Metagenome / Metatranscriptome Family F082362

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082362
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	63 residues
Representative Sequence	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Number of Associated Samples	89
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.79 %
% of genes near scaffold ends (potentially truncated)	53.10 %
% of genes from short scaffolds (< 2000 bps)	96.46 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.522 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.513 % of family members)
Environment Ontology (ENVO)	Unclassified (58.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.982 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.17% β-sheet: 22.41% Coil/Unstructured: 22.41%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF04392	ABC_sub_bind	5.31
PF07369	DUF1488	4.42
PF04430	DUF498	4.42
PF02810	SEC-C	0.88
PF13460	NAD_binding_10	0.88
PF00557	Peptidase_M24	0.88
PF02371	Transposase_20	0.88
PF00359	PTS_EIIA_2	0.88
PF00216	Bac_DNA_binding	0.88
PF02518	HATPase_c	0.88
PF02738	MoCoBD_1	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.31
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	4.42
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	4.42
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.88
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
All Organisms	root	All Organisms	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
cellular organisms	root	All Organisms → cellular organisms	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	15.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.16 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.19 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.16 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.42 %
Nitrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.16 %
Nitrobacter winogradskyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter winogradskyi	0.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	14.16 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.88 %
Nitrobacter winogradskyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter winogradskyi	0.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02JN1NK	Not Available	519	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10079963	Not Available	820	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10096363	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1020105	Not Available	938	Open in IMG/M
3300005166\|Ga0066674_10530566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Nitrobacter → Nitrobacter winogradskyi	526	Open in IMG/M
3300005167\|Ga0066672_10232961	Not Available	1182	Open in IMG/M
3300005181\|Ga0066678_10315972	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300005184\|Ga0066671_10281794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300005332\|Ga0066388_103981520	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300005332\|Ga0066388_105342012	Not Available	651	Open in IMG/M
3300005363\|Ga0008090_10092805	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300005454\|Ga0066687_10468094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300005540\|Ga0066697_10675694	Not Available	567	Open in IMG/M
3300005569\|Ga0066705_10872497	Not Available	534	Open in IMG/M
3300005574\|Ga0066694_10570561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300005713\|Ga0066905_100899940	Not Available	774	Open in IMG/M
3300005713\|Ga0066905_101195825	Not Available	679	Open in IMG/M
3300006032\|Ga0066696_10200512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1273	Open in IMG/M
3300006804\|Ga0079221_10606436	Not Available	739	Open in IMG/M
3300006852\|Ga0075433_11360384	Not Available	614	Open in IMG/M
3300007788\|Ga0099795_10184550	Not Available	873	Open in IMG/M
3300009143\|Ga0099792_10464889	Not Available	786	Open in IMG/M
3300010043\|Ga0126380_11421309	Not Available	610	Open in IMG/M
3300010047\|Ga0126382_10164600	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300010047\|Ga0126382_10490672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300010321\|Ga0134067_10309592	Not Available	611	Open in IMG/M
3300010337\|Ga0134062_10111559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1184	Open in IMG/M
3300010358\|Ga0126370_10205292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1492	Open in IMG/M
3300010359\|Ga0126376_11781489	Not Available	653	Open in IMG/M
3300010362\|Ga0126377_10677625	Not Available	1082	Open in IMG/M
3300012205\|Ga0137362_11265842	Not Available	623	Open in IMG/M
3300012208\|Ga0137376_10194402	Not Available	1754	Open in IMG/M
3300012209\|Ga0137379_11115759	Not Available	695	Open in IMG/M
3300012210\|Ga0137378_11624816	Not Available	554	Open in IMG/M
3300012211\|Ga0137377_10407725	Not Available	1297	Open in IMG/M
3300012353\|Ga0137367_10847158	Not Available	632	Open in IMG/M
3300012354\|Ga0137366_10395359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300012359\|Ga0137385_10892247	Not Available	736	Open in IMG/M
3300012362\|Ga0137361_11634996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300012948\|Ga0126375_10275535	Not Available	1154	Open in IMG/M
3300012957\|Ga0164303_10241193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1030	Open in IMG/M
3300012971\|Ga0126369_10602006	Not Available	1169	Open in IMG/M
3300012971\|Ga0126369_11107266	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300016270\|Ga0182036_11225371	Not Available	624	Open in IMG/M
3300016270\|Ga0182036_11435955	Not Available	578	Open in IMG/M
3300016294\|Ga0182041_11048978	Not Available	739	Open in IMG/M
3300016294\|Ga0182041_11364992	Not Available	650	Open in IMG/M
3300016319\|Ga0182033_10182022	All Organisms → cellular organisms → Bacteria	1655	Open in IMG/M
3300016319\|Ga0182033_10807385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	827	Open in IMG/M
3300016319\|Ga0182033_11340203	Not Available	644	Open in IMG/M
3300016341\|Ga0182035_11427405	Not Available	622	Open in IMG/M
3300016357\|Ga0182032_11230234	Not Available	645	Open in IMG/M
3300016357\|Ga0182032_11594353	Not Available	568	Open in IMG/M
3300016371\|Ga0182034_11219538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300016371\|Ga0182034_11960799	Not Available	517	Open in IMG/M
3300016387\|Ga0182040_10109265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1894	Open in IMG/M
3300016387\|Ga0182040_10714999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	820	Open in IMG/M
3300016404\|Ga0182037_10391738	Not Available	1142	Open in IMG/M
3300016422\|Ga0182039_12275658	Not Available	500	Open in IMG/M
3300018433\|Ga0066667_10470971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300018482\|Ga0066669_11884785	Not Available	556	Open in IMG/M
3300021560\|Ga0126371_13723790	Not Available	514	Open in IMG/M
3300025915\|Ga0207693_11356874	Not Available	530	Open in IMG/M
3300031543\|Ga0318516_10048819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2296	Open in IMG/M
3300031544\|Ga0318534_10791471	Not Available	533	Open in IMG/M
3300031545\|Ga0318541_10008663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4477	Open in IMG/M
3300031545\|Ga0318541_10040911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2345	Open in IMG/M
3300031564\|Ga0318573_10229628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300031564\|Ga0318573_10319102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300031572\|Ga0318515_10089242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1607	Open in IMG/M
3300031572\|Ga0318515_10197341	Not Available	1078	Open in IMG/M
3300031679\|Ga0318561_10219916	Not Available	1032	Open in IMG/M
3300031719\|Ga0306917_10263181	Not Available	1324	Open in IMG/M
3300031719\|Ga0306917_10265600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1318	Open in IMG/M
3300031723\|Ga0318493_10081164	All Organisms → cellular organisms → Bacteria → Proteobacteria	1598	Open in IMG/M
3300031724\|Ga0318500_10286183	Not Available	805	Open in IMG/M
3300031724\|Ga0318500_10616643	Not Available	550	Open in IMG/M
3300031736\|Ga0318501_10054796	Not Available	1878	Open in IMG/M
3300031747\|Ga0318502_10205504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1140	Open in IMG/M
3300031747\|Ga0318502_10976510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300031768\|Ga0318509_10245979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300031770\|Ga0318521_10109084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1534	Open in IMG/M
3300031771\|Ga0318546_11079808	Not Available	564	Open in IMG/M
3300031793\|Ga0318548_10063058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1722	Open in IMG/M
3300031793\|Ga0318548_10138212	Not Available	1184	Open in IMG/M
3300031793\|Ga0318548_10338665	Not Available	738	Open in IMG/M
3300031796\|Ga0318576_10088194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1403	Open in IMG/M
3300031859\|Ga0318527_10362019	Not Available	618	Open in IMG/M
3300031860\|Ga0318495_10393883	Not Available	611	Open in IMG/M
3300031879\|Ga0306919_10535507	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300031879\|Ga0306919_11028422	Not Available	629	Open in IMG/M
3300031894\|Ga0318522_10036142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1695	Open in IMG/M
3300031910\|Ga0306923_12247960	Not Available	545	Open in IMG/M
3300031912\|Ga0306921_10888404	Not Available	1012	Open in IMG/M
3300031942\|Ga0310916_10509845	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300031945\|Ga0310913_10120992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	1787	Open in IMG/M
3300031945\|Ga0310913_10275026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1185	Open in IMG/M
3300031946\|Ga0310910_11367924	Not Available	545	Open in IMG/M
3300031947\|Ga0310909_10454020	Not Available	1076	Open in IMG/M
3300031954\|Ga0306926_12599297	Not Available	552	Open in IMG/M
3300032010\|Ga0318569_10491179	Not Available	572	Open in IMG/M
3300032025\|Ga0318507_10010959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2969	Open in IMG/M
3300032035\|Ga0310911_10251726	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300032035\|Ga0310911_10482387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	718	Open in IMG/M
3300032060\|Ga0318505_10065906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1585	Open in IMG/M
3300032067\|Ga0318524_10555092	Not Available	604	Open in IMG/M
3300032076\|Ga0306924_11808386	Not Available	636	Open in IMG/M
3300032090\|Ga0318518_10540177	Not Available	596	Open in IMG/M
3300032261\|Ga0306920_101443587	Not Available	984	Open in IMG/M
3300032261\|Ga0306920_102240829	Not Available	758	Open in IMG/M
3300032261\|Ga0306920_104070538	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300033289\|Ga0310914_11224724	Not Available	652	Open in IMG/M
3300033290\|Ga0318519_10181209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1193	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.11%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.69%
Loam	Environmental → Terrestrial → Soil → Loam	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_02519230	2065487018	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVPGQATDEYLEWLDVRPGEIFCVMAVS
AF_2010_repII_A1DRAFT_100799632	3300000597	Forest Soil	MASGWRIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT*
AF_2010_repII_A001DRAFT_100963631	3300000793	Forest Soil	LVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
AP72_2010_repI_A100DRAFT_10201052	3300000837	Forest Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0066674_105305661	3300005166	Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS*
Ga0066672_102329614	3300005167	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0066678_103159721	3300005181	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRSGEIFCVMAVS*
Ga0066671_102817943	3300005184	Soil	MASGWKIITATKRLGGGPPIKEYFLVVIADRDEAVKALRDRRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS*
Ga0066388_1039815201	3300005332	Tropical Forest Soil	MKEYFLVAIADRDDAVKALRVRRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV
Ga0066388_1053420122	3300005332	Tropical Forest Soil	SGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV*
Ga0008090_100928052	3300005363	Tropical Rainforest Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLGWLDVRPGEIFCVMAVS*
Ga0066687_104680943	3300005454	Soil	YFLVAIADRDEAVKVLRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS*
Ga0066697_106756941	3300005540	Soil	MKEYFLVAIADRDEAVKVLRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0066705_108724971	3300005569	Soil	MKEYFLVVIADRDEAVKALRDRRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS*
Ga0066694_105705612	3300005574	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS*
Ga0066905_1008999402	3300005713	Tropical Forest Soil	VAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0066905_1011958251	3300005713	Tropical Forest Soil	MKEYFLVAIADRDDAVKALRVRRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0066696_102005123	3300006032	Soil	MKEYFLVAIADRDEAVKVLRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS*
Ga0079221_106064362	3300006804	Agricultural Soil	ADRGEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0075433_113603842	3300006852	Populus Rhizosphere	MKEYFLVAIADRGEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0099795_101845502	3300007788	Vadose Zone Soil	MKEYFLVAIADRDEAVKALRGRRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0099792_104648892	3300009143	Vadose Zone Soil	MKEYFLVVIVDRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0126380_114213091	3300010043	Tropical Forest Soil	MASGWKIITATKRLGGAQPMKEYFLVAIADRDDAVKALRVRRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0126382_101646002	3300010047	Tropical Forest Soil	MKEYFLVAIADRDDAVKALRVRRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV*
Ga0126382_104906721	3300010047	Tropical Forest Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEIFCVMAVS*
Ga0134067_103095921	3300010321	Grasslands Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRYEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS*
Ga0134062_101115593	3300010337	Grasslands Soil	MKEYFLVAIEDRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS*
Ga0126370_102052923	3300010358	Tropical Forest Soil	MKEYFLVAIADWDEAVKALRERRQLLDVQITVAGQASDECLERLDVRPGEIFCVMAVS*
Ga0126376_117814892	3300010359	Tropical Forest Soil	MASGWKIITATKRLGGGRPMKEYFLVAIADRDEAVNALRERRQLLDVQITVAGQASDECLERLDVRPGEIFCVMAV*
Ga0126377_106776251	3300010362	Tropical Forest Soil	MASGWKIITATKRLGGGQPMKEYFLVAIADRDDAVKALRVRRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0137362_112658421	3300012205	Vadose Zone Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGRATDEYLEWLDVRPGEIFCVMAVS*
Ga0137376_101944022	3300012208	Vadose Zone Soil	MASGWKIITATKRLGGGPPMKEYFLVAIEDRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0137379_111157591	3300012209	Vadose Zone Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVL*
Ga0137378_116248161	3300012210	Vadose Zone Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWIDVRSGEIFCVMAVS*
Ga0137377_104077251	3300012211	Vadose Zone Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIF
Ga0137367_108471582	3300012353	Vadose Zone Soil	MASGWKIITATKSLGGGPPMKEYFLVAIADRDEAVKALRECRQLLDVQITVAGQATDEYLEWIDVRSGEIFCVMAVS*
Ga0137366_103953592	3300012354	Vadose Zone Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRSGEIFCVMAVS*
Ga0137385_108922471	3300012359	Vadose Zone Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVL*
Ga0137361_116349962	3300012362	Vadose Zone Soil	MAGGWKIIAAMKRFGGGPPMKEYFLVAVTDRDEAVKTLRKRRHLLDAEMTVAGQATDEYLEWLDVRPGEIFCVLAIS*
Ga0126375_102755352	3300012948	Tropical Forest Soil	MKEYFLVAIADRDDAVKALRVRRQLLDVQITVAGQATDEYLGWLDVRPGEIFCVMAVS*
Ga0164303_102411932	3300012957	Soil	IADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS*
Ga0126369_106020061	3300012971	Tropical Forest Soil	SGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKVLRERRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAVS*
Ga0126369_111072662	3300012971	Tropical Forest Soil	LGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV*
Ga0182036_112253711	3300016270	Soil	PMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSP
Ga0182036_114359551	3300016270	Soil	ADRDEAVKALRERRQLLDVQITVAGQASDEYLEWFDVRPGEIFCVMAVS
Ga0182041_110489781	3300016294	Soil	SGWKIITATKRLGGGRPMKEYFLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMPVS
Ga0182041_113649921	3300016294	Soil	ATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT
Ga0182033_101820221	3300016319	Soil	KRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV
Ga0182033_108073852	3300016319	Soil	RLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDAQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0182033_113402031	3300016319	Soil	KRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT
Ga0182035_114274051	3300016341	Soil	PPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0182032_112302342	3300016357	Soil	DRDEAVKALRERRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAIS
Ga0182032_115943532	3300016357	Soil	KIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0182034_112195381	3300016371	Soil	MKEYLLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0182034_119607991	3300016371	Soil	RLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0182040_101092656	3300016387	Soil	MKEYFLVAIADRDEAAKALRDRRELLDVQITVAGQASDEYLERLDVRPGE
Ga0182040_107149992	3300016387	Soil	EYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEILCVMAVS
Ga0182037_103917382	3300016404	Soil	MKEYFLVAITDRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGE
Ga0182039_122756581	3300016422	Soil	RLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWFDVRPGEIFCVMAVS
Ga0066667_104709712	3300018433	Grasslands Soil	MKEYFLVAIADRDEAVKVLRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS
Ga0066669_118847851	3300018482	Grasslands Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFSVMAVS
Ga0126371_137237902	3300021560	Tropical Forest Soil	MKEYFLVAIADRDDAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0207693_113568741	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PPMKEYFLVAIADRNEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVSCPSPATPPNSPSS
Ga0318516_100488191	3300031543	Soil	MKEYFLVAIADRDDAVKALRVRRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0318534_107914711	3300031544	Soil	ARGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0318541_100086637	3300031545	Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0318541_100409111	3300031545	Soil	MKEYFLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAVS
Ga0318573_102296283	3300031564	Soil	PPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0318573_103191021	3300031564	Soil	GGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0318515_100892422	3300031572	Soil	MASGWKIITATKRLGGGRPMKEYFLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAIS
Ga0318515_101973412	3300031572	Soil	MASGWKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT
Ga0318561_102199161	3300031679	Soil	MKEYFLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAIS
Ga0306917_102631814	3300031719	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVL
Ga0306917_102656001	3300031719	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLERLDVRPGEIFCVM
Ga0318493_100811642	3300031723	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT
Ga0318500_102861831	3300031724	Soil	EYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT
Ga0318500_106166432	3300031724	Soil	GGGRPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAVS
Ga0318501_100547961	3300031736	Soil	FLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAVS
Ga0318502_102055043	3300031747	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV
Ga0318502_109765101	3300031747	Soil	EYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0318509_102459794	3300031768	Soil	ITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0318521_101090842	3300031770	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWFDVRPGEIFCVMAVS
Ga0318546_110798082	3300031771	Soil	LGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEILCVMAVS
Ga0318548_100630581	3300031793	Soil	DRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0318548_101382121	3300031793	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0318548_103386653	3300031793	Soil	RTQLLILIQPLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT
Ga0318576_100881943	3300031796	Soil	TKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWFDVRPGEIFCVMAVS
Ga0318527_103620191	3300031859	Soil	RLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT
Ga0318495_103938832	3300031860	Soil	MKEYFLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEI
Ga0306919_105355072	3300031879	Soil	GGGQPMKEYFLVAIADRDDAVKALRVRWQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV
Ga0306919_110284222	3300031879	Soil	MKEYFLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEIFCV
Ga0318522_100361426	3300031894	Soil	MKEYFLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMPVS
Ga0306923_122479601	3300031910	Soil	WKIITATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0306921_108884043	3300031912	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAVS
Ga0310916_105098451	3300031942	Soil	TKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV
Ga0310913_101209924	3300031945	Soil	MKEYFLVAIADRNRAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMA
Ga0310913_102750263	3300031945	Soil	TATKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0310910_113679241	3300031946	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEILCVMAVS
Ga0310909_104540202	3300031947	Soil	MKEYFLVAIADRDDAVKALRVRRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVM
Ga0306926_125992972	3300031954	Soil	EFACYNVRMASGWKIITATKRLGGGRPMKEYFLVAIADRDEAVKALGECRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAVS
Ga0318569_104911791	3300032010	Soil	YFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEILCVMAVS
Ga0318507_100109591	3300032025	Soil	GGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVL
Ga0310911_102517261	3300032035	Soil	FLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAV
Ga0310911_104823871	3300032035	Soil	VAIADRDEAVKALRERRQLLDAQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0318505_100659062	3300032060	Soil	MKEYFLVAIADRNRAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS
Ga0318524_105550922	3300032067	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVVAV
Ga0306924_118083861	3300032076	Soil	TKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVL
Ga0318518_105401771	3300032090	Soil	DRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEILCVMAVS
Ga0306920_1014435872	3300032261	Soil	MKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLEWLDVRPGEI
Ga0306920_1022408292	3300032261	Soil	EFACYNVRMASGWKIITATKRLGGGRPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASDEYLERLDVRPGEIFCVMAIS
Ga0306920_1040705382	3300032261	Soil	MASGWKIITATKRLGGGPPTKEYFLVAIADRDEAVKALRERRRLLDVQITVAGQASDEYLEWLDVRPGEIFCVMAVS
Ga0310914_112247243	3300033289	Soil	TKRLGGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQASNEYLEWLDVRPGEIFCVMAVSPT
Ga0318519_101812091	3300033290	Soil	GGGPPMKEYFLVAIADRDEAVKALRERRQLLDVQITVAGQATDEYLEWLDVRPGEIFCVMAVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082362

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences