Metagenome Family F082295

Basic Information
Family ID	F082295
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	89 residues
Representative Sequence	NGTHDTGPNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPALERNPT
Number of Associated Samples	95
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	96.46 %
% of genes from short scaffolds (< 2000 bps)	92.04 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Most Common Taxonomy
Group	Unclassified (57.522 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (7.965 % of family members)
Environment Ontology (ENVO)	Unclassified (51.327 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.027 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.87% β-sheet: 0.00% Coil/Unstructured: 54.13%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF13432	TPR_16	22.12
PF04389	Peptidase_M28	11.50
PF13414	TPR_11	4.42
PF04342	DMT_6	0.88
PF00691	OmpA	0.88
PF07719	TPR_2	0.88
PF01396	zf-C4_Topoisom	0.88
PF00198	2-oxoacid_dh	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0508	Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component	Energy production and conversion [C]	0.88
COG3169	Uncharacterized membrane protein, DMT/DUF486 family	Function unknown [S]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
All Organisms	root	All Organisms	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
cellular organisms	root	All Organisms → cellular organisms	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.89 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	4.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.89 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	3.54 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.89 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	3.54 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.89 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	3.54 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.89 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.54 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_111362072	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300002568\|C688J35102_119814890	Not Available	783	Open in IMG/M
3300003322\|rootL2_10120274	All Organisms → cellular organisms → Bacteria	2293	Open in IMG/M
3300004114\|Ga0062593_102170753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300004480\|Ga0062592_101217441	Not Available	705	Open in IMG/M
3300005093\|Ga0062594_103174815	Not Available	515	Open in IMG/M
3300005289\|Ga0065704_10093711	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2582	Open in IMG/M
3300005289\|Ga0065704_10827683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	516	Open in IMG/M
3300005290\|Ga0065712_10198591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300005293\|Ga0065715_10806855	Not Available	608	Open in IMG/M
3300005294\|Ga0065705_11022404	Not Available	541	Open in IMG/M
3300005294\|Ga0065705_11174664	Not Available	507	Open in IMG/M
3300005295\|Ga0065707_10131232	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300005295\|Ga0065707_10246081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140	Open in IMG/M
3300005334\|Ga0068869_100463067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300005336\|Ga0070680_101162068	Not Available	667	Open in IMG/M
3300005364\|Ga0070673_101564041	Not Available	623	Open in IMG/M
3300005366\|Ga0070659_101081110	Not Available	706	Open in IMG/M
3300005367\|Ga0070667_101335360	Not Available	672	Open in IMG/M
3300005440\|Ga0070705_100016027	All Organisms → cellular organisms → Bacteria	3886	Open in IMG/M
3300005444\|Ga0070694_101353583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005444\|Ga0070694_101611525	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005458\|Ga0070681_11967603	Not Available	512	Open in IMG/M
3300005459\|Ga0068867_102353179	Not Available	507	Open in IMG/M
3300005539\|Ga0068853_101117858	Not Available	760	Open in IMG/M
3300005546\|Ga0070696_101944415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005578\|Ga0068854_100461633	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300005618\|Ga0068864_101794713	Not Available	619	Open in IMG/M
3300005834\|Ga0068851_10963838	Not Available	537	Open in IMG/M
3300005840\|Ga0068870_11463818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005841\|Ga0068863_100265063	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300005842\|Ga0068858_100319469	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300005843\|Ga0068860_102022306	Not Available	598	Open in IMG/M
3300005844\|Ga0068862_100400697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300006847\|Ga0075431_101991943	Not Available	536	Open in IMG/M
3300006852\|Ga0075433_10189555	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300006854\|Ga0075425_101522952	Not Available	755	Open in IMG/M
3300006854\|Ga0075425_103080655	Not Available	508	Open in IMG/M
3300006904\|Ga0075424_100773738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1024	Open in IMG/M
3300006954\|Ga0079219_10830682	Not Available	732	Open in IMG/M
3300007004\|Ga0079218_13399614	Not Available	539	Open in IMG/M
3300009098\|Ga0105245_10685404	Not Available	1057	Open in IMG/M
3300009101\|Ga0105247_11272280	Not Available	589	Open in IMG/M
3300009147\|Ga0114129_10882504	Not Available	1134	Open in IMG/M
3300009148\|Ga0105243_10796444	Not Available	931	Open in IMG/M
3300009174\|Ga0105241_11599371	Not Available	630	Open in IMG/M
3300009177\|Ga0105248_10248994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	2000	Open in IMG/M
3300009789\|Ga0126307_10481175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300010037\|Ga0126304_10550053	Not Available	776	Open in IMG/M
3300010040\|Ga0126308_10138794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1526	Open in IMG/M
3300010042\|Ga0126314_10061695	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300010042\|Ga0126314_11173689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300010042\|Ga0126314_11483779	Not Available	510	Open in IMG/M
3300010044\|Ga0126310_10091622	Not Available	1818	Open in IMG/M
3300010044\|Ga0126310_11520416	Not Available	550	Open in IMG/M
3300010045\|Ga0126311_11127783	Not Available	646	Open in IMG/M
3300010047\|Ga0126382_10477069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300010047\|Ga0126382_11338454	Not Available	650	Open in IMG/M
3300010358\|Ga0126370_12355603	Not Available	528	Open in IMG/M
3300010359\|Ga0126376_11783186	Not Available	653	Open in IMG/M
3300010362\|Ga0126377_13287216	Not Available	523	Open in IMG/M
3300010397\|Ga0134124_10506201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300010399\|Ga0134127_10186458	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1918	Open in IMG/M
3300010399\|Ga0134127_10839055	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300010399\|Ga0134127_12338404	Not Available	614	Open in IMG/M
3300010400\|Ga0134122_11449146	Not Available	703	Open in IMG/M
3300010403\|Ga0134123_13498729	Not Available	508	Open in IMG/M
3300012212\|Ga0150985_117680886	Not Available	808	Open in IMG/M
3300012469\|Ga0150984_103215371	Not Available	785	Open in IMG/M
3300013100\|Ga0157373_11211552	Not Available	569	Open in IMG/M
3300013297\|Ga0157378_10386750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300014271\|Ga0075326_1068936	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300014272\|Ga0075327_1085246	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300014325\|Ga0163163_10843551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300014325\|Ga0163163_11382770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300014325\|Ga0163163_12015674	Not Available	637	Open in IMG/M
3300014325\|Ga0163163_12620544	Not Available	562	Open in IMG/M
3300015371\|Ga0132258_13108027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148	Open in IMG/M
3300015373\|Ga0132257_101335993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300015374\|Ga0132255_105057265	Not Available	558	Open in IMG/M
3300021445\|Ga0182009_10483107	Not Available	651	Open in IMG/M
3300025911\|Ga0207654_11171210	Not Available	560	Open in IMG/M
3300025917\|Ga0207660_11680936	Not Available	511	Open in IMG/M
3300025918\|Ga0207662_10822449	Not Available	655	Open in IMG/M
3300025919\|Ga0207657_11487811	Not Available	506	Open in IMG/M
3300025926\|Ga0207659_10936073	Not Available	745	Open in IMG/M
3300025927\|Ga0207687_10229333	Not Available	1466	Open in IMG/M
3300025927\|Ga0207687_10903159	Not Available	756	Open in IMG/M
3300025932\|Ga0207690_10477290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300025935\|Ga0207709_10230282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1342	Open in IMG/M
3300025935\|Ga0207709_10734337	Not Available	793	Open in IMG/M
3300025941\|Ga0207711_11222262	Not Available	693	Open in IMG/M
3300025941\|Ga0207711_11671269	Not Available	580	Open in IMG/M
3300025942\|Ga0207689_11145005	Not Available	655	Open in IMG/M
3300025960\|Ga0207651_10852703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300025981\|Ga0207640_10086056	All Organisms → cellular organisms → Bacteria	2163	Open in IMG/M
3300026023\|Ga0207677_11367487	Not Available	652	Open in IMG/M
3300026035\|Ga0207703_10742792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300026041\|Ga0207639_11082716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300026088\|Ga0207641_10832779	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300026089\|Ga0207648_11000054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	783	Open in IMG/M
3300026095\|Ga0207676_11113622	Not Available	781	Open in IMG/M
3300026116\|Ga0207674_10270389	Not Available	1647	Open in IMG/M
3300026142\|Ga0207698_11412013	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300028380\|Ga0268265_10370571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300031548\|Ga0307408_100311893	Not Available	1322	Open in IMG/M
3300031740\|Ga0307468_100927069	Not Available	758	Open in IMG/M
3300031854\|Ga0310904_11389797	Not Available	511	Open in IMG/M
3300032005\|Ga0307411_10145574	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300032005\|Ga0307411_10702488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	61.06%
Environmental	Environmental	38.94%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	61.06%
Terrestrial	Environmental → Terrestrial	38.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	26.55%
Roots	Host-Associated → Plants → Roots	3.54%
Rhizome	Host-Associated → Plants → Rhizome	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.01%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.47%
Loam	Environmental → Terrestrial → Soil → Loam	7.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.08%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.77%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	7.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1113620721	3300000956	Soil	SKQSNGHDSGPSLFQKVANTPAFERVRQEAGNIGDAVVDELSKTAKTVVLPALITSLRNFIGNKLPNAPHESRSATYQPSLERNQ*
C688J35102_1198148902	3300002568	Soil	SAALAAPAAAVHAKQGNGSHDSGPNFLQKIANTPAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS*
rootL2_101202741	3300003322	Sugarcane Root And Bulk Soil	GPNFFQKLTNTPAYERVRSEAGNIGDAFVQELSNTAKTVVLPALITSLRNFIGAHLPNAETKKQTYQPSLERNPT*
Ga0062593_1021707532	3300004114	Soil	DNGKHDTGPSFFQKVTNTHAFERVRDEAGNIGDAFVQELSKTAKTVVLPALIMSLRNFIGDYLPNAEKRPSYQPELERNPT*
Ga0062592_1012174411	3300004480	Soil	RHYAAQEFVTPTKQGNGTHDTGPNFFQKLTNTQAFGRVRDEAGNIGDAVVQELSKTAKTVVIPALITSLRNFIGDHLPNAEKRPANYQPSLERNPS*
Ga0062594_1031748152	3300005093	Soil	AAPLYAKPGNGTHHDTGPNLFQKLANTPAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPSLERNPT*
Ga0065704_100937111	3300005289	Switchgrass Rhizosphere	QPPIQSTYRNGKHDSGPSFFQKVAQTPAFERVRDEAGNIGDAVVQELSKTAKTVVIPALITSLRNFIGDHLPNVQKQPATNYQPSLDRG*
Ga0065704_108276831	3300005289	Switchgrass Rhizosphere	MATPGGPRPKQQYGNGSHDSGPSIFQKVVNTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNANKQTAQGTPHERDQSPSYQPALERNPS*
Ga0065712_101985911	3300005290	Miscanthus Rhizosphere	PSFFQKVANTPAFERVKDEAGNIGDAVVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKRPSHQPESRPSYQPELERNPS*
Ga0065715_108068551	3300005293	Miscanthus Rhizosphere	SNGHDSGPGFFQKVVHTPAFERVRDEAGNIGDAFVQELSKTAKAVVLPALITSLRNFIGDHLPNAEKQQPSQQQRPSGYQPALERGSDH*
Ga0065705_110224042	3300005294	Switchgrass Rhizosphere	PKQQYGNGSHDTGPSLFQKVVNTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNANKQTAQGTPHERDQSPSYQPALERNPS*
Ga0065705_111746641	3300005294	Switchgrass Rhizosphere	PAFYKVKEEAGNIGDAVVKELSNTAKTVVLPALITSLRNFIGDYLPNADKRTTQGASTQRDQSSSSYQPSLERNPT*
Ga0065707_101312321	3300005295	Switchgrass Rhizosphere	GMHAKHGNGTHDSGPNIFQKIANTQAFDRVRNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPSLERNPS*
Ga0065707_102460811	3300005295	Switchgrass Rhizosphere	PAGMYSKPENGLHDKGPNVFQKIANTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKKTSSYQPSLERNPS*
Ga0068869_1004630671	3300005334	Miscanthus Rhizosphere	GTHDSGPNFIQKLTNTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS*
Ga0070680_1011620681	3300005336	Corn Rhizosphere	MTMGGSMSPRQDNGKHDTGPSLFQKVTNTHAFERVRDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKRPSQQPERRPSYQPELERNPS*
Ga0070673_1015640412	3300005364	Switchgrass Rhizosphere	PSFFQKVVHTQAFEKVRDEAGNIGDAFVQELSKTAKTVVLPALIMSLRNFIGDHLPNAQKQPTYQPSLERGSDV*
Ga0070659_1010811102	3300005366	Corn Rhizosphere	VHAKQGNGTHDSGPNFLQKIANTPAFEKVKDEAGNIGDAFVQELSNTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS*
Ga0070667_1013353602	3300005367	Switchgrass Rhizosphere	SGAAVAAPLYAKPGNGTHHDTGPNFIQKLANTQAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPALERNPT*
Ga0070705_1000160274	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GNGTHDTGPSFFQKMVHTPAFERVKDEAGNIGDAVVQELSKTAKQVVLPALITSLRNFIGDYLPNANKQPSQGTQHNQPQQYQPALERNPS*
Ga0070694_1013535832	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	AASNAVHTKQGNGMHDSGPSFFTKIAQTPAFERVKNEAGNVGDSVVQELSKVAKTVVVPALITSLRNFIGDHLPNAEKRSTSYQPSLERNPS*
Ga0070694_1016115251	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GPGFFQKVANTHAFERVKDEAGNIGDAIVQELSKTAKTVVLPALMVSLRNFIGDYLPNVGKEQQQQSKYQPALERNPS*
Ga0070681_119676031	3300005458	Corn Rhizosphere	NYASSASMAPSTPTTHAKPENGTHDKGPNFFQKLTHSSAFDRVRNEASNVGDAAVQELSKVAKTVILPALITSLRNFIGDHLPNAETKATSYQDTKKSSYQPSLERNAS*
Ga0068867_1023531792	3300005459	Miscanthus Rhizosphere	APMHVKQGNGTHDTGPNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRPEQRSPSYQPSLERNPS*
Ga0068853_1011178582	3300005539	Corn Rhizosphere	SKPENGKHDTGPGFFQKVAQTPAFERVRDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKKSATYEPAREH*
Ga0070696_1019444151	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSTRARQSNGTHDSGPGFFTKVANSPAFGRVKDEAGNVGDAIVQELSKTAKTVVLPALITSLRNFIGDHLPHAKTEPQQQQRSTYQPALERNPS*
Ga0068854_1004616332	3300005578	Corn Rhizosphere	GSTSYGNGSHESGPGFFQKVANTHAFERVKDEAGNIGDAIVQELSKTAKTVVLPALMVSLRNFIGDYLPNVGKEQQQQSKYQPALERNPS*
Ga0068864_1017947131	3300005618	Switchgrass Rhizosphere	MTAPAAGVHAKQGNGTHDSGPNIFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKSSYEPSLERNPS*
Ga0068851_109638381	3300005834	Corn Rhizosphere	HDTGPNFFQKIANTQAFDRVRDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRPEQRPEQKSTSYQPSLERNPS*
Ga0068870_114638181	3300005840	Miscanthus Rhizosphere	SYGNGSHESGPGFFQKVANTHAFERVKDEAGNIGDAIVQELSKTAKTVVLPALMVSLRNFIGDYLPNVGKEQQQQSKYQPALERNPS*
Ga0068863_1002650633	3300005841	Switchgrass Rhizosphere	FFQKLANTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKRTNAEVRSSTYQPSLERNPS*
Ga0068858_1003194692	3300005842	Switchgrass Rhizosphere	DMTSAPMTPPVSTRARQSNGTHDSGPGFFTKVANSPAFGRVKDEAGNVGDAIVQELSKTAKTVVLPALITSLRNFIGDHLPHAKTEPQQQQRSTYQPALERNPS*
Ga0068860_1020223061	3300005843	Switchgrass Rhizosphere	APLYAKPGNGTHHDTGPNFFQKLTNTQAFEKVKDEAGNIGDAFVKELSNTAKTVVLPALITSLRNFIGDHLPNADTKRAEQRSPGYQPSLERNPS*
Ga0068862_1004006972	3300005844	Switchgrass Rhizosphere	LANTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKRTNAEVRSSTYQPSLERNPS*
Ga0075431_1019919432	3300006847	Populus Rhizosphere	GTGAAMATPGGPRPKQQYGNGSHDTGPSLFQKVVNTPAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAKKQESYQPSLERNPS*
Ga0075433_101895553	3300006852	Populus Rhizosphere	SFFQKVAQTPAFERVRDEAGNIGDAVVQELSKTAKTVVIPALITSLRNFIGDHLPNVQKQPATNYQPSLDRG*
Ga0075425_1015229521	3300006854	Populus Rhizosphere	KHESGPSFFQKVANTQAFERVKDEAGNIGDALVQELTKTAKTLVLPAIITSLRNFIGDYLPNADKINAQPPSAQRTTTYQPELERNPS*
Ga0075425_1030806552	3300006854	Populus Rhizosphere	IFQKVVNTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNANKQTAQGTPHERDQSPSYQPALERNPS*
Ga0075424_1007737381	3300006904	Populus Rhizosphere	FQKVANTPAFERVKDEAGNIGDAIVQELSKTAKTVVLPALITSLRNFIGDYLPNANKQESQETQTQRNQSASYQPSLERNPS*
Ga0079219_108306821	3300006954	Agricultural Soil	PLIPSRPENGKHDTGPNFFQKVVQTPAFERVRDEAGNIGDAVVQELSKTAKTVVLPALITSLRNFIGDHLPNAQKQQTYQPSLERGSDV*
Ga0079218_133996141	3300007004	Agricultural Soil	GPSFFEKVTNTPAFERVRDEAGNIGDAIVQELSKTAKTVVLPALITSLRNFIGDYLPNADKETSQASYSQRNQRDQSRPGSYQPELERNPS*
Ga0105245_106854042	3300009098	Miscanthus Rhizosphere	IASGAAVAAPLYAKPGNGTHHDTGPNLFQKLANTPAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPSLERNPT*
Ga0105247_112722802	3300009101	Switchgrass Rhizosphere	MAAPAAGVHAKQANGTHDSGPNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKQTTN
Ga0114129_108825041	3300009147	Populus Rhizosphere	AFDRVRDEAGNIGDAIVQELSKTAKTVVLPALMTSLRNFIGDYLPNAEKGTTQGTPAPRDQSRAGTSTYQPSLERNPS*
Ga0105243_107964441	3300009148	Miscanthus Rhizosphere	NGTHDSGPNFFQKIANTTAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKSSYEPALERNPS*
Ga0105241_115993712	3300009174	Corn Rhizosphere	ASQGIISSPAMAAPNVMHTKHGNGTHDSGPNLFQTIANTPAFERVKSEAGNVGDSVVQELSKVAKTVVIPALVTSLRNFIGDHLPNAEKKTTTTTSYQPSLERNPS*
Ga0105248_102489941	3300009177	Switchgrass Rhizosphere	GTHDTGPNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPALERNPT*
Ga0105249_102638633	3300009553	Switchgrass Rhizosphere	KIANTQAFDRVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKQTTNYQPSLERNPS*
Ga0126307_104811751	3300009789	Serpentine Soil	GQSTIHSKQENGTHSSGPNFFQKVANTQAFERVRNEAGNLGDAFVEELSKTAKTVVLPALITSLRNFIGDYLPNTDKRPSTTTAQQEQPRSYQPSLERNPS*
Ga0126304_105500532	3300010037	Serpentine Soil	LASGAAMAAPGQSTIHSKQGNGTHASGPNFFQKVANTPAFERVRNEAGNIGDAVVEELSKTAKTVVLPALITSLRNFIGDYLPNAEKRPSATSAQQDRSRTYQPSLERNPS*
Ga0126308_101387941	3300010040	Serpentine Soil	GFFQKVANTPAFERVKDEAGNIGDAVVKELSNTAKTVVLPALITSLRNFIGGYLPNTERSQTTSSSQRDQSRGGTPAYEPSLERNPS*
Ga0126314_100616954	3300010042	Serpentine Soil	SSAPMTAPVYTKQGNGTHHDTGPNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPSLERNPT*
Ga0126314_111736891	3300010042	Serpentine Soil	HDSGPNLFQKIANTPAFERVRNEAGNIGDAVVEELSKTAKTVVLPALITSLRNFIGDYLPKAETHSEQRTPQATSTYQPLLERNPS*
Ga0126314_114837791	3300010042	Serpentine Soil	QNFVSSAAMAAPAGIHAKQGNGTHDSGPNFFQKVANTPAFEKVKNEAGNIGDAFVQELSNTAKTVVLPALITSLRNFIGDYLPNAEKREEQRTANYQPSLDRNPS*
Ga0126310_100916221	3300010044	Serpentine Soil	THDEGPGFFQKVANTPAFERVKDEAGNIGDAVVKELSNTAKTVVLPALITSLRNFIGGYLPNTEKSQTTSSSQRDQSRGGTPAYEPSLERNPS*
Ga0126310_115204162	3300010044	Serpentine Soil	AAPAGIHAKQENGTHDSGPNLFQKIANTQAFDKVKSEAGNLGDAFVQELSNTAKTVVLPALITSLRNFIGDRLPNAEKRSTTTDYQPSLERNPS*
Ga0126311_111277832	3300010045	Serpentine Soil	GPGFFQKVANTPAFERVKDEAGNIGDAVVKELSNTAKTVVLPALITSLRNFIGGYLPNTERSQTTSSSQRDQSRGGAPGYEPSLERNPS*
Ga0126382_104770692	3300010047	Tropical Forest Soil	GPSFFQKMVHTPAFERVKDEAGNIGDAFVQEVSKTAKQIVLPALITSLRNFIGDHLPNANKQTGQGAQASYQPSLERNTS*
Ga0126382_113384542	3300010047	Tropical Forest Soil	AAQSMMEGAAIAPRAGVSAKQGNGTHDTGPGFFYKMVHTPAFERVKDEAGNIGDAFVQELSKTAKQVVLPALITTLRNFIGDHLPNASKQQTYQPSLERNPS*
Ga0126370_123556032	3300010358	Tropical Forest Soil	GPGFFQKMVHTPAFERVKDEAGNIGDALVQELSKTAKQVVLPALITSLRNFIGDYLPNAEKQTSPGTQRNQSQSYQPALERNPS*
Ga0126376_117831862	3300010359	Tropical Forest Soil	SPAAPAPQAGMEAKQGNGDSGPGFFQKVANTQAFERVRDEVGNIGDAFVQELSKTAKSVVLPALITSLRNFIGEHLPNAPTQQRTYQPSLERNPG*
Ga0126377_132872161	3300010362	Tropical Forest Soil	HDTGPGFFYKMVHTPAFERVKDEAGNIGDAFVQELSKTAKQVVLPALITTLRNFIGDHLPNASKQQTYQPSLERNPS*
Ga0134124_105062012	3300010397	Terrestrial Soil	GGPRPKQQYGNGSHDTGPSIFQKVVNTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNANKQTAQGTPHERDQSPSYQPALERNPS*
Ga0134127_101864581	3300010399	Terrestrial Soil	HDSGPNFFQKIANTQAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRAANYQPSLERNPS*
Ga0134127_108390552	3300010399	Terrestrial Soil	GSHDTGQSFFQKVANTQAFERVKDEAGNIGDAIVQELSKTAKTVVLPALITSLRNFIGDYLPNANKQEQGTQTQRNQPPSYQPSLERNPS*
Ga0134127_123384042	3300010399	Terrestrial Soil	TQGIASNAPMTAPVHVKQGNGTLHDTGPNFFQKLTNTQAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPSLERNPT*
Ga0134122_114491461	3300010400	Terrestrial Soil	DNGKHDTGPSFFQKVAQTPAFEKVRDEAGNIGDAIVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKQPKYQPSLEH*
Ga0134123_134987291	3300010403	Terrestrial Soil	MHAKHGNGSHDSGPNIFQKIANTQAFDRVRNEAGNIGDAFVEELSKTAKTVVLPALITSLRNFIGDHLPNAEKKEPSTYQPSMERGSVA*
Ga0150985_1176808862	3300012212	Avena Fatua Rhizosphere	PAAAVHAKQGNGSHDSGPNFLQKIANTPAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS*
Ga0150984_1032153712	3300012469	Avena Fatua Rhizosphere	ASSAALAAPAAAVHAKQGNGSHDSGPNFLQKIANTPAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS*
Ga0157373_112115522	3300013100	Corn Rhizosphere	HDTGPSFFTKIVNTPAFERVKDEAGNIGNALVQEISKTAKNVVLPALMTSLRNFIGDHLPNADKQPSSQAEQRNQSQSQSYQPSLERNPS*
Ga0157378_103867501	3300013297	Miscanthus Rhizosphere	AMATPGGPRPKQQYGNGSHDTGPGFFQKMAHTPAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNANKQEQGTQTQRNQSPSYQPSLERNPS*
Ga0157375_136253101	3300013308	Miscanthus Rhizosphere	THAFERVKDEAGNIGDAIVQELSKTAKTVVLPALMVSLRNFIGDYLPNVGKEQQQQSKYQPALERNPS*
Ga0075326_10689361	3300014271	Natural And Restored Wetlands	PLLSSSPAVSAPQAGFISKQTNGQESGPGFFQKVASTPAFERVRQEAGNIGDAVVQELSKTAKTVVLPALMTSLRNFIGERLPNAGRSTYQPSLERNQ*
Ga0075327_10852462	3300014272	Natural And Restored Wetlands	NGQESGPGFFQKVASTPAFERVRQEAGNIGDAVVQELSKTAKTVVLPALMTSLRNFIGERLPNAGRSTYQPSLERNQ*
Ga0163163_108435511	3300014325	Switchgrass Rhizosphere	KHDTGPSFFQKVVHTQAFEKVRDEAGNIGDAFVQELSKTAKTVVLPALIMSLRNFIGDHLPNAQKQPTYQPSLERGSDV*
Ga0163163_113827701	3300014325	Switchgrass Rhizosphere	PNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRPEQRSPNYQPSLERNPS*
Ga0163163_120156742	3300014325	Switchgrass Rhizosphere	SGPNFFQKLTNTQAFEKVKDEAGNIGDALVKEISNTAKTVVLPALITSLRNFIGDHLPNANATADTKKQSYQPSLDRNPT*
Ga0163163_126205441	3300014325	Switchgrass Rhizosphere	PNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRQEQRSPSYQPSLERNPS*
Ga0132258_131080272	3300015371	Arabidopsis Rhizosphere	FFQKLANTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKRTPAETRSPSYQPSLERNPS*
Ga0132257_1013359932	3300015373	Arabidopsis Rhizosphere	ATYENGKHESGPSFFQKVANTQAFERVKDEAGNIGDALVQELTKTAKTLVLPAIITSLRNFIGDYLPNADKINAQPPSAQRTTTYQPELERNPS*
Ga0132255_1050572651	3300015374	Arabidopsis Rhizosphere	AQSPMRTKESNGHDSGPSFFQKVAQTPAFERVRDEAGNIGDAFVQELTKTAKTVVLPALITSLRNFIGDHLPNAEKKPPTYQPALERGSDH*
Ga0182009_104831072	3300021445	Soil	DTGPSFFQKMVHTPAFERVKDEAGNIGDAVVQELSKTAKQVVLPALITSLRNFIGDYLPNANKQPSQGTQHNQPQQYQPALERNPS
Ga0207654_111712102	3300025911	Corn Rhizosphere	DSGPSFFQKVANTQAFERVKDEAGNIGDALVQELTKTAKTLVLPAIITSLRNFIGDYLPNADKINAQPPSAQRTTTYQPELERNPS
Ga0207660_116809362	3300025917	Corn Rhizosphere	YASQSMAETARPMTMGGSMSPRQDNGKHDTGPSLFQKVTNTHAFERVRDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKRPSQQPERRPSYQPELERNPS
Ga0207662_108224493	3300025918	Switchgrass Rhizosphere	PNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPALERNPT
Ga0207657_114878111	3300025919	Corn Rhizosphere	SSAAMAAPAAGVHAKQGNGTHDSGPNFLQKIANTPAFEKVKDEAGNIGDAFVQELSNTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS
Ga0207659_109360731	3300025926	Miscanthus Rhizosphere	NGTHDTGPNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPALERNPT
Ga0207687_102293331	3300025927	Miscanthus Rhizosphere	IASGAAVAAPLYAKPGNGTHHDTGPNLFQKLANTPAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPSLERNPT
Ga0207687_109031591	3300025927	Miscanthus Rhizosphere	PGVHAKQGNGTHDSGPNFFQKIANTQAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRAEERAPNYQPALERNPS
Ga0207690_104772902	3300025932	Corn Rhizosphere	MAAPAAGVHAKQGNGTHDSGPNFLQKIANTPAFEKVKDEAGNIGDAFVQELSNTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS
Ga0207709_102302821	3300025935	Miscanthus Rhizosphere	AMAAPSTIHTKQSNGTHDSGPNFFQKIANTQAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRAANYQPSLERNPS
Ga0207709_107343371	3300025935	Miscanthus Rhizosphere	AAQNLVNSSAAMPTPSANLHAKQGNGTHDSGPNFIQKLTNTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS
Ga0207711_112222622	3300025941	Switchgrass Rhizosphere	QGNGTHDSGPNFFQKIANTTAFEKVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKSSYEPSLERNPS
Ga0207711_116712691	3300025941	Switchgrass Rhizosphere	PNLFQKLANTPAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNADTKKQSYQPSLERNPT
Ga0207689_111450052	3300025942	Miscanthus Rhizosphere	TLTSPAPMSPQAGIGSKPGNGMHDSGPGFFQKVASSQAFERVKDEAGNVGDAIVQELSKTAKTVVVPALITTLRNFIGEYLPNVQSQGQSTEREQPRPQRSPYEPALERNPS
Ga0207651_108527031	3300025960	Switchgrass Rhizosphere	TGPSFFQKVTNTHAFERVRDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKRPSQQPERRPSYQPELERNPS
Ga0207712_108696261	3300025961	Switchgrass Rhizosphere	KIANTQAFDRVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKQTTNYQPSLERNPS
Ga0207640_100860561	3300025981	Corn Rhizosphere	FASNASMAAPSVMHTKQSNGTHDSGPNFFQKIANTQAFDRVKNEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRAANYQPSLERNPS
Ga0207677_113674871	3300026023	Miscanthus Rhizosphere	ARPLTQARIDNGNHESGPSFFQKVVHTQAFEKVRDEAGNIGDAVVQELSKTAKNVVLPALITSLRNFIGDHLPNVQKQQTYQPSLERGSDV
Ga0207703_107427921	3300026035	Switchgrass Rhizosphere	AGAAMATPGGPRTGKQPANGSHDTGPSFFSKVVNTPAFERVKDEAGNIGEAVMQELSNTAKTVVLPALITSLRNFIGDYLPNVNKQTSQATQPNQPQGASYQPSLERNPS
Ga0207639_110827161	3300026041	Corn Rhizosphere	VVHTKQGNGMHDSGPSFFTKIAQTPAFERVKNEAGNVGDSVVQELSKVAKTVVVPALITSLRNFIGDHLPNAEKRSTSYQPSLERNPS
Ga0207641_108327791	3300026088	Switchgrass Rhizosphere	NTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNVNKQTAQGTPHERDQSPSYQPALERNPS
Ga0207648_110000542	3300026089	Miscanthus Rhizosphere	HDSGPNFIQKLTNTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGSHLPNADTKKSSYEPSLERNPS
Ga0207676_111136221	3300026095	Switchgrass Rhizosphere	KHENGTHDSGPNLFQKLANTPAFERVKSEAGNVGDSVVQELSKVAKTVVIPALVTSLRNFIGDHLPNAEKKTTNTSYQPSLERNPS
Ga0207674_102703894	3300026116	Corn Rhizosphere	HDTGPSFFQKMVHTPAFERVKDEAGNIGDAVVQELSKTAKQVVLPALITSLRNFIGDYLPNANKQPSQGTQHNQPQQYQPALERNPS
Ga0207698_114120131	3300026142	Corn Rhizosphere	KVANSPAFERVKDEAGNVGDAIVQELSKTAKTVVLPALITSLRNFIGDHLPHAKTEPQQQQRSTYQPALERNPS
Ga0268265_103705711	3300028380	Switchgrass Rhizosphere	SHDTGPNFFQKLANTQAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNAEKRTNAEVRSSTYQPSLERNPS
Ga0307408_1003118932	3300031548	Rhizosphere	GPNFFQKIANTTAFEKVRDEAGNIGDAVVQELSNTAKTVVLPALITSLRNFIGDYLPNAPTRAEQRPQGTPAYQPSLERNPS
Ga0307468_1009270691	3300031740	Hardwood Forest Soil	HGNGSHDSGPSFFQKVAHTPAFERVRDEAGNIGDAFVQELSKTAKSVVLPALIMSLRNFIGDHLPNAEKQPSQPKQASSYQPAMERNPS
Ga0310904_113897972	3300031854	Soil	QPPIQSTYRNGKHDSGPSFFQKVAQTPAFERVRDEAGNIGDAVVQELSKTAKTVVIPALITSLRNFIGDHLPNVQKQPATNYQPSLDRG
Ga0307411_101455741	3300032005	Rhizosphere	SHDTGRSLFQKVVNTPAFERVKDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDYLPNANKQTAQGTPNQRDQSPSYQPSLERNPS
Ga0307411_107024882	3300032005	Rhizosphere	QYTAQSLAGTAASMAPRLDNGKHDTGPSFFQKVTNTPAFERVRDEAGNIGDAFVQELSKTAKTVVLPALITSLRNFIGDHLPNAEKRPSYQPELERNPT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F082295

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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