Metagenome / Metatranscriptome Family F082078

Basic Information
Family ID	F082078
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	55 residues
Representative Sequence	MTNKQVFRGALTALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRLVQTNFA
Number of Associated Samples	91
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.61 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	94.69 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (94.690 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.398 % of family members)
Environment Ontology (ENVO)	Unclassified (35.398 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.796 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 85.19% β-sheet: 0.00% Coil/Unstructured: 14.81%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF02163	Peptidase_M50	1.77
PF13531	SBP_bac_11	1.77
PF04993	TfoX_N	0.88
PF03404	Mo-co_dimer	0.88
PF13751	DDE_Tnp_1_6	0.88
PF05598	DUF772	0.88
PF00144	Beta-lactamase	0.88
PF07586	HXXSHH	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.88
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.88
COG3070	Transcriptional regulator of competence genes, TfoX/Sxy family	Transcription [K]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.69 %
Unclassified	root	N/A	5.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Aquabacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	5.31 %
Aquabacter spiritensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter → Aquabacter spiritensis	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101493090	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300004080\|Ga0062385_10102161	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300004139\|Ga0058897_10013364	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300004267\|Ga0066396_10054235	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300004631\|Ga0058899_10029906	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300004631\|Ga0058899_10066586	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300004631\|Ga0058899_11922979	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300004631\|Ga0058899_12291082	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005332\|Ga0066388_104885098	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005332\|Ga0066388_107949463	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005542\|Ga0070732_10198837	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300005610\|Ga0070763_10058848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter → Aquabacter spiritensis	1847	Open in IMG/M
3300005764\|Ga0066903_102285181	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005764\|Ga0066903_105812704	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005764\|Ga0066903_106988706	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300005764\|Ga0066903_107795955	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005993\|Ga0080027_10025180	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300009038\|Ga0099829_10148497	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300010047\|Ga0126382_11564874	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300010154\|Ga0127503_10320345	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300010159\|Ga0099796_10009488	Not Available	2637	Open in IMG/M
3300010162\|Ga0131853_11149478	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300010861\|Ga0126349_1040825	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300011120\|Ga0150983_11971569	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300012199\|Ga0137383_10169741	All Organisms → cellular organisms → Bacteria → Proteobacteria	1598	Open in IMG/M
3300012202\|Ga0137363_11359462	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012361\|Ga0137360_10914936	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300012582\|Ga0137358_11054891	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300012917\|Ga0137395_10846072	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300012927\|Ga0137416_11164506	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012929\|Ga0137404_10655937	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300012930\|Ga0137407_10541477	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300012971\|Ga0126369_12803172	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300015054\|Ga0137420_1080860	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300016294\|Ga0182041_10096900	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2155	Open in IMG/M
3300016294\|Ga0182041_10378766	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300016294\|Ga0182041_11616491	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300016341\|Ga0182035_11671298	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300016341\|Ga0182035_12018514	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300016387\|Ga0182040_11262217	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300016404\|Ga0182037_11693185	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300016404\|Ga0182037_11869493	Not Available	537	Open in IMG/M
3300016422\|Ga0182039_10275611	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300016422\|Ga0182039_10294383	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300016422\|Ga0182039_11307095	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300016422\|Ga0182039_11594108	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300016445\|Ga0182038_10376635	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300017970\|Ga0187783_11098270	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300017972\|Ga0187781_11024647	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300017974\|Ga0187777_10724731	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300017995\|Ga0187816_10479702	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300018058\|Ga0187766_10317322	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300018085\|Ga0187772_10711333	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300020580\|Ga0210403_10979891	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300020581\|Ga0210399_10800314	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300021171\|Ga0210405_11337322	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300021178\|Ga0210408_10789550	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300021307\|Ga0179585_1156151	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300021407\|Ga0210383_11644264	Not Available	527	Open in IMG/M
3300021407\|Ga0210383_11660813	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300021476\|Ga0187846_10252544	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300021559\|Ga0210409_10422990	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300021559\|Ga0210409_11233237	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300021559\|Ga0210409_11295895	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300022503\|Ga0242650_1011036	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300022504\|Ga0242642_1029595	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300022505\|Ga0242647_1018679	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300022509\|Ga0242649_1053629	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300022510\|Ga0242652_1025817	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300022525\|Ga0242656_1047746	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300022527\|Ga0242664_1133204	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300022531\|Ga0242660_1071801	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300022533\|Ga0242662_10124753	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300022715\|Ga0242678_1063872	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300022716\|Ga0242673_1051608	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300022718\|Ga0242675_1010748	Not Available	1125	Open in IMG/M
3300022724\|Ga0242665_10171809	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300022726\|Ga0242654_10324816	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300025916\|Ga0207663_11171362	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300026304\|Ga0209240_1150550	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300026340\|Ga0257162_1013648	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300026446\|Ga0257178_1013733	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300027512\|Ga0209179_1138695	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300027645\|Ga0209117_1101261	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300031226\|Ga0307497_10171239	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031679\|Ga0318561_10311215	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300031681\|Ga0318572_10682089	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031682\|Ga0318560_10088146	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300031713\|Ga0318496_10665362	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300031719\|Ga0306917_11402407	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031744\|Ga0306918_11148658	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031763\|Ga0318537_10394088	Not Available	511	Open in IMG/M
3300031771\|Ga0318546_10983154	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031879\|Ga0306919_10446705	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300031890\|Ga0306925_10181888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2265	Open in IMG/M
3300031910\|Ga0306923_11000177	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300031912\|Ga0306921_10092827	All Organisms → cellular organisms → Bacteria	3489	Open in IMG/M
3300031912\|Ga0306921_11800251	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031941\|Ga0310912_10627522	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300031941\|Ga0310912_10859664	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031942\|Ga0310916_10896957	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031942\|Ga0310916_11567121	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031954\|Ga0306926_12164499	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300031959\|Ga0318530_10396942	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300032001\|Ga0306922_11795622	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300032001\|Ga0306922_12095771	Not Available	548	Open in IMG/M
3300032051\|Ga0318532_10241195	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300032059\|Ga0318533_10147633	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300032094\|Ga0318540_10642355	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300032121\|Ga0316040_112389	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300032261\|Ga0306920_102707182	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300032261\|Ga0306920_103056385	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300033290\|Ga0318519_10947271	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.46%
Aquatic	Environmental → Aquatic	2.65%
Arthropoda	Host-Associated → Arthropoda	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.58%
Freshwater	Environmental → Aquatic → Freshwater	2.65%
Cave	Environmental → Terrestrial → Cave	0.89%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.22%
Loam	Environmental → Terrestrial → Soil → Loam	15.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.77%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.89%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.19%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.89%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032121	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1014930902	3300002245	Forest Soil	MTNKQAFRGGLAALAGIALCTVSFSFLAAQEANVKVYAGMKG
Ga0062385_101021613	3300004080	Bog Forest Soil	MTNKQVFRGALTALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRL
Ga0058897_100133642	3300004139	Forest Soil	MSNKQMFFGGLAGLAGILLCTVSSSYVAAQEANAAVYAAMKG
Ga0066396_100542352	3300004267	Tropical Forest Soil	MTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPKLRLVQTNF
Ga0058899_100299061	3300004631	Forest Soil	MTNELMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKLRIVQTNGAGDTVSIIDPATNKVVAEVK
Ga0058899_100665861	3300004631	Forest Soil	MTNKQMLHGALTAVAGLLLCTVSSSYVAAQEANAAVYASMKGNPKLRLVQTNFAGDAVSIIDPATNKVVAQIPGIEM
Ga0058899_119229792	3300004631	Forest Soil	LSLRRMTKMTNRQMFRGALTALTGVLLCTVSLSFLAAQEANV
Ga0058899_122910821	3300004631	Forest Soil	MTNKQMFLGGLAGLAGILLCTVSSSYLAAQEANATVYAAMKGNPKLRLVQTNFAGDAVSIIDPATNKVVGEIKG
Ga0066388_1048850982	3300005332	Tropical Forest Soil	MTNKQMLHGALAAVAGLLLCTVSSSYVAAQEANAAVYASMKGNPKLRLVQTNFAGDAVSIIDPATNKVVA
Ga0066388_1079494631	3300005332	Tropical Forest Soil	MTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPKLRLVQ
Ga0070732_101988373	3300005542	Surface Soil	MTDKLMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAA
Ga0070763_100588482	3300005610	Soil	MTNKQVFRGALTALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRLVQTNFA
Ga0066903_1022851811	3300005764	Tropical Forest Soil	MTNNQVFRGALTALAGILLCTVSSSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAISI
Ga0066903_1058127041	3300005764	Tropical Forest Soil	MTNKLMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKLRIVQTNGAGDTVSIIDPATNKVVAEVKG
Ga0066903_1069887062	3300005764	Tropical Forest Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAISI
Ga0066903_1077959551	3300005764	Tropical Forest Soil	MTNKQVFLGGLTGLAGILLCTVSSTYLAAQEANAAVYAAMKGNPKLRLVQTNFAGDVVSIIDPATNK
Ga0080027_100251802	3300005993	Prmafrost Soil	MTNKQVFRGALAALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRLVQTNFAGDFVSIIDPATNKVVG*
Ga0099829_101484971	3300009038	Vadose Zone Soil	MTNMTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAM
Ga0126382_115648741	3300010047	Tropical Forest Soil	MTNMTHKRMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPNLRLVQTNFAGDVVSII
Ga0127503_103203451	3300010154	Soil	MTNMTNKQVFRGALTALAGILLCTVSSSFLAAQESNTAVYAAMKGNPKLRLVQTNFAGD
Ga0099796_100094885	3300010159	Vadose Zone Soil	MTNMTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPKLRLVQTNFAGDVVSII
Ga0131853_111494782	3300010162	Termite Gut	MTNMPHKQIFLAGLTGLAGILLCAASSSFLAAQESNAAVYAEMKGNPKLRLVQTN
Ga0126349_10408252	3300010861	Boreal Forest Soil	MTNKQVFLGGLAALAGILLCTVSSSYVAAQEANAE
Ga0150983_119715691	3300011120	Forest Soil	MTNMTNKHIFLGGLAGLAGILLCTVSPSYLAAQEANAAVYAAMKGNPKLRLVQ
Ga0137383_101697413	3300012199	Vadose Zone Soil	MTNMTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPKLRLVQTNFAGDSVSIIDP
Ga0137363_113594622	3300012202	Vadose Zone Soil	MTNMTNKQVFRAALTALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRLVQT
Ga0137360_109149362	3300012361	Vadose Zone Soil	MTNMTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAV
Ga0137358_110548912	3300012582	Vadose Zone Soil	MTNMTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKG
Ga0137395_108460721	3300012917	Vadose Zone Soil	MTNMTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPKLRLVQTNFAGDVVSIIDPATNKVVGEIKG
Ga0137416_111645062	3300012927	Vadose Zone Soil	MTHKQMFLGGLAGLAGILLCAASSSFLAAQESNAAVYAA
Ga0137404_106559372	3300012929	Vadose Zone Soil	MTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYA
Ga0137407_105414772	3300012930	Vadose Zone Soil	MTNMTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPKLRLVQTNFAGDVVSIIDPA
Ga0126369_128031721	3300012971	Tropical Forest Soil	MTNMTNKQMLHGALTAVAGLLLCTVSSSYVAAQEANAAVYASMKGNPKLRLVQTNFAGDA
Ga0137420_10808601	3300015054	Vadose Zone Soil	MTNMTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPKLRLVQTNFAGDVVSIIDPRLHH
Ga0182041_100969001	3300016294	Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKGNPKLRL
Ga0182041_103787661	3300016294	Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAISIIDPATNKVVGEIPG
Ga0182041_116164911	3300016294	Soil	MTKQVFRGALTALAGILLCTVSSSFALAQEANAAVYAAMKGNPKLRLVQTNFAGDAISI
Ga0182035_116712981	3300016341	Soil	MTNKLMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKLRIVQ
Ga0182035_120185141	3300016341	Soil	MTNNQVFRGALTALAGILLCTVSSSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAI
Ga0182040_112622171	3300016387	Soil	MTHKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAVSIID
Ga0182037_116931852	3300016404	Soil	MTNKLMFRGALTALAGVLLGTASFSFLAAQEANVAVYAGMKGAA
Ga0182037_118694932	3300016404	Soil	MTNKQMLHGALTAVAGLLLCTVSSSYVAAQEANAAVYAAMKGNPKLRLVQTNFAGDAISIIDPA
Ga0182039_102756114	3300016422	Soil	MTNKQVFRGSLTALAGIILCAASVSLAAAQGSKLR
Ga0182039_102943831	3300016422	Soil	MTNKQVFRGALTALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRLVQTNF
Ga0182039_113070952	3300016422	Soil	MTNKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKG
Ga0182039_115941082	3300016422	Soil	MSNKQMFFGGLAGLAGILLCTVSSSYVAAQEANVAVYAAMKGNPKLRIVQTNFAGDV
Ga0182038_103766352	3300016445	Soil	MTNKPVFRGVLTALAGILLCTVSSSFLAAQEANVAVYAAMKGNPKLRVLQTNNAGDTISIIDPATNKVV
Ga0187783_110982701	3300017970	Tropical Peatland	MTNQQVFRGAVTALAGILLCTVSVSFLAAQEANTAV
Ga0187781_110246471	3300017972	Tropical Peatland	MTNKQVFRGALTALAGILLCTVSSSFAAAQESNAAGYAAMKGNPKLR
Ga0187777_107247311	3300017974	Tropical Peatland	MTHKQMFLGGLTGVAGILLCAASSSFLAAQESNAAV
Ga0187816_104797022	3300017995	Freshwater Sediment	MTNKQVFRGALTALAGILLCTVSSSFLAAQESNVAV
Ga0187766_103173221	3300018058	Tropical Peatland	MTNKQVFRGALTALAGMFLCTVSSSFLAAQESNAAVYAAMKGNPKLRLVQTNFAGDAVSIIDPATNK
Ga0187772_107113332	3300018085	Tropical Peatland	MTNKQVFRGALTALAGILLCTVSSSFVAAQESNAAVYAAMKGNPKLRLVQTNFAGDAVSIIDPATNKVVAEI
Ga0210403_109798911	3300020580	Soil	MTNKQVFRGALTAFAGILLCTVSVSFLAAQEANTAVYAAM
Ga0210399_108003142	3300020581	Soil	MTNKLMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKLRIVQTNGA
Ga0210405_113373222	3300021171	Soil	MTNKLMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKL
Ga0210408_107895502	3300021178	Soil	MTNKLMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKLRIVQTNGAGDTVSIIDPA
Ga0179585_11561511	3300021307	Vadose Zone Soil	MTNKQVFRAGLTGLAGILLCTVSVSFLAAQESNTAVYAD
Ga0210383_116442642	3300021407	Soil	MTNKQVFRGALTALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRLVQTNFAGDFVSIIDPATNKVVGEIPH
Ga0210383_116608131	3300021407	Soil	MTNKQMFLGGLTGLAGILLCTVSPSYLAAQEANAAVY
Ga0187846_102525441	3300021476	Biofilm	MTNKQVFRGALIALAGILLCTVSSSFLAAQEANVAVYAAMKGNPKL
Ga0210409_104229901	3300021559	Soil	MTNKQMLHGALTAVAGLLLCTVSSSYVAAQEANAAVYASMKGNPKLRLVQTNFAGDAVSIIDPA
Ga0210409_112332372	3300021559	Soil	MTNELMFRGALTALAGVLLGTASFSFLAAQEANVAVYAGMKGAAKLRIVQTNGAG
Ga0210409_112958951	3300021559	Soil	MTNKLMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKLRIVQTNGAG
Ga0242650_10110362	3300022503	Soil	MTNKLVFRGALTALAGILLCTVSSSFLAAQEANTAVYAAMKGN
Ga0242642_10295951	3300022504	Soil	MTNKQMLFAGLTGIAGILMCTVSPPYVAAQEANAAVYAAMKGNPKLRLV
Ga0242647_10186792	3300022505	Soil	MTNKQVFRGALTALAGILLCTVSSSFVAAQEANAAVYAA
Ga0242649_10536291	3300022509	Soil	MTNKLVFRGALTALAGILLCTVSPSILAAQEANAAVYAAMKGNPKLRLVQTNFAGDAISIIDPATNKVVAE
Ga0242652_10258171	3300022510	Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGDA
Ga0242656_10477461	3300022525	Soil	MTNKLMFRGALTASAGVLLGTVSFSFLAAQEANVAVYAGMKGAANLRIVQTNGAGDTVSIIDPATNK
Ga0242664_11332041	3300022527	Soil	MTNKQVFRGALTALAGILLCTVSSSFVAAQEANAAVYAAMKGNPKLRLVQTNFAG
Ga0242660_10718012	3300022531	Soil	MTNELMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKLRIVQTNGAGDTVSIIDPATNKVVAE
Ga0242662_101247532	3300022533	Soil	MTNKLMFRGALTALAGVLLGTVSFSFLAAQEANVAVYAGMK
Ga0242678_10638722	3300022715	Soil	MTNELMFRGALTALAGVLLGTASFSFLAAQEANVAVYAGMKGAAKL
Ga0242673_10516082	3300022716	Soil	MTNKLVFRGALTALAGILLCTVSSSFVAAQEANAAVYAAMKGNPKLRLVQ
Ga0242675_10107481	3300022718	Soil	LTALAGILLCTVSSSFLAAQESNTAVYAAMKGNPKLRLVQTNFAGDAVSIIDPATNKVV
Ga0242665_101718091	3300022724	Soil	MTNKLMFRGALTASAGVLLGTVSFSFLAAQEANVAVYAGMKGAANLRIVQ
Ga0242654_103248161	3300022726	Soil	MTNKLMFRGALAALAGVLLGTVSFSFLAAQEANVAVYAGMKGAAKLRIVQT
Ga0207663_111713622	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTNKQVFRAGLTGLAGILLCTVSVSFLAAQESNTAVYAAMKGAAKLRMVQTNF
Ga0209240_11505501	3300026304	Grasslands Soil	MTHKQMFLGGLTGLAGILLCAASSSFLAAQESNAAVYAAMKGNPKLRLVQTNFAGDVV
Ga0257162_10136482	3300026340	Soil	MTHKQMFLGGLTGLTGILLCTVSVSFLAAQESNTAVYAAMKGAAKLRMVQTNFAGDVVSIIDPAT
Ga0257178_10137331	3300026446	Soil	MTHKQMFLGGLTGLTGILLCTVSVSFLAAQESNTAVYAAMK
Ga0209179_11386952	3300027512	Vadose Zone Soil	MTHKQMFLGGLTGLTGILLCTVSVSFLAAQESNTAVYAAMKGAAKLRMVQTNFAGD
Ga0209117_11012611	3300027645	Forest Soil	MTNKQVFRGALTALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRLVQ
Ga0307497_101712392	3300031226	Soil	MTNKQVFRGALQALAGILLCTVSSSFLAAQEANTAVYAAMKGNPKLRLVQTNFAGDFVSI
Ga0318561_103112152	3300031679	Soil	MTNKLMFRGALTALAGVLLGTASFSFLAAQEANVAVYSGMKGAAKLRIVQTNSAGDVVSIIDPATN
Ga0318572_106820892	3300031681	Soil	MTNKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKGNPKLRLVQTNFAGDVVSIIDPAANKVVAEIPGIEMAHGINVAK
Ga0318560_100881461	3300031682	Soil	MTNKQVIRAGLSGLAGILLCTVSVSFLAAQESNTAVYAAMKGAAKLRMVQTN
Ga0318496_106653622	3300031713	Soil	MTNKQVIRAGLSGLAGILLCTVSVSFPAAQESNTAVYAAMKGAAKLRMVQTNFAGDAISI
Ga0306917_114024071	3300031719	Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKG
Ga0306918_111486582	3300031744	Soil	MTNKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAVSIIDPATNKVV
Ga0318537_103940881	3300031763	Soil	MTNKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKGN
Ga0318546_109831542	3300031771	Soil	MTNKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKGNPKLRLVQTNFAGDVVSIIDPAANKVVAEIPGIEMAHGIN
Ga0306919_104467052	3300031879	Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGD
Ga0306925_101818884	3300031890	Soil	MTNKLMFRGALTALAGVLLGTASFSFLAAQEANVAV
Ga0306923_110001771	3300031910	Soil	MTNKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKGNPKLRLVQTNFAGDVVSIIDPATN
Ga0306921_100928271	3300031912	Soil	MTNNQVFRGALTALAGILLCTVSSSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAISIIDPA
Ga0306921_118002511	3300031912	Soil	MTNKQVIRAGLSGLAGILLCTVSVSFLAAQESNTAVYAAMKGAAKLRMVQTNFAG
Ga0310912_106275221	3300031941	Soil	MTNKQVIRAGLSGLAGILLCTVSVSFPAAQESNTAVYAAMKGAAKLRMVQTNF
Ga0310912_108596641	3300031941	Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKGNPKLRLVQTN
Ga0310916_108969571	3300031942	Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAISIIDPAT
Ga0310916_115671211	3300031942	Soil	MTNKQVFRGALTALAGILLCTVSSSFVAAQEANAAVYAAMKGNPKLRLVQTNF
Ga0306926_121644992	3300031954	Soil	MTNKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAVSIIDPATNKVVGEIPGI
Ga0318530_103969421	3300031959	Soil	MTNKQVIRAGLSGLAGILLCTVSVSFPAAQESNTAVYA
Ga0306922_117956221	3300032001	Soil	MTKQVFRGALTALAGILLCTVSSSFALAQEANAAVYAAMKGNPKLRLVQ
Ga0306922_120957711	3300032001	Soil	MTNKLMFRGALTALAGVLLGTASFSFLAAQEANVAVYAGMKGAAKLRIVQTNGAGDTVSIIDPATNKVVAEVK
Ga0318532_102411951	3300032051	Soil	MTNKQVFLGGLTGLAGILLCTVSSSFVAAQEANAAVYAAMKGNPKLRLVQTNFAGD
Ga0318533_101476333	3300032059	Soil	MTNKQVIRAGLSGLAGILLCTVSVSFPAAQESNTAVYAAMKGAAGN
Ga0318540_106423552	3300032094	Soil	MTNNQVFRGALTALAGILLCTVSPSLLAAQEANAAVYAAMKGNPKLRLVQTNFAGDAVSI
Ga0316040_1123891	3300032121	Soil	MTNKQVFRGGLTGLAGILLCTVSSSFLAAQESNTAVYAAMKGNPKLR
Ga0306920_1027071821	3300032261	Soil	MTHKQVFLGGLTGLAGILLCTVSSSYLAAQEANAAVYAAMKGNPKLRLVQTNFAGDVVSIIDPATNK
Ga0306920_1030563851	3300032261	Soil	MTKQVFRGALTALAGILLCTVSSSFVAAQEANAAV
Ga0318519_109472711	3300033290	Soil	MTKQVFRGALTALAGILLCTVSSSFALAQEANAAVYAAMKGNPK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082078

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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