| Basic Information | |
|---|---|
| Family ID | F082374 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 113 |
| Average Sequence Length | 61 residues |
| Representative Sequence | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLED |
| Number of Associated Samples | 107 |
| Number of Associated Scaffolds | 113 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 30.91 % |
| % of genes near scaffold ends (potentially truncated) | 95.58 % |
| % of genes from short scaffolds (< 2000 bps) | 85.84 % |
| Associated GOLD sequencing projects | 104 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.27 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (70.796 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (18.584 % of family members) |
| Environment Ontology (ENVO) | Unclassified (44.248 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) (40.708 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 8.14% β-sheet: 22.09% Coil/Unstructured: 69.77% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.27 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 113 Family Scaffolds |
|---|---|---|
| PF03420 | Peptidase_S77 | 88.50 |
| PF11450 | DUF3008 | 4.42 |
| PF03237 | Terminase_6N | 2.65 |
| PF07230 | Portal_Gp20 | 1.77 |
| PF01467 | CTP_transf_like | 0.88 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 70.80 % |
| All Organisms | root | All Organisms | 29.20 % |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 18.58% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake | 15.04% |
| Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 10.62% |
| Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine | 9.73% |
| Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 6.19% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater | 4.42% |
| Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 4.42% |
| Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 3.54% |
| Seawater | Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater | 3.54% |
| Freshwater, Plankton | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton | 2.65% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 2.65% |
| Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 2.65% |
| Freshwater | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater | 1.77% |
| Freshwater | Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater | 1.77% |
| Estuary Water | Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water | 1.77% |
| Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 1.77% |
| Freshwater | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater | 0.89% |
| Freshwater Lentic | Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic | 0.89% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 0.89% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 0.89% |
| Surface Water | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water | 0.89% |
| Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 0.89% |
| Estuarine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine | 0.89% |
| Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 0.89% |
| Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 0.89% |
| Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment | 0.89% |
| Visualization |
|---|
| Powered by ApexCharts |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300002408 | Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123) | Environmental | Open in IMG/M |
| 3300002835 | Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605) | Environmental | Open in IMG/M |
| 3300003345 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNA | Environmental | Open in IMG/M |
| 3300003346 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNA | Environmental | Open in IMG/M |
| 3300003411 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD | Environmental | Open in IMG/M |
| 3300003488 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN | Environmental | Open in IMG/M |
| 3300003497 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN | Environmental | Open in IMG/M |
| 3300003499 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN | Environmental | Open in IMG/M |
| 3300003617 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA | Environmental | Open in IMG/M |
| 3300004096 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2) | Environmental | Open in IMG/M |
| 3300005517 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4) | Environmental | Open in IMG/M |
| 3300005583 | Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF | Environmental | Open in IMG/M |
| 3300006026 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA | Environmental | Open in IMG/M |
| 3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
| 3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
| 3300007559 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 | Environmental | Open in IMG/M |
| 3300007606 | Estuarine microbial communities from the Columbia River estuary - metaG 1569-02 | Environmental | Open in IMG/M |
| 3300007634 | Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02 | Environmental | Open in IMG/M |
| 3300007642 | Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3 | Environmental | Open in IMG/M |
| 3300007972 | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um | Environmental | Open in IMG/M |
| 3300007974 | Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um | Environmental | Open in IMG/M |
| 3300008113 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA | Environmental | Open in IMG/M |
| 3300008120 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA | Environmental | Open in IMG/M |
| 3300008262 | Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA | Environmental | Open in IMG/M |
| 3300008448 | Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs | Environmental | Open in IMG/M |
| 3300008996 | Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 | Environmental | Open in IMG/M |
| 3300009001 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG | Environmental | Open in IMG/M |
| 3300009050 | Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02 | Environmental | Open in IMG/M |
| 3300009124 | Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf | Environmental | Open in IMG/M |
| 3300009160 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG | Environmental | Open in IMG/M |
| 3300009180 | Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG | Environmental | Open in IMG/M |
| 3300009436 | Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome | Environmental | Open in IMG/M |
| 3300009606 | Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009739 | Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_194_18m (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010160 | Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG | Environmental | Open in IMG/M |
| 3300013005 | Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG | Environmental | Open in IMG/M |
| 3300013126 (restricted) | Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m | Environmental | Open in IMG/M |
| 3300014962 | Surface water microbial communities from Bangladesh - BaraHaldiaSW0309 | Environmental | Open in IMG/M |
| 3300017719 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 | Environmental | Open in IMG/M |
| 3300017756 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 | Environmental | Open in IMG/M |
| 3300017766 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D | Environmental | Open in IMG/M |
| 3300017774 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D | Environmental | Open in IMG/M |
| 3300017777 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N | Environmental | Open in IMG/M |
| 3300017784 | Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N | Environmental | Open in IMG/M |
| 3300017785 | Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N | Environmental | Open in IMG/M |
| 3300017950 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018041 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300018410 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300019266 | Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101407AT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019459 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly) | Environmental | Open in IMG/M |
| 3300020162 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1 | Environmental | Open in IMG/M |
| 3300020172 | Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1 | Environmental | Open in IMG/M |
| 3300020177 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020188 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300020527 | Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes) | Environmental | Open in IMG/M |
| 3300020531 | Freshwater microbial communities from Lake Mendota, WI - 21SEP2012 deep hole epilimnion (SPAdes) | Environmental | Open in IMG/M |
| 3300020539 | Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes) | Environmental | Open in IMG/M |
| 3300020810 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly) | Environmental | Open in IMG/M |
| 3300021140 | Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion | Environmental | Open in IMG/M |
| 3300021347 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266 | Environmental | Open in IMG/M |
| 3300021389 | Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127 | Environmental | Open in IMG/M |
| 3300021963 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D | Environmental | Open in IMG/M |
| 3300022926 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG | Environmental | Open in IMG/M |
| 3300022927 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG | Environmental | Open in IMG/M |
| 3300023110 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG | Environmental | Open in IMG/M |
| 3300023685 | Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 50R (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300024185 | Seawater microbial communities from Monterey Bay, California, United States - 84D | Environmental | Open in IMG/M |
| 3300024343 | Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction | Environmental | Open in IMG/M |
| 3300024346 | Whole water sample coassembly | Environmental | Open in IMG/M |
| 3300024351 | Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_0h | Environmental | Open in IMG/M |
| 3300024355 | Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8h | Environmental | Open in IMG/M |
| 3300025083 | Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025608 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300025770 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes) | Environmental | Open in IMG/M |
| 3300026478 | Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8h | Environmental | Open in IMG/M |
| 3300027241 | Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02 (SPAdes) | Environmental | Open in IMG/M |
| 3300027246 | Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02 (SPAdes) | Environmental | Open in IMG/M |
| 3300027375 | Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepC_8d | Environmental | Open in IMG/M |
| 3300027503 | Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepA_8d | Environmental | Open in IMG/M |
| 3300027578 | Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepA_8h | Environmental | Open in IMG/M |
| 3300027593 | Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Atlam_RepB_8h | Environmental | Open in IMG/M |
| 3300027688 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes) | Environmental | Open in IMG/M |
| 3300027744 | Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SN (SPAdes) | Environmental | Open in IMG/M |
| 3300027753 | Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes) | Environmental | Open in IMG/M |
| 3300027756 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes) | Environmental | Open in IMG/M |
| 3300027769 | Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes) | Environmental | Open in IMG/M |
| 3300027804 | Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes) | Environmental | Open in IMG/M |
| 3300031621 | Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface | Environmental | Open in IMG/M |
| 3300031951 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120 | Environmental | Open in IMG/M |
| 3300032050 | Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122 | Environmental | Open in IMG/M |
| 3300032275 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom | Environmental | Open in IMG/M |
| 3300033994 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME25Jul2006D11-rr0046 | Environmental | Open in IMG/M |
| 3300033996 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004 | Environmental | Open in IMG/M |
| 3300034013 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034 | Environmental | Open in IMG/M |
| 3300034018 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME04Jul2014-rr0021 | Environmental | Open in IMG/M |
| 3300034062 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045 | Environmental | Open in IMG/M |
| 3300034071 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110 | Environmental | Open in IMG/M |
| 3300034093 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jun2014-rr0072 | Environmental | Open in IMG/M |
| 3300034101 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107 | Environmental | Open in IMG/M |
| 3300034102 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112 | Environmental | Open in IMG/M |
| 3300034104 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120 | Environmental | Open in IMG/M |
| 3300034105 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127 | Environmental | Open in IMG/M |
| 3300034120 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172 | Environmental | Open in IMG/M |
| 3300034122 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181 | Environmental | Open in IMG/M |
| 3300034279 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163 | Environmental | Open in IMG/M |
| 3300034283 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061 | Environmental | Open in IMG/M |
| 3300034284 | Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| B570J29032_1089345482 | 3300002408 | Freshwater | MSKKPFDIYDYVHNNKMTLKVEGHKGTTVSKAYNDIRKTNLKEVKIVNGKFSLAENLE |
| B570J40625_1002185301 | 3300002835 | Freshwater | MAKNFDIYDFVHNNKITLKVDSNKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENL |
| JGI26080J50196_10032391 | 3300003345 | Marine | MSKKNFDIYDYVHNNKFSLKVENKKETNVFKGYNDIRKTNINEVKIVDGKFSLSES |
| JGI26081J50195_10151734 | 3300003346 | Marine | MSKKNFDIYDYVHNNKFELKVESKKETNVFKGYNDIRKTNINEVKIVDGKFS |
| JGI25911J50253_101003862 | 3300003411 | Freshwater Lake | MANNFDIYDFVHNNKITLKVDSNKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENLGDR |
| JGI25919J51413_10066691 | 3300003488 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSIAENLEGDRKLSN |
| JGI25925J51416_100709911 | 3300003497 | Freshwater Lake | MAKNFDIYDFVHNNKITLNVAAPKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVK |
| JGI25930J51415_10420512 | 3300003499 | Freshwater Lake | MSKNFDIYNYVHNNKFKLNVEQPKGVTKVAKGYNDIRKTALSEVKIKDGKFSIKENLEQPDRKLSLEVKKHF |
| JGI26082J51739_100099271 | 3300003617 | Marine | MSKKNFDIYDYVHNNKFSLKVENKKETNVFKGYNDIRKTNINEVKIVDGKFSLSE |
| Ga0066177_100593753 | 3300004096 | Freshwater Lake | MANNFDIYDFVHNNKITLKVDSNKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENLGDRKLSNEVKKHFLE |
| Ga0070374_106397561 | 3300005517 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFS |
| Ga0049085_102168671 | 3300005583 | Freshwater Lentic | MANNFDIYDFVHNNKITLKVDSNKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAE |
| Ga0075478_102068902 | 3300006026 | Aqueous | MSKKNFDIYDYVHNNKFTLKVENKGGTKVSKGYNDIRKTNINEVKIVDGKFSLSESLEGE |
| Ga0070749_104714842 | 3300006802 | Aqueous | MSKKNFDIYDYVHNNKFTLKVENKGGTKVSKGYNDIRKTNINEVKIVDGKFSLAESLDANRPWQLK* |
| Ga0070746_105445171 | 3300006919 | Aqueous | MSKKNFDIYDYVHKNKFTLNVDTPKGIRVSKGYNDIRKTNINEVKIVDGKFSLSESLDANRPLATEVKKHFL |
| Ga0102828_10684791 | 3300007559 | Estuarine | MAKNFDIYDFVHNNKITLKVDSNKGTTVAKAYNDIRKTNLKEVKIVNGKFSIAESLGGDRKLSNEVKKHFL |
| Ga0102923_12565292 | 3300007606 | Estuarine | MSKKPFDIYDYVHNNKMTLKVEGHKGTTVSKAYNDIRKTNLKEVKIVN |
| Ga0102901_11342462 | 3300007634 | Estuarine | MAKNFDIYDYVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSIAENLEGEDRKLSTEVKKHF |
| Ga0102876_10989872 | 3300007642 | Estuarine | MAKNFDIYDFVHNNKITLKVDAPKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFLEIISTYN |
| Ga0105745_11421651 | 3300007972 | Estuary Water | MAKNFDIYDFVHNNKITLKVDSKQGTTVAKAYNDIRKTNLKEVKIVNGKFSIAENLEGEDRKLS |
| Ga0105747_10417344 | 3300007974 | Estuary Water | MAKNFDIYDFVHNNKITLKVDAPKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSTEVKKHFLE |
| Ga0114346_11635093 | 3300008113 | Freshwater, Plankton | MAKNFDIYDYVHNNKITLKVDAPKGTTVSKAYNDIRKTNLKEVKIVNGKFSLAENLED |
| Ga0114355_11528761 | 3300008120 | Freshwater, Plankton | MSKNFDIYNYVHNNKFKLNVEQPKGVTKVAKGYNDIRKTALSEVKIKDGKFSI |
| Ga0114337_11551901 | 3300008262 | Freshwater, Plankton | MSKNFDIYNYVHNNKFKLNVEQPKHANNVAKGYNDIRKTTLSEVKIKDGKFSI |
| Ga0114876_11752202 | 3300008448 | Freshwater Lake | MSKNFDIYSYVHNNKFKLNVEQPKGATKIAKGYNDIRKTAINEVKIKDG |
| Ga0102831_10777881 | 3300008996 | Estuarine | MSKKPFDIYDYVHNNKMTLKVEGPKGTTVSKAYNDIRKTNLKEVKIVNGKFSIAESLGGDRKLSNEVKKHFLEII |
| Ga0102963_10022291 | 3300009001 | Pond Water | MSKKNFDIYDYVHNNKFSLKVENKEGTKVSKGYNDIRKTNINEVKIVDGKFSISESLKDDRPLATEVKKH |
| Ga0102909_10990292 | 3300009050 | Estuarine | MEKKNFDIYDYVQNNKITLKVDGPKGTSVAKAYNDIRKTNLKEVKIVNGKFSIAENLEDRKL |
| Ga0102909_11503901 | 3300009050 | Estuarine | MAKNFDIYNFVHNNKITLKVDAPKGTTVSKAYNDIRKTNLKEVKIVNGKFSIAESLEDGDRKLSPE |
| Ga0118687_101207133 | 3300009124 | Sediment | MSKKNFDIYDYVHNNKFSLNVDTPKGTKVSKGYNDIRKTNINEVKIVDGKFSLSESLDANRPLATE |
| Ga0114981_101530893 | 3300009160 | Freshwater Lake | MAKNLDIYDFVHNNKITLKVDSNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRK |
| Ga0114979_100005351 | 3300009180 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDAPKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSN |
| Ga0115008_103971803 | 3300009436 | Marine | MSKKNFDIYDYVHNNKFELKVESKKETNVFKGYNDIRKTNINEVKIVDGKFSLSESIEAN |
| Ga0115102_101982445 | 3300009606 | Marine | MSKKNFDIYDYVHNNKFELKVENKKETNVFKGYNDIRKTNINEVKIVDGKFS |
| Ga0123362_10202901 | 3300009739 | Marine | MSKKNFDIYDYVHNNKFSLKVEQKGTKVSKGYNDIRKTNINEVKIVDGKFSLSESLE |
| Ga0114967_100010601 | 3300010160 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDAPKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKH |
| Ga0164292_100590541 | 3300013005 | Freshwater | MAKNFDIYDYVHNNKITLKVDGNKGTTVSKAYNDIRKTNLKEVKIVNGKFSLAENLED |
| Ga0164292_109376441 | 3300013005 | Freshwater | MAKNFDIYDFVHNNKITLKVDNKQGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRK |
| (restricted) Ga0172367_102563073 | 3300013126 | Freshwater | MSKNFDLYSYVHNNRFKLKVEEPKHVTKVAKGYNDIRKTAINEVKIKDGK |
| (restricted) Ga0172367_102564683 | 3300013126 | Freshwater | MNKNFDLYTYVHNNRFKLKVEEPKHVTKVAKGYNDIRKTAINEVKIKDGK |
| Ga0134315_10225813 | 3300014962 | Surface Water | MSKPFDIYDYVHNNKISLKVQADKKATHVAKGYNDIRKTNINEVKIVNGKFSLKESLE |
| Ga0181390_11586352 | 3300017719 | Seawater | MSKKNFDIYDYVHNNKFELKVENKKQTNVFKGYNDIRKTNINEVKIVDGKFSLSESIEANRPLTNE |
| Ga0181382_11004781 | 3300017756 | Seawater | MSKKNFDIYDYVHNNKFSLKVEQKGTKVSKGYNDIRKTNINEVKIVDGKFSLSESL |
| Ga0181343_10766371 | 3300017766 | Freshwater Lake | MAKNFDIYDYVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKH |
| Ga0181358_11055661 | 3300017774 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLED |
| Ga0181357_12665182 | 3300017777 | Freshwater Lake | MANNFDIYDFVHNNKITLKVDSNKGTTVHKAYNDIRKTNLKEVKIVNGKFSIAESLEDGDRKLSNEVKKHFLE |
| Ga0181357_13212862 | 3300017777 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLADSLS |
| Ga0181348_10417731 | 3300017784 | Freshwater Lake | MANNFDIYDFVHNNKITLKVDSNKGTTVHKAYNDIRKTNLKEVKIVNGKFSIAEN |
| Ga0181355_11017684 | 3300017785 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSIAESLEDGD |
| Ga0181607_101641683 | 3300017950 | Salt Marsh | MSKKNFDIYDYVHNNKFTLNVDAPKGTSVTKGYNDIRKTNINEVKIIDGKFSLAESLEA |
| Ga0181607_103000611 | 3300017950 | Salt Marsh | MSKKNFDIYDYVHNNKFTLKVDAPTGTSVTKGYNDIRKTNINEVKIVDGKFSIA |
| Ga0181601_102754851 | 3300018041 | Salt Marsh | MSKKNFDIYDYVHNNKFTLNVDAPTGTSVTKGYNDIRKTNINEVKIVDGKFSIAESLDAN |
| Ga0181561_104781502 | 3300018410 | Salt Marsh | MKKGFDIYKYVTENKIEFKVDSKQGKNVSKGYNDIRKTNINEVKIVDGKFSLSESLDANK |
| Ga0182061_13832101 | 3300019266 | Salt Marsh | MSKKNFDIYDYVHNNKFTLKVENKGGTKVAKGYNDIRKTNINEVKIVDGKFSLSESLKANDRP |
| Ga0181562_104501912 | 3300019459 | Salt Marsh | MSKKNFDIYDYVHNNKFSLKVENKQGTKVSKGYNDIRKTNINEVKIVD |
| Ga0211735_105042871 | 3300020162 | Freshwater | MANNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLS |
| Ga0211729_100108412 | 3300020172 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRK |
| Ga0181596_102369242 | 3300020177 | Salt Marsh | MSKKNFDIYDYVHNNKFSLNVDTPKGTKVVKGYNDIRKTNINEVKIVDGKFSLSESLEANRPLATEVKKHF |
| Ga0181605_101971781 | 3300020188 | Salt Marsh | MSKKNFDIYDYVHNNKFTLNVDAPTGTSVTKGYNDIRKTNINEVKIVDGKFSIAE |
| Ga0208232_10079524 | 3300020527 | Freshwater | MAKNFDIYDYVHNNKITLKVDAPKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFLEIIS |
| Ga0208487_10096701 | 3300020531 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFL |
| Ga0207941_10323182 | 3300020539 | Freshwater | MSKPFDIYDYVHNNKISLKVEANRKATNVTKGYNDIRKTNLNEVKIVNGKFSIKESLNG |
| Ga0181598_10868801 | 3300020810 | Salt Marsh | MKKGFDIYKYVTENKIEFKVDSKQGKNVSKGYNDIRKTNINEVKIVDGKFSLSESLDANKPL |
| Ga0214168_11197961 | 3300021140 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSIAENLEDGDRKLSNE |
| Ga0213862_102113762 | 3300021347 | Seawater | MKKGFDIYKYVTENKIEFKVDSKQGKNVSKGYNDIRKTNINEVKIVDGKFSL |
| Ga0213868_105137711 | 3300021389 | Seawater | MSKKNFDIYDYVHNNKFTLKVENKGGTKVSKGYNDIRKTNINEVKIVDGKFSLSESLEGEKKLSTEVKKH |
| Ga0222712_101837961 | 3300021963 | Estuarine Water | MAKNFDIYDFVHNNKITLKVDAPKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFLEIIST |
| Ga0255753_12348812 | 3300022926 | Salt Marsh | MSKKNFDIYDYVHNNKFTLNVDAPTGTSVTKGYNDIRKTNINEVKIVDGKFSIAESLDANRP |
| Ga0255769_101093801 | 3300022927 | Salt Marsh | MSKKNFDIYDYVHNNKFTLKVDAPTGTSVTKGYNDIRKTNINEVKIVDGKFSI |
| Ga0255743_101260293 | 3300023110 | Salt Marsh | MSKKNFDIYDYVHNNKFTLKVENKGGTKVAKGYNDIRKTNINEVKIVDGKFSLSESLKAN |
| Ga0228686_10559902 | 3300023685 | Seawater | MSKKNFDIYDYVHKNKFELKVENKKETNVFKGYNDIRKTNINEVKIVDGKFSLSESI |
| Ga0228669_10390151 | 3300024185 | Seawater | MKKGFDIYKYVTENTIEFKVDSKKGTSVSKGYNDIRKTNINDVKIVDGKFSLTESLEANK |
| Ga0244777_109199301 | 3300024343 | Estuarine | MAKNFDIYDYVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEV |
| Ga0244775_100038031 | 3300024346 | Estuarine | MAKNFDIYDYVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAE |
| Ga0255141_10557961 | 3300024351 | Freshwater | MSKNFDLYSYVHNNKFKLKVEEPKHVTKVAKGYNDIRKTALTEVKIKDGKFSIKENLEQPDR |
| Ga0255157_10426051 | 3300024355 | Freshwater | MSKNFDIYSYVHNNKFKLNVEQPKGATKVAKGYNDIRKTALSEVKIKDGKFSIKENLE |
| Ga0208791_10191021 | 3300025083 | Marine | MSKKNFDIYDYVHNNKFELKVENKKETNVFKGYNDIRKTNINEVKIVDGKFSLSESIEANRPL |
| Ga0209654_10744263 | 3300025608 | Marine | MSKKNFDIYDYVHNNKFSLKVENKKETNVFKGYNDIRKTNINEVKIVDGKFSLSESIEANKPLT |
| Ga0209362_12485052 | 3300025770 | Marine | MSKKNFDIYDYVHNNKFELKVENKKETNVFKGYNDIRKTNINEVKIV |
| Ga0255156_10526591 | 3300026478 | Freshwater | MSKNFDIYSYVHNNKFKLNVEQPKGATKVAKGYNDIRKTALSEVKIKD |
| Ga0208805_10267853 | 3300027241 | Estuarine | MSKKNFDIYDYVHNNKFELKVESKKETNVFKGYNDIRKTNINEVKIVDGKF |
| Ga0208931_10857942 | 3300027246 | Estuarine | MAKNFDIYDYVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSIAESLEDGDRKLSNEVKKHF |
| Ga0255137_10548452 | 3300027375 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNRGTTVAKAYNDIRKTNLKEVKIVNGKFSLAESLE |
| Ga0255182_10825952 | 3300027503 | Freshwater | MSKNFDLYSYVHNNKFKLKVEEPKHVTKVAKGYNDIRKTALTEVKIKDGKFSIKENLEQPDRKLSLEVKKH |
| Ga0255075_10522221 | 3300027578 | Freshwater | MAKNFDIYDFVHNNKITLKVDAPKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFLEIIS |
| Ga0255118_10339871 | 3300027593 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKH |
| Ga0209553_12681622 | 3300027688 | Freshwater Lake | MAKNFDIYDFVHNNKITLNVAAPKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFLEIIST |
| Ga0209355_12883782 | 3300027744 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAE |
| Ga0208305_100821113 | 3300027753 | Estuarine | MSKKNFDIYDYVHNNKFELKVESKKETNVFKGYNDIRKTNINEVKIVDGKFSLSESIEANRPLT |
| Ga0209444_101213871 | 3300027756 | Freshwater Lake | MAKNFDIYDFVHNNKITLNVAAPKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFL |
| Ga0209770_100354185 | 3300027769 | Freshwater Lake | MSKNFDIYSYVHNNKFKLNVEQPKGATKIAKGYNDIRKTAINEIKIKDGKFSIKENLEQP |
| Ga0209358_100284486 | 3300027804 | Freshwater Lake | MAKNFDIYDFVHNNKITLKVDSNKGTTVSKAYNDIRKTNLKEVKIVDGKFSIAENLED |
| Ga0302114_103079051 | 3300031621 | Marine | MSKKNFDIYDYVHNNKFELKVENKVGTKVSKGYNDIRKTNINEIKFVDGKFSLSESIEANKPLTNEVKKHFLE |
| Ga0315904_108639391 | 3300031951 | Freshwater | MAKNFDIYDFVHNNKITLKVDNKQGTTVAKAYNDIRKTNLKEVKIVNGKFSIAENLEDRKLSTE |
| Ga0315906_113635862 | 3300032050 | Freshwater | MAKNFDIYDFVHNNKITLKVDNKQGTTVAKAYNDIRKTNLKEVKIVNGKFSIAENLEDRKLSTEVKKHFLEI |
| Ga0315270_103522051 | 3300032275 | Sediment | MKKPFDIYEYVHNTKITLQVDAQPNATHVSKGYNDIRKTTLKEAKIVNGKFSLAESLKN |
| Ga0334996_0123853_1_150 | 3300033994 | Freshwater | MAKNFDIYDYVHKNKFELKVDAPKNATKVAKSYNDIRKTNLNEVKITDGK |
| Ga0334996_0272723_682_855 | 3300033994 | Freshwater | MAKNFDIYDFVHNNKITLKVDAPKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLED |
| Ga0334979_0110845_1494_1697 | 3300033996 | Freshwater | MAKNFDIYDYVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSIAENLEDGDRKLSNEVK |
| Ga0334991_0157190_1_219 | 3300034013 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFLEII |
| Ga0334985_0529419_2_160 | 3300034018 | Freshwater | MSKPFDIYDYVHNNKISLKVEANRKATNVTKGYNDIRKTNLNEVKIVNGKFSI |
| Ga0334995_0406032_662_850 | 3300034062 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSN |
| Ga0335028_0544820_3_170 | 3300034071 | Freshwater | MSKKPFDIYNYVHNNKMTLKVEGTKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAEN |
| Ga0335012_0278026_3_227 | 3300034093 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLSENLEDRKLSNEVKKHFLEIIST |
| Ga0335027_0484103_2_202 | 3300034101 | Freshwater | MSKNFDIYDYVHNNKFKLNVEQPKGVNKIAKGYNDIRKTAINEVKIKDGKFSIKENLEQPDRKLSLE |
| Ga0335029_0201513_1_159 | 3300034102 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLA |
| Ga0335031_0122547_1623_1817 | 3300034104 | Freshwater | MAKNFDIYDYVHNNKITLKVDGNKGTTVAKTYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSTEV |
| Ga0335035_0070058_2125_2289 | 3300034105 | Freshwater | MSKPFDIYDYVHNNKISLKVEANRKATNVTKGYNDIRKTNLNEVKIVNGKFSIKE |
| Ga0335056_0464119_2_190 | 3300034120 | Freshwater | MAKNFDIYDFVHNNKITLKVDAPKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSN |
| Ga0335060_0425493_541_696 | 3300034122 | Freshwater | MAKNFDIYDYVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSL |
| Ga0335052_0638337_3_203 | 3300034279 | Freshwater | MAKNFDIYDFVHNNKITLKVDSNKGTTVHKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKK |
| Ga0335007_0185849_1_216 | 3300034283 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLAENLEDRKLSNEVKKHFLEI |
| Ga0335013_0137809_1_216 | 3300034284 | Freshwater | MAKNFDIYDFVHNNKITLKVDGNKGTTVAKAYNDIRKTNLKEVKIVNGKFSLSENLEDRKLSNEVKKHFLEI |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |