Metagenome / Metatranscriptome Family F082678

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082678
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	60 residues
Representative Sequence	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY
Number of Associated Samples	89
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	3.60 %
% of genes near scaffold ends (potentially truncated)	26.55 %
% of genes from short scaffolds (< 2000 bps)	92.92 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (96.460 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (30.088 % of family members)
Environment Ontology (ENVO)	Unclassified (50.442 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (50.442 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 88.71% β-sheet: 0.00% Coil/Unstructured: 11.29%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13578	Methyltransf_24	1.77
PF02945	Endonuclease_7	0.88
PF01464	SLT	0.88
PF01467	CTP_transf_like	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.46 %
All Organisms	root	All Organisms	3.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.46 %
cellular organisms	root	All Organisms → cellular organisms	3.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.46 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.46 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	1.77 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.46 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.77 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.46 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1.77 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035265000\|ErSWdraf_F5BXKTZ02IWNW7	Not Available	542	Open in IMG/M
2199352004\|2199846464	Not Available	1158	Open in IMG/M
3300003394\|JGI25907J50239_1090212	Not Available	600	Open in IMG/M
3300003411\|JGI25911J50253_10099209	Not Available	892	Open in IMG/M
3300003412\|JGI25912J50252_10058874	Not Available	1022	Open in IMG/M
3300004481\|Ga0069718_15605093	Not Available	1890	Open in IMG/M
3300005525\|Ga0068877_10197002	Not Available	1208	Open in IMG/M
3300005580\|Ga0049083_10025256	Not Available	2135	Open in IMG/M
3300005580\|Ga0049083_10157415	Not Available	778	Open in IMG/M
3300005581\|Ga0049081_10139027	Not Available	893	Open in IMG/M
3300005581\|Ga0049081_10195659	Not Available	726	Open in IMG/M
3300005582\|Ga0049080_10159363	Not Available	754	Open in IMG/M
3300005583\|Ga0049085_10284513	Not Available	539	Open in IMG/M
3300005584\|Ga0049082_10203423	Not Available	677	Open in IMG/M
3300005805\|Ga0079957_1200082	Not Available	964	Open in IMG/M
3300005956\|Ga0073920_1036006	Not Available	634	Open in IMG/M
3300006484\|Ga0070744_10113362	Not Available	782	Open in IMG/M
3300006484\|Ga0070744_10248081	Not Available	504	Open in IMG/M
3300007544\|Ga0102861_1112204	Not Available	731	Open in IMG/M
3300007544\|Ga0102861_1217528	Not Available	527	Open in IMG/M
3300007545\|Ga0102873_1055799	Not Available	1206	Open in IMG/M
3300007546\|Ga0102874_1064295	Not Available	1174	Open in IMG/M
3300007546\|Ga0102874_1114784	Not Available	847	Open in IMG/M
3300007547\|Ga0102875_1044122	Not Available	1462	Open in IMG/M
3300007547\|Ga0102875_1115047	Not Available	854	Open in IMG/M
3300007550\|Ga0102880_1213963	Not Available	503	Open in IMG/M
3300007554\|Ga0102820_1077654	Not Available	798	Open in IMG/M
3300007561\|Ga0102914_1149570	Not Available	722	Open in IMG/M
3300007590\|Ga0102917_1329288	Not Available	526	Open in IMG/M
3300007600\|Ga0102920_1032455	Not Available	1600	Open in IMG/M
3300007617\|Ga0102897_1118261	Not Available	815	Open in IMG/M
3300007617\|Ga0102897_1130419	Not Available	769	Open in IMG/M
3300007622\|Ga0102863_1108215	Not Available	817	Open in IMG/M
3300007622\|Ga0102863_1138867	Not Available	715	Open in IMG/M
3300007622\|Ga0102863_1172819	Not Available	636	Open in IMG/M
3300007634\|Ga0102901_1141965	Not Available	682	Open in IMG/M
3300007634\|Ga0102901_1148665	Not Available	665	Open in IMG/M
3300007644\|Ga0102902_1223776	Not Available	554	Open in IMG/M
3300007670\|Ga0102862_1061716	Not Available	918	Open in IMG/M
3300007708\|Ga0102859_1201826	Not Available	591	Open in IMG/M
3300007973\|Ga0105746_1218153	Not Available	654	Open in IMG/M
3300008110\|Ga0114343_1163654	Not Available	692	Open in IMG/M
3300008113\|Ga0114346_1173985	Not Available	891	Open in IMG/M
3300008113\|Ga0114346_1287498	Not Available	577	Open in IMG/M
3300008267\|Ga0114364_1105272	Not Available	1201	Open in IMG/M
3300008267\|Ga0114364_1182233	Not Available	536	Open in IMG/M
3300008448\|Ga0114876_1155692	Not Available	828	Open in IMG/M
3300008950\|Ga0102891_1039696	Not Available	1475	Open in IMG/M
3300008950\|Ga0102891_1153611	Not Available	680	Open in IMG/M
3300008962\|Ga0104242_1066255	Not Available	603	Open in IMG/M
3300008964\|Ga0102889_1155202	Not Available	670	Open in IMG/M
3300009026\|Ga0102829_1068978	Not Available	1078	Open in IMG/M
3300009049\|Ga0102911_1040673	Not Available	1370	Open in IMG/M
3300009051\|Ga0102864_1052428	Not Available	1103	Open in IMG/M
3300009052\|Ga0102886_1244373	Not Available	526	Open in IMG/M
3300009058\|Ga0102854_1055178	Not Available	1140	Open in IMG/M
3300009068\|Ga0114973_10239919	Not Available	980	Open in IMG/M
3300009068\|Ga0114973_10565275	Not Available	585	Open in IMG/M
3300009152\|Ga0114980_10217359	Not Available	1121	Open in IMG/M
3300009155\|Ga0114968_10315410	Not Available	871	Open in IMG/M
3300009155\|Ga0114968_10466976	Not Available	681	Open in IMG/M
3300009164\|Ga0114975_10286266	Not Available	915	Open in IMG/M
3300009181\|Ga0114969_10175654	Not Available	1330	Open in IMG/M
3300009181\|Ga0114969_10182619	Not Available	1298	Open in IMG/M
3300010354\|Ga0129333_10602655	Not Available	953	Open in IMG/M
3300010354\|Ga0129333_11513488	Not Available	549	Open in IMG/M
3300013004\|Ga0164293_10533176	Not Available	771	Open in IMG/M
3300013004\|Ga0164293_10728151	Not Available	634	Open in IMG/M
3300013005\|Ga0164292_10557699	Not Available	744	Open in IMG/M
3300013006\|Ga0164294_10354728	Not Available	1010	Open in IMG/M
3300013014\|Ga0164295_11013188	Not Available	644	Open in IMG/M
3300013372\|Ga0177922_10763163	Not Available	789	Open in IMG/M
3300020141\|Ga0211732_1024580	Not Available	875	Open in IMG/M
3300020151\|Ga0211736_10057663	Not Available	551	Open in IMG/M
3300020151\|Ga0211736_10823130	Not Available	644	Open in IMG/M
3300020159\|Ga0211734_10076300	Not Available	510	Open in IMG/M
3300020159\|Ga0211734_11124295	Not Available	824	Open in IMG/M
3300020160\|Ga0211733_10611396	Not Available	506	Open in IMG/M
3300020172\|Ga0211729_11268633	Not Available	643	Open in IMG/M
3300020534\|Ga0208596_1009956	Not Available	1721	Open in IMG/M
3300020538\|Ga0208595_1018747	Not Available	1096	Open in IMG/M
3300020540\|Ga0208227_1048506	Not Available	588	Open in IMG/M
3300020569\|Ga0208229_1021034	Not Available	1104	Open in IMG/M
3300021962\|Ga0222713_10283528	Not Available	1063	Open in IMG/M
3300021963\|Ga0222712_10433500	Not Available	791	Open in IMG/M
3300022407\|Ga0181351_1184406	Not Available	714	Open in IMG/M
3300024343\|Ga0244777_10622124	Not Available	652	Open in IMG/M
3300024343\|Ga0244777_10652753	Not Available	633	Open in IMG/M
3300024346\|Ga0244775_10643958	Not Available	857	Open in IMG/M
3300024346\|Ga0244775_10976407	Not Available	669	Open in IMG/M
3300024346\|Ga0244775_11290489	Not Available	565	Open in IMG/M
3300027084\|Ga0208443_1063424	Not Available	754	Open in IMG/M
3300027659\|Ga0208975_1092320	Not Available	886	Open in IMG/M
3300027733\|Ga0209297_1001772	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	12334	Open in IMG/M
3300027753\|Ga0208305_10279414	Not Available	588	Open in IMG/M
3300027754\|Ga0209596_1102906	Not Available	1344	Open in IMG/M
3300027754\|Ga0209596_1219643	Not Available	799	Open in IMG/M
3300027759\|Ga0209296_1000741	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	27721	Open in IMG/M
3300027785\|Ga0209246_10147070	Not Available	926	Open in IMG/M
3300027805\|Ga0209229_10505570	Not Available	515	Open in IMG/M
3300027963\|Ga0209400_1273181	Not Available	659	Open in IMG/M
3300027971\|Ga0209401_1185673	Not Available	786	Open in IMG/M
3300031746\|Ga0315293_10976526	Not Available	605	Open in IMG/M
3300032046\|Ga0315289_10729470	Not Available	890	Open in IMG/M
3300033981\|Ga0334982_0077401	Not Available	1787	Open in IMG/M
3300033992\|Ga0334992_0000899	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	24212	Open in IMG/M
3300034013\|Ga0334991_0000661	All Organisms → cellular organisms → Archaea	32165	Open in IMG/M
3300034061\|Ga0334987_0537099	Not Available	704	Open in IMG/M
3300034104\|Ga0335031_0285180	Not Available	1080	Open in IMG/M
3300034283\|Ga0335007_0689676	Not Available	573	Open in IMG/M
3300034284\|Ga0335013_0069944	Not Available	2505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.11%
Terrestrial	Environmental → Terrestrial	0.89%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	60.18%
Marine	Environmental → Aquatic → Marine	38.94%
Soil	Environmental → Terrestrial → Soil	0.89%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	39.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	30.09%
Lentic	Environmental → Aquatic → Freshwater → Lentic	18.58%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.19%
Coastal	Environmental → Aquatic → Marine → Coastal	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
River	Environmental → Aquatic → Freshwater → River	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	38.05%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	30.09%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	14.16%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.19%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.42%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.65%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	30.09%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	12.39%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.50%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.96%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.08%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.31%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.42%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.42%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	4.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.77%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.77%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.89%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.89%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.89%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.89%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035265000	Freshwater microbial communities from Swedish Lakes - surface of Lake Erken	Environmental	Open in IMG/M
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300003412	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005584	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300005956	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_23-Sept-14	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007546	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-02	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007554	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007670	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300007973	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2um	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008962	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5	Environmental	Open in IMG/M
3300008964	Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009052	Estuarine microbial communities from the Columbia River estuary - metaG 1550A-02	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013006	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaG	Environmental	Open in IMG/M
3300013014	Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES006 metaG	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020534	Freshwater microbial communities from Lake Mendota, WI - 12JUL2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020538	Freshwater microbial communities from Lake Mendota, WI - 28JUN2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020540	Freshwater microbial communities from Lake Mendota, WI - 13JUN2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020569	Freshwater microbial communities from Lake Mendota, WI - 22AUG2011 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027084	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-02 (SPAdes)	Environmental	Open in IMG/M
3300027121	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepC_8h	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027753	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ErSWdraft_5681260	2035265000	Freshwater	MQTFNNNELATLRISLMDKIDKMDKIVENCQKTNDQLSVLYWQEAIARNTELLNKLYSMQ
2200030780	2199352004	Freshwater	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQ
JGI25907J50239_10902121	3300003394	Freshwater Lake	MKDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQR*
JGI25911J50253_100992091	3300003411	Freshwater Lake	MKDINNNELATLRIALMDKIDKMXRXXKXXEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY*
JGI25912J50252_100588744	3300003412	Freshwater Lake	MQDINNNELATLRIALMDKIDKMXRXXKDCEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY*
Ga0069718_156050936	3300004481	Sediment	MKDINNNELATIRIALMDKIDNMNKYAKDCEKFNNTLGKMYWEESIVKHNELLDKLYSMQVY*
Ga0068877_101970021	3300005525	Freshwater Lake	MQNINNDELATIRIALMSKIDDISIYLKDCEKYGNETGKLYWQESIVKHRELLDKLYKLQVY*
Ga0049083_100252568	3300005580	Freshwater Lentic	MKDINNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWQEAIVRNTELLNKLYNMQTY*
Ga0049083_101574153	3300005580	Freshwater Lentic	MKDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQ
Ga0049081_101390273	3300005581	Freshwater Lentic	MKDINNNELATLRIALMDKIDKMDGIVKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY*
Ga0049081_101956591	3300005581	Freshwater Lentic	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY*
Ga0049080_101593633	3300005582	Freshwater Lentic	MKDINNNELATLRIALMDKIDKMDEIVKNCKKTNDITSELYWQEAIVRNTELLNKLYNMQTY*
Ga0049085_102845133	3300005583	Freshwater Lentic	MKDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWQEAIVKHNELLN
Ga0049082_102034233	3300005584	Freshwater Lentic	MKDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY*
Ga0079957_12000824	3300005805	Lake	MQNIDNNELATIRIALMDKIDNMNKYAKDCEKFNNPLGKMYWEESIVKHNELLDKLYSMQVY*
Ga0073920_10360061	3300005956	Sand	MKDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY*
Ga0070744_101133622	3300006484	Estuarine	MKNINNNELATLRIALMDKIDKMDEIVKNCKKTNDITSELYWQEAIVRNTELLNKLYNMQTY*
Ga0070744_102480812	3300006484	Estuarine	MKDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY*
Ga0102861_11122043	3300007544	Estuarine	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQR*
Ga0102861_12175281	3300007544	Estuarine	MKDINNNELATLRIALMDKIDKMDEIVKNCKKTNDITSELYWQEAIVRNTELLNKLY
Ga0102873_10557991	3300007545	Estuarine	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSQLYWQEAIVKHNELLNKLYDMQKY*
Ga0102874_10642954	3300007546	Estuarine	RIALMDKIDKMDRIVKDCEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY*
Ga0102874_11147841	3300007546	Estuarine	INNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWQEAIVRNTELLNKLYNMQTY*
Ga0102875_10441225	3300007547	Estuarine	MKDINNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWEEAIVRNTELLNKLYNMQTY*
Ga0102875_11150473	3300007547	Estuarine	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMHKY*
Ga0102880_12139632	3300007550	Estuarine	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQR*
Ga0102820_10776542	3300007554	Estuarine	MKDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY*
Ga0102914_11495701	3300007561	Estuarine	NNMKDINNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWQEAIVRNTELLNKLYNMQTY*
Ga0102917_13292882	3300007590	Estuarine	MQDINNNELATLRIALMDKIDKMDRIIKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY*
Ga0102920_10324555	3300007600	Estuarine	MKDINNNELATLRIALMDKIDKMDEIVKNCKKTNDITSELYWQEAIGRNTEL*
Ga0102897_11182611	3300007617	Estuarine	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQRY*
Ga0102897_11304193	3300007617	Estuarine	MQDINNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWQEAIVRNTELLNKLYNMQTY*
Ga0102863_11082151	3300007622	Estuarine	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSQLYWQEAIVKHNELLNKLYDMQR*
Ga0102863_11388673	3300007622	Estuarine	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSQLYWQEAIVKHNELLN
Ga0102863_11728193	3300007622	Estuarine	MKDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSQLYWQEAIVKHNELLNKLYDMQKY*
Ga0102901_11419651	3300007634	Estuarine	ATLRIALMDKIDKMDRIVKDCEKTNDQLSQLYWQEAIVKHNELLNKLYDMQKY*
Ga0102901_11486653	3300007634	Estuarine	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYD
Ga0102902_12237762	3300007644	Estuarine	MQDINNNELATLRIALMDKIDKMDRIIKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKYYTIAQQE
Ga0102862_10617164	3300007670	Estuarine	MQDINNNELATLRIALMDKIDKMDEIVKNCKKTNDITSELYWQEAIVRNTELLNKLYNMQTY*
Ga0102859_12018263	3300007708	Estuarine	MKDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLN
Ga0105746_12181531	3300007973	Estuary Water	MKDINNNELATLRIALMDKIDKMDRIIKDCEKTNDQLSKLYWEEAIVKHNELLNK
Ga0114343_11636541	3300008110	Freshwater, Plankton	MKDINNNELATIRIALMDKIDNMHKYIKDCERFNNLTGKMYWEDSIVKHNELLDKLYSMQVY*
Ga0114346_11739853	3300008113	Freshwater, Plankton	MQNINNNELATIRIALMEKIDNMHKYIKDCERFNNLTGKMYWEDSIVKHNELLDKLYSMQVY*
Ga0114346_12874982	3300008113	Freshwater, Plankton	MQNINNNELATIRIALMDKIDNMNKYAKDCEKFNNTLGKMYWEESIVKHNELLDKLYSMQVY*
Ga0114364_11052723	3300008267	Freshwater, Plankton	MKDINNNELATIRIALMDKIDNMHKYIKDCERFNNLTGKMYWEDSIVKHTELLDKLYSMQVY*
Ga0114364_11822331	3300008267	Freshwater, Plankton	MQNINNNELATIRIALMDKIDNMHKYVRDCERFNNLTGKMYWEDSIVKHNELLDKLYSMQVY*
Ga0114876_11556921	3300008448	Freshwater Lake	MQNINNNELATIRIALMDKIDNMHKYIKDCERFNNLTGKMYWEDSIVKHNELLDKLYSMQVY*
Ga0102891_10396965	3300008950	Estuarine	MKDINNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWQEAIVRNTELLNKLYNRQTY*
Ga0102891_11536111	3300008950	Estuarine	TFSINNNMQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSQLYWQEAIVKHNELLNKLYDMQKY*
Ga0104242_10662551	3300008962	Freshwater	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQR*
Ga0102889_11552021	3300008964	Estuarine	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY*
Ga0102829_10689782	3300009026	Estuarine	MKNINNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWQEAIVRNTELLNKLYNMQTY*
Ga0102911_10406731	3300009049	Estuarine	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY*
Ga0102864_10524285	3300009051	Estuarine	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKL
Ga0102886_12443731	3300009052	Estuarine	MQDINNNELATLRIALMDKIDKMDKIVKDCEKTNDKLSKLYWQEAIVKHNELLNK
Ga0102854_10551781	3300009058	Estuarine	MQDINNNALATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY*
Ga0114973_102399193	3300009068	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQRQ*
Ga0114973_105652752	3300009068	Freshwater Lake	MKDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQRQ*
Ga0114980_102173591	3300009152	Freshwater Lake	MKDFNNNELATLRIALMDKIDKMDEIVKNCEKTNDITSQLYWQEAIVRNNELLNKLYDMQR*
Ga0114968_103154103	3300009155	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKC*
Ga0114968_104669763	3300009155	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIVKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQR*
Ga0114975_102862661	3300009164	Freshwater Lake	MKDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNK
Ga0114969_101756542	3300009181	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYEMQKY*
Ga0114969_101826191	3300009181	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQKY*
Ga0129333_106026552	3300010354	Freshwater To Marine Saline Gradient	MQDINNNELATIRIALMDKIDNMNKYAKDCEKFNNPLGKMYWEETIVKHTELLDKLYKLQVY*
Ga0129333_115134881	3300010354	Freshwater To Marine Saline Gradient	MQNIDNNELATIRIALMDKIDNMNKYAKDCEKFNNPLGKMYWEESIVKHNELLDKLYSMQ
Ga0164293_105331763	3300013004	Freshwater	MQDINNNELATLRIALMDKIDKMDKIIKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQR*
Ga0164293_107281511	3300013004	Freshwater	NMQNINNNELATIRIALMDKIDNMHKYVRDCERFNNLTGKMYWEDSIVKHNELLDKLYSMQVY*
Ga0164292_105576992	3300013005	Freshwater	ATIRIALMDKIDNMNKYAKDCEKFNNTLGKMYWEESIVKHNELLDKLYSMQVY*
Ga0164294_103547281	3300013006	Freshwater	MKDFNNNELATLRIALMDKIDKMDEIVKNCEKTNDTTSQLYWQEAIVRNNELLNKLYDMQKY*
Ga0164295_110131881	3300013014	Freshwater	MQDINNNELATLRIALMDKIDKMDEIVKNCEKTNDTTSQLYWQEAIVRNNELLNKLYDMQKY*
Ga0177922_107631632	3300013372	Freshwater	MKDINNNELATLRIALMDKIDKMDGIVKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQR*
Ga0211732_10245803	3300020141	Freshwater	MQTFNNNELTTIRIALMEKIDNMHEYIKDCEKYGNETGKLYWQEAIVKHTELLNKLYTL
Ga0211736_100576631	3300020151	Freshwater	MQNLNNNELATLRISLMDKIDKMDKIITDCEKTNDQLSALYWQEAIVKHNELLNKLYSMQ
Ga0211736_108231303	3300020151	Freshwater	MKDINNNELTTIRIALMEKIDNMHEYIKDCEKYGNETGKLYWQEAIVKHTELLDKLYTLQVY
Ga0211734_100763001	3300020159	Freshwater	LRISLMDKIDKMDKIVENCQKTNDQLSVLYWQEAIARNTELLNKLYSMQT
Ga0211734_111242951	3300020159	Freshwater	MQNINNDELATIRLALMSKIDDISIYLKDCEKYGNETGKLYWQESIVKHRELLDKLYTLQVY
Ga0211733_106113961	3300020160	Freshwater	NNELATLRISLMDKIDKMDKIITDCEKTNDQLSALYWQEAIVKHNELLNKLYSMQT
Ga0211729_112686331	3300020172	Freshwater	MQTFNNNELATLRISLMDKIDKMDKIIENCDKTNDQLSALYWQEAIVKHTELLNKLYSMQ
Ga0208596_10099563	3300020534	Freshwater	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNEL
Ga0208595_10187473	3300020538	Freshwater	MKDINNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWQEAIVRNTELLNKLYNMQTY
Ga0208227_10485061	3300020540	Freshwater	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYD
Ga0208229_10210341	3300020569	Freshwater	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLY
Ga0222713_102835283	3300021962	Estuarine Water	MQDINNNELATLRIALMDKIDKMDEIVKNCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY
Ga0222712_104335003	3300021963	Estuarine Water	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLY
Ga0181351_11844061	3300022407	Freshwater Lake	MKDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY
Ga0244777_106221242	3300024343	Estuarine	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMHKY
Ga0244777_106527533	3300024343	Estuarine	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQ
Ga0244775_106439583	3300024346	Estuarine	MKDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY
Ga0244775_109764071	3300024346	Estuarine	MKNINNNELATLRIALMDKIDKMDEIVKNCEKTNDITSKLYWQEAIVRNTELLNKLYNMQTY
Ga0244775_112904892	3300024346	Estuarine	MKDINNNELATLRIALMDKIDKMDEIVKNCKKTNDITSELYWQEAIVRNTELLNKLYNMQTY
Ga0208443_10634243	3300027084	Estuarine	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY
Ga0255074_10376311	3300027121	Freshwater	MKDLNNNELATIRIAILDKIDNMHKYLKDCENEGNYTGKTYWKESIVRHTELLNKLYSMQVY
Ga0208975_10923203	3300027659	Freshwater Lentic	MKDINNNELATLRIALMDKIDKMDGIVKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY
Ga0209297_100177211	3300027733	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQRQ
Ga0208305_102794141	3300027753	Estuarine	MKDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWQEAIVKHNELLNK
Ga0209596_11029063	3300027754	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQKY
Ga0209596_12196433	3300027754	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDM
Ga0209296_100074120	3300027759	Freshwater Lake	MKDFNNNELATLRIALMDKIDKMDEIVKNCEKTNDITSQLYWQEAIVRNNELLNKLYDMQ
Ga0209246_101470701	3300027785	Freshwater Lake	MKDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWQEAIVKHNELLNKLYDMQKY
Ga0209229_105055701	3300027805	Freshwater And Sediment	MQNINNDELATIRIALMSKIDDISIYLKDCEKYGNETGKLYWQESIVKHRELLDKLYSMQVY
Ga0209400_12731811	3300027963	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIVKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQ
Ga0209401_11856731	3300027971	Freshwater Lake	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQRQ
Ga0315293_109765263	3300031746	Sediment	MKDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSKLYWEEAIVKHNELLNKLYDMQKY
Ga0315289_107294701	3300032046	Sediment	MQDINNNELATLRIALMDKIDKMDRIVKDCEKTNDQLSQLYWQEAIVKHNELLNKLYDMQKY
Ga0334982_0077401_660_845	3300033981	Freshwater	MKDFNNNELATLRIALMDKIDKMDTIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQ
Ga0334992_0000899_23940_24125	3300033992	Freshwater	MQDINNNELATLRIALMDKIDKMDTIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQ
Ga0334991_0000661_5579_5764	3300034013	Freshwater	MKDFNNNELATLRIALMDKIDKMDEIVKNCEKTNDTTSQLYWQEAIVRNNELLNKLYDMQ
Ga0334998_0513506_517_666	3300034019	Freshwater	MQDINNNELATLRIALMDKIDKMDRIIKECEKTNDQLSKLYWEEAIVKHN
Ga0334987_0537099_56_241	3300034061	Freshwater	MQDINNNELATLRIALMDKIDKMDKIIKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQ
Ga0335031_0285180_808_993	3300034104	Freshwater	MQDINNNELATLRIALMDKIDKMDKIIKECEKTNDQLSKLYWEEAIVKHNELLNKLYDMQ
Ga0335007_0689676_321_506	3300034283	Freshwater	MQNINNNELATLRIALMDKIDKMDKIIKECEKTNDQLSKLYWEEAIVRHNELLNKLYDMQ
Ga0335013_0069944_2279_2467	3300034284	Freshwater	MQNINNNELATIRIALMDKIDNMHKYVRDCERFNNLTGKMYWEDSIVKHNELLDKLYSMQVY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082678

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences