Metagenome / Metatranscriptome Family F082027

Basic Information
Family ID	F082027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	112 residues
Representative Sequence	MKSSSNPILSAISKSRAVLAIVLSISLLATGCSANWISIALADLPVLTQMALNIGTIITTLQSGKQISAADAAAIQNISAQASKDLNLLETLYNEYKSNPSTSALQKIQSVIADI
Number of Associated Samples	88
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.86 %
% of genes near scaffold ends (potentially truncated)	98.23 %
% of genes from short scaffolds (< 2000 bps)	88.50 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (76.106 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.469 % of family members)
Environment Ontology (ENVO)	Unclassified (24.779 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.912 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 67.13% β-sheet: 0.00% Coil/Unstructured: 32.87%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF02663	FmdE	61.95
PF01425	Amidase	11.50
PF01966	HD	0.88
PF13735	tRNA_NucTran2_2	0.88
PF02686	Glu-tRNAGln	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2191	Formylmethanofuran dehydrogenase subunit E	Energy production and conversion [C]	61.95
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	11.50
COG0721	Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit	Translation, ribosomal structure and biogenesis [J]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.11 %
Unclassified	root	N/A	23.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	15.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.89 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11.50 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003220\|JGI26342J46808_1026366	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300003505\|JGIcombinedJ51221_10320323	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300004092\|Ga0062389_100110882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2463	Open in IMG/M
3300004092\|Ga0062389_101776227	Not Available	797	Open in IMG/M
3300004152\|Ga0062386_100335044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1210	Open in IMG/M
3300004152\|Ga0062386_100467432	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300004635\|Ga0062388_100664875	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005445\|Ga0070708_100061292	All Organisms → cellular organisms → Bacteria	3360	Open in IMG/M
3300005454\|Ga0066687_10874839	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005610\|Ga0070763_10139808	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300005921\|Ga0070766_10335063	Not Available	979	Open in IMG/M
3300009523\|Ga0116221_1354339	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009553\|Ga0105249_11886787	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300009683\|Ga0116224_10268291	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300009698\|Ga0116216_10228509	Not Available	1138	Open in IMG/M
3300009760\|Ga0116131_1107527	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300009839\|Ga0116223_10312000	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300009839\|Ga0116223_10488100	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300010379\|Ga0136449_100128442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5060	Open in IMG/M
3300010379\|Ga0136449_101847082	Not Available	901	Open in IMG/M
3300010379\|Ga0136449_103771288	Not Available	571	Open in IMG/M
3300010398\|Ga0126383_12670488	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300011411\|Ga0153933_1014070	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2007	Open in IMG/M
3300012363\|Ga0137390_10953312	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300014501\|Ga0182024_11078531	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300017924\|Ga0187820_1287528	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300017928\|Ga0187806_1346747	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300017933\|Ga0187801_10195735	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300017943\|Ga0187819_10417826	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300017943\|Ga0187819_10451190	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300017943\|Ga0187819_10679239	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017943\|Ga0187819_10844712	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300017948\|Ga0187847_10087847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1722	Open in IMG/M
3300017948\|Ga0187847_10614608	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300017955\|Ga0187817_10065945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2247	Open in IMG/M
3300017955\|Ga0187817_10195391	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300017955\|Ga0187817_10346628	Not Available	947	Open in IMG/M
3300017966\|Ga0187776_11609892	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300017973\|Ga0187780_10236488	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300017973\|Ga0187780_10429379	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300017995\|Ga0187816_10208253	Not Available	851	Open in IMG/M
3300017995\|Ga0187816_10538405	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300018006\|Ga0187804_10598222	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300018013\|Ga0187873_1310625	Not Available	578	Open in IMG/M
3300018057\|Ga0187858_10437650	Not Available	807	Open in IMG/M
3300018062\|Ga0187784_10198219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1638	Open in IMG/M
3300018090\|Ga0187770_10007360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6782	Open in IMG/M
3300018090\|Ga0187770_11692519	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300020579\|Ga0210407_10499003	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300020580\|Ga0210403_10286451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1350	Open in IMG/M
3300020581\|Ga0210399_10156141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1887	Open in IMG/M
3300020582\|Ga0210395_10217421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1434	Open in IMG/M
3300020583\|Ga0210401_10522711	Not Available	1049	Open in IMG/M
3300020583\|Ga0210401_11231153	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300020583\|Ga0210401_11623517	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300021168\|Ga0210406_10332713	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300021178\|Ga0210408_10432110	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300021180\|Ga0210396_11665017	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300021181\|Ga0210388_10488159	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300021402\|Ga0210385_10435162	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300021402\|Ga0210385_11433814	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300021404\|Ga0210389_10201459	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1552	Open in IMG/M
3300021405\|Ga0210387_11640394	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300021432\|Ga0210384_10415342	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300021433\|Ga0210391_10209626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1532	Open in IMG/M
3300021433\|Ga0210391_10608771	Not Available	857	Open in IMG/M
3300021433\|Ga0210391_11449282	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300021478\|Ga0210402_10724624	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300021560\|Ga0126371_13668382	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300022709\|Ga0222756_1080994	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300022731\|Ga0224563_1002481	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300025986\|Ga0207658_11790136	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300026296\|Ga0209235_1274839	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300026313\|Ga0209761_1010579	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6003	Open in IMG/M
3300026322\|Ga0209687_1266338	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300027070\|Ga0208365_1048845	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300027565\|Ga0209219_1099208	Not Available	718	Open in IMG/M
3300027568\|Ga0208042_1092044	Not Available	768	Open in IMG/M
3300027604\|Ga0208324_1175079	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300027625\|Ga0208044_1069591	Not Available	1076	Open in IMG/M
3300027641\|Ga0208827_1177908	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300027662\|Ga0208565_1183591	Not Available	600	Open in IMG/M
3300027667\|Ga0209009_1089265	Not Available	781	Open in IMG/M
3300027696\|Ga0208696_1153718	Not Available	743	Open in IMG/M
3300027701\|Ga0209447_10093282	Not Available	827	Open in IMG/M
3300027767\|Ga0209655_10073923	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300027854\|Ga0209517_10299074	Not Available	941	Open in IMG/M
3300027855\|Ga0209693_10179187	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300027867\|Ga0209167_10201513	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300027895\|Ga0209624_10944069	Not Available	561	Open in IMG/M
3300027986\|Ga0209168_10028801	Not Available	3080	Open in IMG/M
3300028023\|Ga0265357_1009216	Not Available	978	Open in IMG/M
3300028906\|Ga0308309_10539784	Not Available	1010	Open in IMG/M
3300030659\|Ga0316363_10175825	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300030659\|Ga0316363_10271683	Not Available	684	Open in IMG/M
3300030659\|Ga0316363_10281611	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300030707\|Ga0310038_10033516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3037	Open in IMG/M
3300030707\|Ga0310038_10162855	Not Available	1097	Open in IMG/M
3300030763\|Ga0265763_1027993	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300030813\|Ga0265750_1018164	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300031708\|Ga0310686_105946034	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3872	Open in IMG/M
3300031715\|Ga0307476_10290172	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300031718\|Ga0307474_10937212	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300031753\|Ga0307477_10997322	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300031823\|Ga0307478_11093235	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300032160\|Ga0311301_10110161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5288	Open in IMG/M
3300032160\|Ga0311301_11326201	Not Available	906	Open in IMG/M
3300032783\|Ga0335079_10850795	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300032805\|Ga0335078_10318770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2080	Open in IMG/M
3300032805\|Ga0335078_11285995	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300032892\|Ga0335081_11958403	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300033158\|Ga0335077_11292315	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.46%
Host-Associated	Host-Associated	3.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.45%
Aquatic	Environmental → Aquatic	23.01%
Plants	Host-Associated → Plants	2.65%
Fungi	Host-Associated → Fungi	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.45%
Freshwater	Environmental → Aquatic → Freshwater	23.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.65%
Mycelium	Host-Associated → Fungi → Mycelium	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.62%
Loam	Environmental → Terrestrial → Soil → Loam	8.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.01%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	11.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	19.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	11.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.08%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011411	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ017 MetaG	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26342J46808_10263661	3300003220	Bog Forest Soil	MKSSLSSISKSRTALAIVLSISLIATGCSAQWISVALADLPVLTQMALNIGTIITTLESGQQINSTEAAAIQNISAQASKDLNLLATLYDEYKANPTASALQKIQSATADIN
JGIcombinedJ51221_103203232	3300003505	Forest Soil	MKSSSKPILASISKSKTVLAIVLSISLMATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGNQISAADATAIQNISAQASKDLNLLQALYNDYQASPNASNLQKI
Ga0062389_1001108821	3300004092	Bog Forest Soil	MKSSLSSISKSRTALAIVLSISLIATGCSAQWISVALADLPVLTQMALNIGTIITTLESGQQINSTEAAAIQNISAQASKDLNLLATLYDEYKANPTASALQKIQSATA
Ga0062389_1017762272	3300004092	Bog Forest Soil	MKSRSNPILSSISKSRTVLAIVLSISLITTGCSAQWLSIALADLPVLIQMALNIGTIVTTLESGKQISAADAAAIQNISAQASKDLNLLATLYNQYKADPSANTLEKIQGVIADINQ
Ga0062386_1003350443	3300004152	Bog Forest Soil	MKCNSRPKTMLVILLSCSLLATGCSAKWISIALADLPVLLQMALNMGTLVTTLESGKQLSAADVAAIQNISAQAAKDLNLLQQLYNQYKSAPTA
Ga0062386_1004674321	3300004152	Bog Forest Soil	MKSSSHPILSSISKSKTVLAIVLSISLIATGCSAQWISIALADLPVLTQMALNLGTIIATLQSGKQISAAEAAAIQNISVQASKDLNLLQALYNEYKANPSASALQKIQNAIADI
Ga0062388_1006648752	3300004635	Bog Forest Soil	MNAHSRPKALLVTLLFISLLATGCSAKWISVALADLPVLLQMALNIGTVVTTLESGKQVTSAEAAAVQNISNQASKDLNLLQTLYTQYKTAPSATTLQKIQSAIADMDQNLPALLQ
Ga0070708_1000612924	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNSNSKSKVGIAVVLAISLFATGCSAQWISVALADLPVLTQMALNIASLVATLQSGKQISPAEAAAIQNISTEASKDLNLLQALYNEYKANPSANTIQQIENVIGD
Ga0066687_108748391	3300005454	Soil	RIMLAVVLSISVIATGCSAQWISVALADLPVLTQMALNITALIATLQSGKQLNPTEASAIQNISAEASKDLTLLQGLYNAYKSNPSAATLQKIETVITDISQSLPALL*
Ga0070763_101398083	3300005610	Soil	MKSKSSLAQSPIAKSRTVLAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQTSTAEADAIQNISAQASKDLNLLATLYNEYKANPSASALQKIQGVIADIDQNLPALLQGAHIGDPVLSARV
Ga0070766_103350632	3300005921	Soil	MKSSLNLNAKSKTVLAIALSISLIATACSAQWISVALADLPVLTQMALNIGTIAATLDAGTQINPIDVAAIQNISAQASKDLNLLATLYNEYKSDPTA
Ga0116221_13543391	3300009523	Peatlands Soil	MKLNSSPALSPISKSRTVLAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQINAPEAAAIQNISAQASKDLNLLATLYNEYKTNPSASALQKIQGVIA
Ga0105249_118867871	3300009553	Switchgrass Rhizosphere	MTRILLSLVLSISLIATGCSAQWISVALADLPVLTQMALNIAALVSTLQSGKQLTPAEALAIQNISAQASKDLTLLQALYNSYKTNPSADTLQKIESLIQDTNQNLPALLQAAHIS
Ga0116224_102682912	3300009683	Peatlands Soil	VLSISLLATGCSARWISIALADLPVLTQMALNLGTIINTLQTGKQIGSADAVAIQNISAQASKDLNLLEALYSEYKANPSASALQKIQSVIADINQSL
Ga0116216_102285091	3300009698	Peatlands Soil	MKSNSISISKSKTVLAIVLSISLLATACSTQWISIALADLPVLTQMALNIGTIITTLQSGQQISAADAAAIQNISAQASKDLNLLE
Ga0116131_11075271	3300009760	Peatland	MSKSKTVLAIVLSISLLATGCSAQWISIALADLPVLTQMALNIGTIITTLQSGKQISSADAAAIQNISAQASKDLNLLETLYNEYKANPSASALQKIQSVIADIDQNLPALLQAAHIGDPVLSARV
Ga0116223_103120001	3300009839	Peatlands Soil	MKSNSIPISKSKTVLAIVLSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGRQISAADGAAIQNISAQASKDLNLLESLYNDYKSNSTTSALQKIQSAIADINQSLPALLQAAHIADPVL
Ga0116223_104881001	3300009839	Peatlands Soil	MMNSNSQSRIMVAILLSVSLLATGCSAQWISVALADLPVLVQMALNIGTLVTTLQSGKQLSSAEAVAIQNISTEASKDLNLLQTVYNQYKASPSGAGLQEIQNVISDINQNLPAVLQAAH
Ga0136449_1001284421	3300010379	Peatlands Soil	MKSTSNPILSPISKPKTVLAIVLSISLLATGCSASWISVALADLSVLIQMALNIGTIVTTLESDNQISAADAAAIQNISAQASKDLNLLAALYNEYQSNPSASALQKIQGVIADINQSLPALL
Ga0136449_1018470822	3300010379	Peatlands Soil	MKSNSIPISKSKTVLAIVLSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGQQISAADAAAIQNISAQASKDLNLLESLYNDYKSN
Ga0136449_1037712882	3300010379	Peatlands Soil	MVRTRKQQQPKPRRNFIMKSNSIPISKSKTVLAIVLSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGRQISAADAAAIQNISAQASKDLNLLESLYNDYKSNP
Ga0126383_126704881	3300010398	Tropical Forest Soil	MNSSSSSILNPIPRSKAALAIVLSVSLLATGCSDKWISVALADLPVLTQMALNIGTIVTTLQSGRQINSADAAAIQNISAQASKDLNLLQALYREYQANPGASTLQKIQAAIADMNLNLPAL
Ga0153933_10140701	3300011411	Attine Ant Fungus Gardens	MNSRPNRKLPSTPKIILAIIVSISLLATACSAQWLSVALADLPVLTQMALNIGTIVTTLQTGQQVTAADAAAIQNISAQAAKDLNLLESLYNQYKSDPSASG
Ga0137390_109533121	3300012363	Vadose Zone Soil	VALDELSLPTKNPEDPSLLATGCSAQWISVALADLPVLTQMALNIATLVATLQSGKQLSPAEAAAIQNISTEASKDLNLLQMLYNEYQANPSGGTIQKVENVISDINQNLPALLQAAHI
Ga0182024_110785311	3300014501	Permafrost	MKVVLAGVLCVALVATGCTAQWISVALADLPVLTQMALNITSLVVTLQSGQQISVADAAAVQNISNEASKDLNLLQTLYNQYKASPDAVTLQKIQSTIATINQNLPALLATV
Ga0187820_12875282	3300017924	Freshwater Sediment	MKSNSSPALTPISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAPEAAAIQNISAQASKDLNLLSTLYNEYKTNPNAGTLQKIQGVIADIDQ
Ga0187806_13467472	3300017928	Freshwater Sediment	MKSNSSPVLTPISKSRTILAIAVSISLIATGCSTQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAPEAAAIQNISAQASKDLNLLETLYNEYKANP
Ga0187801_101957351	3300017933	Freshwater Sediment	MKSNSISFSKSKTLLAIVLSISLLATACSTQWISIALADLPVLTQMALNIGTIITTLQSGQQISAADAAAIQNISAQASKDLNLLESLYNDYKSNPTTSAMQKIQSVIADINQSLPALLQ
Ga0187819_104178262	3300017943	Freshwater Sediment	MKSNSSPVLTPISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAPEAAAIQNISAQASKDLNLLETLYNEYKANQSAGTLQKIQGVIADIDQNLPALLQ
Ga0187819_104511902	3300017943	Freshwater Sediment	MKSSSNPILSSISISKSVLAIVLSISLIATGCSAQWLSIALADLPALTQMALNLGTIITTLQSGKQISAADAAAIQNISAQASKDLNLLQALYSEYKANPSASALQ
Ga0187819_106792391	3300017943	Freshwater Sediment	MKSNSRSKVTIVALLSLSLLATGCSAQWISVALADLPVLVQMALNIGTTVTTLQSGQQLSAADAAAIQNISNQASKDLNLLQALYNDYQANANTATIQKIQNVIADINTNLPALLQAVHISDAALSVRITA
Ga0187819_108447121	3300017943	Freshwater Sediment	MKSNSRPKTLLMMLLCLSLLATGCSAQWIKVALADLPVLLQMALNIGTLVTTLQSGQQLSSSEAAEIQNISNEASRDLNLLQTLYNEYEASPSPNSVQKIQNAIADINQNLPAL
Ga0187847_100878473	3300017948	Peatland	MRLNFKPTIILSLLLCISLLATGCSANWISVALEDLPVLTQMALNIGSLATTLQSGQQLTPAESAAIQNISAQAGKDLNLVQALYTEYKQSPNPATIQKIQAAITDINQNLPALLQAAHIGNAAL
Ga0187847_106146081	3300017948	Peatland	MKLSSISKSKTILAIVLSISLIATGCSAQWISIALADLPVLTQMALNIGTIITTLESGQQINSTEAAAIQNISAQAGKDLNLLATLYNEYKANPSASVLQKIQSAIADINQSLPALL
Ga0187817_100659451	3300017955	Freshwater Sediment	MKSNSNSISVSKSKTVLAIVLSISLLTTACSSQWISIALADLPVLTQMALNIGTIITTLQSGQQISAADAAAIQNISAQASKDLNLLESLYNDYKSNPTTSAMQEIQSVIADINQSLPALLQ
Ga0187817_101953912	3300017955	Freshwater Sediment	MKSNSISFSKSKTLLAIVLSISLLATACSTQWISIALADLPVLTQMALNIGTIITTLQSGQQISAADAAAIQNISAQASKDLNLLESLYNDYKSNPTTSALQKIQSVIADINQSLPALLQAAHIGDPVLSARI
Ga0187817_103466282	3300017955	Freshwater Sediment	MKSNSISVSQSKTLLAIVLSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGQQISSADAAAIQNISAQASKDLNLLESLYNEYKSNPSTSALQKIQSVIADINHSLPALLQ
Ga0187776_116098921	3300017966	Tropical Peatland	MHSSSMMKIVLTVGLSLSLLATGCSAQWVSVALADLPVLTQMALNIGTLVTTLESGKQLSTSEAAAIQNISAQASRDLNLLQALYSEYKETPSTSAIHKIQ
Ga0187780_102364881	3300017973	Tropical Peatland	MPAHSRSKTALIALLSLVLFASGCSAKWISVALADLPVLLQMALNIGTVVTTLESGKQLSSGEAAAIQDISNEASKDLNLLQSLYNQYKGTPSASTIQKIQSAIADMNQNLPAL
Ga0187780_104293791	3300017973	Tropical Peatland	MNVHSKSKVVFAILLCASLLSIGCTAQWISVALADLPVLTQMALNIGTLVTTLQSGQQLSSADAATIQNIASQASQDLNLLRTLYNEYEANPSASAIQKIDAAITDINQ
Ga0187816_102082532	3300017995	Freshwater Sediment	MKSNSISISQSKTLLAIVLSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGQQISSADAAAIQNISAQASKDLNLLESLYNEYKSNPSTSALQKIQSVIADINHSLPALLQ
Ga0187816_105384051	3300017995	Freshwater Sediment	MKSNSSPALTPISKSRTILAIAVSISLIATGCSTQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAPEAAAIQNISAQASKDLNLLETLYNEYKANPSASALQKIRGVIADIDQN
Ga0187804_105982221	3300018006	Freshwater Sediment	MKSNSSPVLTPISKSRTILAIALSISLIATGCSTQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAAEAAAIQNISAQASKDLNLLATLYNEYKTNPSASALQKIQGVIADIDQNL
Ga0187873_13106252	3300018013	Peatland	MKLSSNLTQSSILKSRTVLAIVLSISLIATGCSAQWISIALADLPALTQMALNLGTIITTLESGQQINPTEAAAIQNISAQASRDLNLLATLYNQYKANPSTVT
Ga0187858_104376502	3300018057	Peatland	MKLSSNLTQSSILKSRTVLAIVLSISLIATGCSAQWISIALADLPALTQMALNLGTIITTLESGQQINPTEAASIQNISAQASKDLNLLATLYNQYKA
Ga0187784_101982191	3300018062	Tropical Peatland	MKSNSRSKTLLVMLLSLSLLATGCSAQWISVALADLPVLVQMALNIGTLVTTLQSGNQLSSSEATEIQNIANEASRDLNLLQVLYNEYKANPSPTTIQKIQSAIVDINQNL
Ga0187770_100073607	3300018090	Tropical Peatland	MRGNSRPKIALVVVLCAALLATGCNADWISVALEDLPVLTQMALNIGTVVSTLQGGQQISAAEAAAIQNISAQASHDLNLLQSLYNEYKQAPNASTVQKIQ
Ga0187770_116925191	3300018090	Tropical Peatland	MIVHSKSKVVLAILLCASLLTIGCTAQWISVALADLPVLTQMALNIGTLVTTLQSGQQLSSTDAAAIQNISSQAGQDLNLLRTLYDEYEASPSTSAIQKIDAAISDINQNLPTLLQAAHI
Ga0210407_104990032	3300020579	Soil	MKSNSRPALSPISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAAEAAAIQNISAQASKDLNLLAMLYNEYKTNPSASTLQKIQGVIADVDQNLPALLQAAHIGDPVLSARIAAGVNL
Ga0210403_102864511	3300020580	Soil	MKSSSNPILSAISKSRAVLAIVLSISLLATGCSANWISIALADLPVLTQMALNIGTIITTLQSGKQISAADAAAIQNISAQASKDLNLLETLYNEYKSNPSTSALQKIQSVIADINQNLPALLQAAHLGDPVLSARVAAGV
Ga0210399_101561413	3300020581	Soil	MKSSSNPILSAISKSRAVLAIVLSISLLATGCSANWISIALADLPVLTQMALNIGTIITTLQSGKQISAADAAAIQNISAQASKDLNLLETLYNEYKSNPSTSALQKIQSVIADI
Ga0210395_102174211	3300020582	Soil	MKFSSHSMQSSNLKSRMILAILLSISLIATGCSAQWISIALADLPALTQMALNLGTIITTLESGQRINPTEAASIQNISAQASKDLNLLATLYNQYKANPSTGTLQKIQSAIADINQSLPALLQAAHISD
Ga0210401_105227113	3300020583	Soil	MKSSSNPILSAISKSRAVLAIVLSISLLATGCSANWISIALADLPVLTQMALNIGTIITTLQSGKQISAADAAAIQNISAQASKDLNLLETLY
Ga0210401_112311531	3300020583	Soil	MKLISTLILRAIRNHRPILAAVLSISLLGTGCSAQWISIALADLPVLTQMALNIGTIVASLQSGSQISAADAAAIQNLSAQASRDLNLLQSLYNGYKSNPSANALQKIQNVIADINQSLPALLQ
Ga0210401_116235171	3300020583	Soil	MKLSSISKSKTVLAMVLSISLIATGCSAQWISIALADLPVLTQMALNIGTIITTLESGQQISATEAAAIQDISAQASKDLNLLATLYDQYQADPSASGLQKIQSVIADINESLPA
Ga0210406_103327133	3300021168	Soil	MKSNSRPALSPISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAAEAAAIQNISAQASKDLNLLAMLYNEYKTNPSASTLQKIQGVIADVDQNLPALLQAAHIGDPVLS
Ga0210408_104321102	3300021178	Soil	MKLNSSPAQSPISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAAEAAAIQNISAQASKDLNLLAMLYNEYKTNPSASTLQKIQGVIADV
Ga0210396_116650171	3300021180	Soil	MKSKSSLAQSPIAKSRTVLAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQTSTAEADAIQNISAQASKDLNLLATLYNEYKANPSASA
Ga0210388_104881592	3300021181	Soil	MKSNSSLAQSPISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQIGVPEAAAIQNISAQASKDLNLLATLYNEYKANPSASTLQKIRGVIADVDQNLPALLQAAHIGDPVLSAR
Ga0210385_104351621	3300021402	Soil	MTSNSNSILRTISKPKTVLAIVLSISLLATGCSAQWLTIALADLPVLVQMALNIGTIVSTLESGKQISPADAAAIQNISAQASKDLNLLATLYNEYKAEPTATTLEKIQSVIADINQSLP
Ga0210385_114338141	3300021402	Soil	MKSNSSPAQSPISKSRTILAIALSISLIATGCSAQWISVALADLPVLIQMALNIGTIVTTLQSGQQISAPEAAAIQNISAQASKDLNLLATLYNEYKANPSAGALQKIQGVIADIDQNLPAL
Ga0210389_102014591	3300021404	Soil	MGSNSKAKIGLALVLSLSIFATGCSAQWVNVALADLPVLTQMALNIAAMVATLQSGKQASAAELAAVQNISAEASKDLTLLQTFYNDYKASPSADAMQKIENVIADINQNLPALLQAAHISD
Ga0210387_116403942	3300021405	Soil	MKSNANPILRSISKSKPVLAIVLSISLLATGCSAQWISIALADLPVLIQMALNIGTIVATLQSGKQISPAEAAAIQNISDQASKDLNLLATLYNDYKANPSATALQK
Ga0210384_104153421	3300021432	Soil	MKKAVVAIVLSVVLITTGCSGSWISVALADLPVLTQMALNIGTLVSTLQSGKAISASDASAISNISSQASKDLNLLSALYNDYQKSPGPSGLAQIQGVIADINQNLPALLQAA
Ga0210384_108353891	3300021432	Soil	MNSSLNPILTTVWKSRIVLAIVLSISLLATGCSAQWISIALADLPVLTQMALNIGTIITTLQSGKQISAADAAAIQNISAQASK
Ga0210391_102096261	3300021433	Soil	MKLNSNSISKSKIVLATALSISLIATGCSAQWISIALADLPVLTQMALNLGTIMATLESGQQINPAEAAAIQNISAQASKDLNLLATLYNEYQANPSASVLQKIQSAVADINQSLPALLQAAHISDPI
Ga0210391_106087712	3300021433	Soil	MKLSSNLTESSILKSRTVLAILLSISLIATGCSTQWISIALADLPALTQMALNLGTIITTLESGQQISPTEAAAIQNISAQASKDLNLLATLYNQYKANPSTGTLQKIQSAIAYIN
Ga0210391_114492821	3300021433	Soil	MNSSSISKSRTLLAILLSISLIATGCSTQWIKIALADLPALTQMALNLGTIITTLESGQRINPTEAASIQNISAQASKDLNLLATLYNQYKANPSTGTLQKIQSAIADINQSLPALLQAA
Ga0210402_107246242	3300021478	Soil	MKCNSRPKAALAVLLAISMLATGCTAQWISIALADLPVLLQMALNIGSLVATLQSGQQLSASEAQAIQNIAAEASKDLNLLQTLYNQYQANPTASALQKIQSTVVDISRTCLRCCKQPTLEIRCWPPELLQR
Ga0126371_136683821	3300021560	Tropical Forest Soil	MNSSSILNAIPKSKVALAIVLSVSLLATGCSDKWISVALADLPVLTQMALNIGTIVATLQSRRQINNADATAIQNISAQASKDLNL
Ga0222756_10809942	3300022709	Soil	SISLMATGCSTQWIGIALADLPALIQMALNIGTIVTTLQSGNQISATDAAVIQNISVQASKDLNLLQAFYNDYKANPNASALQKIEA
Ga0224563_10024813	3300022731	Soil	MNSSSISKSRTILAIVLSISLIATGCSAQWISIALADLPALTQMALNLGTIITTLESGQQISPTEAAAIQNISAQASKDLNLLATLYNQYKASPSTSALQKIQ
Ga0207658_117901361	3300025986	Switchgrass Rhizosphere	MKANSMSRILLAIVLSISLIVTGCSAQWISVALADLPVLTQMALNIAALVASLQSGKQLTIAEALAIQNISAEASKDLTLLQALYNSYKTNPSADTLQKIEGLIQDTNQSLPALLQAAHI
Ga0209235_12748391	3300026296	Grasslands Soil	MNSNSKSKVAIAVVLAISLFATGCSAQWIRVALADLPVLTQMALNIASLVATLQSGKQISPAEAAAIQNISTEASKDLNLLQALYNEYKANPNANTIQQIENVIGDINQ
Ga0209761_10105797	3300026313	Grasslands Soil	MNSNSKSKVAIAVVLAISLFATGCSAQWISVALADLPVLTQMALNIASLVATLQSGKQISPAEAAAIQNISTEASKDLNLLQALYNEYKANPSANTI
Ga0209687_12663382	3300026322	Soil	RIMLAVVLSISVIATGCSAQWISVALADLPVLTQMALNITALIATLQSGKQLNPTEASAIQNISAEASKDLTLLQGLYNAYKSNPSAATLQKIETVITDISQSLPALL
Ga0208365_10488452	3300027070	Forest Soil	MKSSSKPILASISKSKTVLAIVLSISLMATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGNQISAADATAIQNISAQASKDLNLLQALYNDYQASPN
Ga0209219_10992081	3300027565	Forest Soil	MNSSLNPILTTVSKSRIVLAIVLSISLLATGCSAQWISIALADLPVLTQMALNIGTLITTLQSGQHISAADAAAIQNISAQASKDLNLLESLYNEYKSNPNAS
Ga0208042_10920441	3300027568	Peatlands Soil	MKSTSNPILSPISKPKTVLAIVLSISLLATGCSASWISVALADLSVLIQMALNIGTIVTTLESDNQISAADAAAIQNISAQASKDLNLLAALYNEYQSNPSASA
Ga0208324_11750791	3300027604	Peatlands Soil	MMNSNSQSRIMVAILLSVSLLATGCSAQWISVALADLPVLVQMALNIGTLVTTLQSGKQLSSAEAVAIQNISTEASKDLNLLQTVYNQYKASPSGAGLQEIQNVISDINQN
Ga0208044_10695912	3300027625	Peatlands Soil	MKSTSNPILIPISKPKTVLAIVLSISLLATGCSASWISVALADLSVLIQMALNIGTIVTTLESDNQISAADAAAIQNISAQASKDLNLLAALYNEYQSNPSASALQKIQGVIADINQSLPALLLAAH
Ga0208827_11779082	3300027641	Peatlands Soil	MKLNSSPALSPISKSRTVLAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQINAPEAAAIQNISAQASKDLNLLATLYNE
Ga0208565_11835911	3300027662	Peatlands Soil	MKSTSNPILIPISKPKTVLAIVLSISLLATGCSASWISVALADLSVLIQMALNIGTIVTTLESDNQISAADAAAIQNISAQASKDLNLLAALYNEYQSNPS
Ga0209009_10892652	3300027667	Forest Soil	MNSRPNRKLSSTPKIILAIILSISLLATACSAQWLSVALADLPVLTQMALNIGTIITTLQSGQQISAADAAAIQNISAQAAKDLNLLESLYNQYKSNPSASGLQK
Ga0208696_11537182	3300027696	Peatlands Soil	MKSSSNPILSSIAKSRTVLAIVLSISLLATGCSARWISIALADLPVLTQMALNLGTIINTLQTGKQIGSADAVAIQNISAQASKDLNLLEALYSEYKANP
Ga0209447_100932822	3300027701	Bog Forest Soil	MKSSLSSISKSRTALAIVLSISLIATGCSAQWISVALADLPVLTQMALNIGTIITTLESGQQINSTEAAAIQNISAQASKDLNLLATLYDEYKANPT
Ga0209655_100739231	3300027767	Bog Forest Soil	MKSSLSSISKSRTALAIVLSISLIATGCSAQWISVALADLPVLTQMALNIGTIITTLESGQQINSTEAAAIQNISAQASKDLNLLATLYDEYKANPTA
Ga0209517_102990741	3300027854	Peatlands Soil	MKSNSIPISKSKTVLAIVLSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGQQISAADAAAIQNISAQASKDLNLLESLYNDYKSNPTTS
Ga0209693_101791871	3300027855	Soil	MKSNSSPAQSPISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQTSTAEADAIQNISAQASKDLNLLATLYNEYKANPSASALQKIQGVIADIDQNLPALLQGAHIGDPVLSARVTAGVNL
Ga0209167_102015132	3300027867	Surface Soil	MNANSRWKTVLVLVLSISLLATGCSAQWISVALADLPVLVQMALNMGTLVTTLQSGQQLSPAEAAAIQNISAEASKDLNLLQTLYNDYKANPSAGTMQKIQPTIADINQNLPALLEAAHVGDPTLSA
Ga0209624_109440691	3300027895	Forest Soil	MNSNLKLSSTPKIILAMLLSISLLATACSAQWLSVALADLPVLTQMALNIGTIITTLQSGQQVSAADAAAIQNISAQASKDLNLLE
Ga0209168_100288011	3300027986	Surface Soil	MNSSLNRKLSAMPKIALVIALSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGQQISAADAVAIQNISAQASKDLNLLESFYNQYKSNPSASG
Ga0265357_10092161	3300028023	Rhizosphere	MKSNSRPALSTISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQISAAEAAAIQNISAQASKDLNLLAMLY
Ga0308309_105397842	3300028906	Soil	MKSSLNLNAKSKTVLAIALSISLIATACSAQWISVALADLPVLTQMALNIGTIAATLDAGTQINPIDVAAIQNISAQASKDLNLLATLYNEYKSDPTASALEKI
Ga0316363_101758252	3300030659	Peatlands Soil	MKSSSNPILSSISTSKTVLAIVLSISLIATGCSAQWLSIALADLPALTQMALNLGTIITTLQSGKQISAADAAAIQNISAQAGKDLNLLQALYNEYKTNPSASALQKIQSVIADINQSLPALLQAANIGDPVLS
Ga0316363_102716831	3300030659	Peatlands Soil	MKSNSIPISKSKTVLAIVLSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGQQISAADAAAIQNISAQASKDLNLLES
Ga0316363_102816112	3300030659	Peatlands Soil	MMNSNSQSRIMVAILLSVSLLATGCSAQWISVALADLPVLVQMALNIGTLVTTLQSGKQLSSAEAVAIQNISTEASKDLNLLQTVYNQYKASPSGAGLQEIQNVISDINQNL
Ga0310038_100335161	3300030707	Peatlands Soil	MKSSSNPILSSIAKSRTVLAIVLSISLLATGCSAQWISIALADLPVLTQMALNLGTIINTLQTGKQIGSADAVAIQNMSAQASKDLNLLEALYSEYKANPSASALQKIQSVIADINQSLP
Ga0310038_101628551	3300030707	Peatlands Soil	MKSTSNPILSPISKPKTVLAIVLSISLLATGCSASWISVALADLSVLIQMALNIGTIVTTLESDNQISAADAAAIQNISAQASKDLNLLAALYNEYQSNPSASALQKIQGVIADINQSLPALLL
Ga0265763_10279932	3300030763	Soil	MKSNSSPTQSPISKSRTILAIALSISLIATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGQQIGVPEAAAIQNISAQASKALNLLATLYTEYKANPSAGALQKIQGVIADIDQNL
Ga0265750_10181641	3300030813	Soil	MKSNSSPTQRPISKSRTILAIALSISLIATGCSAQWISVALADLPVLIQMALNIGTIVTTLQSGQQISAPEAAAIQNISAQASKDLNLLATLYNEYKANPSASALQKIQGVIADIDQNLPALLQAAHIGNPVLSA
Ga0310686_1059460345	3300031708	Soil	MNSSSISKSRTILAIVLSISLITTGCSAQWISIALADLPALMQMALNLGTIIATLQSGQQISPTEAAAIQNISAQASKDLNLLATLYNEYKANPSTSALKKIQGVIADINQSLPALLQAAHISDPVLSV
Ga0307476_102901721	3300031715	Hardwood Forest Soil	MKLSSNSILGSISKSKTVFAIVLSISLLATGCSAQWISIALADLPVLTQMALNIGTIITTLQSGKQISAADAAAIQSISAQASKDLNLLKSLYNEYQSNPSTSALQKIENV
Ga0307474_109372121	3300031718	Hardwood Forest Soil	MNSSSISKPRTLLAIVLLISLIATGCNAQWISIALADLPVLTQMALNIGTIITTLESGQQISATEAAAIQDISAQASKDLNLLATLYDQYQADPSASG
Ga0307477_109973221	3300031753	Hardwood Forest Soil	MKSSSKPILASISKSKTVLAIVLSISLMATGCSAQWISIALADLPVLIQMALNIGTIVTTLQSGNQISAADATAIQNISAQASKDLNLLQALYNDYQASPNASNLQKIESVIADINQSLPALLQA
Ga0307478_110932352	3300031823	Hardwood Forest Soil	MKLSSISKSKTVLAMVLSISLIATGCSAQWISIALADLPVLTQMALNIGTIITTLESGQQISATEAAAIQDISAQASKDLNLLATLYDQYQADPSASGLQKIQ
Ga0311301_101101611	3300032160	Peatlands Soil	MKSTSNPILIPISKPKTVLAIVLSISLLATGCSASWISVALADLSVLIQMALNIGTIVTTLESDNQISAADAAAIQNISAQASKDLNLLAALYNEYQSNPSASALQKIQGVIADINQSLPALL
Ga0311301_113262012	3300032160	Peatlands Soil	MKSNSIPISKSKTVLAIVLSISLLATACSAQWISIALADLPVLTQMALNIGTIITTLQSGRQISAADAAAIQNISAQASKDLNLLESLYNDYKSNP
Ga0335079_108507952	3300032783	Soil	MFHSTSKLTLVALLTISLTATGCSPQWISIALADLPVLQQMALNIGTTVATLESGQQLSAADAAVIQNISTEATKDLNLLQSLYNDYKTTANAATMQKIQSVI
Ga0335078_103187701	3300032805	Soil	MYIYSRSKVALLVLLSLSLTTTACSAKWIGVALADLPVLLQMALNIGTVVTTLESGKQISSAESAEIQNISTEASKDLNLLQTLYNQYKAAPSASTLQKIQSAIADMNQSLPAL
Ga0335078_112859952	3300032805	Soil	MPAHSRSKTALIALLSLVLFASGCSARWISVALADLPVLVQMALNVGTVVTTLESGKQLSPGETAAIRNISNEASKDLNLLQSLYQQYKATPSASTIQKIQSAIADMNQNLSALLQAAHI
Ga0335081_119584032	3300032892	Soil	MPAHSRSKTALIALLSLVLFASGCSARWISVALADLPVLVQMALNVGTVVTTLESGKQLSPGETAAIRNISNEASKDLNLLQSLYQQYKATPSASTIQKIQSAIADMNQNLSALLQAAHINDATLSAR
Ga0335077_112923152	3300033158	Soil	MHCNSRSKAALAIVLSASLLATGCSAQWISVALADLPVLVQMSLNIGTLVTTLQSGQQLTSAEAAAIQNISAEASKDLNLLQVLYNEYKANPSNAVLQKIQNAIGDINQNLPTLLQAAHI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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