NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F081687

Metagenome / Metatranscriptome Family F081687

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F081687
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 87 residues
Representative Sequence MDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Number of Associated Samples 90
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 52.63 %
% of genes near scaffold ends (potentially truncated) 33.33 %
% of genes from short scaffolds (< 2000 bps) 64.91 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(30.702 % of family members)
Environment Ontology (ENVO) Unclassified
(52.632 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(60.526 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.48%    β-sheet: 10.34%    Coil/Unstructured: 55.17%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF00072Response_reg 46.49
PF12146Hydrolase_4 7.89
PF00528BPD_transp_1 7.89
PF00679EFG_C 3.51
PF06127Mpo1-like 2.63
PF00892EamA 1.75
PF02223Thymidylate_kin 0.88
PF03144GTP_EFTU_D2 0.88
PF12697Abhydrolase_6 0.88
PF04116FA_hydroxylase 0.88
PF00497SBP_bac_3 0.88
PF04909Amidohydro_2 0.88
PF00378ECH_1 0.88
PF00160Pro_isomerase 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG45392-hydroxy fatty acid dioxygenase MPO1 (alpha-oxidation of fatty acids)Lipid transport and metabolism [I] 2.63
COG0125Thymidylate kinaseNucleotide transport and metabolism [F] 0.88
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 0.88
COG3000Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamilyLipid transport and metabolism [I] 0.88

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10616867All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300002558|JGI25385J37094_10006554All Organisms → cellular organisms → Bacteria4118Open in IMG/M
3300002561|JGI25384J37096_10002906All Organisms → cellular organisms → Bacteria5993Open in IMG/M
3300005166|Ga0066674_10005097All Organisms → cellular organisms → Bacteria → Proteobacteria5101Open in IMG/M
3300005166|Ga0066674_10015722All Organisms → cellular organisms → Bacteria → Proteobacteria3207Open in IMG/M
3300005167|Ga0066672_10045224All Organisms → cellular organisms → Bacteria2498Open in IMG/M
3300005171|Ga0066677_10000886All Organisms → cellular organisms → Bacteria → Proteobacteria10224Open in IMG/M
3300005171|Ga0066677_10571465All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300005172|Ga0066683_10666541All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005175|Ga0066673_10001850All Organisms → cellular organisms → Bacteria7533Open in IMG/M
3300005175|Ga0066673_10034405All Organisms → cellular organisms → Bacteria → Proteobacteria2460Open in IMG/M
3300005180|Ga0066685_10212534All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1329Open in IMG/M
3300005181|Ga0066678_10233131All Organisms → cellular organisms → Bacteria → Proteobacteria1186Open in IMG/M
3300005184|Ga0066671_10128116All Organisms → cellular organisms → Bacteria1450Open in IMG/M
3300005187|Ga0066675_10012221All Organisms → cellular organisms → Bacteria → Proteobacteria4567Open in IMG/M
3300005445|Ga0070708_100015428All Organisms → cellular organisms → Bacteria6310Open in IMG/M
3300005446|Ga0066686_10005229All Organisms → cellular organisms → Bacteria6202Open in IMG/M
3300005536|Ga0070697_100047183All Organisms → cellular organisms → Bacteria → Proteobacteria3493Open in IMG/M
3300005540|Ga0066697_10140834All Organisms → cellular organisms → Bacteria1421Open in IMG/M
3300005553|Ga0066695_10470355All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300005555|Ga0066692_10298610All Organisms → cellular organisms → Bacteria → Proteobacteria1021Open in IMG/M
3300005559|Ga0066700_10697742All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300005574|Ga0066694_10154293All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1089Open in IMG/M
3300005586|Ga0066691_10392917All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300006031|Ga0066651_10029215All Organisms → cellular organisms → Bacteria2452Open in IMG/M
3300006032|Ga0066696_11018038All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300006046|Ga0066652_100015031All Organisms → cellular organisms → Bacteria → Proteobacteria5137Open in IMG/M
3300006173|Ga0070716_100333617All Organisms → cellular organisms → Bacteria1067Open in IMG/M
3300006755|Ga0079222_10932188All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300006791|Ga0066653_10138461All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1168Open in IMG/M
3300006791|Ga0066653_10223901All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300006796|Ga0066665_10054479All Organisms → cellular organisms → Bacteria2771Open in IMG/M
3300006800|Ga0066660_10177276All Organisms → cellular organisms → Bacteria → Proteobacteria1604Open in IMG/M
3300006871|Ga0075434_100851435All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300006904|Ga0075424_101942361All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006954|Ga0079219_10056222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1724Open in IMG/M
3300007255|Ga0099791_10008875All Organisms → cellular organisms → Bacteria → Proteobacteria4169Open in IMG/M
3300007258|Ga0099793_10005507All Organisms → cellular organisms → Bacteria → Proteobacteria4590Open in IMG/M
3300007265|Ga0099794_10001922All Organisms → cellular organisms → Bacteria7470Open in IMG/M
3300007265|Ga0099794_10180988All Organisms → cellular organisms → Bacteria1076Open in IMG/M
3300009137|Ga0066709_101563510All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium947Open in IMG/M
3300009137|Ga0066709_103979933All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium537Open in IMG/M
3300009147|Ga0114129_10411536All Organisms → cellular organisms → Bacteria1780Open in IMG/M
3300010303|Ga0134082_10012484All Organisms → cellular organisms → Bacteria → Proteobacteria3074Open in IMG/M
3300010335|Ga0134063_10012974All Organisms → cellular organisms → Bacteria → Proteobacteria3307Open in IMG/M
3300010336|Ga0134071_10001655All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria8076Open in IMG/M
3300011271|Ga0137393_10090149All Organisms → cellular organisms → Bacteria2484Open in IMG/M
3300012198|Ga0137364_11120148All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300012202|Ga0137363_11002320All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300012203|Ga0137399_10263514All Organisms → cellular organisms → Bacteria1416Open in IMG/M
3300012203|Ga0137399_10282495All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300012203|Ga0137399_11571105All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300012349|Ga0137387_10068739All Organisms → cellular organisms → Bacteria2408Open in IMG/M
3300012362|Ga0137361_10412298All Organisms → cellular organisms → Bacteria → Proteobacteria1241Open in IMG/M
3300012396|Ga0134057_1111802All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300012582|Ga0137358_10112674All Organisms → cellular organisms → Bacteria1845Open in IMG/M
3300012685|Ga0137397_10113403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1994Open in IMG/M
3300012685|Ga0137397_11083736All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300012918|Ga0137396_10162904All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300012918|Ga0137396_10658905All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300012922|Ga0137394_10429954All Organisms → cellular organisms → Bacteria → Proteobacteria1125Open in IMG/M
3300012922|Ga0137394_11119680All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300012923|Ga0137359_10051598All Organisms → cellular organisms → Bacteria → Proteobacteria3577Open in IMG/M
3300012925|Ga0137419_10068228All Organisms → cellular organisms → Bacteria2360Open in IMG/M
3300012929|Ga0137404_10163847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1859Open in IMG/M
3300012929|Ga0137404_10223844All Organisms → cellular organisms → Bacteria1604Open in IMG/M
3300012929|Ga0137404_10247890All Organisms → cellular organisms → Bacteria → Proteobacteria1527Open in IMG/M
3300012930|Ga0137407_11675802All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300012944|Ga0137410_11880188All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300012975|Ga0134110_10233576All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium779Open in IMG/M
3300014154|Ga0134075_10000592All Organisms → cellular organisms → Bacteria11267Open in IMG/M
3300015264|Ga0137403_10002714All Organisms → cellular organisms → Bacteria21533Open in IMG/M
3300015264|Ga0137403_10263204All Organisms → cellular organisms → Bacteria1631Open in IMG/M
3300015356|Ga0134073_10322505All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium558Open in IMG/M
3300015357|Ga0134072_10051481All Organisms → cellular organisms → Bacteria → Proteobacteria1147Open in IMG/M
3300017656|Ga0134112_10010426All Organisms → cellular organisms → Bacteria3069Open in IMG/M
3300018431|Ga0066655_10044351All Organisms → cellular organisms → Bacteria2255Open in IMG/M
3300018431|Ga0066655_10068889All Organisms → cellular organisms → Bacteria → Proteobacteria1890Open in IMG/M
3300018433|Ga0066667_10031238All Organisms → cellular organisms → Bacteria → Proteobacteria2996Open in IMG/M
3300018433|Ga0066667_10847353All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300018468|Ga0066662_10237990All Organisms → cellular organisms → Bacteria1476Open in IMG/M
3300018468|Ga0066662_10490576All Organisms → cellular organisms → Bacteria → Proteobacteria1115Open in IMG/M
3300018482|Ga0066669_10101594All Organisms → cellular organisms → Bacteria → Proteobacteria1998Open in IMG/M
3300018482|Ga0066669_10377492All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300020170|Ga0179594_10009261All Organisms → cellular organisms → Bacteria2686Open in IMG/M
3300020170|Ga0179594_10138200All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300020199|Ga0179592_10155304All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300024330|Ga0137417_1172192All Organisms → cellular organisms → Bacteria → Proteobacteria1911Open in IMG/M
3300024330|Ga0137417_1259797All Organisms → cellular organisms → Bacteria → Proteobacteria2449Open in IMG/M
3300025910|Ga0207684_11552438All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300025939|Ga0207665_10282239All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300026295|Ga0209234_1005788All Organisms → cellular organisms → Bacteria → Proteobacteria4684Open in IMG/M
3300026295|Ga0209234_1147619All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300026301|Ga0209238_1159244All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300026306|Ga0209468_1078654All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1102Open in IMG/M
3300026306|Ga0209468_1161474All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300026312|Ga0209153_1090767All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales1137Open in IMG/M
3300026316|Ga0209155_1005223All Organisms → cellular organisms → Bacteria → Proteobacteria5818Open in IMG/M
3300026342|Ga0209057_1069824All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1537Open in IMG/M
3300026343|Ga0209159_1060248All Organisms → cellular organisms → Bacteria1804Open in IMG/M
3300026527|Ga0209059_1139530All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300026528|Ga0209378_1000094All Organisms → cellular organisms → Bacteria57271Open in IMG/M
3300026537|Ga0209157_1028358All Organisms → cellular organisms → Bacteria → Proteobacteria3285Open in IMG/M
3300026540|Ga0209376_1128634All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300026542|Ga0209805_1095147All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300026542|Ga0209805_1232389All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300026548|Ga0209161_10136326All Organisms → cellular organisms → Bacteria → Proteobacteria1434Open in IMG/M
3300026550|Ga0209474_10078811All Organisms → cellular organisms → Bacteria2268Open in IMG/M
3300026551|Ga0209648_10031848All Organisms → cellular organisms → Bacteria → Proteobacteria4597Open in IMG/M
3300027775|Ga0209177_10064803All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300028536|Ga0137415_10002729All Organisms → cellular organisms → Bacteria17472Open in IMG/M
3300028536|Ga0137415_10531059All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300031820|Ga0307473_10677602All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300032180|Ga0307471_100003269All Organisms → cellular organisms → Bacteria9628Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil30.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil30.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil14.04%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.39%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.39%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.63%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.63%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.75%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.88%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1061686713300001661Forest SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTTVVGLAKSPAILRDRWTCKSCRQHTLVTRAVPNATFALGRR
JGI25385J37094_1000655473300002558Grasslands SoilMDLADRARGFLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNATFALNRRSRGRLGRLA*
JGI25384J37096_1000290693300002561Grasslands SoilMDPADRARGFLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNA
Ga0066674_1000509733300005166SoilLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNATFALNRRSRGRLGRLA*
Ga0066674_1001572263300005166SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0066672_1004522423300005167SoilMDLADRARGFLILHESADFCDDCLGKALGITGEQARSIVVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066677_1000088673300005171SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0066677_1057146513300005171SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTTVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066683_1066654123300005172SoilMDPADRARGFLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNATFALNRRSRGRLGRLA*
Ga0066673_1000185063300005175SoilMDLAARAKGFLILHEGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0066673_1003440533300005175SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066685_1021253413300005180SoilMDLVGCARGFLILHEGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066678_1023313113300005181SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRL
Ga0066671_1012811643300005184SoilHEGADFCDDCLARALGVDAAQARATLTTLAKSPAILRDRWTCKSCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0066675_1001222143300005187SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQIRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0070708_10001542893300005445Corn, Switchgrass And Miscanthus RhizosphereMDLADRARGFLILHESADFCDSCLGKALGITAEQARTIVVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALSRRSRNRLGRTA*
Ga0066686_1000522913300005446SoilMDLVGCARGFLILHEGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRRHQLVTRAIPNLTFALSRRSRSRLRRTA*
Ga0070697_10004718343300005536Corn, Switchgrass And Miscanthus RhizosphereMDLADRARGFLILHESADFCDDCLGKALGIAADQARSIAVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066697_1014083433300005540SoilMDLAARARGFLILREGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0066695_1047035523300005553SoilTLCWYRAGLMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066692_1029861023300005555SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066700_1069774223300005559SoilMDLADRARGFLILHESADFCDDCLGKALGITGEQARSIVVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRS
Ga0066694_1015429313300005574SoilLRAHGLLLHEPAMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0066691_1039291713300005586SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTTVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRFGRTA*
Ga0066651_1002921523300006031SoilMDLADRARGFLILHESADFCDDCLGKALGITAEEARTTVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066696_1101803813300006032SoilRGFLILHESADFCDDCLGKALGITAEQARTTVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066652_10001503113300006046SoilRAHGLLLHEPAMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0070716_10033361713300006173Corn, Switchgrass And Miscanthus RhizosphereILHESADFCDSCLGKALGITAEQARTIVVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0079222_1093218813300006755Agricultural SoilMQAAIPGTRFARLPAGLMNLADRARGFLILHESADFCDECLAKALGTTPAQAHSVVVSLSKSAAILRDRWTCSVCRRHAYVTRAIPNATFALNRRSRGRLGRIA*
Ga0066653_1013846113300006791SoilLLLHEPAMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0066653_1022390123300006791SoilMDLADRARGFLILHESADFCDDCLGKALGITAEEARTTVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0066665_1005447913300006796SoilLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNATFALNRRS
Ga0066660_1017727633300006800SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTHVSRAIANPTFALNRRSRTRLRRTA*
Ga0075434_10085143523300006871Populus RhizosphereMAPSCVVRVLAECKSPGTWIAVQTKPVMDFAALAKGFLILHEGADFCDDCLARALGVDAAQARATLTTLGKSPAFLRDQWTCKSCRRSTLVTRAIANPTFALNRRSRTRLRRTA*
Ga0075424_10194236123300006904Populus RhizosphereMNLADRARGFLILHESADFCDECLAKALGTTPAQAQSIVVGLSKSAAILRDRWTCSVCRRHAYVTRAIANGTFALNRRSRSRLGRIA*
Ga0079219_1005622213300006954Agricultural SoilMNLADRARGFLILHESADFCDECLAKALGTTPAQAHSVVVSLSKSAAILRDRWTCSVCRRHAYVTRAIPNATFALNRRSRGRLGRIA*
Ga0099791_1000887543300007255Vadose Zone SoilLILHESADFCDDCLGKALGIRAEQARSIVEGLAKSPAILRDRWTCKSCRQGTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0099793_1000550733300007258Vadose Zone SoilMDLVDRTRGFLILHESADFCDDCLGKALGIRAEQARSIVEGLAKSPAILRDRWTCKSCRQGTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0099794_1000192233300007265Vadose Zone SoilMDLVDRARGFLILHESADFCDDCLGKALGITAEQARSIVEGLAKSPAILRDRWTCKSCRQGTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0099794_1018098823300007265Vadose Zone SoilMDLVGRAKGFLILHESADFCDDCLAKALGITAMQARMVVAELAKSAAILRDYWTCKSCRRQAEVTRAIPNATFALSRRSRNRLGRTA*
Ga0066709_10156351033300009137Grasslands SoilLLHEPAMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0066709_10397993323300009137Grasslands SoilLLHEPAMDLAARARGFLILHEGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTHVSRAIANPTFALNRRSRTRLRRTA*
Ga0114129_1041153633300009147Populus RhizosphereMDFAALAKGFLILHEGADFCDDCLARALGVDAAQARATLTTLGKSPAFLRDQWTCKSCRRSTLVTRAIANPTFALNRRSRTRLRRTA*
Ga0134082_1001248423300010303Grasslands SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKSCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0134063_1001297423300010335Grasslands SoilMDLAARARRFLILHEGAAFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRSRLRRTA*
Ga0134071_10001655133300010336Grasslands SoilMTSAVMDLVGCARGFLILHEGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRRHQLVTRAIPNLTFALSRRSRSRLRRTA*
Ga0137393_1009014933300011271Vadose Zone SoilLILHESADFCDDCLGKALGIRAEQARSIVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137364_1112014823300012198Vadose Zone SoilVMDLVGRAKGFLILHEGADFCDECMGRALGITAAQARTIVVGLAKSAAILRDRWTCKWCGTHTSVTRAVPNATFALNRRSRSRLRRIA*
Ga0137363_1100232023300012202Vadose Zone SoilMDRADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWACKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137399_1026351443300012203Vadose Zone SoilDTESGLMDLVDRARGFLILHESADFCDDCLGKALGIRAEQARSIVEGLAKSPAILRDRWTCKSCRQGTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137399_1028249533300012203Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARPIGEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRSRLGRTA*
Ga0137399_1157110523300012203Vadose Zone SoilRLADTESGLMDLADRARGFLILHESADFCDDCLGKALGIPAEQARSIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137387_1006873943300012349Vadose Zone SoilMDPADRARGFLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNATFALNRRS
Ga0137361_1041229833300012362Vadose Zone SoilADFCDDCLGKALGITPEEARTIVVGLAKSPAILRDRWTCKSCRQRTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0134057_111180213300012396Grasslands SoilRARGFLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNATFALNRRSRGRLGRLA*
Ga0137358_1011267423300012582Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWACKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137397_1011340313300012685Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGIAAEQARSIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVSNATFALGRRSRNRLGRTA*
Ga0137397_1108373613300012685Vadose Zone SoilMDLVDRARGFLILHESADFCDDCLGKALGIRAEQARSIVEGLAKSPAILRDRWTCKSCRQGTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137396_1016290423300012918Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQASSIVVDLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137396_1065890513300012918Vadose Zone SoilMDLVDRARGFLILHESADFCDDCLGKALGITAEQARPIGEGLAKSPAILRDRWTCRYCRQHTMVTRAVPNATLALGRRSRNRLGRTA*
Ga0137394_1042995423300012922Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGIAAEQARSIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137394_1111968013300012922Vadose Zone SoilMDLIGRAKGFLILHESADFCDDCLAKALGITATQARVVVAGLAKSAAILRDYWTCKSCRRQAEVTRAIPNATFALGRRSRNRLGRTA*
Ga0137359_1005159823300012923Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARKIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137419_1006822823300012925Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGIPAEQARSIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137404_1016384713300012929Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARKIVEGLAKSPAILRDRWACKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137404_1022384443300012929Vadose Zone SoilLVGRARGFLILHEGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRRHLLVTRAIPSLTFALSRRSRSRLRRTA*
Ga0137404_1024789023300012929Vadose Zone SoilMDLVARAKGFLILHESADICDDCLGRALGITAAEARTVVATIAKSSAILRDRWTCKSCRKHALVTRAIPNATFALSRRSRSRLGRIV*
Ga0137407_1167580223300012930Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGITGEQARSIVVGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA*
Ga0137410_1188018823300012944Vadose Zone SoilFLILHESADFCDDCLAKALGITATQARVVVAGLAKSAAILRDYWTCKSCRRQAEVTRAIPNATFALGRRSRNRLGRTA*
Ga0134110_1023357623300012975Grasslands SoilDLAARARGFLILHEGADFCDDCLARALGVDAAQARATLTTLAKSPAILRDRWTCKSCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0134075_1000059263300014154Grasslands SoilMDLVGCARGFLILHEGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRRHLLVTRAIPSLTFALSRRSRSRLRRTA*
Ga0137403_1000271453300015264Vadose Zone SoilMDLVARAKGFLILHESADFCDDCLGRALGITAAEARTVVATIAKSSAILRDRWTCKSCRKHALVTRAIPNATFALSRRSRSRLGRIV*
Ga0137403_1026320443300015264Vadose Zone SoilSAVMGLVGRARGFLFLHAGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRRHLLVTRAIPSLTFALSRRSRSRLRRTA*
Ga0134073_1032250513300015356Grasslands SoilRARPECKRGRVTRLADTQPGLMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA*
Ga0134072_1005148123300015357Grasslands SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQARATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA*
Ga0134112_1001042643300017656Grasslands SoilMTSAVMDLVGCARGFLILHEGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRRHQLVTRAIPNLTFALSRRSRSRLRRTA
Ga0066655_1004435123300018431Grasslands SoilMDPADRARGFLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNATFALNRRSRGRLGRLA
Ga0066655_1006888933300018431Grasslands SoilMDLAARAKGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0066667_1003123843300018433Grasslands SoilLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRKHALVTRAIPNATFALNRRSRGRLGRLA
Ga0066667_1084735323300018433Grasslands SoilQARPRHTLCWYRAGLMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA
Ga0066662_1023799033300018468Grasslands SoilMDLIGRAKGFLILHEGADFCDDCLAKALGITAMHARMVVAGLAKSAAILRDYWTCKSCRRQAEVTRAIPNATFALGRRSRNRLGRTA
Ga0066662_1049057623300018468Grasslands SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0066669_1010159423300018482Grasslands SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0066669_1037749233300018482Grasslands SoilMDLADRARGFLILHESADFCDDCLGKALGITAEEARTTVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0179594_1000926143300020170Vadose Zone SoilMTSAVMGLVGRARGFLILHEGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRRHLLVTRAIPSLTFALSRRSRSRLRRTA
Ga0179594_1013820013300020170Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGRTA
Ga0179592_1015530423300020199Vadose Zone SoilMDLVDRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQGTMVTRAVPNATFALGRRSRNRLGRTA
Ga0137417_117219233300024330Vadose Zone SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQASSIVVDLAKSPAILRDRWTCKSCRQHTMVTRAVPNA
Ga0137417_125979733300024330Vadose Zone SoilMDLVDRARGFLILHESADFCDDCLGKALGIRAEQARSIVEGLAKSPAILRDRWTCKSCRQGTMVTRAVPNATFALGRRSRNRLGRTA
Ga0207684_1155243813300025910Corn, Switchgrass And Miscanthus RhizosphereMDHAARAKGFLILHEGADFCDECLGKALGVSAAEALTIVAVLAKSAGILRDRWACKTCRKHTFVTRAIPNATFALNRR
Ga0207665_1028223913300025939Corn, Switchgrass And Miscanthus RhizosphereLILHESADFCDDCLGKALGIAADQARSIAVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0209234_100578843300026295Grasslands SoilMDLADRARGFLILHESADFCDDCLGKALGITGEQARSIVVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0209234_114761913300026295Grasslands SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTTVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0209238_115924423300026301Grasslands SoilDDCLGKALGITAEQARTTVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0209468_107865423300026306SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFAL
Ga0209468_116147413300026306SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHAMVTRAVPNATFALGRRSRNRLGR
Ga0209153_109076733300026312SoilAARARGFLILHEGADFCDDCLARALGVDAAQARATLTTLAKSPAILRDRWTCKSCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0209155_100522363300026316SoilMDLAARAKGFLILHEGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0209057_106982423300026342SoilMDLAARARGFLILREGADFCDDCLARALGVDAAQVRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0209159_106024843300026343SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRR
Ga0209059_113953033300026527SoilRGFLILHESADFCDDCLGKALGITAEQARTTVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0209378_100009493300026528SoilMDPADRARGFLILHESADFCDDCLGRALGITAAEARTIVASLAKSSAILRDRWTCKSCRTHALVTRAIPNATFALNRRSRGRLGRLA
Ga0209157_102835833300026537SoilMDLVGCARGFLILHEGADFCDECLGRALGISTAQVRMAVATLAKSAAILRDRWTCKSCRRHQLVTRAIPNLTFALSRRSRSRLRRTA
Ga0209376_112863423300026540SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQARATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0209805_109514733300026542SoilMDLAARARGFLILHEGADFCDDCLARALGVDAAQIRATLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0209805_123238913300026542SoilRGTRLADTQPGLMDLADRARGFLILHESADFCDDCLGKALGITGEQARSIVVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0209161_1013632643300026548SoilLLLHEPAMDLAARARGFLILHEGADFCDDCLARALGVDAAQARETLTTLAKSPAILRDRWTCKFCRRSTLVSRAIANPTFALNRRSRTRLRRTA
Ga0209474_1007881113300026550SoilRGFLILHESADFCDDCLGKALGITAEQARTIVEGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0209648_1003184853300026551Grasslands SoilMDLADRARGFLILHESADFCDDCLGKALGITAEQARTIVGGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALGRRSRNRLGRTA
Ga0209177_1006480313300027775Agricultural SoilMNLADRARGFLILHESADFCDECLAKALGTTPAQAHSVVVSLSKSAAILRDRWTCSVCRRHAYVTRAIPNATFALNRRSRGRLGRIA
Ga0137415_10002729193300028536Vadose Zone SoilMDLVDRARGFLILHESADFCDDCLGKALGITAEQARSIVEGLAKSPAILRDRWTCKSCRQGTMVTRAVPNATFALGRRSRNRLGRTA
Ga0137415_1053105933300028536Vadose Zone SoilQSGLMDLADRARGFLILHESADFCDDCLGKALGITGEQARSIVVGLAKSPAILRDRWTCKSCRQDTMVTRAVPNATFALGRRSRNRLGRTA
Ga0307473_1067760223300031820Hardwood Forest SoilRLADTQPGLMDLADRARGFLILHESADFCDSCLGKALGITAEQARTIVVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALSRRSRNRLGRTA
Ga0307471_10000326983300032180Hardwood Forest SoilMDLADRARGFLILHESADFCDSCLGKALGITAEQARTIVVGLAKSPAILRDRWTCKSCRQHTMVTRAVPNATFALSRRSRNRLGRTA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.