2199	Open in IMG/M
3300009024\|Ga0102811_1337374	Not Available	567	Open in IMG/M
3300009432\|Ga0115005_10520435	Not Available	949	Open in IMG/M
3300009436\|Ga0115008_10132659	Not Available	1825	Open in IMG/M
3300009436\|Ga0115008_10170621	Not Available	1573	Open in IMG/M
3300009544\|Ga0115006_10981497	Not Available	749	Open in IMG/M
3300009608\|Ga0115100_10464887	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1566	Open in IMG/M
3300010885\|Ga0133913_10622675	All Organisms → cellular organisms → Eukaryota	2831	Open in IMG/M
3300012408\|Ga0138265_1029156	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1558	Open in IMG/M
3300012408\|Ga0138265_1102164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3427	Open in IMG/M
3300012412\|Ga0138266_1116375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3420	Open in IMG/M
3300012416\|Ga0138259_1728737	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis → Arabidopsis thaliana	1485	Open in IMG/M
3300012777\|Ga0138292_1021374	Not Available	509	Open in IMG/M
3300012935\|Ga0138257_1531028	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → malvids → Brassicales → Brassicaceae → Camelineae → Arabidopsis → Arabidopsis thaliana	1472	Open in IMG/M
3300012963\|Ga0129340_1121353	Not Available	533	Open in IMG/M
3300013295\|Ga0170791_14169396	Not Available	531	Open in IMG/M
3300018515\|Ga0192960_100547	Not Available	1501	Open in IMG/M
3300018873\|Ga0193553_1119411	Not Available	645	Open in IMG/M
3300018981\|Ga0192968_10006457	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	2798	Open in IMG/M
3300018981\|Ga0192968_10051896	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1127	Open in IMG/M
3300019191\|Ga0180035_1105834	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	2833	Open in IMG/M
3300019200\|Ga0180036_1094310	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	3246	Open in IMG/M
3300019207\|Ga0180034_1079843	Not Available	709	Open in IMG/M
3300019707\|Ga0193989_1031351	Not Available	617	Open in IMG/M
3300019717\|Ga0193972_1001049	Not Available	1928	Open in IMG/M
3300019721\|Ga0194011_1000400	Not Available	2538	Open in IMG/M
3300019722\|Ga0193971_1008428	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1087	Open in IMG/M
3300019729\|Ga0193968_1056561	Not Available	549	Open in IMG/M
3300019730\|Ga0194001_1027522	Not Available	680	Open in IMG/M
3300019731\|Ga0193982_1060360	Not Available	530	Open in IMG/M
3300019737\|Ga0193973_1000246	Not Available	3744	Open in IMG/M
3300019737\|Ga0193973_1002785	Not Available	1453	Open in IMG/M
3300020205\|Ga0211731_11697698	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1197	Open in IMG/M
3300020496\|Ga0208230_1000004	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	45386	Open in IMG/M
3300021323\|Ga0210295_1050156	Not Available	512	Open in IMG/M
3300021368\|Ga0213860_10074673	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1466	Open in IMG/M
3300021424\|Ga0194117_10159367	All Organisms → cellular organisms → Eukaryota	1143	Open in IMG/M
3300021425\|Ga0213866_10131371	Not Available	1341	Open in IMG/M
3300021497\|Ga0193945_1044232	Not Available	568	Open in IMG/M
3300021849\|Ga0210304_1017008	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1560	Open in IMG/M
3300021957\|Ga0222717_10000527	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	32819	Open in IMG/M
3300021957\|Ga0222717_10313556	Not Available	891	Open in IMG/M
3300021959\|Ga0222716_10046972	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	3073	Open in IMG/M
3300021960\|Ga0222715_10417874	Not Available	729	Open in IMG/M
3300021960\|Ga0222715_10499506	Not Available	646	Open in IMG/M
3300021964\|Ga0222719_10794947	Not Available	521	Open in IMG/M
3300022206\|Ga0224499_10025453	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1866	Open in IMG/M
3300022217\|Ga0224514_10000604	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	10147	Open in IMG/M
3300022308\|Ga0224504_10000429	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	18765	Open in IMG/M
3300022308\|Ga0224504_10082530	Not Available	1295	Open in IMG/M
3300022375\|Ga0210313_1013455	Not Available	949	Open in IMG/M
(restricted) 3300022913\|Ga0233404_10101766	All Organisms → cellular organisms → Eukaryota → Sar	679	Open in IMG/M
(restricted) 3300024059\|Ga0255040_10094786	Not Available	1157	Open in IMG/M
(restricted) 3300024062\|Ga0255039_10097219	Not Available	1171	Open in IMG/M
3300024346\|Ga0244775_10268205	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1420	Open in IMG/M
3300025653\|Ga0208428_1157222	Not Available	605	Open in IMG/M
3300025684\|Ga0209652_1117530	Not Available	741	Open in IMG/M
3300025767\|Ga0209137_1029918	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	2924	Open in IMG/M
3300027159\|Ga0208020_1024493	Not Available	1177	Open in IMG/M
3300027193\|Ga0208800_1043953	Not Available	605	Open in IMG/M
3300027198\|Ga0208163_1044682	Not Available	722	Open in IMG/M
3300027254\|Ga0208177_1000136	All Organisms → cellular organisms → Eukaryota	7962	Open in IMG/M
3300027315\|Ga0208949_1014451	Not Available	1683	Open in IMG/M
3300027406\|Ga0208965_1051070	Not Available	918	Open in IMG/M
3300027501\|Ga0208948_1022310	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Rhizosoleniophycidae → Rhizosoleniales → Rhizosoleniaceae → Proboscia → Proboscia inermis	1453	Open in IMG/M
3300027553\|Ga0208947_1026380	Not Available	1537	Open in IMG/M
3300027753\|Ga0208305_10101615	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1076	Open in IMG/M
3300027753\|Ga0208305_10252801	Not Available	625	Open in IMG/M
3300027757\|Ga0208671_10043851	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1669	Open in IMG/M
3300027806\|Ga0209985_10053512	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	2234	Open in IMG/M
3300027833\|Ga0209092_10049369	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	2614	Open in IMG/M
3300027836\|Ga0209230_10142297	All Organisms → cellular organisms → Eukaryota	1362	Open in IMG/M
3300028329\|Ga0210315_1019284	Not Available	846	Open in IMG/M
3300031786\|Ga0315908_10177867	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1758	Open in IMG/M
3300034105\|Ga0335035_0712117	Not Available	513	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.23%
Terrestrial	Environmental → Terrestrial	1.77%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	70.80%
Freshwater	Environmental → Aquatic → Freshwater	25.66%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.77%
Soil	Environmental → Terrestrial → Soil	1.77%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	24.78%
Unclassified	Environmental → Aquatic → Marine → Unclassified	16.81%
Oceanic	Environmental → Aquatic → Marine → Oceanic	10.62%
Lake	Environmental → Aquatic → Freshwater → Lake	9.73%
Coastal	Environmental → Aquatic → Marine → Coastal	9.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.19%
Sediment	Environmental → Aquatic → Marine → Sediment	3.54%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.77%
Strait	Environmental → Aquatic → Marine → Strait	1.77%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.77%
Sand	Environmental → Terrestrial → Soil → Sand	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.89%
Inlet	Environmental → Aquatic → Marine → Inlet	0.89%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.89%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	16.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	16.81%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	10.62%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	9.73%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	9.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.85%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	7.08%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	3.54%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.65%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	1.77%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.77%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.77%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.89%
Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Sediment	0.89%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.89%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.89%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	16.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	8.85%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.08%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	6.19%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.31%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.31%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	5.31%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.42%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	4.42%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	3.54%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.77%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.77%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.77%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.77%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.77%
Marine	Environmental → Aquatic → Marine → Wetlands → Sediment → Marine	1.77%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.77%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.77%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	1.77%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.89%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.89%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.89%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.89%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.89%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.89%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.89%
Bioluminescent Bay	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Bioluminescent Bay	0.89%
Ice Edge, Mcmurdo Sound, Antarctica	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ice Edge, Mcmurdo Sound, Antarctica	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352005	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300000120	Marine microbial communities from chronically polluted sediments in Adventfjord, Norway - Svalbard Archipelago station 2 sample NOR 13_50m	Environmental	Open in IMG/M
3300000124	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBA sample SWE 12_21m	Environmental	Open in IMG/M
3300000241	Marine microbial communities from chronically polluted sediments in the Baltic Sea - site KBB sample SWE 21_20.5m	Environmental	Open in IMG/M
3300000422	Marine sediment microbial community from La Parguera, Puerto Rico - BB Mangrove A Sediment	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002154	Marine eukaryotic phytoplankton communities from the South Atlantic Ocean - 30m ANT-15 Metagenome	Environmental	Open in IMG/M
3300003346	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA	Environmental	Open in IMG/M
3300003554	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_04_M0_20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003682	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_03_M0_10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003683	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_54_BLW_10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300003860	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005955	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_23-Sept-14	Environmental	Open in IMG/M
3300006014	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T3_25-Nov-14	Environmental	Open in IMG/M
3300006384	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006390	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006396	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007177	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projects	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300007716	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-3	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental	Open in IMG/M
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008930	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 1B	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009024	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300009599	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009608	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012408	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA23.A_192.20151118 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012412	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA24.B_192.20151118 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012416	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA9.A_24.20151111 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012777	Freshwater microbial communities from Lake Simoncouche, Canada - S_140709_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012935	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA5.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012963	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300018515	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_083 - TARA_N000001372 (ERX1782216-ERR1712231)	Environmental	Open in IMG/M
3300018873	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_093 - TARA_N000001098	Environmental	Open in IMG/M
3300018981	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001440 (ERX1782157-ERR1712238)	Environmental	Open in IMG/M
3300019191	Estuarine microbial communities from the Columbia River estuary - R.880 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019200	Estuarine microbial communities from the Columbia River estuary - R.1175 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019207	Estuarine microbial communities from the Columbia River estuary - R.871 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019707	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_0-1_MG	Environmental	Open in IMG/M
3300019717	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_8-9_MG	Environmental	Open in IMG/M
3300019721	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLC_7-8_MG	Environmental	Open in IMG/M
3300019722	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_7-8_MG	Environmental	Open in IMG/M
3300019729	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_4-5_MG	Environmental	Open in IMG/M
3300019730	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_7-8_MG	Environmental	Open in IMG/M
3300019731	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_3-4_MG	Environmental	Open in IMG/M
3300019737	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_9-10_MG	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020496	Freshwater microbial communities from Lake Mendota, WI - 01NOV2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021323	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R9.63AS (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021353	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021424	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021497	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_0-1_MG	Environmental	Open in IMG/M
3300021849	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1037 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022206	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_24	Environmental	Open in IMG/M
3300022217	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_24	Environmental	Open in IMG/M
3300022308	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24	Environmental	Open in IMG/M
3300022375	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022913 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_2_MG	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300024062 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_1	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025684	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA (SPAdes)	Environmental	Open in IMG/M
3300025767	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300027159	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573 (SPAdes)	Environmental	Open in IMG/M
3300027193	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)	Environmental	Open in IMG/M
3300027198	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753 (SPAdes)	Environmental	Open in IMG/M
3300027254	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3 (SPAdes)	Environmental	Open in IMG/M
3300027315	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_03_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027406	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_07_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027501	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_17_M020 (SPAdes)	Environmental	Open in IMG/M
3300027553	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_04_M0_20 (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental	Open in IMG/M
3300027806	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028329	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Washington, United States ? R1276 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
2200160792	2199352005	Freshwater	MPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMEYKKQDTFKAMDFNNK*FEAGTNNRRKTPSKGNTIINTSKLVILNKKKSNINIL
SA_S2_NOR13_50mDRAFT_10435282	3300000120	Marine	MKKSEIPSIPKVKFKFEKGIHNNLLTNKEPVDLLKKTHKNKEITYKKQDTFKAKDFNSEFDAGTNNKKKVPIKGNTIMKTSKLVTFNEKKSNINIL*
BS_KBA_SWE12_21mDRAFT_100042902	3300000124	Marine	MKNNEMPSIPKLKLRFKKGIHNNLLTNWKEPIDLLKNTHKNKEITYKKQEVFKAIAFNAEFEEGTNNNKKVPIKGNTKIRINKFVTFNKKKSNINIL
BS_KBA_SWE21_205mDRAFT_101076463	3300000241	Marine	KVVKRIKNSEIPSMPKLKLKFKKGIHNSLLTNKEPMDLLKKTHKNKEITYNKQDTFKAIDFSKEFEEGTNNNKNVPIKGKTKTKINKFVTFNKKKFNIYIL*
BB_Man_A_Liq_inBBDRAFT_10273263	3300000422	Bioluminescent Bay	PILKLKFKKGIHNSLFTNKEPTDLLKKTHKNKEITYSKQDTFNAIDFNKKFEEGTKSKKNVPIKGNTKITINKFAAFNKKKSNIHIL*
B570J14230_1000022838	3300001282	Freshwater	MPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMEYKKQDTFKAMDFNNKFEAGTNNRRKTPSKGNTIINTSKLVILNKKKSNINIL
JGI24538J26636_100841282	3300002154	Marine	MKKSETPSIPKLKFKFKKGIHNNLLTNKEPIDLLKKNHKNKETTYKKQDVFKAISFNKEFEVGTNNNKKIPIKGNTIRKTNKFDTSNHEKFNIKNLEVI
JGI26081J50195_100014054	3300003346	Marine	MHRKINKVVKSIKNSEIPSTPKLKLKFKKGIHNNLLTNKEPIDLLKKTHKNKETTYNRQDTFKAIDFNKEWFEEGINNSKNVPIKGNTKTKINKFVTFNKKKSNIYIL
Ga0008451J51688_1082042	3300003554	Seawater	MPSIPKVKFKFKKSIHNIWLTNKEPIDLLKKTHKNKEITYDKQDTFKATNFNNEFEAGTNNKKKVPVNGNTKNNTEIEFWLRMIIKELLSI
Ga0008456_10063431	3300003682	Seawater	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIWLTNKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEFEAGTNNKKKVPINGNTKIN
Ga0008459J53047_10064161	3300003683	Seawater	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIWLTNKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEFEAGTNNKKKVPINGNTKINTSKLDMFNKKKSNINIL*
Ga0008459J53047_10287261	3300003683	Seawater	MKKREIPSIPKLKFKFKNGIHNNLFTNKDPMDLLKKTHKSIELKYTQQETFKAKDFNSELDVGTNNNNKVPAKGKIMIKINRFV
Ga0031658_100008926	3300003860	Freshwater Lake Sediment	MFVSTLVQLINIHKKINKVVKRIKKSEIPSTPKLKFKFKKGIHQNLLTNKEPIDLLKKIHKNKETINTKQDIFRAIDFNNEFEAGTNSKRKTPIKGSVKLNTSKLVIFNKKKSNINIL
Ga0031658_10204493	3300003860	Freshwater Lake Sediment	MHKKINNVVKRIKKSEIPSTPKLKFKFRKGIHQNLLTNKEPIDLLKKTHKNRETTYEKQDIFRAIDFNNEWLEAETNNRRKTPIKGNINRITSKLVIFNKKKSNINIL
Ga0055584_1001508664	3300004097	Pelagic Marine	MPSIPKLKFKFKKGTHHSLLTNKEPTDLLKKTHKNNEITYKKQDTFKAIDFNKEFEAGTNNRKKILIIGNTIIKTSKFVTLKKKKSNINIL*
Ga0078117_10221988	3300005758	Lake Water	VVKRIKNNEIPSIPKLKLKFKKGIHNSLLTNKEPMDLLKKTHKNKEITYNKQDTFKAIDFSKEFEEGTNNNKNVPIKGNTKTKINKFVTFNKKKFNIHIL*
Ga0079957_11379363	3300005805	Lake	KLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMEYKKQDTFKAMDFNNKFEAGTNNRRKTPTKGNTIINTSKLVIFNKKKSNINIL
Ga0073922_10368631	3300005955	Sand	KINNVVKRIKKSEIPSTPKLKFKFRKGIHQNLLTNKEPIDLLKKTHKNKETTYEKQDTFKAIDFNNEWLEAGTNNRRKTPIKGNIKMITSKLVIFNKKKSNINIL
Ga0073919_10020092	3300006014	Sand	MHKKINNVVKRIKKSEIPSTPKLKFKFRKGIHQNLLTNKEPIDLLKKTHKNKETTYEKQDTFKAIDFNNEWLEAGTNNRRKTPIKGNIKMITSKLVIFNKKKSNINIL
Ga0075516_13958012	3300006384	Aqueous	MHKKISNVVKRIKNNEMPSTPMLKLRFKRGIHNILLTN*KEPVDLLKKTHKNKEITYTTQEIFKAMAFNIEKLKEGVHNSIKTPIKGNINKRISKFEVF
Ga0075516_14218961	3300006384	Aqueous	MPSTPTLKLRFKKGTHNILLTN*KEPLDLLKKTHKNKEITYTTQEIFKAMAFNIEMLEDGVHNSIKTPIKGNINKRISKFE
Ga0075509_15133304	3300006390	Aqueous	HKKINKVVKRTKNSDIPSTPMLKFKFKKGIHNSLLTNKEPIDLLKKTHKSNDITYVKQDTFNAIDFNNEWFEEGAHNKKKVPIKGNTVIKTNKLAIFNKKKFNINTL
Ga0075493_10573802	3300006396	Aqueous	MFDLTLVQLINMHRKINKVVKSIKNSEIPSTPKLKLKFKKGIHNNLLTN*KEPIDLLKKTHKNKETTYNRQDTFKATDFNKEWFEEGINNSKNVPIKGNTKTKINKFVTFNKKKSNIYIL
Ga0070744_100144294	3300006484	Estuarine	MPSIPKLKFKFKKGIHNNLLTNKEPTDLLKKTHKNKEIEYKKQDTFKAMDFNNKFEAGTNNRRKTPTKGNTIIKTSKLVIFNKKKSNINIL*
Ga0075481_102676901	3300006868	Aqueous	SIPKLKLKFKKGIHSSLLTNKELIDLLKKTHKNKEIIYKKQDTFKAIDFSNEFEAGTNSKRKVPIKGNNMIKTNKLGTSNNNKSNINTL*
Ga0075473_102832172	3300006875	Aqueous	MPSTPRLKLKFKKGIHNSLLTNWKEPTDLLKKTHKNNETTYNKQDTFKAIDFNKKFEEGTSNRKNVPIKGNTKTKINKFVTFNKKKSNIHIL
Ga0102978_11487972	3300007177	Freshwater Lake	MFKKGIQNSLLTNKEPIDLLKKTHKNKEIIYTIQEIFKATVFNIEQLEEGIHNNKKVPIKGTIKIQISKFVAFNKKRSNINIL
Ga0102920_11701074	3300007600	Estuarine	FRKGIHQNLLTNKEPIDLLKKTHKNRETTYEKQDIFRAIDFNNEWLEAETNNRRKTPIKGNINRITSKLVIFNKKKSNINIL
Ga0102899_10120892	3300007706	Estuarine	MHKKINNVVKRIKKSEIPSTPKLKFKFRKGIHQNLLTNKEPMDLLKKTHKNKEITYNKQDTFKAIDFSKEFEEGTNNNKNVPIKGNTKTKINKFVTFNKKKFNIHIL*
Ga0102867_11393533	3300007716	Estuarine	PKLKFKFRKGIHQNLLTNKEPIDLLKKTHKNRETTYEKQDIFRAIDFNNKFEEGTNNKRKTPIKGNTIMNTSKLVIFNKKKSNINIL*
Ga0102951_11139072	3300007725	Water	MFILTLVQLINIHKKINKVVKRIKNNEIPSIPILKLKFKKGIHNSLLTNKEPTDLLKKTHKNKEITYSKQDTFNAIDFNKKFEEGTKSKKNVPIKGNTKITINKFAAFNKKKSNIHIL
Ga0105740_10766863	3300007955	Estuary Water	IKKSEMPSIPKLKFKFKKGIHNNLLTNKEPTDLLKKTHKNKEIEYKKQDTFKAMDFNNKFEAGTNNRRKTPTKGNTIINTSKLVIFNKKKSNINIL*
Ga0114348_100009142	3300008115	Freshwater, Plankton	MPSIPKLKFKFKKGIHNNLLTNKEPTDLLKKTHKNKEIEYKKQDTFKAMDFNNKFEAGTNNRRKTPTKGNTIINTSKLVIFNKKKSNINIL*
Ga0114350_101356211	3300008116	Freshwater, Plankton	IPSIPKLKLKFKKGIHNSLLTNKEPMDLLKKTHKNKEITYNKQDTFKAIDFSKEFEEGTNNNKNVPIKGKTKTKINKFVTFNKKKFNIYIL*
Ga0103733_10362321	3300008930	Ice Edge, Mcmurdo Sound, Antarctica	MFVLTLVQLINIHKKINNVVKRMKKSDMPSIPRLKFKFKKGIHNNLLTNKEPIELLKKNHKNKEITYKKQDVFKAISFNKEFEVGTNNNKKVPIKGSTIRKTNKFDISNHEKFNINTL
Ga0102831_10216334	3300008996	Estuarine	VVKRIKNNEIPSIPKLKLKFKKGIHNSLLTNKEPMDLLKKTHKNKEITYNKQDTFKAIDFSKEFEEGTNNNKNVPIKGNTKTKINKFVTFNKKK
Ga0102811_13373743	3300009024	Estuarine	KFKKGIHNNLLTNKEPTDLLKKTHKNREIEYKKQETFKAIDFNNKFEAGTNNIRKTPIKGNTNINTSKLVIFKKKKSNINIL*
Ga0115005_105204352	3300009432	Marine	MKKSEIPSIPTLKFKFEKGIHSNLLTNKEPVDLLKKTHKNKEITYKKQDTFKARDFNNEFDADTNNKQKVPIKGNTIMKISKLVTFNEKKSNINIL*
Ga0115008_101326591	3300009436	Marine	MKKSEIPSIPKLKFKFKNGIHNNLFTNKEPIDLLKKTHKNTEIIYTKQETFKAKSFKNELEAGTHNKKKVPTKGKIMIKTNKFVQLNKQKSNINIL*
Ga0115008_101706211	3300009436	Marine	MKKSETPSIPKLKFKFKKGIHNNLLTNKEPIDLLKKNHKNKETTYKKQDVFKAISFNKEFEVGTNNNKKIPIKGNTIRKTNKFDTSNHEK
Ga0115006_109814973	3300009544	Marine	MKKREIPSIPKLKFKFKNGIHNNLFTNKDPMDLLKKTHKSIELKYTQQETFKAKDFNSELDVGTNNNNKVPAKGKIMIKINRFVTLNKKRSNINIL*
Ga0115103_14014641	3300009599	Marine	MPRVKLKFKKGIHNNLLTN*KEPIDLLKKTQKNKEATYNRQDTFKAIDFNKKEFREGTNNKKNVPIKGNIKTKINKF
Ga0115100_104648873	3300009608	Marine	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIWLTNKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEFEEGTNNKKKVPINGNTKINTSKLDMFNKKKSNINIL*
Ga0133913_106226756	3300010885	Freshwater Lake	FRFKKGIHNNLLTSKDPTDLLKKTHKNKETEYKKHDTFKAMDFSNEFEAGTNNRKKTPIKGSTSINTSKLDIFNKKKSNINIL*
Ga0138265_10291562	3300012408	Polar Marine	MPSIPKVKFKFKKGIHNIWLTNKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEFEAGTNNKKKVPINGNTKINTSKLDMFNKKKSNINIL*
Ga0138265_11021645	3300012408	Polar Marine	MPSIPKLKFKFKKGIHNSLLTNWKEPIDLLKKNHKNKEITYKKQDTFKAMSFNKEWFEAGTKNSEKVPIKGSIIRKTSKFDTSNHKKFNINTL*
Ga0138266_11163755	3300012412	Polar Marine	MPSIPKLKFKFKKGIHNSLLTNWKEPIDLLKKNHRNKEITYKKQDTFKAMSFNKEWFEAGTKNSEKVPIKGSIIRKTSKFDTSNHKKFNINTL*
Ga0138259_17287373	3300012416	Polar Marine	MPSIPKVKFKFKKGIHNIWLTNKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEFEAGTNNKKKVPINGNTKINTSKLDMFNKKKSNIN
Ga0138292_10213741	3300012777	Freshwater Lake	MPSTPKLKFRFKKGIHNNLLTSKDPTDLLKKTHKNKETEYKKHDTFKAMDFSNEFEAGTNNRKKTPIKGSTSINTSK
Ga0138257_15310281	3300012935	Polar Marine	MPSIPKVKFKFKKGIHNIWLTNKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEFEAGTNNKKKVPINGNTKINTSKLDMFNKKK
Ga0129340_11213532	3300012963	Aqueous	MFIFTLVQLINIHKKINKVVKRIKNNEIPSIPILKLKFKKGIHNSLLTNKEPTDLLKKTHKNKESTYSKQDTFNAIDFNKKFEEGTKSKKNVPIKGNIKIKINKFA
Ga0170791_141693961	3300013295	Freshwater	MPSTPKLKFRFKKGIHNNLLTSKDPTDLLKKTHKNKETEYKKHDTFKAMDFSNEFEAGTNNRKKTPIKGSTSINTSKLDIF
Ga0192960_1005474	3300018515	Marine	LILTLVQLIKIHRKINKVVKRIKKREIPSIPRLKLKFKKGIHNNLLTNXKELTDLLKKTHKNKEIIYIKQDAFKAINFNSEXFEAGTNNKQKILIKGNTIRKTNKFDTSNTNKSNINTL
Ga0193553_11194112	3300018873	Marine	MKKIEIPSIPILKLKFKKGIHNNLFTNXKELIDLLKKTHKNREVRYKKQDIFNAIDFSNKXFEAGLSNKKRIPIKGNNNIKTNKFEMSNNKSNIPM
Ga0192968_100064573	3300018981	Marine	MKKSDMPSIPRLKFKFKKGIHNNLLTNXKEPIDLLKKNHKNKEITYKKQDVFKAISFNKEXFEVGTNNNKKVPIKGSTIRKTNKFDISNHEKFNINTL
Ga0192968_100518962	3300018981	Marine	MKNKEIPSIPIVKLKFKKGIQANLLTNXKELVDLLKKTHKSRDITYKLPEIFKAIAFSSEXFQVGTKKIINVPNKGNIKIRISKFVTFNKEKSNINIL
Ga0180035_11058342	3300019191	Estuarine	MKKSEIPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMMYKKQDIFKAIDFNNKXFEAGTNNKRKTPIKGNTSINTSKLVVFNKKKSNINIL
Ga0180036_10943104	3300019200	Estuarine	VVKRIKNNEIPSIPKLKLKFKKGIHNSLLTNXKEPMDLLKKTHKNKEITYNKQDTFKAIDFSKEXFEEGTNNNKNVPIKGNTKTKINKFVTFNKKKFNIHIL
Ga0180034_10798433	3300019207	Estuarine	MPSIPKLKFKFKKGIHNNLLTNXKEPTDLLKKTHKNKEIEYKKQDTFKAMDFNNKXFEAGTNNRRKTPTKGNTIINTSKLVIFNKKKSNINIL
Ga0193989_10313511	3300019707	Sediment	SDIPSIPKLKFKFKKGIHSNLLTNXKEPTDLLKKTHKNKEIIYKKQDTFKAKDFNSEXFEAGTNNKKKVPIKGNTIINISKFDMFNKKKSNINIL
Ga0193972_10010492	3300019717	Sediment	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIXLTNXKEPIDLLKKTHKNREVTYDIQDTFKAMDFNNEXFEAGTNNKKKVPINGNTRINTSELDMFNKKKSNINIL
Ga0194011_10004008	3300019721	Sediment	MPSIPKVKFKFKKGIHNIXLTNXKEPIDLLKKTHKNREVTYDIQDTFKAMDFNNEXFEAGTNNKKKVPINGNTRINTSELDMFNKKKSNINIL
Ga0193971_10084281	3300019722	Sediment	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNMXLTNXKEPIDLLKKTHKNREVTYDIQDTFKAMDFNNEXFEAGTNNKKKVPINGNTRINTSKLDM
Ga0193968_10565611	3300019729	Sediment	KSMKKSEIPSTPKLKFKFKKGIHNNLLTNXKELIDLLKKTHKNNESTYMIQDIFKAMFFNNEQLDAGTSNKKKTPSKGNSNIKTSKLVTVGGEKSNINTL
Ga0194001_10275221	3300019730	Sediment	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIXLTNXKEPIDLLKKTHKNREVTYDIQDTFKAMDFNNEXFEAGTNNKKKVPINGNTRINTSKLDMFNKKKSNINIL
Ga0193982_10603604	3300019731	Sediment	MLKFKFKKGIHNSLLTNXKEPIDLLKKTHKSNDITYVKQDTFNAIDFNNEWFEEGAHNKKKVPIKGNTVIKTNKLAIFNKKKFNINTL
Ga0193973_10002463	3300019737	Sediment	MPSIPKVKFKFKKGIHNIXLTNXKEPIDLLKKTHKNREVTYDIQDTFKAMDFNNEXFEAGTNNKKKVPINGNTRINTSKLDMFNKKKSNINIL
Ga0193973_10027851	3300019737	Sediment	EIPSIPTLKFRFKKGIHNNXSTNXKEPMDLLKKTHKNKEITYDKQDTFKVIDFNNKXLEAGTNNKKKVPIKGNTIISTNKLEMFNKKKSNINIL
Ga0211731_116976983	3300020205	Freshwater	MPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEIEYRKQDTFKAMDFNNKXFEAGTNNRRKTPTKGNTIIKTSKLVIFNKKKSNINIL
Ga0208230_100000438	3300020496	Freshwater	MPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMEYKKQDTFKAMDFNNKXFEAGTNNRRKTPSKGNTIINTSKLVILNKKKSNINIL
Ga0210295_10501561	3300021323	Estuarine	MPSTPRLKLKFKKGIHNSLLTNWKEPTDLLKKTHKNNETTYNKQDTFKAIDFNKKXFEEGTSNRKNVPIKGNTKTKINKFVTFNKKKSNIHIL
Ga0206693_18272092	3300021353	Seawater	MPSIPKVKFKFKKGIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEXFEAGTNNKKKVPVNGNTKNNTEXIEFWLRMIIKELLSI
Ga0213860_100746732	3300021368	Seawater	MHKKISNVVKRIKNNEMPSTPTLKLRFKKGTHNILLTNXKEPLDLLKKTHKNKEITYTTQEIFKAMAFNIEMLEDGVHNSIKTPIKGNINKRISKFEVFNNKISNINIL
Ga0194117_101593671	3300021424	Freshwater Lake	TPKLKFRFKKGIHNDLLTNWKEPTDLLKKTHKNKETEYKKQETFKAIDFNNKXFEAGTNNIRKTPIKGNTSIKTSKLVMFKKKKSNINIL
Ga0213866_101313711	3300021425	Seawater	RFKKGIHNNXSTNXKEPMDLLKKTHKNKEITYDKQDTFKVIDFNNKXLEAGTNNKKKVPIKGNTIISTNKLEMFNKKKSNINIL
Ga0193945_10442321	3300021497	Sediment	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIXLTNXKEPIDLLKKTHKNREVTYDIQDTFKAMDFNNEXFEAGTNNKKKVPINGNTRINTSKLD
Ga0210304_10170082	3300021849	Estuarine	MPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMMYKKQDIFKAIDFNNKXFEAGTNNKRKTPIKGNTSINTSKLVVFNKKKSNINIL
Ga0222717_1000052710	3300021957	Estuarine Water	MFILTLVQLINIHKKINKVVKRIKNNEIPSIPILKLKFKKGIHNSLLTNXKEPTDLLKKTHKNKEITYSKQDTFNAIDFNKKXFEEGTKSKKNVPIKGNTKITINKFAAFNKKKSNIHIL
Ga0222717_103135563	3300021957	Estuarine Water	EVKRIKKSEMPSIPKVKFKFKKGIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEXFEAGTNNKKKVPINGNTKINTSKLDMFNKKKSNINIL
Ga0222716_100469726	3300021959	Estuarine Water	LTLVQLIRIHKKINNVVKRTKNNEIPSIPMLKFKFKKGIHNTLFTNXKEPIDLLKKTHKNKEIMYTLHEVFKATAFNIDELEDGMSNNIKVPNKGTSKIKRSKFVGFNNKTSNIHIL
Ga0222715_104178742	3300021960	Estuarine Water	MFDLTLVQLINIHRKINKVVKSIKNSEIPSTPKLKLKFKKGIHNNLLTNXKEPIDLLKKTHKNKETTYNRQDTFKAIDFNKEWFEEGINNSKNVPIKGNTKTKINKFVTFNKKKSNIYIL
Ga0222715_104995064	3300021960	Estuarine Water	SIHKKINKVVKRRKNNDIPSTPTLKFKFRKGIHNSLLTNXKEPIDLLKKIHKNNDITYVKQDTFNAIDFNNGWFEEGTHNKRKVPTKGNTVIKTNKLDIFSKKKFNINTL
Ga0222719_107949473	3300021964	Estuarine Water	RIKKSEMPSIPKVKFKFKKGIHNIXLTNXKEPIDLLKKTHKNREVTYDIQDTFKAMDFNNEXFEAGTNNKKKVPINGNTRINTSELDMFNKKKSNINIL
Ga0224499_100254531	3300022206	Sediment	MPSIPKLKFKFKKGTHHSLLTNXKEPTDLLKKTHKNNEITYKKQDTFKAIDFNKEXFEAGTNNRKKVLIIGNTIIKTSKFVT
Ga0224514_1000060413	3300022217	Sediment	MPSIPKLKFKFKKGTHHSLLTNXKEPTDLLKKTHKNNEITYKKQDTFKAIDFNKEXFEAGTNNRKKVLIIGNTIIKTSKFVTLKKKKSNINIL
Ga0224504_1000042923	3300022308	Sediment	VVKRIKKSEIPSIPTLKFRFKKGIHNNXFTNXKEPMDLLKKTHKNKEITYDKQDAFKVIDFNNRXLEAGTNNKKKVPIKGNIIISTNKLEMFNKKKSNINIL
Ga0224504_100825304	3300022308	Sediment	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIXLTNXKEPIDLLKKTHKNREVTYDIQDTFKAIDFNNEXFEAGTNNKKKVPINGNTKINISKLDMFNKKKSNINIL
Ga0210313_10134551	3300022375	Estuarine	IIKKSEMPSIPKIKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMEYKKQDTFKAMDFNNKXFEAGTNNRRKTPTKGNTIINTSKLVIFNKKKSNINIL
(restricted) Ga0233404_101017661	3300022913	Seawater	MHRKINKVVKSIKNSEIPSTPKLKLKFKKGIHNNLLTNXKEPIDLLKKTHKNKETTYNRQDTFKAIDFNKEWFEEGINNSKNVPIKGNTKT
(restricted) Ga0255040_100947862	3300024059	Seawater	MHKKISKVVKRIKKSEMPSIPKVKFKFKKSIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAINFNNEXFEAGTNNKKKVPVNSNTKNNTE
(restricted) Ga0255039_100972193	3300024062	Seawater	MHKKISKVVKRIKKSEMPSIPKVKLKFKKGIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEXFEAGTNNKKKVPIKGNTIINISKFDMFNKKKSNINIL
Ga0244775_102682055	3300024346	Estuarine	MHKKINNVVKRIKKSEIPSTPKLKFKFRKGIHQNLLTNXKEPIDLLKKTHKNKETTYEKQDTFKAIDFNNEWLEAGTNNRRKTPIKGNIKMITSKLVIFNKKKSNINIL
Ga0208428_11572221	3300025653	Aqueous	IPSIPKLKLKFKKGIHSSLLTNXKELIDLLKKTHKNKEIIYKKQDTFKAIDFSNEXFEAGTNSKRKVPIKGNNMIKTNKLGTSNNNKSNINTL
Ga0209652_11175303	3300025684	Marine	MKNNEIPSIPKLKLRFKKGIHNNLLTNXKEPIDLLKNTHKNKEITYKKQEVFKAIAFNAEXFEEGTNNNKKVPIKGNTKIKINKFVTFNKKKSNINIL
Ga0209137_10299184	3300025767	Marine	MHRKINKVVKSIKNSEIPSTPKLKLKFKKGIHNNLLTNXKEPIDLLKKTHKNKETTYNRQDTFKAIDFNKEWFEEGINNSKNVPIKGNTKTKINKFVTFNKKKSNIYIL
Ga0208020_10244933	3300027159	Estuarine	SEMPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMEYKKQDTFKAMDFNNKXFEAGTNNRRKTPSKGNTIINTSKLVILNKKKSNINIL
Ga0208800_10439533	3300027193	Estuarine	KFKFRKGIHQNLLTNXKEPIDLLKKTHKNKETTYEKQDTFKAIDFNNEWLEAGTNNRRKTPIKGNIKMITSKLVIFNKKKSNINIL
Ga0208163_10446823	3300027198	Estuarine	KFKKGIHNNLLTNXKEPTDLLKKTHKNREIEYKKQETFKAIDFNNKXFEAGTNNIRKTPIKGNTNINTSKLVIFKKKKSNINIL
Ga0208177_10001365	3300027254	Estuarine	MPSIPKLKFKFKKGIHSNLLTNWKEPRDLLKKTHKNKEIEYKKQDTFKAIDFNNKXFEAGTNNKKKTPIKGNTIMNTSKLVIFNKKKSNINIL
Ga0208949_10144512	3300027315	Marine	MPSIPKVKFKFKKSIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEXFEAGTNNKKKVPINGNTKINTSKLDMFNKKKSNINIL
Ga0208965_10510703	3300027406	Marine	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEXFEAGTNNKKKVPINGNTKINTSKLDMFNKKKSNINIL
Ga0208948_10223101	3300027501	Marine	MHKKISKVVKRIKKSEMPSIPKVKFKFKKGIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEXFEAGTNNKKKVPINGNTKINTSKLDMFN
Ga0208947_10263801	3300027553	Marine	RVVKRIKKSEMPSIPKVKFKFKKGIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAIDFNNEXFEAGTNNKKKVPINGNTKINTSKLDMFNKKKSNINIL
Ga0208305_101016154	3300027753	Estuarine	KRIKNNEIPSIPKLKLKFKKGIHNSLLTNXKEPMDLLKKTHKNKEITYNKQDTFKAIDFSKEXFEEGTNNNKNVPIKGNTKTKINKFVTFNKKKFNIHIL
Ga0208305_102528011	3300027753	Estuarine	IKKSEIPSTPKLKFKFRKGIHQNLLTNXKEPIDLLKKTHKNRETTYEKQDIFRAIDFNNEWLEAETNNRRKTPIKGNINRITSKLVIFNKKKSNINIL
Ga0208671_100438515	3300027757	Estuarine	MHKKINNVVKRIKKSEIPSTPKLKFKFRKGIHQNLLTNXKEPIDLLKKTHKNRETTYEKQDIFRAIDFNNEWLEAETNNRRKTPIKGNINRITSKLVIFNKKKSNINIL
Ga0209985_100535124	3300027806	Freshwater Lake	MPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEMEYKKQDTFKAMDFNNKXFEAGTNNRRKTPTKGNTIINTSKLVIFNKKKSNINIL
Ga0209092_100493693	3300027833	Marine	MKKSEIPSIPKLKFKFKNGIHNNLFTNXKEPIDLLKKTHKNTEIIYTKQETFKAKSFKNEXLEAGTHNKKKVPTKGKIMIKTNKFVQLNKQKSNINIL
Ga0209230_101422974	3300027836	Freshwater And Sediment	KFKFKKGIHNNLLTNXKEPTDLLKKTHKNKEIEYKKQDTFKAMDFNNKXFEAGTNNRRKTPTKGNTIINTSKLVIFNKKKSNINIL
Ga0210315_10192843	3300028329	Estuarine	GIHDDLLTNXKEPTDLLKKTHKNKEIEYKKQETFKAIDFNNKXFEAGTNNIRKTPIKGNTSIKTSKLVMFKKKKSNINIL
Ga0315908_101778674	3300031786	Freshwater	MKNNEMPSIPKLKLRFKKGIHNNLLTNWKEPIDLLKNTHKNKEITYKKQEVFKAIAFNAEXFEEGTNNNKKVPIKGNTKIRINKFVTFNKKKSNINIL
Ga0315316_114941851	3300032011	Seawater	MPSIPKVKFKFKKGIHNIWLTNXKEPIDLLKKTHKNKEITYDKQDTFKAINFNNEXFEAGTNNKKKVPVNGNTKNNTEXIEFWLRMIIKEL
Ga0335035_0712117_276_512	3300034105	Freshwater	MPSIPKLKFKFKKGIHNNLLTNWKEPTDLLKKTHKNKEIEYKKQDTFKAMDFNNKWFEAGTNNRRKTPTKGNTIINTSK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters