Metagenome / Metatranscriptome Family F081562

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081562
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	71 residues
Representative Sequence	MSAGQAAPVVRRPDQVPAGSLAPGVTAAEMLNDQHGCRGLHQRRLRLAGHAELAGTAEGRGEAWYVIGGSG
Number of Associated Samples	96
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.14 %
% of genes near scaffold ends (potentially truncated)	93.86 %
% of genes from short scaffolds (< 2000 bps)	89.47 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.053 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.860 % of family members)
Environment Ontology (ENVO)	Unclassified (37.719 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (45.614 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.06% β-sheet: 25.25% Coil/Unstructured: 68.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF03976	PPK2	74.56
PF07969	Amidohydro_3	6.14
PF07883	Cupin_2	0.88
PF00296	Bac_luciferase	0.88
PF00743	FMO-like	0.88
PF13738	Pyr_redox_3	0.88
PF01255	Prenyltransf	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	74.56
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.88
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.05 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.05 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.05 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.86 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.86 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.33 %
Unclassified	root	N/A	28.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.95 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	10.53 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	4.39 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.88 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.95 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	10.53 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples	4.39 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	10.53 %
uncultured Frankineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	4.39 %
Oryzihumus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.95 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	10.53 %
uncultured Frankineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	4.39 %
Oryzihumus leptocrescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	0.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10048495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2561	Open in IMG/M
3300003505\|JGIcombinedJ51221_10413338	Not Available	547	Open in IMG/M
3300003505\|JGIcombinedJ51221_10421811	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005538\|Ga0070731_10268484	Not Available	1133	Open in IMG/M
3300005538\|Ga0070731_10345860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	987	Open in IMG/M
3300005541\|Ga0070733_11108861	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005610\|Ga0070763_10752444	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300006059\|Ga0075017_101401756	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006176\|Ga0070765_101596107	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300009523\|Ga0116221_1095289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1320	Open in IMG/M
3300009683\|Ga0116224_10266443	Not Available	817	Open in IMG/M
3300010379\|Ga0136449_100594761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	1888	Open in IMG/M
3300010379\|Ga0136449_104323472	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300016404\|Ga0182037_10812768	Not Available	806	Open in IMG/M
3300016445\|Ga0182038_11599214	Not Available	586	Open in IMG/M
3300017821\|Ga0187812_1233496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	586	Open in IMG/M
3300017823\|Ga0187818_10092087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1310	Open in IMG/M
3300017924\|Ga0187820_1206892	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300017928\|Ga0187806_1158368	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300017928\|Ga0187806_1205395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	669	Open in IMG/M
3300017928\|Ga0187806_1249167	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300017932\|Ga0187814_10285215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	630	Open in IMG/M
3300017932\|Ga0187814_10377043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	550	Open in IMG/M
3300017942\|Ga0187808_10563808	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300017972\|Ga0187781_10455392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	916	Open in IMG/M
3300018058\|Ga0187766_11307869	Not Available	529	Open in IMG/M
3300018060\|Ga0187765_10395891	Not Available	852	Open in IMG/M
3300018085\|Ga0187772_10075281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2128	Open in IMG/M
3300018085\|Ga0187772_10922540	Not Available	635	Open in IMG/M
3300018090\|Ga0187770_11201006	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300021403\|Ga0210397_10922382	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300021406\|Ga0210386_10265719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1465	Open in IMG/M
3300021860\|Ga0213851_1068870	Not Available	699	Open in IMG/M
3300022522\|Ga0242659_1068430	Not Available	658	Open in IMG/M
3300022529\|Ga0242668_1032787	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300022557\|Ga0212123_10816899	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300022714\|Ga0242671_1067605	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300022717\|Ga0242661_1155495	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300024271\|Ga0224564_1138276	Not Available	502	Open in IMG/M
3300025134\|Ga0207416_1249329	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300026467\|Ga0257154_1013240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152	Open in IMG/M
3300026515\|Ga0257158_1065231	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300027030\|Ga0208240_1001679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2236	Open in IMG/M
3300027047\|Ga0208730_1004783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1335	Open in IMG/M
3300027064\|Ga0208724_1016296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	732	Open in IMG/M
3300027165\|Ga0208608_112815	Not Available	555	Open in IMG/M
3300027297\|Ga0208241_1022372	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300027635\|Ga0209625_1031012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1192	Open in IMG/M
3300027853\|Ga0209274_10032919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2410	Open in IMG/M
3300027869\|Ga0209579_10546103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → environmental samples → uncultured Frankineae bacterium	629	Open in IMG/M
3300028742\|Ga0302220_10347095	Not Available	536	Open in IMG/M
3300028806\|Ga0302221_10537013	Not Available	510	Open in IMG/M
3300028906\|Ga0308309_10381274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1206	Open in IMG/M
3300028906\|Ga0308309_11651707	Not Available	544	Open in IMG/M
3300029701\|Ga0222748_1118980	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300029943\|Ga0311340_10188765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2093	Open in IMG/M
3300029951\|Ga0311371_12317718	Not Available	554	Open in IMG/M
3300030532\|Ga0210290_1350556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	969	Open in IMG/M
3300030740\|Ga0265460_11040457	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300030741\|Ga0265459_13516065	Not Available	549	Open in IMG/M
3300030743\|Ga0265461_10777284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300031057\|Ga0170834_107520471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968	Open in IMG/M
3300031090\|Ga0265760_10031002	Not Available	1576	Open in IMG/M
3300031543\|Ga0318516_10349382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	853	Open in IMG/M
3300031564\|Ga0318573_10091285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1551	Open in IMG/M
3300031564\|Ga0318573_10267653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	912	Open in IMG/M
3300031564\|Ga0318573_10604399	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031572\|Ga0318515_10072845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1767	Open in IMG/M
3300031573\|Ga0310915_10472306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	891	Open in IMG/M
3300031573\|Ga0310915_10709170	Not Available	710	Open in IMG/M
3300031640\|Ga0318555_10016601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3384	Open in IMG/M
3300031682\|Ga0318560_10329950	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300031718\|Ga0307474_11484684	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300031723\|Ga0318493_10076740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1638	Open in IMG/M
3300031723\|Ga0318493_10292880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300031723\|Ga0318493_10337137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	818	Open in IMG/M
3300031724\|Ga0318500_10156911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1073	Open in IMG/M
3300031724\|Ga0318500_10232402	Not Available	890	Open in IMG/M
3300031747\|Ga0318502_11021763	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031769\|Ga0318526_10324427	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300031770\|Ga0318521_10195515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1166	Open in IMG/M
3300031793\|Ga0318548_10531493	Not Available	574	Open in IMG/M
3300031795\|Ga0318557_10058833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1635	Open in IMG/M
3300031796\|Ga0318576_10578033	Not Available	529	Open in IMG/M
3300031821\|Ga0318567_10620181	Not Available	614	Open in IMG/M
3300031831\|Ga0318564_10240992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	802	Open in IMG/M
3300031832\|Ga0318499_10255392	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300031859\|Ga0318527_10129572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1050	Open in IMG/M
3300031879\|Ga0306919_11193685	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031910\|Ga0306923_11079270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	866	Open in IMG/M
3300031945\|Ga0310913_11243979	Not Available	517	Open in IMG/M
3300031946\|Ga0310910_10814886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	735	Open in IMG/M
3300031954\|Ga0306926_11160153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	910	Open in IMG/M
3300031962\|Ga0307479_12120023	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300032008\|Ga0318562_10098387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1658	Open in IMG/M
3300032008\|Ga0318562_10099893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1646	Open in IMG/M
3300032008\|Ga0318562_10135098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1416	Open in IMG/M
3300032009\|Ga0318563_10673400	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300032010\|Ga0318569_10172890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	998	Open in IMG/M
3300032025\|Ga0318507_10509727	Not Available	523	Open in IMG/M
3300032055\|Ga0318575_10722621	Not Available	504	Open in IMG/M
3300032059\|Ga0318533_10560627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300032064\|Ga0318510_10520844	Not Available	516	Open in IMG/M
3300032066\|Ga0318514_10417707	Not Available	712	Open in IMG/M
3300032091\|Ga0318577_10026153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2482	Open in IMG/M
3300032180\|Ga0307471_101620674	Not Available	803	Open in IMG/M
3300032261\|Ga0306920_104187904	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300032805\|Ga0335078_10756539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1193	Open in IMG/M
3300032895\|Ga0335074_10225783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2241	Open in IMG/M
3300032896\|Ga0335075_10550874	Not Available	1159	Open in IMG/M
3300032955\|Ga0335076_10073597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3362	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.84%
Aquatic	Environmental → Aquatic	13.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Freshwater	Environmental → Aquatic → Freshwater	10.53%
Peat	Environmental → Terrestrial → Peat	3.51%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.75%
Sediment	Environmental → Aquatic → Sediment	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.16%
Loam	Environmental → Terrestrial → Soil → Loam	11.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.51%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.75%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.40%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	9.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.51%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	9.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.26%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.39%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.51%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.51%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.75%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027030	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030532	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE108SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100484951	3300001356	Peatlands Soil	MTNQATPAVRTPEQVPSQEAAPGVTVRAMLGDADGCRGLHQRRLSLASGTALTGTAGGQGEAWYVIRGSGTLDA
JGIcombinedJ51221_104133381	3300003505	Forest Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGRGEAWYVISGSGVLEAGG
JGIcombinedJ51221_104218111	3300003505	Forest Soil	MADTTGIVRRPEHVRAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSGAAALTGTVGGRGEAWYVISGSGVLEA
Ga0070731_102684842	3300005538	Surface Soil	VSAGPRAVVRRPEHVPGQEVAAGVTVAGMLDDQHGCRGLHQRRLRLDSGTVLTGAAGGQGEAWYVISGSGTLAAGAA
Ga0070731_103458602	3300005538	Surface Soil	MSNQATPPAVRTPEQVPSQPAAPGVTVREMLGEADGCRGLHQRRLSLSGGTAIAGTAGGRGEAWYV
Ga0070733_111088612	3300005541	Surface Soil	VSAGPRAVVRRPEHVPGQEVAAGVTVAGMLDDRHGCRGLHQRRLRLDSGTVLTGAAGGQGEAWYVISG
Ga0070763_107524442	3300005610	Soil	VTAGEPVVRGQVAARSLAPGVTVAELLDDRHGCRGLHQRRLRLAGGAEVTGAAEARGEAWYVIGGSGTLGTA
Ga0075017_1014017562	3300006059	Watersheds	VTARKPVVRQGEQVPLQTLAPGVTVAEMLNDEHGCLGLHQRRLRLADPAAPAGAVGSAGGVT
Ga0070765_1015961072	3300006176	Soil	MPDTTGIVRRPEHVPAGALAAGVTAAEMLNDEHGCRGLHQRRLRFGSGAALTETAGGRGEAWYVISGSGVLEADGSAGGTA
Ga0116221_10952892	3300009523	Peatlands Soil	MTNQATPAVRTPEQVPSQEAAPGVTVRAMLGDADGCRGLHQRRLSLASGTALTGTAGGRGEAWYVIRGTGTLDAEGHGTAALEPG
Ga0116224_102664431	3300009683	Peatlands Soil	VNTGQAAPTVRRPEQVPVSPLRPGVTAAEMLDDRHGCRGLHQRRLRFAGSTGTATGAETAGTAGGAETAGGA
Ga0136449_1005947612	3300010379	Peatlands Soil	VNTGQAAPAVRRPEQVPLSPLRPGVTAAEMLDDRHGCRGLHQRRLRFAGSTGTATGAETAGTAGGAETAGG
Ga0136449_1043234722	3300010379	Peatlands Soil	MPDTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAALTGTAGGRGEAWYVISGSGVLDAERTGRVALASG
Ga0182037_108127682	3300016404	Soil	MSAGQAAPVVRRPDQVPAGSLAPGITAAEMLNDQHGCRGLHQRRLRLARPAELAGTAEGRGEAWYVIRGSGVLAADAVFSGAAGQVGGGTLAGSG
Ga0182038_115992142	3300016445	Soil	VSRTPVVRRPEQALAGPLAPGVTAAQMLNDQHGCRGLHQRRLSLAADAGLTGTAEGRGEAWYVIRGSGVLTAGTGGTSPEAGGT
Ga0187812_12334961	3300017821	Freshwater Sediment	VSPVTAGTPVVRRPEQVPAGPLAPGVTAAEMLNDQHGCRGLHQRRLRLAGADALTGTAGGRGEAWFAISGSGVLDASA
Ga0187818_100920872	3300017823	Freshwater Sediment	VSVGTPVVRRPGQVPARPLAPGVTAAEMLNDQHGCRGLHQRRLRLAGGAAMTGTAGGQGEAWYVIRGSGVLDAD
Ga0187818_102304732	3300017823	Freshwater Sediment	VPARPLAPGLTAAEMLNDEHGCRGLHQRRLRFAGGGPAVTGTAEGRGEAWYVI
Ga0187820_12068921	3300017924	Freshwater Sediment	VSVGTPVVRRPGQVPARPLAPGVTAAEMLNDEHGCRGLHQRRLRLAGGGPAVTGTAEGRGEAW
Ga0187806_11583681	3300017928	Freshwater Sediment	MTAGRAAPAVRRPDQVPATPLGPGVTAAEMLDDRHGCRGLHQRRLRLAAGAGSAAGAETAGTAGGLGEAWYVITG
Ga0187806_12053951	3300017928	Freshwater Sediment	VSAGTPVVRRPGQVPARPLAPGVTAAEMLNDEHGCRGLHQRRLRFAGSGPAVTGTAEGCGEAWYVIR
Ga0187806_12491672	3300017928	Freshwater Sediment	MPAVRRPEQVPVRPLAPGVTATEMLNDEHGCRGLHQRRLRFAGGGPAVTGTAEGRGEAWYVIRGSGVL
Ga0187814_102852152	3300017932	Freshwater Sediment	VPARPLAPGVTAAEMLNDEHGCRGLHQRRLRLAGGGPAVTGTAEGRGEAWYVIRGSGVLDAGPA
Ga0187814_103770431	3300017932	Freshwater Sediment	VNQHAERATPVVRRQVRARALAPGVTVAELLDDRQGCRGLHQRRLRLAGGAEMTGTAGGRGEAWYVISGSGTLTAGT
Ga0187808_104372991	3300017942	Freshwater Sediment	VSVGTPVVRRPGQVPARPLAPGVTAAEMLNDQHGCRGLHQRRLRLAGGAAMTGTAG
Ga0187808_105638082	3300017942	Freshwater Sediment	LDAEQAAPAVRRQVPARALAPGVTMAELLDDRQGCRGLHQRRLRRAGGAELAGEARGRGEAWYVISG
Ga0187781_104553922	3300017972	Tropical Peatland	MSNQVTPVVRAPEQVLSRPAAPGVEVREMLGDADGCRGLHQRRLSLAGGTVLAGTAGGRGEAWYVIR
Ga0187766_113078691	3300018058	Tropical Peatland	VSAGRKAPAVRRAADVPARPLGPGVTAAEMLGDDQGCHGLHQRRLRFAGGARLTAAAGGQGEAWYVITGTGLLDTERAGPIA
Ga0187765_103958912	3300018060	Tropical Peatland	MSAGRKAPAVRRAAEVPARPLGPGVTAAEMLHDDQGCRGLHQRRLRFTGGAGLTAAAGGQGEAWYVITGAGVLDAERTGSI
Ga0187772_100752811	3300018085	Tropical Peatland	VNRPAAAGAAGIVSAEQAGPVIREPGQVPAVPLAPGVTVSELLNDQHGCRGLHQRLLRFAGGAEVTGGAAGEAWYVIRGAGTLEAGA
Ga0187772_109225401	3300018085	Tropical Peatland	MSAGRAAPVVRRPAQVPARRLAPGVTVSELLGDPEGCHGLHQRLLRFTGDAVLTGDAGGQGEAWYVTRGSGTLEAAQAVKLQRG
Ga0187770_112010061	3300018090	Tropical Peatland	MSNQATPAVRTPEQVPSRPAAPGVTIREMLGDAEGCRRLHQRRLSLAGGSVITGTAGGKGEGWYVIRG
Ga0210397_109223822	3300021403	Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGRGEAWYVISGSGVLEAGGGAVGTAG
Ga0210386_102657193	3300021406	Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAALTGTAGGRGEAWYV
Ga0213851_10688701	3300021860	Watersheds	MSTEQGAPAVRRPEEVPATPLGPGVTVAEMLDDRHGCRGLHQRRLRFAGGAGAAGTAGGQGEAWYVING
Ga0242659_10684302	3300022522	Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGRGEAWYVI
Ga0242668_10327871	3300022529	Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGHGEAWYVIHGSGILDVAAGEA
Ga0212123_108168991	3300022557	Iron-Sulfur Acid Spring	MPDTRAVVRRPEQVPGDPVAPGVTAAQMLNDEHGCRGLHQRRLRFNGGAALTGTAGGRGEAWYVIYG
Ga0242671_10676051	3300022714	Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGRGEAWYVISGSGVL
Ga0242661_11554952	3300022717	Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSEAVLTGTAGGHGEAWYVIHGSGILDVAAGEAGTIELQ
Ga0224564_11382762	3300024271	Soil	MSAGRAGPTVRRPEQVPVSPLGPGVTVAEMLDDRHGCRGLHQRRLRFAGGAGIAGTASGQGEAWYVISGSGQLDTE
Ga0207416_12493291	3300025134	Iron-Sulfur Acid Spring	MPDTTAIVRRPGQVPGDPVAPGVTAAQMLNDEHGCRGLHQRRLRFSGGAVLTGTAAGRGEAWYV
Ga0257154_10132401	3300026467	Soil	MPETTGIVRRPEHVAAGVLAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAALTGTAGRQGEAWYVISGS
Ga0257158_10652312	3300026515	Soil	MPDTTAVVRRPEQVPGDPVAPGVTAARMLNDEHGCRGLHQRRLRFSSGAALTGTAGGRGEAWYVISGSGVLELNGSTAGTVELGPG
Ga0209648_107728131	3300026551	Grasslands Soil	MSVEQGAPVVRRPEQVPARPLGPGVTASELLDDQHGCRGLHQQRLRFAGGAGITGIAGG
Ga0208240_10016791	3300027030	Forest Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGHGEAWYVIHGSGILDGA
Ga0208730_10047832	3300027047	Forest Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGRGEAWYVISGSGVLEADGSAGGTALPPEE
Ga0208724_10162962	3300027064	Forest Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFGSGAVLTGTAGGR
Ga0208608_1128151	3300027165	Forest Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGRGEAWYVISGSGVLEADGGAVG
Ga0208241_10223722	3300027297	Forest Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAVLTGTAGGRRSSRWKPTLPR
Ga0209625_10310122	3300027635	Forest Soil	MPETTAIVRRPEQVPGDPVAPGVTAAQMLNDEHGCRGLHQRRLRFSSGAALTGPAGGRGEAWYVI
Ga0209274_100329191	3300027853	Soil	VSAGTPAVRRPEQVPARPLAPGVTAAEMLNDEHGCRGLHQRRLRFEGGATLTGTAGGRGE
Ga0209579_105461031	3300027869	Surface Soil	MSNQATPPAVRTPEQVPSQPAAPGVTVREMLGEADGCRGLHQRRLSLSGGTAIAGTAGGRGEAWYVIRG
Ga0302220_103470952	3300028742	Palsa	VSAGQAAPVVRRPDQVPSDPLAPGVTAAEMLNDQHGCRGLHQRRLRFDGAAMLTGTAGGRGEAWYVIRGSGTLDAGAGGTVE
Ga0302221_105370132	3300028806	Palsa	VTAGTPVVRRPEQVPPGPLAPGVAAMQMLNDEHGCRALHQRRLRLEEGAALAATAGGRGEAWYVIRGSGILEAGAA
Ga0308309_103812742	3300028906	Soil	MPDTTAIVRRPEQVPGDPAAPGVTAAQMLNDEHGCRRLHQRRLRFSSEAVLTGTAGGHG
Ga0308309_116517071	3300028906	Soil	MSAEAAAPTVRRPEQIPGQTLGAGVTATELLNDEHGCRGLHQRRLRFAGGAGIAGTASGQGEAWYVICGSGQLDT
Ga0222748_11189802	3300029701	Soil	MADTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRWLHQRRLRFSSGAVLTGTAGGRGEAWYVIS
Ga0311340_101887651	3300029943	Palsa	VSAGQAAPVVRRPDQVPSDPLAPGVTAAEMLNDQHGCRGLHQRRLRFDGAATLAGMAGGRGEAWYVIRGSGTLDASAGG
Ga0311371_123177181	3300029951	Palsa	VSAGQAAPVVRRPDQVPSDPLAPGVTAAEMLNDQHGCRGLHQRRLRFDGAAMLTGTAGGRGEAWYVIRGSGTLDAGAGG
Ga0210290_13505562	3300030532	Soil	MADTTGIVRRPEHVPAGPLAPGVTAAEMLNDEHGCRVLHQRRLRFSGGAALTGTAGGRGEAWYVISGSGVLEADRS
Ga0265460_110404572	3300030740	Soil	MSNQATPAVVRMREQVPSRPAAPGVTAREMLGDADGCRGLHQRRLSLSGGSVITGTAGGRGEAWYVKTSGTE
Ga0265459_135160652	3300030741	Soil	MSAEQAVPAVRRPEQVPVSPLGPGVTVAEMLDDRHGCRGLHQRRLRFAGGAGLTAAAGGQGEAWYVITGTGR
Ga0265461_107772841	3300030743	Soil	VSAGQAPVVRRPEQVPAGSLAPGVTAAEMLNDRHGCRGLHQRRLSLASGTALTGTAGGQGEAWYVIRGSGTLDAEGH
Ga0170834_1075204712	3300031057	Forest Soil	MADTTGIVRRPEHVPAGPLAPGVTAAEMLNDEHGCRGLHQRRLRFSSGAALTGTAGGQGETWYVIS
Ga0265760_100310021	3300031090	Soil	MSAEQAVPAVRRPEQVPVSPLGPGVTVAEMLDDRHGCRGLHQRRLRFAGGAGIAGTASGQGEAWYVISGSGQLDTGEEP
Ga0318516_103493822	3300031543	Soil	VSAGQAAPVVRRPQQVPARGLAPGVTAAEMLNDQHGCRGLHQRRLSLASGALLTGTAEGRGEAWYVIHGSG
Ga0318573_100912851	3300031564	Soil	VAPDAEQAAPVVRRQVPARALAPGVTMAELLDDRQGCRGLHQRRLRLAGGAEIVGEAGGRGEAWYVISGSGTLAAG
Ga0318573_102676531	3300031564	Soil	MSAGQAAPVVRRPDQVPAGSLAPGVTAAEMLNDQHGCRGLHQRRLRLAGHAELAGTAEGRGEAWYVIGGSG
Ga0318573_106043991	3300031564	Soil	VSAGQAAPVVRRPQQVPARGLAPGVTAAEMLNDQHGCRGLHQRRLSLASGALLTGTAEGRGEAWYV
Ga0318515_100728451	3300031572	Soil	VSAGQAAPVVRRPQQVPARGLAPGVTAAEMLNDQHGCRGLHQRRLSLASGALLTGTAEGRGEAWYVIHGSGVLAAGTA
Ga0310915_104723062	3300031573	Soil	VAPDAEQAAPVVRRQVPARALAPGVTMAELLDDRQGCRGLHQRRLRLAGGAEIVGEAGGRGEAWYVIS
Ga0310915_107091702	3300031573	Soil	MSAGQAAPVVRRPDQVPAGSLAPGITAAEMLNDQHGCRGLHQRRLRLARPAELAGTAEGRGEAWYVIRGSGVLAANAETVD
Ga0318555_100166011	3300031640	Soil	MSAGQAAPVVRRPDQVPAGSLAPGITAAEMLNDQHGCRGLHQRRLRLAGHAELAGTAEGRGEAWYV
Ga0318560_103299501	3300031682	Soil	VSAGQAAPAVRRPEQVSACALAPGVTAAEMLNDQHGCRRLHQRRLSLAADAGLTGTAEGRGEAWYVI
Ga0307474_114846842	3300031718	Hardwood Forest Soil	MPDTTAIVRRPEQVPGDPAAPGVTAAQMLNDEHGCRGLHQRRLRFSSGAALTGTAGGHGEAWY
Ga0318493_100767403	3300031723	Soil	VDAEPAAPVVRRQVPARALAPGVTMAELLDDRQRCRGLHQRRLRLAGGAEIAGEAGGRGEAWYVISGSGT
Ga0318493_102928801	3300031723	Soil	MGIALKPVVRRPEQVPARLVAPGVTAAEMLNDQHGCRGLHQRRLRLAGDAPLDGTAEGQGEAWYVIRGSGVLDAGAAGTAELRP
Ga0318493_103371371	3300031723	Soil	VSAGQAAPVVRRPQQVPARPLAPGVTVAEMLNDQHGCRGLHQRRLSLAGGAVLTGTAEGRGEA
Ga0318500_101569111	3300031724	Soil	MVVNAGTPVVRRPEQVPARPLAPGVTAADMLNDQHGCCGLHQRRLRLAGDAALTGTAAGQGEAWYVIRGSGVLDAGAAGTAELRPG
Ga0318500_102324022	3300031724	Soil	MSAGQAAPVVRRPDQVPADSLAPGVTAAEMLNDQHGCRGLHQRRLRLAGHAELAGTAEGRGEA
Ga0318502_110217632	3300031747	Soil	VSAGQAAPVVRRPQQVPARPLAPGVTVAEMLNDQHGCRGLHQRRLSLAGGAVLTGTAEGRGEAWYVIHGSGVLA
Ga0318526_103244271	3300031769	Soil	VTHADAGEPVVRRREQVPVHELAPGVTVADMLNDEHGCRGLHQRRLRLAGPATLAATAEGRGEAW
Ga0318521_101955152	3300031770	Soil	MGIALKPVVRRPEQVPARLVAPGVTAAEMLNDQHGCRGLHQRRLRLAGDAPLDGTAEGQGEAWYVIRG
Ga0318548_105314931	3300031793	Soil	VSRTPVVRRPEQALAGPLAPGVTAAQMLNDQHGCRGLHQRRLSLAAGAALAGTAEGRGEA
Ga0318557_100588331	3300031795	Soil	VDAERAAPVVRRQVPARALAPGVTMAELLDDRQRCRGLHQRRLRLAGGAEIAGEAGGRGEAWYVISGSGT
Ga0318576_105780332	3300031796	Soil	MGIALKPVVRRPEQVPARLVAPGVTAAEMLNDQHGCRGLHQRRLRLAGDAPLDGTAEGQGEAWY
Ga0318567_106201812	3300031821	Soil	MSAGQAAPVVRRPDQVPADSLAPGVTAAEMLNDQHGCRGLHQRRLRLAGHAELAGTAEGRGEAWYVIGGSGV
Ga0318564_102409922	3300031831	Soil	VDAERAAPVVRRQVPARALAPGVTMAELLDDRQRCRGLHQRRLRLAGGAEIAGEAGGRGEAWYVISGSGTLAAG
Ga0318499_102553921	3300031832	Soil	VTHADAGEPVVRRREQVPVHELAPGVTVADMLNDEHGCRGLHQRRLRLAGPATLAATAE
Ga0318527_101295722	3300031859	Soil	VAPDAEQAAPVVRRQVPARALAPGVTMAELLDDRQGCRGLHQRRLRLAGGAEIVGEAGGRGEAWYVI
Ga0306919_111936851	3300031879	Soil	VAPDAEQAAPVVRRQVPARALAPGVTMAELLDDRQGCRGLHQRRLRLAGGAEIVGEAGGRGEAWYVISGSGTLAAGT
Ga0306923_110792702	3300031910	Soil	VAPDAEQAAPVVRRQVPARALAPGVTMAELLDDRQGCRGLHQRRLRLAGGAEIVGEAGGRGEAWYVISGSGTLAA
Ga0310913_112439791	3300031945	Soil	MSAGQAAPVVRRPDQVPADSLAPGVTAAEMLNDQHGCRGLHQRRLRLAGHAELAGTAEGRGEAWYVIGGSGVLAADAGTVDLRAGTA
Ga0310910_108148861	3300031946	Soil	VSAGQAAPAVRRPEQVSACALAPGVTAAEMLNDQHGCRRLHQRRLSLAADAGLTGTAEGRGE
Ga0306926_111601532	3300031954	Soil	VTHADAGEPVVRRREQVPVHELAPGVTVADMLNDEHGCRGLHQRRLRLAGPATLAATAEGRGEAWYVIRGSGVLDAGAA
Ga0307479_121200232	3300031962	Hardwood Forest Soil	MPDTTGIVRRPEHVPAGALAPGVTAAEMLNDEHGCRGLHQRRLRFTGDAALTGTA
Ga0318562_100983873	3300032008	Soil	VDAERAAPVVRRQVPARALAPGVTVAELLDDRQGCRGLHQRRLRLAGGAEIVGEAGGRGEAWYVIS
Ga0318562_100998933	3300032008	Soil	MVVNAGTPVVRRPEQVPARPLAPGVTAADMLNDQHGCRGLHQRRLSLAGDAALTGTAAGQGEAWYVIRGSG
Ga0318562_101350981	3300032008	Soil	VTHADAGEPVVRRREQVPVHELAPGVTVADMLNDEHGCRGLHQRRLRLAGPATLAATAEGRGEAWYVIRGSGVLDA
Ga0318563_106734001	3300032009	Soil	VSAGQAAPVVRRPQQVPARPLAPGVTVAEMLNDQHGCRGLHQRRLSLAGGAVLTGTAEGRGEAWYVIH
Ga0318569_101728901	3300032010	Soil	MSAGQAAPVVRRPDQVPADSLAPGVTAAEMLNDQHGCRGLHQRRLRLAGHAELAGTAEGRGEAWYVIRGSGVLAADAGTVD
Ga0318507_105097271	3300032025	Soil	VSAGQAAPAVRRPEQVSACALAPGVTAAEMLNDQHGCRRLHQRRLSLAADAGLTGTAEGRGEAWYVIRGSGLVPPVPAVSTPD
Ga0318575_107226211	3300032055	Soil	VSAGRKAPAVRRAAEVPARPLGPGVTAAEMLNDDQGCRGLHQRRLRLAGGAPLAGTGAGRGEAWYVIT
Ga0318533_105606272	3300032059	Soil	MGIALKPVVRRPEQVPARLVAPGVTAAEMLNDQHGCRGLHQRRLRLAGDAPLDGTAEGQGEA
Ga0318510_105208442	3300032064	Soil	MVVNAGTPVVRRPEQVPARPLAPGVTAADMLNDQHGCCGLHQRRLRLAGDAALTGTAAGQGEAWYVIRGSGVLD
Ga0318514_104177071	3300032066	Soil	MSAGQAAPVVRRPDQVPAGSLAPGVTAAEMLNDQHGCRGLHQRRLRLAGDAPLDGTAEGQGE
Ga0318577_100261531	3300032091	Soil	MSAGQAAPVVRRPDQVPAGSLAPGITAAEMLNDQHGCRGLHQRRLRLARPAELAGTAEGRGEAWYVIRGSG
Ga0307471_1016206742	3300032180	Hardwood Forest Soil	VTPVVRRPEQVPAGQLAPGVTAADMLNDQHGCRGLHQRRLSLAGGAALAGTAEGRGEAWYVIRGSGVLAAGTAGTGPEAGGSAGLGD
Ga0306920_1041879042	3300032261	Soil	VSAGQAAPVVRRPQQVPARPLAPGVTVAEMLNDQHGCRGLHQRRLSLAGGAVLTGTAEGRGEAWYVIHGSGVLAAG
Ga0335078_107565391	3300032805	Soil	MDAGTPAVRRPEQVPPRPLAPGVTAAEMLNDEHGCRGLHQRRLRLAGDAALTGTAGGQGE
Ga0335074_102257833	3300032895	Soil	MTAGTPVVRRPEQVPAGPLAPGVAAREMLNDEHGCRGLHQRRLRLQSGAELAATARG
Ga0335075_105508742	3300032896	Soil	VTAGTPVVRRPEQVPASPLAPGVTAREMLTDEHGCRGLHQYRLSLAGDGAALEGSAGGRGEAWYV
Ga0335076_100735974	3300032955	Soil	MTANAGIPAVRRPEQVPSRPLAPGVTAAEMLNDQHGCRGLHQRRLRLAGDAVLTGTAGGQGEAWYV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081562

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences