Metagenome / Metatranscriptome Family F082227

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082227
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	65 residues
Representative Sequence	MIVPVDIVAVQVNANNSLFVTTGVDYDSDGAVVGSEITSQYTLNPGDSLDGQPTEVVNIANALW
Number of Associated Samples	86
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	60.18 %
% of genes from short scaffolds (< 2000 bps)	84.96 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (46.018 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (27.434 % of family members)
Environment Ontology (ENVO)	Unclassified (63.717 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (63.717 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.87% β-sheet: 22.83% Coil/Unstructured: 66.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00436	SSB	0.88
PF12684	DUF3799	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.88
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.98 %
Unclassified	root	N/A	46.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Viruses	superkingdom	All Organisms → Viruses	38.05 %
cellular organisms	root	All Organisms → cellular organisms	15.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	33.63 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.16 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	1.77 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	33.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.19 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	4.42 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	1.77 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	33.63 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	4.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.54 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	1.77 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	33.63 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	4.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.54 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	1.77 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1.77 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	33.63 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	4.42 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	2.65 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	1.77 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1.77 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.88 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33.63 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	4.42 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	2.65 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	1.77 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1.77 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.88 %
Pusillimonas (ex Stolz et al. 2005)	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005)	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33.63 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	4.42 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	2.65 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	1.77 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1.77 %
unclassified Pusillimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas	0.88 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.02 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33.63 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	4.42 %
Massilia terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia terrae	2.65 %
archaeon SCG-AAA382B04	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	1.77 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1.77 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.88 %
Pusillimonas sp. (ex Stolz et al. 2005)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10060004	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1188	Open in IMG/M
3300001282\|B570J14230_10095179	Not Available	903	Open in IMG/M
3300002384\|B570J29636_1004037	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300003277\|JGI25908J49247_10000954	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9072	Open in IMG/M
3300003277\|JGI25908J49247_10017616	All Organisms → cellular organisms → Bacteria → Proteobacteria	2153	Open in IMG/M
3300003277\|JGI25908J49247_10084529	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	778	Open in IMG/M
3300005581\|Ga0049081_10177726	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	770	Open in IMG/M
3300006920\|Ga0070748_1364175	Not Available	508	Open in IMG/M
3300007544\|Ga0102861_1009174	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2342	Open in IMG/M
3300007708\|Ga0102859_1054980	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1108	Open in IMG/M
3300007708\|Ga0102859_1079785	Not Available	930	Open in IMG/M
3300008055\|Ga0108970_11481373	Not Available	659	Open in IMG/M
3300008055\|Ga0108970_11508363	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	880	Open in IMG/M
3300008259\|Ga0114841_1056514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1880	Open in IMG/M
3300008266\|Ga0114363_1051512	All Organisms → Viruses	1636	Open in IMG/M
3300008266\|Ga0114363_1088577	All Organisms → Viruses	1137	Open in IMG/M
3300008266\|Ga0114363_1110755	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	972	Open in IMG/M
3300008266\|Ga0114363_1114065	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	950	Open in IMG/M
3300008448\|Ga0114876_1066786	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1546	Open in IMG/M
3300008450\|Ga0114880_1136181	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	903	Open in IMG/M
3300009056\|Ga0102860_1029395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Pusillimonas (ex Stolz et al. 2005) → unclassified Pusillimonas → Pusillimonas sp. (ex Stolz et al. 2005)	1441	Open in IMG/M
3300009085\|Ga0105103_10445863	Not Available	721	Open in IMG/M
3300009159\|Ga0114978_10164685	Not Available	1420	Open in IMG/M
3300009159\|Ga0114978_10560808	Not Available	664	Open in IMG/M
3300009161\|Ga0114966_10566082	Not Available	638	Open in IMG/M
3300009183\|Ga0114974_10312881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia terrae	920	Open in IMG/M
3300009184\|Ga0114976_10568749	Not Available	578	Open in IMG/M
3300009812\|Ga0105067_1081411	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	562	Open in IMG/M
3300010354\|Ga0129333_10156917	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2087	Open in IMG/M
3300010885\|Ga0133913_11214975	Not Available	1932	Open in IMG/M
3300011011\|Ga0139556_1027629	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	829	Open in IMG/M
3300011268\|Ga0151620_1012083	Not Available	3077	Open in IMG/M
3300012017\|Ga0153801_1013985	Not Available	1442	Open in IMG/M
3300012729\|Ga0157625_1039867	Not Available	663	Open in IMG/M
3300012769\|Ga0138279_1094257	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1917	Open in IMG/M
3300013004\|Ga0164293_10132555	Not Available	1873	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10601281	Not Available	590	Open in IMG/M
3300013372\|Ga0177922_11019006	Not Available	752	Open in IMG/M
3300015050\|Ga0181338_1014461	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1268	Open in IMG/M
3300017699\|Ga0181345_102076	Not Available	785	Open in IMG/M
3300017716\|Ga0181350_1011871	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2482	Open in IMG/M
3300017716\|Ga0181350_1026644	Not Available	1602	Open in IMG/M
3300017716\|Ga0181350_1097718	Not Available	726	Open in IMG/M
3300017736\|Ga0181365_1024933	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1508	Open in IMG/M
3300017761\|Ga0181356_1028636	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2004	Open in IMG/M
3300017777\|Ga0181357_1030374	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2134	Open in IMG/M
3300017777\|Ga0181357_1056698	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1521	Open in IMG/M
3300017777\|Ga0181357_1213518	Not Available	684	Open in IMG/M
3300017777\|Ga0181357_1327569	Not Available	514	Open in IMG/M
3300017778\|Ga0181349_1050139	Not Available	1640	Open in IMG/M
3300017780\|Ga0181346_1274590	Not Available	580	Open in IMG/M
3300017784\|Ga0181348_1086533	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1237	Open in IMG/M
3300017784\|Ga0181348_1200713	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	715	Open in IMG/M
3300019781\|Ga0181360_104155	Not Available	1231	Open in IMG/M
3300019781\|Ga0181360_116711	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	600	Open in IMG/M
3300019781\|Ga0181360_117485	Not Available	585	Open in IMG/M
3300019783\|Ga0181361_102392	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1385	Open in IMG/M
3300019783\|Ga0181361_111403	Not Available	692	Open in IMG/M
3300019784\|Ga0181359_1036268	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1910	Open in IMG/M
3300020083\|Ga0194111_10494809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	787	Open in IMG/M
3300020109\|Ga0194112_10279605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia terrae	1280	Open in IMG/M
3300020155\|Ga0194050_1118958	Not Available	716	Open in IMG/M
3300020197\|Ga0194128_10108914	Not Available	1691	Open in IMG/M
3300020527\|Ga0208232_1015453	Not Available	1132	Open in IMG/M
3300020536\|Ga0207939_1025823	Not Available	793	Open in IMG/M
3300020574\|Ga0208221_1029124	Not Available	1065	Open in IMG/M
3300021091\|Ga0194133_10155631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia terrae	1617	Open in IMG/M
3300021376\|Ga0194130_10094579	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1960	Open in IMG/M
3300021376\|Ga0194130_10505977	Not Available	618	Open in IMG/M
3300021424\|Ga0194117_10402748	Not Available	627	Open in IMG/M
3300022190\|Ga0181354_1009973	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2764	Open in IMG/M
3300022407\|Ga0181351_1200243	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon SCG-AAA382B04	668	Open in IMG/M
3300024348\|Ga0244776_10088067	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2344	Open in IMG/M
3300024562\|Ga0256336_1040335	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300025848\|Ga0208005_1244520	Not Available	553	Open in IMG/M
3300027659\|Ga0208975_1077116	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	989	Open in IMG/M
3300027688\|Ga0209553_1104981	Not Available	1014	Open in IMG/M
3300027732\|Ga0209442_1317206	Not Available	532	Open in IMG/M
3300027734\|Ga0209087_1131182	All Organisms → cellular organisms → Bacteria → Proteobacteria	1026	Open in IMG/M
3300027756\|Ga0209444_10124929	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1017	Open in IMG/M
3300027797\|Ga0209107_10001195	Not Available	14473	Open in IMG/M
3300027797\|Ga0209107_10119368	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1386	Open in IMG/M
3300027798\|Ga0209353_10145347	Not Available	1059	Open in IMG/M
3300027798\|Ga0209353_10440940	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	528	Open in IMG/M
(restricted) 3300028557\|Ga0247832_1225414	Not Available	651	Open in IMG/M
3300031746\|Ga0315293_10734591	Not Available	730	Open in IMG/M
3300031758\|Ga0315907_10288749	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1349	Open in IMG/M
3300031758\|Ga0315907_10369329	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1163	Open in IMG/M
3300031834\|Ga0315290_11184675	Not Available	635	Open in IMG/M
3300031885\|Ga0315285_10103858	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2469	Open in IMG/M
3300031885\|Ga0315285_10938306	Not Available	525	Open in IMG/M
3300031951\|Ga0315904_10385148	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1276	Open in IMG/M
3300031951\|Ga0315904_10681088	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	868	Open in IMG/M
3300031952\|Ga0315294_10194334	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2023	Open in IMG/M
3300031963\|Ga0315901_11118054	Not Available	540	Open in IMG/M
3300031999\|Ga0315274_10709909	Not Available	1085	Open in IMG/M
3300032164\|Ga0315283_12277318	Not Available	531	Open in IMG/M
3300032173\|Ga0315268_10137673	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2314	Open in IMG/M
3300032173\|Ga0315268_10407273	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1331	Open in IMG/M
3300032173\|Ga0315268_11871133	Not Available	613	Open in IMG/M
3300032256\|Ga0315271_10151279	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1819	Open in IMG/M
3300032401\|Ga0315275_11684363	Not Available	676	Open in IMG/M
3300033233\|Ga0334722_10152791	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1728	Open in IMG/M
3300033233\|Ga0334722_10208166	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1447	Open in IMG/M
3300033233\|Ga0334722_10649365	Not Available	751	Open in IMG/M
3300034012\|Ga0334986_0119663	Not Available	1554	Open in IMG/M
3300034013\|Ga0334991_0002365	All Organisms → cellular organisms → Bacteria	15429	Open in IMG/M
3300034061\|Ga0334987_0159521	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1639	Open in IMG/M
3300034064\|Ga0335001_0044003	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2599	Open in IMG/M
3300034066\|Ga0335019_0830978	Not Available	519	Open in IMG/M
3300034073\|Ga0310130_0303020	Not Available	509	Open in IMG/M
3300034095\|Ga0335022_0043712	All Organisms → Viruses	2954	Open in IMG/M
3300034283\|Ga0335007_0241584	Not Available	1223	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.23%
Host-Associated	Host-Associated	1.77%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.46%
Terrestrial	Environmental → Terrestrial	1.77%
Plants	Host-Associated → Plants	1.77%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	89.38%
Marine	Environmental → Aquatic → Marine	7.08%
Leaf	Host-Associated → Plants → Leaf	1.77%
Soil	Environmental → Terrestrial → Soil	0.89%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.89%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	46.02%
Lentic	Environmental → Aquatic → Freshwater → Lentic	36.28%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.42%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.42%
Coastal	Environmental → Aquatic → Marine → Coastal	2.65%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.89%
River	Environmental → Aquatic → Freshwater → River	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.74%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	30.09%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.27%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.42%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.42%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	3.54%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.65%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	27.43%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.27%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.73%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	7.08%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	4.42%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.42%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.42%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	3.54%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	2.65%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.65%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	1.77%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.77%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.77%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.89%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.89%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.89%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.89%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002384	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012729	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES157 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012769	Freshwater microbial communities from Lake Montjoie, Canada - M_140205_X_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017699	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.N	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300019781	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM15.S.D	Environmental	Open in IMG/M
3300019783	Freshwater viral communities from Lake Michigan, USA - Sp13.ND.MM110.S.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020109	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400m	Environmental	Open in IMG/M
3300020155	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L239-10m	Environmental	Open in IMG/M
3300020197	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015037 Kigoma Deep Cast 65m	Environmental	Open in IMG/M
3300020527	Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020574	Freshwater microbial communities from Lake Mendota, WI - 26JUN2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021091	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015055 Kigoma Offshore 40m	Environmental	Open in IMG/M
3300021376	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015050 Kigoma 12 surface	Environmental	Open in IMG/M
3300021424	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015009 Mahale N1 surface	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300024562	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025848	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027688	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN (SPAdes)	Environmental	Open in IMG/M
3300027732	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300028557 (restricted)	Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_4m	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031885	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_36	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100600042	3300000756	Freshwater And Sediment	MIVPVNIISVQCNQNNSLFVTTGIDYDSDGAVVGSEITSQYTLNPGDDLTGQPTEVVNIANAIWK*
B570J14230_100951793	3300001282	Freshwater	MIVPVNIVAVQCNQNNSLFVTTGIDYDNSGTIVGSEITSQYTLNPGDDLTGQPTEVVNIANALWTP
B570J29636_10040371	3300002384	Freshwater	MIVPVDIVAVQCNQNNSLFVTTGIDYDSDGAVVGSEIVSQYTLNPGDDLTGQPVEVVN
JGI25908J49247_100009542	3300003277	Freshwater Lake	MIVPVDIVAVQVNANNSLFVTTGIDYDNSGSIVGSEITSQYTLNPGDSLEGQPTEVVNIANAIWK*
JGI25908J49247_100176163	3300003277	Freshwater Lake	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAVVGSEITSQYTLVPGDSLEGQPTEVVNIATAIWK*
JGI25908J49247_100845292	3300003277	Freshwater Lake	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAIVGSEITAQYTLNPGDDLTGQPTEVVNIANAIWK*
Ga0049081_101777262	3300005581	Freshwater Lentic	MIVPVDIVSVQVNQNNSLFVTTGTDYDNNGTIVGSEITSQYTLNPGDSLEGQPTEVVNIANAIWK*
Ga0070748_13641752	3300006920	Aqueous	MIVPVNIVAVKVNQNNSLFVTTGTDYDNSGTIVGSEITSQYTLNPGDSLEGQPIQVVNIANALW
Ga0102861_10091741	3300007544	Estuarine	MIVPVDIVAVQVNQNNSLFVTTGIDYDSDGAIVGSEITSQYTLNPGDSLEGQPVEVVNIANALWTPAV
Ga0102859_10549802	3300007708	Estuarine	MIIPINILTVQVNQDNSLFVTTGIDYDNSGTIVGSEITSQYTLKQGDSLEGQPTEVVNIADALWVVLVVN*
Ga0102859_10797851	3300007708	Estuarine	NQDNSLFVTTGIDYDNSGTIVGSEITSQYTLKQGDSLEGQPTEVVNIADALWVVPVVNQQSE*
Ga0108970_114813733	3300008055	Estuary	MIVPVNIVAVQVNANNSLFVTTGVDYDSDGAVVGSEITSQYTLNPGDDLTGQPTEVVNIANALWTPA
Ga0108970_115083633	3300008055	Estuary	MIVPVNIVAVQVNQNNSLFVTTGVDYDNSGSIVGSEITSQYTLVPGDDLTGQPVEVVN
Ga0114841_10565143	3300008259	Freshwater, Plankton	MIVPVNIVAVQCNQNNSLFVTTGVDYDSDGAVVGSEITAQYTLNPGDSLEGQPTEVVNI
Ga0114363_10515124	3300008266	Freshwater, Plankton	MIVPINIVAVQVNANNSLFVTTGVDYDNDGTVVGQEITSQYTLNPGDSLDGQPTEVVNIANALWPPAPINVPVRPTP*
Ga0114363_10885771	3300008266	Freshwater, Plankton	MIVPVDIVAVQVNANNSLFVTTGVDYDNSGAVVGSEITSQYTLNPGDSLDGQPTEVVNIANALWTPAPINVPV
Ga0114363_11107552	3300008266	Freshwater, Plankton	MIVPVNIVAVQVNQNNSLFVTTGVDYDNDGAVVGSEITSQYTLNPGDDLTGQPPEVVKIANAIWK*
Ga0114363_11140653	3300008266	Freshwater, Plankton	MIVPVDIVAVQVNANNSLFVTTGVDYDNSGSIVGQEITSQYTLNPGDSLDGQPTEVVNIANALWTPAPINVPV
Ga0114876_10667863	3300008448	Freshwater Lake	MIVPVDIVAVQVNANNSLFVTTGVDYDNDGTIVGQEITSQYTLNPGDSLDGQPTEVVNIANALWPPAPINVPVRPTP*
Ga0114880_11361813	3300008450	Freshwater Lake	MIVPVDIVAVQVNQNNSLFVTTGVDYNSDGAVVGSEITSQYTLNPGDDLTGQPTEVVNIANAIWK*
Ga0102860_10293953	3300009056	Estuarine	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAVVGSEITSQYTLNPGDDLTGQPTEVVNIANA
Ga0105103_104458632	3300009085	Freshwater Sediment	MIVPVDIVAVQVNANNSLFVTTGVDYDSDGAVVGSEITSQYTLNPGDSLDGQPTEVVNIANALW
Ga0114978_101646853	3300009159	Freshwater Lake	MIVPVNIVAVQVNQNNSLFVTTGVDYNSDGAIAGSEITAQYTLNPGDDLTGQPVEVVNIANALWT
Ga0114978_105608083	3300009159	Freshwater Lake	MIVPVDIVAVQVNQNNSLFVTTGTDYDNSGTIVGSEITAQYTLNPGDSLEGQPTEVV
Ga0114966_105660821	3300009161	Freshwater Lake	MIVPVNIVAVQCNQNNSLFVTTGTDYDNSGTIVGSEITSQYTLNPGDSLEGQPVEVVNIANALW
Ga0114974_103128811	3300009183	Freshwater Lake	MIVPVNIVAVKVNQNNSLFVTTGIDYDNSGSIVGSEITSQYTLNPGDSLEGQPTDVV
Ga0114976_105687493	3300009184	Freshwater Lake	MIVPVNIVAVQVNRNNSLFVTTGIDYDSDDAVVGSEITSQYTLNPGDDLTGQPTEVVNIA
Ga0105067_10814112	3300009812	Groundwater Sand	MIVPVNIVAVQCNQNNSLFVTTGIDYDSDGAVVGSEIVSQYTLNPGDSLEGQPTEVVNIANAIWK*
Ga0129333_101569176	3300010354	Freshwater To Marine Saline Gradient	MIDSTPVVAVQVNSDNSLLVTNGVDYNKDGVMVGNEITSQYTLVPGDSLDGQPTEVVKIANALWT
Ga0133913_112149751	3300010885	Freshwater Lake	MIVPVNIVAVQVNQNNSLFVTTGIDYDNSGSIVGSEITSQYTLNPGDSLEGQPVEVVNIANALWTPA
Ga0139556_10276292	3300011011	Freshwater	MIVPVDIVAVQVNQNNSLFVTTGVDYDSDGAVVGSEITSQYTLNPGDSLEGQPTEVVNIANAIWK*
Ga0151620_10120837	3300011268	Freshwater	MIVPVNIVTVQVNADNSLFVTTGVDYDNNGVIAASEITAQYTLKPGDSLVGQPTEVTNIANALWPKV*
Ga0153801_10139853	3300012017	Freshwater	MIVPVDIVSVQCNQNNSLFVTTGIDYDSDGAVVGSEITSQYTLVPGDDLTGQPTEVVNIANAIWK*
Ga0157625_10398671	3300012729	Freshwater	VIDPIPVVAIQVNKDNSLFVTTGVDYDKSGTIVGTEITSQYTLVPGDDLTGQPQEVVNLANAL
Ga0138279_10942573	3300012769	Freshwater Lake	MIVPVNIVAVQVNANNSLFVTTGTDYDNSGTIVGSEITSQYTLNPGDSLEGQPIEVVNIASALWTP
Ga0164293_101325551	3300013004	Freshwater	MIVPVNIVAVQCNQNNSLFVTTGVDYDNSGSIVGSEITSQYTLNPGDSLEGQPTEVVN
(restricted) Ga0172367_106012813	3300013126	Freshwater	MIAPTPTVQVQVNANNSLFVTSGIDYDNDGKVVGSEITEQYTLNPGDSLDGQPSEVVKIANALWTP*
Ga0177922_110190063	3300013372	Freshwater	MIVPVNIVAVQCNQNNSLFVTTGVDYDSDGAVVGSEITSQYTLVPGDDLTGQPTEVVNIANAIWK*
Ga0181338_10144613	3300015050	Freshwater Lake	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYTLKPGDSLEGQPTEVVNIANALWPKA*
Ga0181345_1020763	3300017699	Freshwater Lake	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAVVGSEITSQYTLVPGDSLEGQPTEVVNIATAIW
Ga0181350_10118711	3300017716	Freshwater Lake	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYMLKPGDSLEGQPTEVVNIANALWPKA
Ga0181350_10266441	3300017716	Freshwater Lake	MIVPVDIISVQVNQNNSLFVTTGIDYDSDGAIVGSEITAQYTLVPGDDLTGQPTEVVNIANALWTPAV
Ga0181350_10977182	3300017716	Freshwater Lake	MIVPINIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYTLKPGDSLEGQPTEVVNIANALWPKS
Ga0181365_10249333	3300017736	Freshwater Lake	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAVVGSEITSQYTRVPGDSLEGQPTEVVNIATAIWK
Ga0181356_10286361	3300017761	Freshwater Lake	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAVVGSEITSQYTLNPGDSLEGQPTEVVNIANA
Ga0181357_10303743	3300017777	Freshwater Lake	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYTLKPGDSLEGQPTEVVNIANALWPKA
Ga0181357_10566983	3300017777	Freshwater Lake	MIVPINIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYTLKPGDSLEGQPTEVVNIANAL
Ga0181357_12135181	3300017777	Freshwater Lake	VNIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYMLKPGDSLEGQPTEVVNIANALWPKA
Ga0181357_13275692	3300017777	Freshwater Lake	MIVPVDIVAVQVNQNNSLFVTTGVDYDNSGSIVGSEITSQYTLVPGDSLEGQPTEVVSIANALWTPA
Ga0181349_10501391	3300017778	Freshwater Lake	MIVPVDIVAVQVNANNSLFVTTGIDYDNSGSIVGSEITAQYTLNPGDSLEGQPTE
Ga0181346_12745903	3300017780	Freshwater Lake	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYTLKPGDSLEGQPTEVVNIANAL
Ga0181348_10865333	3300017784	Freshwater Lake	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYTLKPGDSLEGQPTEVVNIANALWPKS
Ga0181348_12007131	3300017784	Freshwater Lake	MIIPIDIVTVQVNQDNSLFVTTGIDYDNSGTIVGSEITSQYTLKQGDSLEGQPTEVVNIADALWVV
Ga0181360_1041553	3300019781	Freshwater Lake	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAVVGSEITSQYTLVPGDSLEGQPTEVVNIATAIWK
Ga0181360_1167112	3300019781	Freshwater Lake	PMIVPVDIISVQVNANNSLFVTTGIDYDSDGAIVGSEITAQYTLNPGDDLTGQPTEVVNIANAIWK
Ga0181360_1174851	3300019781	Freshwater Lake	MIVPVNIVSVQCNQNNSLFVTTGIDYDSDGAVVGSEITSQYTLNPGDSLEGQPTEVVNIA
Ga0181361_1023922	3300019783	Freshwater Lake	MIVPVDIISVQVNQNNSLFVTTGVDYDNSGTIVGSEITSQYTLNPGDDLTGQPTEVVNIANAIWK
Ga0181361_1114033	3300019783	Freshwater Lake	MIVPVDIVAVQVNANNSLFVTTGIDYDNSGSIVGSEITSQYTLNPGDSLEGQPTEVVNIANAIWK
Ga0181359_10362682	3300019784	Freshwater Lake	MIVPVNIVAVQVNQNNSLFVTTGIDYDNSGTVVGSEITSQYTLNPGDSLEGQPTEVVNIATAIWK
Ga0194111_104948093	3300020083	Freshwater Lake	MIDQTPTVQVQVNANNSLFVTTGIDYDKDGSIVGSEITEQYTLNPGDSLEGQPSEVVKIANALWTADV
Ga0194112_102796053	3300020109	Freshwater Lake	MIVPIPITDVQVNPSNSLFVTTGVNYDSDGKSVGSEITAQYTLNPGDSLEGQPSEVVAIANALWTP
Ga0194050_11189583	3300020155	Anoxic Zone Freshwater	MIVPVNIVAVQVNQNNSLFVTTGVDYDNSGTIVGSEITAQYTLNPGDSLEGQPVEVG
Ga0194128_101089141	3300020197	Freshwater Lake	MIDQTPTVQVQVNANNSLFVTTGIDYDKDGSIVGSEITEQYTLNPGDSLEGQPPEVVKIANALWTPAVVEAYKAS
Ga0208232_10154531	3300020527	Freshwater	MIVPVNIVAVQCNQNNSLFVTTGIDYDNSGTIVGSEITSQYTLNPGDSLEGQPTEVVNIANALWT
Ga0207939_10258231	3300020536	Freshwater	MIVPVDIVAVQCNQNNSLFVTTGIDYDSDGAVVGSEIVSQYTLNPGDDLTGQPVEVV
Ga0208221_10291241	3300020574	Freshwater	MIVPVNIVAVQVNQNNSLFVTTGIDYDSDGAVVGSEITSQYTLNPGDDLTGQPTEVVNIANALWTPAV
Ga0194133_101556313	3300021091	Freshwater Lake	MIVPIPITDVQVNPSNSLFVTTGVNYDSDGKSVGSEITAQYTLNPGDSLEGQPSEVVKIADALWTPLPYRGLRVR
Ga0194130_100945796	3300021376	Freshwater Lake	NPSNSLFVTTGVNYDSDGKSVGSEITAQYTLNPGDSLEGQPSEVVKIADALWTPLPYRGLRVR
Ga0194130_105059772	3300021376	Freshwater Lake	MIVPIPITEVQVNPSNSLFVTTGVNYDSDGKSVGSEITAQYTLNPGDSLEGQPSEVVAIANALWTP
Ga0194117_104027482	3300021424	Freshwater Lake	MIVPIPITDVQVNPSNSLFVTTGVNYDSDGKSVGSEITAQYTLNPGDSLEGQPSEVVKIANALWTP
Ga0181354_10099732	3300022190	Freshwater Lake	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAIVGSEITAQYTLNPGDDLTGQPTEVVNIANAIWK
Ga0181351_12002432	3300022407	Freshwater Lake	MIIPIDIVTVQVNQDNSLFVTTGIDYDNSGTIVGSEITSQYTLKQGDSLEGQPTEVVNIADALWVVPVVN
Ga0244776_100880672	3300024348	Estuarine	MIIPINILTVQVNQDNSLFVTTGIDYDNSGTIVGSEITSQYTLKQGDSLEGQPTEVVNIADALWVVPVVN
Ga0256336_10403351	3300024562	Freshwater	MIDSTPVVAVQVNKDNSLFVTTGVDYDKSGTLVGSEITAQYTLVPDDDLTGQPQEVVNIANALW
Ga0208005_12445201	3300025848	Aqueous	MIDSTPVVAVQVNSDNSLLVTNGVDYNKDGVMVGGEITSQYTLVPGDSLDGQPTEVVKIANALWTPAVVEA
Ga0208975_10771162	3300027659	Freshwater Lentic	MIVPVDIVSVQVNQNNSLFVTTGTDYDNNGTIVGSEITSQYTLNPGDSLEGQPTEVVNIANAIWK
Ga0209553_11049811	3300027688	Freshwater Lake	MIIPIDIVTVQVNQDNSLFVTTGIDYDNSGTIVGSEITSQYTLKQGDSLEGQPTEVV
Ga0209442_13172061	3300027732	Freshwater Lake	MIVPVNIVAVQCNQNNSLFVTTGVDYDSDGAVVGSEITSQYTLNPGDDLTGQPVEV
Ga0209087_11311823	3300027734	Freshwater Lake	MIVPVNIVAVQVNRNNSLFVTTGIDYDSDDAVVGSEITSQYTLNPGDDLTGQPTEVVNIANA
Ga0209444_101249291	3300027756	Freshwater Lake	MIVPVNIVAVQVNQNNSLFVTTGVDYDSDGSIVGSEITSQYTLNPGDSLDGQPTEVVSI
Ga0209107_1000119514	3300027797	Freshwater And Sediment	MIVPVNIISVQCNQNNSLFVTTGIDYDSDGAVVGSEITSQYTLNPGDDLTGQPTEVVNIANAIWK
Ga0209107_101193684	3300027797	Freshwater And Sediment	MIVPVDIVAVQVNQNNSLFVTTGIDYDNSGTIVGSEITSQYTLNPGDSLEGQPTEV
Ga0209353_101453473	3300027798	Freshwater Lake	MIVPVDIVAVQVNQNNSLFVTTGTDYDSDGAVVGSEITSQYTLNPGDSLEGQP
Ga0209353_104409402	3300027798	Freshwater Lake	DIISVQVNQNNSLFVTTGVDYDNSGTIVGSEITSQYTLNPGDDLTGQPTEVVNIANAIWK
(restricted) Ga0247832_12254141	3300028557	Freshwater	MIVPVDIVAVQVISNNSLFVTTGVDYDNDGAIVGSEIAAQYTLNPGDSLEGQPTEVVNIA
Ga0315293_107345913	3300031746	Sediment	MIVPINIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYTLKPGDSIEGQPTEVVNIANALWTKE
Ga0315907_102887494	3300031758	Freshwater	MIVPVDIVAVQVNANNSLFVTTGVDYDNSGAVVGSEITSQYTLNPGDSLDGQPTEVVNIANALWTPAPINVPVRPTP
Ga0315907_103693293	3300031758	Freshwater	MIVPINIVAVQVNANNSLFVTTGVDYDNDGTVVGQEITSQYTLNPGDSLDGQPTEVVNIANALWPPAPINVPVRPTP
Ga0315290_111846751	3300031834	Sediment	SKPPTRYPMIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASELTAQYTLKQGDSLVGQPTEVVNIANALWPKR
Ga0315285_101038582	3300031885	Sediment	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASEITAQYTLKPGDSLVGQPTEVVNIANALWTKE
Ga0315285_109383062	3300031885	Sediment	MIVPVDIVAVQVNQNNSLFVTTGVDYDSDGAVVGSEITSQYTLNPGDDLTGQPTEVVNIA
Ga0315904_103851482	3300031951	Freshwater	MIVPVDIVAVQVNANNSLFVTTGVDYDNSGSIVGQEITSQYTLNPGDSLDGQPTEVVNIANALWTPAPINVPVRPTP
Ga0315904_106810881	3300031951	Freshwater	MIVPVDIVAVQVNANNSLFVTTGVDYDNSGAVVGSEITSQYTLNPGDSLDGQPTEVVNIANALWTPAPINV
Ga0315294_101943343	3300031952	Sediment	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASELTAQYTLKQGDSLVGQPTEVVNIANALWPKR
Ga0315901_111180542	3300031963	Freshwater	MIVPVDIVAVQVNANNSLFVTTGVDYDNSGAVVGSEITSQYTLNPGDSLDGQPTEVVNIANALWTPAPIN
Ga0315274_107099093	3300031999	Sediment	MIVPVNIVAVQVNQNNSLFVTTGVDYDNDGAVVGSEITAQYTLNPGDSLEGQPTEVVNIANALWTPAV
Ga0315283_122773182	3300032164	Sediment	MIVPVNIVAVQVNQNNSLFVTTGIDYDNSGTIVGSEITSQYTLVPGDSLEGQPVEVVNIANAL
Ga0315268_101376731	3300032173	Sediment	MIVPVNIVTVQVNADNSLFVTTGADYDNDGVIAASELTAQYTLKQGDSLVGQPTEVVNIANALWPKR
Ga0315268_104072733	3300032173	Sediment	MIIPINIVTVQVNQDNSLFVTTGTDYDNSGTIVGSEITSQYTLKQGDSLEGQPTEVVNIADALWVVPVVNQQSE
Ga0315268_118711333	3300032173	Sediment	PMIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASELTAQYTLKQGDSLVGQPTEVVNIANALWPKR
Ga0315271_101512792	3300032256	Sediment	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVITASELTAQYTLKQGDSLVGQPTEVVNIANALWPKR
Ga0315275_116843631	3300032401	Sediment	MIVPVDIVAVQVNQNNSLFVTTGIDYDNSGTIVGSEITSQYTLVPGDSLDGQPTEV
Ga0334722_101527914	3300033233	Sediment	MIVPVDIVSVQVNQNNSLFVTTGVDYDSDGAVVGSEITAQYTLVPGDSLEGQPTE
Ga0334722_102081663	3300033233	Sediment	MIVPVNIVTVQVNADNSLFVTTGVDYDNDGVIAASELTAQYTLKQGDSLVGQPTEVVNIANA
Ga0334722_106493652	3300033233	Sediment	MIVPINIVTVQVNADNSLFVTTGADYDNDGVIAASELTAQYTLKQGDSLVGQPTEVVNIANALWPKR
Ga0334986_0119663_1_186	3300034012	Freshwater	MIVPVDIVAVQVNQNNSLFVTTGVDYDSDGAVVGSEITSQYTLNPGDDLTGQPVEVVNIANA
Ga0334991_0002365_3_167	3300034013	Freshwater	MIVPVNIVAVQCNQNNSLFVTTGIDYDNSGSIVGSEITSQYTLVPGDDLTGQPVE
Ga0334987_0159521_1434_1637	3300034061	Freshwater	MIVPVDIISVQVNANNSLFVTTGIDYDSDGAIVGSEITSQYTLNPGDSLEGQPTEVVSIANALWTPAV
Ga0335001_0044003_1_165	3300034064	Freshwater	MIVPVNIVAVQCNQNNSLFVTTGVDYDSDGAVVGSEITSQYTLNPGDDLTGQPTE
Ga0335019_0830978_3_194	3300034066	Freshwater	MIVPVDIVAVQVNQNNSLFVTTGIDYDSDGAVVGSEITSQYTLVPGDDLTGQPTEVVNIANALW
Ga0310130_0303020_319_507	3300034073	Fracking Water	MIDPIPVVAIQVNQDNSLFVTTGVDYDKSGTIVGTEITSQYTLVPGDDLTGQPQEVVNLANAL
Ga0335022_0043712_3_203	3300034095	Freshwater	MIVPVNIVAVQVNQNNSLFVTTGVDYDSDGAVVGSEITSQYTLVPGDSLEGQPTEVVNIANALWTPA
Ga0335007_0241584_3_191	3300034283	Freshwater	MIVPVNIVAVQCNQNNSLFVTTGVDYDNSGSIVGSEITSQYTLNPGDDITGQPTEVVNIANAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters