NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F081605

Metagenome / Metatranscriptome Family F081605

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F081605
Family Type Metagenome / Metatranscriptome
Number of Sequences 114
Average Sequence Length 60 residues
Representative Sequence DRSVEMNRIPDLMRTFLTQMAREFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY
Number of Associated Samples 102
Number of Associated Scaffolds 114

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 8.77 %
% of genes near scaffold ends (potentially truncated) 92.11 %
% of genes from short scaffolds (< 2000 bps) 94.74 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.123 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.649 % of family members)
Environment Ontology (ENVO) Unclassified
(30.702 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.737 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.22%    β-sheet: 20.22%    Coil/Unstructured: 59.55%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
e.7.1.0: Carbohydrate phosphatased2pcrb_2pcr0.71
d.283.1.0: Putative modulator of DNA gyrase, PmbA/TldDd5njcb_5njc0.71
c.51.4.2: ITPase-liked2amha12amh0.68
c.72.1.1: Ribokinase-liked2absa12abs0.67
e.7.1.0: Carbohydrate phosphatased5zhha_5zhh0.67

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 114 Family Scaffolds
PF12200DUF3597 15.79
PF01699Na_Ca_ex 0.88
PF06831H2TH 0.88
PF13565HTH_32 0.88
PF09557DUF2382 0.88
PF04828GFA 0.88
PF01268FTHFS 0.88
PF01797Y1_Tnp 0.88
PF03350UPF0114 0.88
PF00691OmpA 0.88
PF07332Phage_holin_3_6 0.88
PF09383NIL 0.88
PF01578Cytochrom_C_asm 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 114 Family Scaffolds
COG0266Formamidopyrimidine-DNA glycosylaseReplication, recombination and repair [L] 0.88
COG0387Cation (Ca2+/Na+/K+)/H+ antiporter ChaAInorganic ion transport and metabolism [P] 0.88
COG0530Ca2+/Na+ antiporterInorganic ion transport and metabolism [P] 0.88
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.88
COG2759Formyltetrahydrofolate synthetaseNucleotide transport and metabolism [F] 0.88
COG2862Uncharacterized membrane protein YqhAFunction unknown [S] 0.88
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.12 %
UnclassifiedrootN/A0.88 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_17295506All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia9939Open in IMG/M
2228664021|ICCgaii200_c0842051All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300000881|JGI10215J12807_1309827All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300004030|Ga0055444_10128795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria901Open in IMG/M
3300004479|Ga0062595_100204303All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300004635|Ga0062388_102263626All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300005175|Ga0066673_10241097All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300005175|Ga0066673_10268102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria991Open in IMG/M
3300005295|Ga0065707_10547882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria723Open in IMG/M
3300005331|Ga0070670_101263858All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300005338|Ga0068868_100948403All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300005338|Ga0068868_102431506All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005364|Ga0070673_101210013All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005365|Ga0070688_101721910All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300005439|Ga0070711_100677741All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300005440|Ga0070705_100110979All Organisms → cellular organisms → Bacteria1752Open in IMG/M
3300005445|Ga0070708_100190742All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1917Open in IMG/M
3300005543|Ga0070672_102178301All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300005547|Ga0070693_101500984All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia527Open in IMG/M
3300005602|Ga0070762_11207395All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005713|Ga0066905_101845308All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300005764|Ga0066903_103889827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria802Open in IMG/M
3300005937|Ga0081455_10857526All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300005937|Ga0081455_10865525All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300005983|Ga0081540_1114459All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300006058|Ga0075432_10268322All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300006175|Ga0070712_100915090All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300006176|Ga0070765_101298641All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300006796|Ga0066665_10655477All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300006904|Ga0075424_100453438All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300006904|Ga0075424_101465112All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300009098|Ga0105245_12009464All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300009148|Ga0105243_10438419All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300009156|Ga0111538_10451910All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300010036|Ga0126305_10380548All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300010043|Ga0126380_11428936All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300010325|Ga0134064_10491338All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium508Open in IMG/M
3300010326|Ga0134065_10056029All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300010399|Ga0134127_10360459All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300010400|Ga0134122_10692853All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300011332|Ga0126317_11100295All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300012091|Ga0136625_1306384All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300012198|Ga0137364_10336285All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300012211|Ga0137377_10388594All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium1333Open in IMG/M
3300012212|Ga0150985_105569967All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300012212|Ga0150985_122363893All Organisms → cellular organisms → Bacteria3162Open in IMG/M
3300012357|Ga0137384_10094642All Organisms → cellular organisms → Bacteria2490Open in IMG/M
3300012469|Ga0150984_119682283All Organisms → cellular organisms → Bacteria1424Open in IMG/M
3300012469|Ga0150984_119913457All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia963Open in IMG/M
3300012685|Ga0137397_10166753All Organisms → cellular organisms → Bacteria1634Open in IMG/M
3300012922|Ga0137394_11391163All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300012948|Ga0126375_10318710All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300012957|Ga0164303_11234172All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300012971|Ga0126369_13374990All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300012977|Ga0134087_10175511All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium947Open in IMG/M
3300012984|Ga0164309_10517990All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300012986|Ga0164304_10396912All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300013100|Ga0157373_11344427All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300013296|Ga0157374_10005143All Organisms → cellular organisms → Bacteria → Proteobacteria10969Open in IMG/M
3300013308|Ga0157375_12428627All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300015077|Ga0173483_10774232All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300015085|Ga0167632_1030203All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300015372|Ga0132256_100253401All Organisms → cellular organisms → Bacteria1830Open in IMG/M
3300015373|Ga0132257_101917570All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300015374|Ga0132255_100174045All Organisms → cellular organisms → Bacteria3025Open in IMG/M
3300016387|Ga0182040_10594402All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia895Open in IMG/M
3300016387|Ga0182040_11086572All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300018000|Ga0184604_10028694All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300018051|Ga0184620_10035195All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300018433|Ga0066667_10341994All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300018482|Ga0066669_10901787All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia791Open in IMG/M
3300019356|Ga0173481_10220638All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium835Open in IMG/M
3300019877|Ga0193722_1004161All Organisms → cellular organisms → Bacteria3572Open in IMG/M
3300019877|Ga0193722_1041544All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300020006|Ga0193735_1046172All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium1304Open in IMG/M
3300020580|Ga0210403_11202647All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300021560|Ga0126371_10929397All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300022467|Ga0224712_10105209All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300022756|Ga0222622_11176607All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300025903|Ga0207680_10782834All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300025916|Ga0207663_10206463All Organisms → cellular organisms → Bacteria1421Open in IMG/M
3300025920|Ga0207649_11233685All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia591Open in IMG/M
3300025927|Ga0207687_11783709All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300025929|Ga0207664_11434660All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300025945|Ga0207679_11978198All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300025972|Ga0207668_10670756All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300025986|Ga0207658_10518493All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium1064Open in IMG/M
3300025986|Ga0207658_12011367All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia526Open in IMG/M
3300026023|Ga0207677_11167036Not Available704Open in IMG/M
3300026121|Ga0207683_11156515All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300026312|Ga0209153_1063402All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1332Open in IMG/M
3300026312|Ga0209153_1245947All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300026943|Ga0207486_1019166All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300027876|Ga0209974_10260962All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300027907|Ga0207428_11267935All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300028379|Ga0268266_10351241All Organisms → cellular organisms → Bacteria1386Open in IMG/M
3300028589|Ga0247818_10499894All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300028814|Ga0307302_10458226All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300028828|Ga0307312_11107540All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300028889|Ga0247827_11187811All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium528Open in IMG/M
3300028906|Ga0308309_11341869All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300031184|Ga0307499_10178363All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300031668|Ga0318542_10760515All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300031720|Ga0307469_10413385All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300031879|Ga0306919_10937361All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300031890|Ga0306925_10951481All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300031890|Ga0306925_11173642All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300031890|Ga0306925_12234029All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300031941|Ga0310912_10429305All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300032035|Ga0310911_10507401All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300032164|Ga0315283_10246546All Organisms → cellular organisms → Bacteria1931Open in IMG/M
3300032205|Ga0307472_100393253All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300032397|Ga0315287_12350362All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300034175|Ga0334939_0047187All Organisms → cellular organisms → Bacteria1359Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.26%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.39%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.39%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.51%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.51%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.63%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere2.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.63%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.63%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.75%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.75%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.75%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.75%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.75%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.75%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.75%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.75%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.75%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.75%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.75%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.88%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.88%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.88%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.88%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.88%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.88%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.88%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.88%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.88%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.88%
BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust0.88%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.88%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.88%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300004030Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012091Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015085Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4B, Ice margin, adjacent to proglacial lake)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026943Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A3-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300034175Biocrust microbial communities from Mojave Desert, California, United States - 35SMCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_001559702088090014SoilPDQDLTVIAYTPSDPPQKVGTARLDARTKQMAYLPEY
ICCgaii200_084205112228664021SoilDRTVEMNRIPDLMRTLLTQMAREFPQQDLTVIAYTPSNPPLKVGTARLDSRTNEMNYVPE
JGI10215J12807_130982713300000881SoilEMNRIPDLMRTLLTQMAREFPEQDLTVIAYTPSSPPQKVGTAHLDSRTKEMNYLPEY*
Ga0055444_1012879513300004030Natural And Restored WetlandsVEMETIPALMKTMLTEMSKEFPGQDLTVIAYAPSNPPMKIGTARLDAQTREITYIAE*
Ga0062595_10020430313300004479SoilTMLTQMAREFPGQDLTVIAYTPSNPPQKVGTAYLNSRTKEMNYVPEY*
Ga0062388_10226362623300004635Bog Forest SoilSVEMDKISALMRSMLVQMAREFPNQDLTVLAYTPSNPPRKIGTARLNARTRDMTYTPEY*
Ga0066673_1024109733300005175SoilIILDGDVGMDRIPDLMRTMLTEMAREFPGQNLIVLAYAPSNPPRKVGTAHLDSRTREMNYLPEN*
Ga0066673_1026810233300005175SoilQNELGLILDRTVEMDRVPDLMRSILTQMARAFPGQDLTVLAYTPSDPPHKIGTARLNAQTRDMSYTPEQ*
Ga0065707_1054788213300005295Switchgrass RhizosphereGLILDRSVEMNRIPDLMRTLLTQMAREFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0070670_10126385813300005331Switchgrass RhizosphereILDRSVEMDKIPNLMRTMLAQMAKEFPGQDLTVIAYTPSNPPHKIGTARLNARTRDMVYTPEA*HPTRALSLGKNH*
Ga0068868_10094840313300005338Miscanthus RhizosphereMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0068868_10243150613300005338Miscanthus RhizosphereLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0070673_10121001313300005364Switchgrass RhizosphereVEMDKIPTLMRTMLTQMAKEFPGENLTVLAYTPSDPPHKIGTAHLNAQTRDMTYTPEK*
Ga0070688_10172191013300005365Switchgrass RhizosphereTIDRALLNEQNELGLILDRSVEMDKIPTLMRTMLTQMAKEFPGENLTVLAYTPSDPPHKIGTAHLNAQTRDMTYTPEK*
Ga0070711_10067774123300005439Corn, Switchgrass And Miscanthus RhizosphereILDRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0070705_10011097913300005440Corn, Switchgrass And Miscanthus RhizosphereVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0070708_10019074213300005445Corn, Switchgrass And Miscanthus RhizosphereIPAVMRTVITQMAREFPGQDLTVLAYTPSNPPRKIGTARLNARTRDMT*
Ga0070672_10217830113300005543Miscanthus RhizosphereNEQNELGLILDRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0070693_10150098413300005547Corn, Switchgrass And Miscanthus RhizosphereMLNEQNELGLILDRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMN
Ga0070762_1120739523300005602SoilSVEMDKISALMRSMLVQMAHEFPNQDLTIFAYAPSNPPSKIGTARLNARTRDMTYTPEH*
Ga0066905_10184530823300005713Tropical Forest SoilKIPDLMRTMLEQMGREFPNQDLTVLAYTPSNPPQKIGTAHLDARTRAMTYVPAQ*
Ga0066903_10388982713300005764Tropical Forest SoilVIDRAVLNERNELGLVLDRTVEMNRIPELMRTFLTQMAREFPGQDLTVIAYAPSEPPQKVGTGYLDAQSKEMKYVPEY*
Ga0081455_1085752613300005937Tabebuia Heterophylla RhizosphereILDRSVELSKIPDLMRTMLTQMAREFPGQDLTVIAYSPSNPPRKVGAAYLNSRTKEMNYVPEY*
Ga0081455_1086552513300005937Tabebuia Heterophylla RhizosphereLILDRSVEMQKIPDLMRTMLEQMALEFPNQDLTVLAYAPSNPPQKIGTAHLDARTRAMTYVPTQ*
Ga0081540_111445933300005983Tabebuia Heterophylla RhizosphereVVLNRGVELDKISALMRSILVQMARAFPGQDLTVLAYAPSNPPRKIGTARLNARTRDMTYTPER*
Ga0075432_1026832223300006058Populus RhizosphereIPDLMRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY*
Ga0070712_10091509013300006175Corn, Switchgrass And Miscanthus RhizosphereRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY
Ga0070765_10129864123300006176SoilILNRSVEMDKISALMRSMLVQMAHEFPNQDLTIFAYAPSNPPSKIGTARLNARTRDMTYTPEH*
Ga0066665_1065547723300006796SoilLDRTVEMGKVPELMRTILGQMAREFPGQDLTILAYTPSNPPHKIGTARLDAQTREMNYTPAQ*
Ga0075424_10045343813300006904Populus RhizosphereRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY*
Ga0075424_10146511213300006904Populus RhizosphereRAMLNERNELGLILDRNVEMNRIPDLMRTFLTQMASEFPGQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLAEY*
Ga0105245_1200946423300009098Miscanthus RhizosphereMRTFLTQMASEFPGQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLAEY*
Ga0105243_1043841913300009148Miscanthus RhizospherePDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0111538_1045191013300009156Populus RhizosphereSVEMNRIPDLMRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY*
Ga0126305_1038054813300010036Serpentine SoilLLNERNELGLVLDRSVEMDKIPALLRSMLTEMAREFPGEDLTVIAYAPSEPPRKIGTARLNAQTREMSYTAEH*
Ga0126380_1142893613300010043Tropical Forest SoilLSRIPDLMRTMLTQMAREFPDQDLTVIAYTPSNPPRKVGSAYLNSRTKEMNYVPEY*
Ga0134064_1049133823300010325Grasslands SoilGLILDRTVEMDRVPDLMRSILTQMARAFPGQDLTVLAYTPSDPPHKIGTARLNAQTRDMSYTPEQ*
Ga0134065_1005602913300010326Grasslands SoilKVPELMRTILGQMAREFPGQDLTILAYTPSNPPHKIGTARLDAQTREMNYTPAQ*
Ga0134127_1036045933300010399Terrestrial SoilRAMLNEQNELGLILDRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0134122_1069285313300010400Terrestrial SoilRTFLTQMAREFPEQDLTVIAYTPSSPPQKVGTAHLDSRTKEMNYLPEY*
Ga0126317_1110029513300011332SoilLILDQRVEMDSIPALMKSILTGMAKEFPGQDLTVIAYTPSSPPRKIGTANLNARTRDMTYTAAVQ*
Ga0136625_130638423300012091Polar Desert SandLLNEQNELGLILDRRVEMDKIPDLMRTMLGQMAREFPDQDLTVLAYTPSEPPRKIGTAHLNARTRDMTYTPER*
Ga0137364_1033628533300012198Vadose Zone SoilQNELGLILDRTVEMDKVPELMRTILGQMAREFPGQDLTILPYTPSNPPHKIGTAQLDAQTREMNYTPAQ*
Ga0137377_1038859443300012211Vadose Zone SoilMDKVPELMRTILGQMAREFPGQDLTILAYTPSNPPHKIGTARLDPQTREMNYTPAQ*
Ga0150985_10556996713300012212Avena Fatua RhizosphereEMDKIPALMKTMLVQMAKEFPGEDLTVIAYAPSEPPRKIGTARLNAATRDMTYTPENS*
Ga0150985_12236389333300012212Avena Fatua RhizosphereVLNEKNELGLILNRNVQMDSIAPLMRSMLTQMATEFPGQDLTIIAYAPSQPPIRIGTGHLDARTRAMTYTPENGGKNH*
Ga0137384_1009464213300012357Vadose Zone SoilLGLILDRTVEMDKVPELMRTILGQMAREFPGQDLTILAYTPSNPPHKIGTARLDPQTREMNYTPAQ*
Ga0150984_11968228333300012469Avena Fatua RhizosphereSVEMDKIPALMKTMLVQMAKEFPGEDLTVIAYAPSEPPRKIGTARLNAATRDMTYTPENS
Ga0150984_11991345723300012469Avena Fatua RhizosphereMLNEQNELGLILDLSVEMNRIPDLMRTFLTQMAREFPEQDLTVIAYTPSTPPQKVGTAHLDSRTKEMNYLPEY*
Ga0137397_1016675313300012685Vadose Zone SoilEQDLTVIAYTPSSPPQKVGTGHLDSRTKEMNYLPEY*
Ga0137394_1139116323300012922Vadose Zone SoilGIILDSNVGMDRIPDLMRMMLTEMAREFPDQDLTVLAYTPSNPPRKIGTAHLDGRTREMSYVPEN*
Ga0126375_1031871013300012948Tropical Forest SoilPDLMRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY*
Ga0164303_1123417223300012957SoilNRIPDLMRTMLTQMAREFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVHEY*
Ga0126369_1337499013300012971Tropical Forest SoilQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY*
Ga0134087_1017551113300012977Grasslands SoilDRAMLNEQNELGLILDRTVEMDRVPDLMRSILTQMARAFPGQDLTVLAYTPSDPPHKIGTARLNAQTRDMSYTPEQ*
Ga0164309_1051799013300012984SoilELGLILDRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLAEY*
Ga0164304_1039691213300012986SoilEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY*
Ga0157373_1134442723300013100Corn RhizosphereDRSVEMNRIPDLMRTFLTQMAREFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY*
Ga0157374_1000514313300013296Miscanthus RhizosphereINEQNELGLILDRSVEMQKIPDLMRTMLEQMAREFPNHDLTVLAYTPSNPPQKIGTAHLDARTRAMTYVPSQ*
Ga0157375_1242862713300013308Miscanthus RhizosphereNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLAEY*
Ga0173483_1077423213300015077SoilNELGLILDRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSSPPQKVGTAHLDSRTKEMNYLPEY*
Ga0167632_103020323300015085Glacier Forefield SoilRSVEMNKIPDLMRGMLTQMAREFPGQDLTVLAYAPSQPPRKIGTAHLNAKTRDMSYTPER
Ga0132256_10025340143300015372Arabidopsis RhizosphereMLTQMAREFPGQDLTVIAYTPSNPPQKVGTAYLNSRTKEMNYVPEY*
Ga0132257_10191757013300015373Arabidopsis RhizosphereILDRSVEMQKIPDLMRTMLEQMAKEFPDQDLTVLAYAPSNPPQKIGTARLDARTRAMTYVPAQ*
Ga0132255_10017404563300015374Arabidopsis RhizosphereMLNERNELGLILDRNVEMNRIPDLMRTFLTQMASEFPGQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLAEY*
Ga0182040_1059440223300016387SoilMDKIPALMHSMLVQMARAFPGQDLTILAYAPSNPPRKIGTARL
Ga0182040_1108657223300016387SoilPDLMRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY
Ga0184604_1002869433300018000Groundwater SedimentVEMNRIPDLMRTLLTQMAREFPEQDLTVIAYTPSEPPQKVGTAHLDSRTKEMNYLPEY
Ga0184620_1003519513300018051Groundwater SedimentLGLILDRSVEMNRIPDLMRTLLTQMAREFPEQDLTVIAYTPSEPPQKVGTAHLDSRTKEMNYLPEY
Ga0066667_1034199433300018433Grasslands SoilLGLILDRTVEMDKVPELMRTILGQMAREFPGQDLTVLAYAPSNPPHKIGTARLDAQTREMNYTPAQ
Ga0066669_1090178713300018482Grasslands SoilMLNEQNELGIILDGDVGMDRIPDLMRTMLTEMAREFPGQNLIVLAYAPSNPPRKVGTAHLDSRTREMNYLPEN
Ga0173481_1022063823300019356SoilVEMDKVPDLMRTILGQMAREFPGQDLTVLAYTPSNRPHKIGTAKLNAQTRDMTYTPTQ
Ga0193722_100416113300019877SoilEQNELGLILDRSVEMNRIPDLMRTLLTQMAREFPEQDLTVIAYTPSSPPQKVGTAHLDSRTKEMNYLPEY
Ga0193722_104154433300019877SoilRTLLTQMAREFPEQDLTVIAYTPSSPPQKVGTAHLDSRTKEMNYLPEY
Ga0193735_104617223300020006SoilMNRIPDLMRTLLTQMAREFPEQDLTVIAYTPSSPPQKVGTAHLDSRTKEMNYLSEY
Ga0210403_1120264713300020580SoilTQMAREFPEQDLTVIAYTPSSPPQKVGTAHLDSRTKDMNYLPEY
Ga0126371_1092939733300021560Tropical Forest SoilLGLILDRSVEMNRIPDLMRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY
Ga0224712_1010520913300022467Corn, Switchgrass And Miscanthus RhizosphereVVLGRSVSMDSIPQLLKGLLIQEAKFFPGEDLTIHAYAPANPPIKIGTAHLNARTRNMTYTPTRR
Ga0222622_1117660723300022756Groundwater SedimentNVGMDRIPDLMRMMLTEMAREFPGQDLTVLAYTPSNPPRKIGTAHLDGRTREMNYVSEN
Ga0207680_1078283413300025903Switchgrass RhizosphereRTLLTQMAREFPEQDLTVIAYTPSSPPQKVGTAHLYSRTKEMNYLPEY
Ga0207663_1020646313300025916Corn, Switchgrass And Miscanthus RhizosphereIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY
Ga0207649_1123368523300025920Corn RhizosphereMLNEQNELGLILDRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSSPPQKVGTAHLYSRTKEMNYLPEY
Ga0207687_1178370913300025927Miscanthus RhizosphereLDRNVEMNRIPDLMRTFLTQMASEFPGQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY
Ga0207664_1143466013300025929Agricultural SoilQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY
Ga0207679_1197819813300025945Corn RhizosphereTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY
Ga0207668_1067075623300025972Switchgrass RhizosphereLILDRSVEMQKIPDLMRTMLAQMAQEFPNQDLTVLAYTPSNPPQKIGTAHLDARTRAMTYVPAQ
Ga0207658_1051849333300025986Switchgrass RhizosphereMDKIPTLMRTMLAQMAKEFPGQDLTVIAYAPMNPPRKIGTARLNAQTRDMT
Ga0207658_1201136713300025986Switchgrass RhizosphereLVLDRKVEMAKIPDLMRSILTQMAREFPGQDLTVIAYAPSTPPQKIGTARLKAQSGEMNYTPEK
Ga0207677_1116703613300026023Miscanthus RhizosphereEQNELGLILDRSVEMNRIPDLMRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY
Ga0207683_1115651523300026121Miscanthus RhizosphereQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY
Ga0209153_106340233300026312SoilMLNEQNELGLILDRTVEMDRVPDLMRSILTQMARAFPGQDLTVLAYTPSDPPHKIGTARL
Ga0209153_124594723300026312SoilTIDRAMLNDQNELGLILDRTVEMDRVPDLMRSILTQMAREFPGEDLTVLAYTPSNPPHKIGTARLNAQTRDMSYTPTQ
Ga0207486_101916623300026943SoilMRTLLARMAREFPEQDLTVIAYTPSSPPQKVGTAHLDSRTKEMNYLPEY
Ga0209974_1026096213300027876Arabidopsis Thaliana RhizosphereDRNVEMNRIPDLMRTMLTQMAREFPDQDLTVLAYAPSNPPRKIGTARLDGRTREMSYVPE
Ga0207428_1126793513300027907Populus RhizosphereLILDRNVEMNRIPDLMRTFLTQMASEFPGQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLAEY
Ga0268266_1035124143300028379Switchgrass RhizosphereIDRAMLNEQNELGLILDRNVEMNRIPDLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY
Ga0247818_1049989423300028589SoilNVEMDRIPDLMRMMLTEMAREFPGQDLTVLAYAPSNPPRKIGTAHLDGQTREMSYVPEN
Ga0307302_1045822623300028814SoilRIPDLMRMMLTEMAREFPGQDLTVLAYTPSNPPRKIGTAHLDGQTREMSYVPEK
Ga0307312_1110754013300028828SoilRSVEMDKIPDLMRSMLTEMAREFPGQDLTVLAYAPSAPPQKIGTARFNARTRDMTFTPEH
Ga0247827_1118781113300028889SoilLILDRNVEMQKIPDLMRTMLEQMAREFPNQDLTVLAYTPSNPPQKIGTAHLDARTRAMTYVPTQ
Ga0308309_1134186923300028906SoilILNRSVEMDKISALMRSMLVQMAHEFPNQDLTIFAYAPSNPPSKIGTARLNARTRDMTYTPEH
Ga0307499_1017836313300031184SoilLTQMAREFPEQDLTVIAYTPSEPPQKVGTAHLDSRTKEMNYLAEY
Ga0318542_1076051513300031668SoilVFNEQNELGLILNRSVEMDKIPGLMRSMLVQMARAFPGQDLTILAYAPSNPPRKIGTARLNARTRDMTYTPER
Ga0307469_1041338533300031720Hardwood Forest SoilLMRTFLTQMASEFPEQDLTVIAYTPSNPPLKVGTAHLDSRTKEMNYLPEY
Ga0306919_1093736113300031879SoilPVRRPADDGNIGMDRIPDLMRMMPTEMAREFPGQDLTVLAYAPSNPPRKIGTARLDGRTREMSYVTEK
Ga0306925_1095148113300031890SoilGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY
Ga0306925_1117364213300031890SoilMDKIPAMMRSMLVQMARAFPGQDLTILAYAPSNPPRKIGTAQLNARTRDMTYTPER
Ga0306925_1223402923300031890SoilKVEMDKIPSLMRSMLIQMARAFPGQDLTILGYAPSSPPRKIGTARLNARTRDMTYTPER
Ga0310912_1042930513300031941SoilLILDRSVEMNRIPDLMRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY
Ga0310911_1050740113300032035SoilNRIPDLMRTMLTQMAGEFPGQDLTVIAYTPSNPPRKVGTAYLNSRTKEMNYVPEY
Ga0315283_1024654653300032164SedimentNEQNELGLILDRSVEIEKIPDLMRVMLTQMAGEFPGQDLTVLAYTPSNPPRKIGTAHLNAQTRDMSYVPER
Ga0307472_10039325323300032205Hardwood Forest SoilMDKIPSLMRSMLVQMARAFPGRDLTVLAYTPSNPPRKIATARLNARTRDMTYTPER
Ga0315287_1235036213300032397SedimentGLILDRSVEMEKIPDLMRVMLTQMAGEFPGQDLTVLAYTPSNPPRKIGTAHLNAQTRDMSYVPER
Ga0334939_0047187_38_2083300034175BiocrustMDKIPDLMRSMLTEMASDFPGQNLTALAYAPTEPPRKIATARLNAETRDMSYTPEQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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