Metagenome / Metatranscriptome Family F082212

Basic Information
Family ID	F082212
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	62 residues
Representative Sequence	MSNLQRIEQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSARQWTLTVLESNLEVGR
Number of Associated Samples	85
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.97 %
% of genes near scaffold ends (potentially truncated)	19.47 %
% of genes from short scaffolds (< 2000 bps)	79.65 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Unclassified (61.062 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza (9.735 % of family members)
Environment Ontology (ENVO)	Unclassified (32.743 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.478 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01882	DUF58	10.62
PF02463	SMC_N	6.19
PF07726	AAA_3	0.88
PF00809	Pterin_bind	0.88
PF02881	SRP54_N	0.88
PF00563	EAL	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	10.62
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.88
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.88
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.88
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
All Organisms	root	All Organisms	38.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
cellular organisms	root	All Organisms → cellular organisms	38.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	34.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	34.51 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	14.16 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	5.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	14.16 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	5.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	14.16 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	5.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	14.16 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	4.42 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.06 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	14.16 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	4.42 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105313589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	929	Open in IMG/M
3300004081\|Ga0063454_101877443	Not Available	526	Open in IMG/M
3300005093\|Ga0062594_100578252	Not Available	977	Open in IMG/M
3300005330\|Ga0070690_100016174	All Organisms → cellular organisms → Bacteria → Proteobacteria	4463	Open in IMG/M
3300005330\|Ga0070690_101213242	Not Available	602	Open in IMG/M
3300005332\|Ga0066388_100528873	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1812	Open in IMG/M
3300005332\|Ga0066388_108478823	Not Available	512	Open in IMG/M
3300005334\|Ga0068869_101263845	Not Available	650	Open in IMG/M
3300005338\|Ga0068868_101621820	Not Available	608	Open in IMG/M
3300005340\|Ga0070689_100047079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	3324	Open in IMG/M
3300005343\|Ga0070687_100032720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2561	Open in IMG/M
3300005365\|Ga0070688_100207797	Not Available	1373	Open in IMG/M
3300005441\|Ga0070700_100599606	Not Available	863	Open in IMG/M
3300005459\|Ga0068867_100552989	Not Available	997	Open in IMG/M
3300005466\|Ga0070685_10061038	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2206	Open in IMG/M
3300005466\|Ga0070685_10674712	Not Available	751	Open in IMG/M
3300005529\|Ga0070741_11287110	Not Available	612	Open in IMG/M
3300005536\|Ga0070697_101056880	Not Available	722	Open in IMG/M
3300005539\|Ga0068853_100899076	Not Available	850	Open in IMG/M
3300005615\|Ga0070702_101732878	Not Available	520	Open in IMG/M
3300005840\|Ga0068870_10208709	Not Available	1188	Open in IMG/M
3300005844\|Ga0068862_101548750	Not Available	669	Open in IMG/M
3300006028\|Ga0070717_10029335	All Organisms → cellular organisms → Bacteria	4412	Open in IMG/M
3300006028\|Ga0070717_10282715	Not Available	1472	Open in IMG/M
3300007076\|Ga0075435_101712093	Not Available	552	Open in IMG/M
3300009545\|Ga0105237_11680350	Not Available	642	Open in IMG/M
3300009553\|Ga0105249_10102805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2690	Open in IMG/M
3300010046\|Ga0126384_11851062	Not Available	574	Open in IMG/M
3300010047\|Ga0126382_10468156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1004	Open in IMG/M
3300010359\|Ga0126376_10870793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	887	Open in IMG/M
3300010359\|Ga0126376_12823163	Not Available	535	Open in IMG/M
3300010362\|Ga0126377_12252826	Not Available	621	Open in IMG/M
3300010362\|Ga0126377_12984504	Not Available	546	Open in IMG/M
3300010362\|Ga0126377_13415734	Not Available	513	Open in IMG/M
3300010398\|Ga0126383_13187395	Not Available	536	Open in IMG/M
3300010398\|Ga0126383_13217502	Not Available	533	Open in IMG/M
3300010399\|Ga0134127_10482425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1247	Open in IMG/M
3300010400\|Ga0134122_10140757	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1952	Open in IMG/M
3300010401\|Ga0134121_10060673	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3116	Open in IMG/M
3300010865\|Ga0126346_1018486	Not Available	504	Open in IMG/M
3300010869\|Ga0126359_1358189	Not Available	523	Open in IMG/M
3300011428\|Ga0137456_1010277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1805	Open in IMG/M
3300011431\|Ga0137438_1003185	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4491	Open in IMG/M
3300011438\|Ga0137451_1042012	Not Available	1335	Open in IMG/M
3300011442\|Ga0137437_1038184	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1645	Open in IMG/M
3300011442\|Ga0137437_1045672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1498	Open in IMG/M
3300012212\|Ga0150985_104907360	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300012212\|Ga0150985_112455199	Not Available	536	Open in IMG/M
3300012212\|Ga0150985_114452186	Not Available	688	Open in IMG/M
3300012228\|Ga0137459_1001094	All Organisms → cellular organisms → Bacteria	8822	Open in IMG/M
3300012228\|Ga0137459_1020722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1838	Open in IMG/M
3300012469\|Ga0150984_112343139	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	949	Open in IMG/M
3300012685\|Ga0137397_10536348	Not Available	871	Open in IMG/M
3300012929\|Ga0137404_11026744	Not Available	755	Open in IMG/M
3300012930\|Ga0137407_11444684	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300012948\|Ga0126375_11350538	Not Available	602	Open in IMG/M
3300012948\|Ga0126375_11370337	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	598	Open in IMG/M
3300014325\|Ga0163163_12200185	Not Available	611	Open in IMG/M
3300017966\|Ga0187776_10416850	Not Available	902	Open in IMG/M
3300018083\|Ga0184628_10550903	Not Available	590	Open in IMG/M
3300019874\|Ga0193744_1004442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2552	Open in IMG/M
3300019874\|Ga0193744_1090632	Not Available	573	Open in IMG/M
3300019880\|Ga0193712_1031166	Not Available	1147	Open in IMG/M
3300021082\|Ga0210380_10481405	Not Available	569	Open in IMG/M
3300021315\|Ga0179958_1178006	Not Available	712	Open in IMG/M
3300024288\|Ga0179589_10213735	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	847	Open in IMG/M
3300024288\|Ga0179589_10277949	Not Available	749	Open in IMG/M
3300024330\|Ga0137417_1460812	Not Available	1899	Open in IMG/M
3300025908\|Ga0207643_10520434	Not Available	762	Open in IMG/M
3300025918\|Ga0207662_10316895	Not Available	1040	Open in IMG/M
3300025927\|Ga0207687_10926722	Not Available	746	Open in IMG/M
3300025930\|Ga0207701_10986776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	702	Open in IMG/M
3300025936\|Ga0207670_10081761	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2262	Open in IMG/M
3300025942\|Ga0207689_11099179	Not Available	670	Open in IMG/M
3300025972\|Ga0207668_10482776	Not Available	1063	Open in IMG/M
3300026088\|Ga0207641_12363347	Not Available	531	Open in IMG/M
3300026095\|Ga0207676_10979604	Not Available	832	Open in IMG/M
3300027480\|Ga0208993_1044778	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	795	Open in IMG/M
3300028379\|Ga0268266_10799438	Not Available	911	Open in IMG/M
3300028380\|Ga0268265_11052759	Not Available	806	Open in IMG/M
3300028794\|Ga0307515_10000701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	77463	Open in IMG/M
3300028794\|Ga0307515_10937806	Not Available	500	Open in IMG/M
3300029923\|Ga0311347_10695212	Not Available	618	Open in IMG/M
3300030990\|Ga0308178_1080534	Not Available	662	Open in IMG/M
3300031058\|Ga0308189_10530574	Not Available	511	Open in IMG/M
3300031184\|Ga0307499_10214879	Not Available	598	Open in IMG/M
3300031231\|Ga0170824_125612164	Not Available	700	Open in IMG/M
3300031231\|Ga0170824_127178952	Not Available	603	Open in IMG/M
3300031231\|Ga0170824_127407301	Not Available	539	Open in IMG/M
3300031232\|Ga0302323_100263766	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1771	Open in IMG/M
3300031238\|Ga0265332_10031169	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2326	Open in IMG/M
3300031456\|Ga0307513_10047625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4661	Open in IMG/M
3300031507\|Ga0307509_10023022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	7005	Open in IMG/M
3300031507\|Ga0307509_10125338	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	2536	Open in IMG/M
3300031507\|Ga0307509_10320178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1288	Open in IMG/M
3300031507\|Ga0307509_10686747	Not Available	691	Open in IMG/M
3300031616\|Ga0307508_10010947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8296	Open in IMG/M
3300031616\|Ga0307508_10370624	Not Available	1023	Open in IMG/M
3300031616\|Ga0307508_10498937	Not Available	812	Open in IMG/M
3300031616\|Ga0307508_10631364	Not Available	675	Open in IMG/M
3300031715\|Ga0307476_10010319	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5818	Open in IMG/M
3300031720\|Ga0307469_10145778	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1763	Open in IMG/M
3300031720\|Ga0307469_11517372	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300031726\|Ga0302321_100969596	Not Available	967	Open in IMG/M
3300031938\|Ga0308175_100001231	All Organisms → cellular organisms → Bacteria	17273	Open in IMG/M
3300032180\|Ga0307471_100173688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2114	Open in IMG/M
3300032180\|Ga0307471_100865515	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1071	Open in IMG/M
3300033433\|Ga0326726_10959334	Not Available	830	Open in IMG/M
3300033486\|Ga0316624_11136871	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300034268\|Ga0372943_0002941	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	8495	Open in IMG/M
3300034653\|Ga0316599_197670	Not Available	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.14%
Host-Associated	Host-Associated	31.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.18%
Plants	Host-Associated → Plants	31.86%
Aquatic	Environmental → Aquatic	7.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.27%
Roots	Host-Associated → Plants → Roots	10.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.96%
Sediment	Environmental → Aquatic → Sediment	7.08%
Peat	Environmental → Terrestrial → Peat	3.54%
Freshwater	Environmental → Aquatic → Freshwater	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.05%
Loam	Environmental → Terrestrial → Soil → Loam	15.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified	9.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	9.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.73%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	9.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	7.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	6.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.54%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.65%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.77%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.77%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019880	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031507	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM	Host-Associated	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034653	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1053135892	3300000364	Soil	MRHLQQIEQRHRPDRWRDIIFVAAAVLLTALAIGSVTSKAIGSRPEHAWTLTVLEGNLEVNP*
Ga0063454_1018774432	3300004081	Soil	MSHLTRIEERHRPDRWRDMIFVMGALLLTALSVGSLTTKAAGPAWTVTVIESGLEIGAH*
Ga0062594_1005782522	3300005093	Soil	MSNLQLIEQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSVRQWTLTVLESNLEVNR*
Ga0070690_1000161745	3300005330	Switchgrass Rhizosphere	MSNLQRIEQRHRRDRWRDIAFVAAALLLMALSIGAFTTKAAGSVPEHKWTLTVLESEVEVGP*
Ga0070690_1012132421	3300005330	Switchgrass Rhizosphere	MSHLTQIEERHRPDRWRDMIFIVGALLLTALSIGSLTTKAAGPAWTVTVIESGLEI
Ga0066388_1005288732	3300005332	Tropical Forest Soil	MSNLQRIEQRHRPDRWRDIIFVLSAALLAALSIGSLTSKAAGSVSEHKWTLTVLESNVEVAR*
Ga0066388_1084788231	3300005332	Tropical Forest Soil	MSHLTQIEERHRPDRWRDTIFIVGALLLTALSIGSLTTKAAGPAWSVTVIESGLEIGAN*
Ga0068869_1012638451	3300005334	Miscanthus Rhizosphere	MSNLDQIEERHRPDRRRDLIFLAGAALLTALSIGSLTSKAAGSVSQRQWTLTVLESTIEVSP*
Ga0068868_1016218202	3300005338	Miscanthus Rhizosphere	MSHLTQIEERHRPDRWRDMIFIVGALLLTALSIGSLTTKAAGPAWTVTVIESGLEIAN*
Ga0070689_1000470793	3300005340	Switchgrass Rhizosphere	MSNLQRIEQRHRRDRWRDIAFVATAILLTALLIGAFTTKAAGSVAEHKWTLTVLESEVEVGP*
Ga0070687_1000327203	3300005343	Switchgrass Rhizosphere	MSNLERIEQRHRPDRWRDIIFVLGAALLAALSIGSLTSKAAGSVSARQWTLTVLESNIEVSR*
Ga0070688_1002077972	3300005365	Switchgrass Rhizosphere	MSNLERIEQRHRPDRWRDIIFVLGAALLAALSIGSLTSKAAGSVSARQWTLTVLESNVEVSR*
Ga0070700_1005996062	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	IEQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSARQWTLTVLESNLEVGR*
Ga0068867_1005529891	3300005459	Miscanthus Rhizosphere	MDHLHQDHLQEIAARHRPDRWTDLVFIIGAVLLTALSIGSLTSKAAGSVSPHEWTVTVLESPLELLAR*
Ga0070685_100610382	3300005466	Switchgrass Rhizosphere	MSNLHLIAQRHRPDRWSDMIFLAGAVLLTALSLGTLTSRAVGSVSERHWTVTVLESNLEVSR*
Ga0070685_106747122	3300005466	Switchgrass Rhizosphere	MSNLERIEQRHRPDRWRDIIFVLGAALLAALSIGSLTSKAAGSVSTRQWTLTVLESNVEVSR*
Ga0070741_112871101	3300005529	Surface Soil	MGNLQQIALRHRPDRWRDIIFVAGTALLAALSLGAVTRQAAGTVHERQWELTVVVGALEVMR*
Ga0070697_1010568802	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSHLNEIAERHRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGTAPEHQWTLTVLESGFEVGN*
Ga0068853_1008990762	3300005539	Corn Rhizosphere	MDHLHQDHLQEIAARHRPDRWTDLVFIIGAVLLTALSIGSLTSKAAGSVSPHEWTVTVL
Ga0070702_1017328781	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	HRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGTAPEHQWTLTVLESGFEVGN*
Ga0068870_102087091	3300005840	Miscanthus Rhizosphere	MSNLQRIEQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSARQWTLTVLESNLEVGR*
Ga0068862_1015487501	3300005844	Switchgrass Rhizosphere	VMSNLQRIEQRHRRDRWRDIAFVATAILLTALAIGAFTTKAAGSVAEHKWTLTVLESEVEVGP*
Ga0070717_100293352	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLHLIAQRHRPDRWSDMIFLAGAVLLTALSVGTLTSRAVGSVSERHWTVTVLESNFEVSR*
Ga0070717_102827154	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGNLQQNLQQIAQRHRPDRRRDMIFVAAALLLTALSIGSLTSKGVGSVSAHEWTLTVLEGKLEVNR*
Ga0075435_1017120932	3300007076	Populus Rhizosphere	MSNLQLIEQRHRPDRFRDIIFVLGAALLAALSIGSLTTKAAGSVSARQWTLTVLESNLE
Ga0105237_116803501	3300009545	Corn Rhizosphere	MSHLTQIAERHRPDRRRDIIFVVGALLLTALSIGSLTTQAAGRVADRPWTVTVIESGLEIGQN*
Ga0105249_101028051	3300009553	Switchgrass Rhizosphere	MSNLQRIEQRHRRDRWRDIAFVATAILLMALSIGAFTTKAAGSVPEHKWTLTVLESEVEVGP*
Ga0126384_118510621	3300010046	Tropical Forest Soil	MSNLQRIEQRHRPDRWRDIIFVLGAALLAALSIGSLTSKAAGSVSARQWTLTVLESNIEVNR*
Ga0126382_104681562	3300010047	Tropical Forest Soil	MSHLNEIAERHRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGAAPEHQWTLTVLESGFEVGN*
Ga0126376_108707932	3300010359	Tropical Forest Soil	MSHLTRIAERHRPDRWRDTIFVVGALLLTALSIGSLTSKAAGPVAQRVWSVTVIESGLEIGPN*
Ga0126376_128231632	3300010359	Tropical Forest Soil	SQARREPMSHLTQIAERHRPDRWRDMIFIAGALLLMALSIGSLTSKAAGPVWGVTVIESGLEIGVN*
Ga0126377_122528262	3300010362	Tropical Forest Soil	MSNLQQIEQRHRPDRWRDAIFVLGAALLASLCIGSLTSKAAGSVSAHRWTLTVLESNLEVNR*
Ga0126377_129845041	3300010362	Tropical Forest Soil	MSNLQLIEQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSARQWTLTVLESNLEVNR*
Ga0126377_134157341	3300010362	Tropical Forest Soil	MSHLTEIAERHRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGTAPEHQWTLTVLESGFEVGN*
Ga0126383_131873951	3300010398	Tropical Forest Soil	MSYLAQIEERHRPDRWRDMIFIVGALLLTALSIGSLTTKAAGPVWTVTVIESGLEIGAN*
Ga0126383_132175021	3300010398	Tropical Forest Soil	MSHLTEIAERHRPDRWTDIIFIVGAVLLTALSIGSLTTKAAGTAPEHQWTVTVFESGFEVGN*
Ga0134127_104824252	3300010399	Terrestrial Soil	EQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSVRQWTLTVLESNLEVNR*
Ga0134122_101407572	3300010400	Terrestrial Soil	MNHLTEIEDRHRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGAAPEHQWTLTVLESGFEVGN*
Ga0134121_100606734	3300010401	Terrestrial Soil	MSNLQQIEQRHRPDRWRDILFVAAALLLTALSIGSLTSKAVGSVAEHTWTLTVLESNVAVDSDLVVSR*
Ga0126346_10184861	3300010865	Boreal Forest Soil	RKEETMSNLQQNLRRNLERIEQRHRPDVWRDIIFIMGATLLTALSVGSLTSKAAGSVPERQWTLTVLESTVEVSP*
Ga0126359_13581891	3300010869	Boreal Forest Soil	MSNLQRIEQRHRPDRRRDLIFIAGAALLAALYVGSLTSSAVGSVSERKWTLTVLESALEVSR*
Ga0137456_10102772	3300011428	Soil	MSNLQQIEKRHRPDRWRDILFVAAALLLTALSIGSLTSKAVGSVAEHTWTLTVLEGNVAVDSDLVVSR*
Ga0137438_10031856	3300011431	Soil	MSNLQRIEQRHRPDVWRDVIFIAGATLLAALSVGSLTSKAAGSVPERQWTLTVLESNVEVSR*
Ga0137451_10420124	3300011438	Soil	MSNLQRIEHRHRPDRWRDLIFVAAAILLTALSIGSLTSKAAGSVSEHQWTLTVLESAVEVSR*
Ga0137437_10381842	3300011442	Soil	MGNLQQIEQRHRPDRRRDIIFVAAAILLTALSIGALTSKAVGSVSTHEWTLTVLEGNLEVSR*
Ga0137437_10456722	3300011442	Soil	MSHLTEIEERHRPDRWRDIIFIVGAVLLTALSIGSLTSQAAGAIPEHQWTLQVFDSGLEVMR*
Ga0150985_1049073602	3300012212	Avena Fatua Rhizosphere	MSHLSEIEERHRPDRTRDIIFIVGAVLLTALSIGSLTSGAAGSAPEHLWTLQVVESGVEVVP*
Ga0150985_1112036262	3300012212	Avena Fatua Rhizosphere	MERPSLAQIELRHRPDRWRDIIFIGAAVLLTALSIGSVTSKAAGSVTQHAWTLTMEEHPELLK*
Ga0150985_1124551991	3300012212	Avena Fatua Rhizosphere	MDPLHQDHLQEIAARHRPDRWTDLVFIIGAVLLTALSIGSLTSKAAGSVSPHEWTVTVLESPLELLAR*
Ga0150985_1144521861	3300012212	Avena Fatua Rhizosphere	MGSLNQIEERHRPDRWRDIGFIALAVLLTALSIGSLTSKAVGSVTQHAWTLTMEEHPELLGK*
Ga0137459_10010947	3300012228	Soil	MGNLQHIEQRHRPDRRRDIIFVAAAVLLTALSIGSLTSNAVGSVSAREWTLTVLEGKLEVSR*
Ga0137459_10207222	3300012228	Soil	MSNLQRIEQRHRPDRWRDLIFVAAAILLTALSIGSLTSKAVGSVSEHQWTLTVLESTVEVSR*
Ga0150984_1118868632	3300012469	Avena Fatua Rhizosphere	MERPSLAQIELRHRPDRWRDIIFIGAAVLLTALSIGSVTSKAAGSVTQHAWTLTMEEHPELLGK*
Ga0150984_1123431392	3300012469	Avena Fatua Rhizosphere	MSHLTQIEERHRPDRRRDMIFIVGALLLTALSIGSLTTKAAGPAWTVTVIESSLEIGAN*
Ga0137397_105363481	3300012685	Vadose Zone Soil	MSNLDEIKQRHKPDRWRDIIFIAGAVLLTALSIGSVTSKAVGSVADHEWKLTYLEGNVEVSR*
Ga0137404_110267441	3300012929	Vadose Zone Soil	MTADSWTELSIVVSLQVMSNLQRIEQRHRPDRWRDIAFAATAILLTTLSIGAFTSKAAGSVAEHTWTLTVLESNVEVGP*
Ga0137407_114446842	3300012930	Vadose Zone Soil	MSHLNQIAARHRPDRWTDIIFVVGAVLLTALSVVSLTSNAAAALAHPWTLTVLESNLEVG
Ga0126375_113505382	3300012948	Tropical Forest Soil	MSNLQLIEQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSARQWTLTVLES
Ga0126375_113703371	3300012948	Tropical Forest Soil	MSHLNEIAERHRPDRWTDIIFIVGAVLLTALSIGSITSKAAGSVSDRPWTLTVV
Ga0163163_122001851	3300014325	Switchgrass Rhizosphere	MNVMSNLQRIEQRHRRDRWRDIAFVATAILLMALSIGAFTTKAAGSVAEHKWTLTVLESEVELGP*
Ga0187776_104168501	3300017966	Tropical Peatland	MSYLQRIEQRHRPDRWRDIIFVAAAVLLIALAIGSVTSKVVGPVTEHEWTLTVLEGNLEVNH
Ga0184628_105509031	3300018083	Groundwater Sediment	MSYLHRIEQRHRPDRRRDMIFVAGAVLLAALSIGSLTSKAVGQVSHRQWTLTVLESNLEVSR
Ga0193744_10044423	3300019874	Soil	MSHLNEIELRHRPDRWRDIIFIVGAVLLTALSIGSLTTQAAGAIPEHQWTLQVFDSGLEVMR
Ga0193744_10906321	3300019874	Soil	MSNLQRIELRHRPDRWRDITFVIAAALLTALAIGSLTTQAAGSVSERTWTLKVFESNLEVGR
Ga0193712_10311661	3300019880	Soil	MSNLERIEQRHRPDGRRDIIFVLGAALLAALSIGSLTSKAAGPVSAHQWTLTVLESNVEVSR
Ga0210380_104814052	3300021082	Groundwater Sediment	MSNLQRIEQRHRPDRWRDLIFVAAAILLTALSIGSLTSKAVGSVSEHQWTLTVLESTVEVSR
Ga0179958_11780062	3300021315	Vadose Zone Soil	MSNLHLIAQRHRPDRWSDMIFLAGAVLLTALSLGTLTSRAVGSVSERQWTVTVLESNFEVSR
Ga0179589_102137352	3300024288	Vadose Zone Soil	MSHLTQIEERHRPDRWRDTIFIVGALLLTALSIGSLTTKAAGRAWTVTVIESGLEIGAD
Ga0179589_102779491	3300024288	Vadose Zone Soil	MTAHSWTELPTVVNLKVMSNLQRIEQRHRPDRWRDIAFAATAILLTALSIGAFTSKAAGSVSEHSWTLTVLESDVEVSP
Ga0137417_14608124	3300024330	Vadose Zone Soil	MSTLQDEIEQRHRPDKRRDIIFLIGAMLLVALSLGTVTSKAVGAVHAREWSVTVLEGALEVGR
Ga0207643_105204341	3300025908	Miscanthus Rhizosphere	MSNLQRIEQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSARQWTLTVLESNLEVGR
Ga0207662_103168951	3300025918	Switchgrass Rhizosphere	MSNLERIEQRHRPDRWRDIIFVLGAALLAALSIGSLTSKAAGSVSARQWTL
Ga0207687_109267222	3300025927	Miscanthus Rhizosphere	MDHLHQDHLQEIAARHRPDRWTDLVFIIGAVLLTALSIGSLTSKAAGSVSPHEWTVTVLESPLELLAR
Ga0207701_109867762	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MSHLTQIEERHRPDRWRDMIFIVGALLLTALSIGSLTTKAAGPAWTVTVIESGLEIGAN
Ga0207670_100817613	3300025936	Switchgrass Rhizosphere	MSNLQLIEQRHRPDRWRDIIFVLGAALLAALSIGSLTTKAAGSVSVRQWTLTVLESNLEVNR
Ga0207689_110991791	3300025942	Miscanthus Rhizosphere	MSNLDQIEERHRPDRRRDLIFLAGAALLTALSIGSLTSKAAGSVSQRQWTLTVLESTIEVSP
Ga0207668_104827762	3300025972	Switchgrass Rhizosphere	MSNLQRIEQRHRRDRWRDIAFVAAALLLMALSIGAFTTKAAGSVPEHKWTLTVLESEVEVGP
Ga0207641_123633471	3300026088	Switchgrass Rhizosphere	RHRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGTAPEHQWTLTVLESGFEVGN
Ga0207676_109796041	3300026095	Switchgrass Rhizosphere	MSHLNEIAERHRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGTAPEHQWTLTVLESGFEVGN
Ga0208993_10447782	3300027480	Forest Soil	MSHLTQIEERHRPDRWTDIIFIVGAVLLTALSIGSLTSQAAGSVSDHPWTLTVLESNLEVVR
Ga0268266_107994382	3300028379	Switchgrass Rhizosphere	MSNLHLIAQRHRPDRWSDMIFLAGAVLLTALSLGTLTSRAVGSVSERHWTVTVLESNLEVSR
Ga0268265_110527591	3300028380	Switchgrass Rhizosphere	MSNLQRIEQRHRRDRWRDIAFVATAILLTALAIGAFTTKAAGSVAEHKWTLTVLESEVEVGP
Ga0307515_1000070153	3300028794	Ectomycorrhiza	MSHLNQIAARHRPDLWKDIIFIVGAVLLTALSIGSLTSKAAGSVPERPWTLTVLESNLEVAR
Ga0307515_109378061	3300028794	Ectomycorrhiza	MSNLHLIAQRHRPDRRSDMIFLAGALLLTALSLGTLTSRAVGSVSARQWSVTVLESNLEVSR
Ga0311347_106952121	3300029923	Fen	MSTLQVIEQRHRPDRRRDLIFIAAAALLAALAIGSVTKQAAGSVTERPWTLTVLEGGLEIGP
Ga0308178_10805341	3300030990	Soil	MSHLTEIEERHRPDRWRDIIFIVGAVLLTALSIGSLTTQAAGAIPEHQWTLQVFDSGLEVMR
Ga0308189_105305741	3300031058	Soil	MSNLHLIAQRHRPDRWGDMIFLAGAVLLAALSVGSLTSRIVGSVSERQWTVTVLESNFEVSR
Ga0307499_102148792	3300031184	Soil	MSHLIQIEERHRPDRWRDTIFIVGALLLTALSIGSLTTKAAGPAWTVTVIESGLEIGAN
Ga0170824_1256121642	3300031231	Forest Soil	MSNLQLIAQRHRPDRWSDMIFLAGAVLLTALSLGTLTSRAVGSVTERQWTVTVLESNFEVSR
Ga0170824_1271789521	3300031231	Forest Soil	RRIPMSYLEQIEQRHRPDRWRDMTFLAGAVLLTALSIGSLTSKAVGSVAPHQWTLTVLEGNLEVSR
Ga0170824_1274073012	3300031231	Forest Soil	LQLIELRHRPDRWRDIIFLAGTALLAALSLGAVTRQAAGTVHERQWELTVVVGALEVMR
Ga0302323_1002637662	3300031232	Fen	PMSTLQVIEQRHRPDRRRDLIFIAAAALLAALAIGSVTKQAAGSVTERPWTLTVLEGGLEIGP
Ga0265332_100311695	3300031238	Rhizosphere	MSYLAQIEERHRPDHWRDMIFIVGALLLTALSVGSLTSQAAGRAAEHPWSVTVIESGLEIVPN
Ga0307513_100476254	3300031456	Ectomycorrhiza	MSNLHLIAQRHRPDRWSDMIFLAGAVLLTMLSLGTLTSQIVGSVTERQWTVTVFESNLEVSR
Ga0307509_100230223	3300031507	Ectomycorrhiza	MSHLNEIAERHRPDRWTDIIFIVGAVLLTALSIGSLTLTAAGSAAERPWTLTVLESGFEVGN
Ga0307509_101253382	3300031507	Ectomycorrhiza	MSNLHLIAQRHRPDRWSDMIFLAGAVLLTALSLGTITSRAVGSVTAHQWTVTVLESNLEVSR
Ga0307509_103201782	3300031507	Ectomycorrhiza	MSHLTEIEERHRPDRWRDIIFIVGAVLLTALSIGSLTSQAAGSVSEHQWTLQVVEGNVEVMR
Ga0307509_106867472	3300031507	Ectomycorrhiza	MSHLNEIAERHRPDRWRDIIFIVGAALLTALSIGSLTSKAAGSVTEHAWTLQVVESGIEVASD
Ga0307508_100109471	3300031616	Ectomycorrhiza	MSNLERIELRHRPDVWRDMIFIAAAVLLAALSIGSLTSKAVGSVSEHKWTVTVLESNLEISR
Ga0307508_103706242	3300031616	Ectomycorrhiza	MTYLHEIEERHRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGPVWTLTVLESGLEVAR
Ga0307508_104989371	3300031616	Ectomycorrhiza	MSNLQRIELRHRPDRWRDIIFVMAAALLATLSVGALTSKAAGRVAAHQWTLTVLESSVEVSR
Ga0307508_106313642	3300031616	Ectomycorrhiza	NLERIEQRHRPDVWRDIIFIMGATLLTALSLGSLTSKAAGSVPERQWTLTVLESTIEVSP
Ga0307476_100103194	3300031715	Hardwood Forest Soil	MSHLTRIEERHRPDRWRDMIFVVGALLLTALSIGSLTTKAAGPAWTVTVIESGLEIGAN
Ga0307469_101457782	3300031720	Hardwood Forest Soil	MSHLTEIAERHRPDRWTDIIFIVGAVLLTALSIGSLTSKAAGSAPEHQWTLTVLESGFEVGN
Ga0307469_115173721	3300031720	Hardwood Forest Soil	MSHLTQIEERHRPDRWRDTIFIVGALLLTALSIVSLTTKAASGPAWTVTVIESGLEIGAN
Ga0302321_1009695961	3300031726	Fen	MSNLQRIEQRHRPDAWRDIIFIAGATLLTALSVASFTSKADGNVHQRQWTVTVLESN
Ga0308175_10000123114	3300031938	Soil	VVTLKAMSNLQRIEQRHRPDLWRDIAFAATAILLTALSIGAFTSKAAGSVAEHPWTLTVLESDVEVGP
Ga0307471_1001736882	3300032180	Hardwood Forest Soil	MSHLTRIEERHRPDRWRDLIFIAGALLLTALSIGSLTTKAAGPAWTVTVIESGLEIGAN
Ga0307471_1008655151	3300032180	Hardwood Forest Soil	MSHLTQIEERHRPDRWRDTIFIVGALLLTALSIGSLTTKAASGPAWTVTVIESGLEIGAN
Ga0326726_109593341	3300033433	Peat Soil	MSHLIQIEERHRPDRWRDMIFVMGALLLTALSIGSLTTKAAGPAWTVTVIESGLEIGAN
Ga0316624_111368711	3300033486	Soil	MSHLNRIAARHRPDRWTDMCFVMAAVLLVALSIGSLTSKAAGPAPEHTWTITVFESNLEVGP
Ga0372943_0002941_5305_5481	3300034268	Soil	MSHLNQIAARHRPDRWTDIIFVGGAVLLTALSVGSVTTKAAGRVWTVTVLESNLEVVR
Ga0316599_197670_23_211	3300034653	Untreated Peat Soil	MSNLHLIAQRHRPDRWSDMIFLAGAVLLTALSLGTLTSRIVGSVSERQWTVTVLESGVEVSR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082212

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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