Metagenome Family F082484

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082484
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	56 residues
Representative Sequence	ESADYVLIAEIVNIEHWQQQAELRVQALADDLAHLVSSRRMLVLERIL
Number of Associated Samples	95
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.54 %
% of genes near scaffold ends (potentially truncated)	97.35 %
% of genes from short scaffolds (< 2000 bps)	93.81 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.947 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.009 % of family members)
Environment Ontology (ENVO)	Unclassified (20.354 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.407 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.53% β-sheet: 0.00% Coil/Unstructured: 39.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF06736	TMEM175	12.39
PF00581	Rhodanese	7.96
PF06772	LtrA	6.19
PF12680	SnoaL_2	1.77
PF01975	SurE	1.77
PF01842	ACT	1.77
PF12681	Glyoxalase_2	1.77
PF01872	RibD_C	1.77
PF00106	adh_short	0.88
PF01063	Aminotran_4	0.88
PF04993	TfoX_N	0.88
PF01384	PHO4	0.88
PF08281	Sigma70_r4_2	0.88
PF06742	DUF1214	0.88
PF13602	ADH_zinc_N_2	0.88
PF02036	SCP2	0.88
PF05191	ADK_lid	0.88
PF00264	Tyrosinase	0.88
PF01957	NfeD	0.88
PF01061	ABC2_membrane	0.88
PF13460	NAD_binding_10	0.88
PF04909	Amidohydro_2	0.88
PF13508	Acetyltransf_7	0.88
PF12161	HsdM_N	0.88
PF01625	PMSR	0.88
PF08240	ADH_N	0.88
PF12697	Abhydrolase_6	0.88
PF03006	HlyIII	0.88
PF10604	Polyketide_cyc2	0.88
PF00326	Peptidase_S9	0.88
PF03625	DUF302	0.88
PF01464	SLT	0.88
PF13443	HTH_26	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	12.39
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	6.19
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.77
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.77
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	1.77
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.77
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.88
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.88
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.88
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.88
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.88
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.88
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.95 %
Unclassified	root	N/A	38.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.95 %
Unclassified	root	N/A	38.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.95 %
Unclassified	root	N/A	38.05 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.79 %
Unclassified	root	N/A	38.05 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.59 %
Unclassified	root	N/A	38.05 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.20 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.42 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	2.65 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.88 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.93 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3.54 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.77 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.93 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.77 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.77 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Baekduiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae	0.88 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.93 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.77 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.77 %
Baekduia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia	0.88 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.88 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.05 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.93 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.77 %
Actinobacteria bacterium SCGC AG-212-D09	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	1.77 %
Actinoplanes consettensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes consettensis	0.88 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.88 %
Baekduia soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	0.88 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.88 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0249021	Not Available	623	Open in IMG/M
3300000891\|JGI10214J12806_10353251	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300000955\|JGI1027J12803_102021389	Not Available	700	Open in IMG/M
3300002568\|C688J35102_119084676	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300002568\|C688J35102_120537541	Not Available	1157	Open in IMG/M
3300003373\|JGI25407J50210_10164628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300003659\|JGI25404J52841_10143434	Not Available	507	Open in IMG/M
3300004081\|Ga0063454_101599757	Not Available	562	Open in IMG/M
3300004157\|Ga0062590_102040898	Not Available	596	Open in IMG/M
3300004157\|Ga0062590_102918761	Not Available	512	Open in IMG/M
3300004479\|Ga0062595_101204261	Not Available	673	Open in IMG/M
3300004480\|Ga0062592_101569610	Not Available	635	Open in IMG/M
3300005093\|Ga0062594_100548900	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300005093\|Ga0062594_100736454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300005184\|Ga0066671_10868464	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005332\|Ga0066388_104426927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	716	Open in IMG/M
3300005334\|Ga0068869_101896470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300005438\|Ga0070701_10941923	Not Available	599	Open in IMG/M
3300005444\|Ga0070694_101291840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	613	Open in IMG/M
3300005468\|Ga0070707_102272974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300005546\|Ga0070696_100861741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300005548\|Ga0070665_102508406	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300005937\|Ga0081455_10416705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300005937\|Ga0081455_10727940	Not Available	629	Open in IMG/M
3300006038\|Ga0075365_10482232	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300006038\|Ga0075365_10715903	All Organisms → cellular organisms → Bacteria → Terrabacteria group	707	Open in IMG/M
3300006042\|Ga0075368_10340464	Not Available	652	Open in IMG/M
3300006046\|Ga0066652_100617518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300006046\|Ga0066652_101257563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300006051\|Ga0075364_10925732	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300006791\|Ga0066653_10222421	Not Available	960	Open in IMG/M
3300006845\|Ga0075421_101963129	Not Available	624	Open in IMG/M
3300006852\|Ga0075433_10047280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3743	Open in IMG/M
3300006880\|Ga0075429_100657612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300006880\|Ga0075429_101802421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300006918\|Ga0079216_11431182	Not Available	574	Open in IMG/M
3300009012\|Ga0066710_103318296	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009098\|Ga0105245_10004523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	12285	Open in IMG/M
3300009098\|Ga0105245_10615344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1114	Open in IMG/M
3300009098\|Ga0105245_11211013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes consettensis	803	Open in IMG/M
3300009100\|Ga0075418_10446784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300009147\|Ga0114129_13327736	Not Available	519	Open in IMG/M
3300009174\|Ga0105241_12236444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300009176\|Ga0105242_11529906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300009176\|Ga0105242_12876912	Not Available	532	Open in IMG/M
3300009553\|Ga0105249_10078101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3071	Open in IMG/M
3300009789\|Ga0126307_10092024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2398	Open in IMG/M
3300009789\|Ga0126307_10564052	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300010038\|Ga0126315_10447247	All Organisms → cellular organisms → Bacteria → Terrabacteria group	818	Open in IMG/M
3300010038\|Ga0126315_11051513	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300010038\|Ga0126315_11152398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300010041\|Ga0126312_10599095	Not Available	792	Open in IMG/M
3300010041\|Ga0126312_10814282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300010041\|Ga0126312_10875508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300010043\|Ga0126380_11606234	Not Available	580	Open in IMG/M
3300010045\|Ga0126311_11662504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300010166\|Ga0126306_11743250	Not Available	521	Open in IMG/M
3300010320\|Ga0134109_10066724	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1214	Open in IMG/M
3300010323\|Ga0134086_10366142	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010335\|Ga0134063_10081200	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1452	Open in IMG/M
3300010373\|Ga0134128_13086414	Not Available	512	Open in IMG/M
3300010375\|Ga0105239_12751159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300010375\|Ga0105239_12951089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300010396\|Ga0134126_10640949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1212	Open in IMG/M
3300011003\|Ga0138514_100035565	Not Available	961	Open in IMG/M
3300012208\|Ga0137376_11132963	Not Available	669	Open in IMG/M
3300012210\|Ga0137378_11536341	Not Available	576	Open in IMG/M
3300012353\|Ga0137367_11199395	Not Available	507	Open in IMG/M
3300012885\|Ga0157287_1027064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300012908\|Ga0157286_10281469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	600	Open in IMG/M
3300012938\|Ga0162651_100096235	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012948\|Ga0126375_11198108	Not Available	632	Open in IMG/M
3300012951\|Ga0164300_10097743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1282	Open in IMG/M
3300012955\|Ga0164298_10819079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	668	Open in IMG/M
3300012957\|Ga0164303_11571495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300012958\|Ga0164299_10155705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1270	Open in IMG/M
3300012958\|Ga0164299_10794832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300012960\|Ga0164301_10887531	Not Available	691	Open in IMG/M
3300012985\|Ga0164308_11089113	Not Available	715	Open in IMG/M
3300012986\|Ga0164304_10175899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1374	Open in IMG/M
3300012989\|Ga0164305_10545051	Not Available	922	Open in IMG/M
3300013296\|Ga0157374_12415952	Not Available	553	Open in IMG/M
3300013754\|Ga0120183_1008084	Not Available	691	Open in IMG/M
3300014157\|Ga0134078_10627210	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300014965\|Ga0120193_10013592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	825	Open in IMG/M
3300015200\|Ga0173480_10791896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium SCGC AG-212-D09	604	Open in IMG/M
3300015373\|Ga0132257_102127196	Not Available	725	Open in IMG/M
3300018027\|Ga0184605_10156355	Not Available	1027	Open in IMG/M
3300018476\|Ga0190274_13487456	All Organisms → cellular organisms → Bacteria → Terrabacteria group	531	Open in IMG/M
3300018482\|Ga0066669_12301022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Baekduiaceae → Baekduia → Baekduia soli	514	Open in IMG/M
3300019361\|Ga0173482_10749614	Not Available	511	Open in IMG/M
3300019885\|Ga0193747_1112418	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300022756\|Ga0222622_10742357	Not Available	715	Open in IMG/M
3300025908\|Ga0207643_10286557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1022	Open in IMG/M
3300025949\|Ga0207667_10908879	Not Available	872	Open in IMG/M
3300026802\|Ga0207511_102222	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	983	Open in IMG/M
3300027907\|Ga0207428_10026661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4820	Open in IMG/M
3300028597\|Ga0247820_10945085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300028721\|Ga0307315_10111056	Not Available	813	Open in IMG/M
3300028768\|Ga0307280_10349008	Not Available	546	Open in IMG/M
3300028782\|Ga0307306_10156279	Not Available	636	Open in IMG/M
3300028787\|Ga0307323_10052054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1444	Open in IMG/M
3300028791\|Ga0307290_10295711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300028811\|Ga0307292_10447899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300028824\|Ga0307310_10519971	Not Available	601	Open in IMG/M
3300028828\|Ga0307312_10193577	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300030617\|Ga0311356_10162043	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2308	Open in IMG/M
3300030619\|Ga0268386_10038428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3780	Open in IMG/M
3300030619\|Ga0268386_11029401	Not Available	504	Open in IMG/M
3300031740\|Ga0307468_101338431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	654	Open in IMG/M
3300031824\|Ga0307413_11545843	Not Available	588	Open in IMG/M
3300031938\|Ga0308175_101780509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300033475\|Ga0310811_10835050	Not Available	850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.57%
Host-Associated	Host-Associated	27.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.80%
Plants	Host-Associated → Plants	27.43%
Aquatic	Environmental → Aquatic	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.19%
Roots	Host-Associated → Plants → Roots	4.42%
Sediment	Environmental → Aquatic → Sediment	1.77%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.77%
Peat	Environmental → Terrestrial → Peat	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.93%
Loam	Environmental → Terrestrial → Soil → Loam	7.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.31%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.54%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.77%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.77%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.01%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.65%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.77%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013754	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C1.rep2	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026802	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_02490211	3300000033	Soil	IVNIERWEQQAEQRVQGLADDLAHLVSSRKMLVLQRIL*
JGI10214J12806_103532513	3300000891	Soil	GGGEAADYVLMAEIVNVENWEQQAEERTQELADDLAHLVSSRQYLVLERVL*
JGI1027J12803_1020213891	3300000955	Soil	GQAGGGEAADYVLIAEIVNVENWVQQAAERTQQLADDLAHLVSSRQYLVLERV
C688J35102_1190846761	3300002568	Soil	LDTMTDWRLTRPMDVPGQAGGGEAADYVLIAEIVNVENWEQQAEERTEQLTDDLAHLVSNRQMLVLERVI*
C688J35102_1205375412	3300002568	Soil	MASDRDVVRSSLDTMSDYRLTRPTDVPGQASGSADYVLIAEIHNLERWEQQAEARVRSLEDDLGHLVSSRRMLVLQHVL*
JGI25407J50210_101646282	3300003373	Tabebuia Heterophylla Rhizosphere	MASDRDIVHGSLETMPDWRLTRPTDVPGQATESADYVLIAEIVNLAHWQQQAELRVQALADDLEHLVSSRR
JGI25404J52841_101434342	3300003659	Tabebuia Heterophylla Rhizosphere	LMASDRDIVRSSLDTMSGWRLTRPMDVPGQAGGGEAADYVLIAEIVNVDNWGEQAQERVQELADQLAHLVSSRQMLVLEPVS*
Ga0063454_1015997571	3300004081	Soil	DIVRGSLDTMSDWRLTRPMDVPGQAGGGEAADYVLIAEIVNVENWEEQGEERTQQLTDDLAHLVSSRQMLILERVI*
Ga0062590_1020408982	3300004157	Soil	DRDIVHGSLDTMPEYRLTRPMDIPGQAIDAADYVLIAEIVNLERWEQQAEERVQSLADDLEHLVSTRRMLVLERVL*
Ga0062590_1029187611	3300004157	Soil	GQASESADYVLIAEIHNIQRWQQQAEERVESLEDDLAHLVSSRKMLVLERIL*
Ga0062595_1012042612	3300004479	Soil	SADYVLIAEIVNIERWQQQAEERVEGLADALAHLVSSRRMLVLERIL*
Ga0062592_1015696101	3300004480	Soil	ESADYVLIAEIHNIQRWQQQAEERVESLEDDLAHLVSSRKMLVLERIL*
Ga0062594_1005489003	3300005093	Soil	WRLTRPMDVPGQAGDGADYVLIAEIVNIERWQQQAEQRVQGLADDLAHLVSSRKMLVVQNIL*
Ga0062594_1007364542	3300005093	Soil	LMASDRDIVHGSLDTMPDWRLTRPMDVPGQAIESADYVLIAEIVNIERWQQQAEQRVQGLADDLEHLVSSRRMLVLERIA*
Ga0066671_108684641	3300005184	Soil	ADYVLIAEIVNLKRWQLQADQRVEGLADDLEHLVSSRRMLVLERIL*
Ga0066388_1044269273	3300005332	Tropical Forest Soil	GQASEGADYVLIAEIVNLERFQHQAETHIDALTDALGHLVSSRRMLILEQVL*
Ga0068869_1018964701	3300005334	Miscanthus Rhizosphere	AEIVNVEHWQQQAERRVQGLADDLEHLVSSRRMLVLERIL*
Ga0070701_109419232	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	IAEIVNIERWQRQAEERVEGLADALAHLVSSRRMLVLERIL*
Ga0070694_1012918401	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VPGQAGDGADYVLIAEIVNIERWQQQAEQRVQGLADDLAHLVSSRKMLVVQNIL*
Ga0070707_1022729741	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	TDRDIVHGSLDTMPGWQLTRPADAPGQAIGAADYVLIAEIVNLKRWEQQAELRVQSLADDLEHLVSSRRMVILEHIL*
Ga0070696_1008617411	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RLTRPMDVPGQAGEAADYVLIAEIVNVQNWEQQAEERTQQLADDLAHLVSSRQYLVLERVL*
Ga0070665_1025084061	3300005548	Switchgrass Rhizosphere	IPGQAIESADYVLIAEIVNVEHWQQQAEERVQSLADDLEHLVSSRRMLILERVL*
Ga0081455_104167052	3300005937	Tabebuia Heterophylla Rhizosphere	SLDTMSDWRLTRPMDVPGQAGGGEAADYVLIAELVNIENWEQQAEERIQELADDLAHLVSSRQMLVLERVT*
Ga0081455_107279401	3300005937	Tabebuia Heterophylla Rhizosphere	QRWQQQAEARVDSLADDLGHLVSSRKMLVLERIL*
Ga0075365_104822321	3300006038	Populus Endosphere	VLIAEIVNIERWQQQAEQRVQGLADDLAHLVSSRKMLVVQNIL*
Ga0075365_107159031	3300006038	Populus Endosphere	SADYVLIAEIHNLQRWEQQAEERVESLEEDLAHLVSSRKMLVLERIL*
Ga0075368_103404642	3300006042	Populus Endosphere	VLIAEIVNIERWQQQAEERVEGLADALAHLVSSRRMLVLERIL*
Ga0066652_1006175181	3300006046	Soil	GGSLDTMSDWRLTRPMDVPGQASESADYVLIAEIHNIQRWQQQAEARVESLEDDLAHLVSSRKMLILQRIL*
Ga0066652_1012575631	3300006046	Soil	EIVNVENWERQAEERVQQLADDLEHLVSNRQMLVLEHVI*
Ga0075364_109257321	3300006051	Populus Endosphere	ASESADYVLIAEIHNLQRWEQQAEERVESLEEDLAHLVSSRKMLVLERIL*
Ga0066653_102224212	3300006791	Soil	PMDVPGQAGGGEAADYVLMAELVNVENWEQQAEERTQELADDLAHLVSSRQYLVLERVL*
Ga0075421_1019631292	3300006845	Populus Rhizosphere	ADYVLIAEIVNVEHWQQQAERLVQGLADDLAPLVSSRKMLVLQRIL*
Ga0075433_100472801	3300006852	Populus Rhizosphere	HNIQRWQQQAEARVDTLADDLAHLVSSRRMLVLERIL*
Ga0075429_1006576122	3300006880	Populus Rhizosphere	ESADYVLIAEIVNIEHWQQQAELRVQALADDLAHLVSSRRMLVLERIL*
Ga0075429_1018024212	3300006880	Populus Rhizosphere	ESADYVLIAEIVNIEYWQRQAERRVQALADDLEHLVSSRRMLVLERIV*
Ga0079216_114311822	3300006918	Agricultural Soil	ERWEQQAEERVQSLADDLEHLVSTRRMLVLERVL*
Ga0066710_1033182962	3300009012	Grasslands Soil	DRDVVGGSLDTMSDWRLTRPMDVPGQASESADYVLIAEIHNIQRWQQQAEERVESLEDDLAHLVSSRQYLVLERVL
Ga0105245_100045231	3300009098	Miscanthus Rhizosphere	NIERWQRQAEERVEGLADALAHLVSSRKMLVLERIL*
Ga0105245_106153442	3300009098	Miscanthus Rhizosphere	DTMSNWRLTRPADVPGQAGGGQAADYVLIAEIVNIENWEQQADERVQELADDLEHLVSSRQMLVLEHVL*
Ga0105245_112110131	3300009098	Miscanthus Rhizosphere	AADYVLIAEIVNLKRWEQQAELRVQSLADDLEHLVSSRRMLILEHVL*
Ga0075418_104467843	3300009100	Populus Rhizosphere	GQANESADYVLIAEIVNIEHWQQQAELRVQALADDLAHLVSSRRMLVLERIL*
Ga0114129_133277362	3300009147	Populus Rhizosphere	LIAEIHNIQRWQQQAEERVESLEDDLAHLVSSRKMLVLERIL*
Ga0105241_122364441	3300009174	Corn Rhizosphere	RLTRPMDVPGQAGDGADYVLIAEIVNIERWQQQAEQRVQGLADDLAHLVSSRKMLVLERIL*
Ga0105242_115299062	3300009176	Miscanthus Rhizosphere	DIVGDSLDTMSDYRLTRPMDVPGQASESADYVLIAEIHNIQRWQEQAEARVESLEDDLAHLVSSRRMLILERIL*
Ga0105242_128769123	3300009176	Miscanthus Rhizosphere	LMAEIVNVENWEQQAEERTQELANDLAHLVSSRQYLVLERVL*
Ga0105249_100781016	3300009553	Switchgrass Rhizosphere	MDVPGQAGDGADYVLIAEIVNIERWQQQAEQRVQGLADDLAHLVSSRKMLVVQNIL*
Ga0126307_100920245	3300009789	Serpentine Soil	NVENWEQQAEERTQELADDLAHLVSSRQYLVLERVL*
Ga0126307_105640522	3300009789	Serpentine Soil	EAADYVLMAEIVNMENWEEQAEERTQELADDLAHLVSSRKMLVLERVL*
Ga0126315_104472472	3300010038	Serpentine Soil	PGQAGGGEAADYVLMAEIVNVENWEQQAEERTQELADDLAHLVSSRKYLVLERVL*
Ga0126315_110515131	3300010038	Serpentine Soil	RPMDVPGQAGGGEAADYVLMAEIVNIENWKQQAEERTQELADDLAHLVSSRKMLVLERVL
Ga0126315_111523981	3300010038	Serpentine Soil	SDRDIVRGSLDTMSDWRLTRPMDVPGQAGGGEAADYVLMAEIVNIENWEQQAEERTQELADDLAHLVSSRKMLVLERVL*
Ga0126312_105990951	3300010041	Serpentine Soil	VENWEQQAEERTQELADDLAHLVSSRKMLVLERVL*
Ga0126312_108142821	3300010041	Serpentine Soil	HSSLETMPDWRLMRPTDVPGQSTGSADYVLIAEIVNIAYWQQQAELRVQALADDLERLVSSRGMLVLERVL*
Ga0126312_108755081	3300010041	Serpentine Soil	HSSLETMPDWRLMRPTDVPGQSTGSADYVLIAEIVNIAYWQQQAELRVQALANDLERLVSSRGMLVLERVL*
Ga0126380_116062341	3300010043	Tropical Forest Soil	GADYVLIAEIVNVERFQRQAETHIEALMDDLTHLVSSRKMLILERIL*
Ga0126311_116625041	3300010045	Serpentine Soil	SLDTMSDWRLTRPMDVPGQAGGGEAADYVLMAEIVNIENWEQQAEERTQELADDLAHLVSSRKMLVLERVL*
Ga0126306_117432501	3300010166	Serpentine Soil	PGQAMEAADYVLIAEIVNLERWQQQAELRVQGLADDLEHLVSSRRMLVLERIL*
Ga0134109_100667241	3300010320	Grasslands Soil	ADYVLIAEIHNIQRWQQQAEERVESLEDDLAHLVSSRKMLVLQRIL*
Ga0134086_103661422	3300010323	Grasslands Soil	PVDMPGQAGGGEAADYVLMAEIVNIENWAQQAEERVQELSDDLAHLVSSRQMLVLERVI*
Ga0134063_100812001	3300010335	Grasslands Soil	IAEIHNIQRWQQQAEARVESLEDDLAHLVSSRKMLVLQRIL*
Ga0134128_130864141	3300010373	Terrestrial Soil	ADIHNIQRWEQQAEERVQSLEDDLAHLVSSRKMLVLERIL*
Ga0105239_127511591	3300010375	Corn Rhizosphere	SESADYVLIAEIVNVEHWQQQAERRVQGLADDLEHLVSSRRMLVLERIL*
Ga0105239_129510892	3300010375	Corn Rhizosphere	MADDRDIVRGSLDTMSDWRLTRPTDVPGQATESADYVLIAEIVNIERWQQQAEQRVQGLADDLAHLVSSRKMLVVQNIL*
Ga0134126_106409493	3300010396	Terrestrial Soil	RDTVSSSLDTMADYRLTRPMDVPGQAGGGEAADYVLMAEIVNVENWEQQAEERTQELANDLAHLVSSRQYLVLERVL*
Ga0138514_1000355651	3300011003	Soil	AEIVNLKRWQQQADQRVEGLADDLEHLVSSRRMLVLERIL*
Ga0137376_111329631	3300012208	Vadose Zone Soil	SADYVLIAEIVNIERWQRQAEERVEGLADALAHLVSSRKMLVLERIL*
Ga0137378_115363413	3300012210	Vadose Zone Soil	AGGGEAADYVLMAEIVNVENWEQQAEERTQELADDLAHLVSSRKMLVLQRIL*
Ga0137367_111993952	3300012353	Vadose Zone Soil	SSLDTMSDYRLTRPMDVPGQAGGGEAADYVLMAEIVNVENWEQQAEERTQELADDLAHLVSSRKYLVLERVI*
Ga0157287_10270643	3300012885	Soil	ESADYVLIAEIHNIQRWQEQAEARVESLEDDLAHLVSSRQYLVLERVL*
Ga0157286_102814691	3300012908	Soil	TNVPGQAGGGEAADYVLIAEIVNIENWEQQAEERIQELADDLEHLVSSRQMLVLEHVI*
Ga0162651_1000962351	3300012938	Soil	MDVPGQAGGGEEADYVLMAEIVNVENWEKQAEERTQELADDLAHLVSSRK
Ga0126375_111981082	3300012948	Tropical Forest Soil	SADYVLIAEIVNIEHWQQQAELRVQALADDLEHLVSSRRMLVLERVL*
Ga0164300_100977431	3300012951	Soil	IVHGSLDTMSDWRLTRPTDVPGQAGGGEAADYVLIAEIVNIENWQQQAEERTQELADELAHLVSSRQMLVLERIL*
Ga0164298_108190792	3300012955	Soil	SLDTMSDWRLTRPTDVPGQAGGGEAADYVLIAEIVNIENWQQQAEERTQELADELAHLVSSRQMLVLERIL*
Ga0164303_115714951	3300012957	Soil	RDIVGGSLDTMSDWRLTRPTDVPGQAGESADYVLIAEIVNIERWQQQAEERVEGLADDLAHLVSSRKMLVLERIL*
Ga0164299_101557051	3300012958	Soil	NIQRWQQQAEQRVESLEDDLAHLVSSRRMLVLERIL*
Ga0164299_107948321	3300012958	Soil	VGGSLDTMSDWRLTRPTDVPGQAGESADYVLIAEIVNIERWQQQAEERVEGLADDLAHLVSSRKMLVLQRIL*
Ga0164301_108875311	3300012960	Soil	SLDTMSDYRLTRPMDVPGQASESADYVLIAEIHNVQRWQQQGEERVESLADDLAHLVSSRKMLVLERIL*
Ga0164308_110891132	3300012985	Soil	VPGQASESADYVLIAEIHNIQRWQQQAEARVDSLADDLAHLVSSRRMLVLERIL*
Ga0164304_101758991	3300012986	Soil	DYVLIAEIHNIQRWQEQAEARVESLEDDLAHLVSSRRMLILERIL*
Ga0164305_105450511	3300012989	Soil	GESADYVLIAEIVNIERWQQQAEQRVESLADDLAHLVSSRKMLVLQRIL*
Ga0157374_124159521	3300013296	Miscanthus Rhizosphere	SVFGALDTMRDYRLTRPMDVRGQAAEAADYVLIAEIGNIERWQRQAEERVEGLADALAHLVSSRRMLVLERIL*
Ga0120183_10080841	3300013754	Terrestrial	TDVPGQATESADYVLIAEIVNIERWQQQAEQRVQGLADDLEHLVSSRRMLVLERIL*
Ga0134078_106272101	3300014157	Grasslands Soil	LTRPMDVPGQAGGGEAADYVLMAEIVNVENWKQQAEERTHELADDLAHLVSSRKYLVLERVL*
Ga0120193_100135922	3300014965	Terrestrial	YVLIAEIVNIENWEQQAEERIQELADDLAHLVSSRKYLVLERVL*
Ga0173480_107918961	3300015200	Soil	IENWEQQAEERTQELADDLAHLVSSRQYLVLERVL*
Ga0132257_1021271962	3300015373	Arabidopsis Rhizosphere	EIVNVENWEQQAEERTQELANDLAHLVSSRQYLVLERVL*
Ga0184605_101563551	3300018027	Groundwater Sediment	GQASESADYVLIAEIHNIQRWEQQAEQRVQSLENDLGHLVSSRKMLVLQRIL
Ga0190274_134874562	3300018476	Soil	VHGSLDTMSDWRLTRPTDVPGQAGDAADYVLIAEVVNVERWQQQAEERVEELADDLGHLVSSRKMLVLERVI
Ga0066669_123010222	3300018482	Grasslands Soil	IESADYVLIAEIVNVERWQQQAELRVQGLADDLEPLVSSRRMLVLERIL
Ga0173482_107496142	3300019361	Soil	DVPGQAGGGEAADYVLMAEIVNVENWEQQAEERTQELADDLAHLVSSRQYLVLERVL
Ga0193747_11124182	3300019885	Soil	IAEIVNIEHWQQQADLRVEALADDLDHLVSSRRMLVLERIL
Ga0222622_107423571	3300022756	Groundwater Sediment	DSADYVLIAEIVNIERWQQEADQRVQSLADDLEHLVSSRRMLVLERIL
Ga0207643_102865571	3300025908	Miscanthus Rhizosphere	SLDTMPNWRLTRPTEVPGQAIEAADYVLIAEIVNIQRWQQQAEHRAQDLADDLEHLVSCRRMLVLERIL
Ga0207667_109088792	3300025949	Corn Rhizosphere	AESADYVLIAEIVNIERWQRQAEERVEGLADALAHLVSSRKMLVLERIL
Ga0207511_1022222	3300026802	Soil	DVPGQAGGGEAADYVLMAEIVNVENWEQQAEERTQELANDLAHLVSSRKMLVLERIL
Ga0207428_100266617	3300027907	Populus Rhizosphere	SDRDIVHGSLDTMPDWRLTRPMDVPGQAIESADYVLIAEIVNVERWQQQAEQRVQGLADDLEHLVSSRRMLVLERIV
Ga0247820_109450852	3300028597	Soil	LMASDRDIVRGSLDTMSDWRLTRPMDVPGQAGGGEAADYVLMAEIVNIENWEQQAEERTQELADDLAHLVSSRKMLVLERVL
Ga0307315_101110562	3300028721	Soil	IVNIERWQQEADQRVQSLADDLEHLVSSRRMLVLERIL
Ga0307280_103490082	3300028768	Soil	VLIAEIVNIEHWQQQADLRVEALADDLDHLVSSRRMLVLERIL
Ga0307306_101562791	3300028782	Soil	SADYVLIAEIVNIERWQQEADQRVQSLADDLEHLVSSRRMLVLERIL
Ga0307323_100520541	3300028787	Soil	LMASDRDVVRGSLDTMSDWRLTRPMDVPGQASESADYVLIAEIHNIQRWQQQAEARVESLEDDLAHLVSSRKMLVLQRIL
Ga0307290_102957111	3300028791	Soil	SADYVLIAEIHNIQRWQQQAEARVESLEDDLAHLVSSRKMLVLQRIL
Ga0307292_104478992	3300028811	Soil	DRAIVHGSLDTMPDWRLTRPTDVPGQAIDSADYVLIAEIVNIERWQQEADQRVQSLADDLEHLVSSRRMLVLERIL
Ga0307310_105199711	3300028824	Soil	IQRWQQQAEARVESLEDDLAHLVSSRKMLVLQRIL
Ga0307312_101935773	3300028828	Soil	GQAIDSADYVLIAEIVNIEHWQQQADLRVEALADDLDHLVSSRRMLVLERIL
Ga0311356_101620431	3300030617	Palsa	LDTMSDWRLTRPMNVPGQPNEPADYVLIAEISEVDRWEQQASEQVQRLADDLAHLVSSYRMHVLERIL
Ga0268386_100384281	3300030619	Soil	ADYVLMAEIVNVENWEQQAEERTQELADDLAHLVSSRKYLVLERVL
Ga0268386_110294011	3300030619	Soil	DYVLMAEIVNVENWEQQAEERTQELADDLAHLVSSRKYLVLERVL
Ga0307468_1013384312	3300031740	Hardwood Forest Soil	ITTVENWQQQAEERIQELADDLAQLVSSRQMLVLERVL
Ga0307413_115458431	3300031824	Rhizosphere	AEIVNVKNWEKQAEERTQELADDLAHLVSSRKYLVLERVL
Ga0308175_1017805092	3300031938	Soil	RLARPSGVPGQAHDSADYVLIAEIHNVERWEQQAAERVESLQDDLAHLVSSRKMLVLHRI
Ga0310811_108350501	3300033475	Soil	QDIVFGSLDTMRDYRLTRPMDVPGQAAESADYVLIAEIVNIERWQQQAEERVEGLADALAHLVSSRKMLVLERIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082484

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences