Metagenome / Metatranscriptome Family F081307

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081307
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	80 residues
Representative Sequence	VRWSPPSRTVDVTAFIVVAELGGRAQQEHTVGPAGNSALFAGLQAGRRYCFVVGTVVQSASGQQGTATAPAVCTVIR
Number of Associated Samples	96
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	91.23 %
% of genes from short scaffolds (< 2000 bps)	90.35 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.877 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.070 % of family members)
Environment Ontology (ENVO)	Unclassified (31.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.614 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 31.43% Coil/Unstructured: 68.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF06146	PsiE	43.86
PF00196	GerE	36.84
PF00041	fn3	4.39
PF03976	PPK2	1.75
PF13560	HTH_31	0.88
PF13683	rve_3	0.88
PF11716	MDMPI_N	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3223	Phosphate starvation-inducible membrane PsiE (function unknown)	General function prediction only [R]	43.86
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	1.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
All Organisms	root	All Organisms	49.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
cellular organisms	root	All Organisms → cellular organisms	49.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.58 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.58 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.95 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	22.81 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.88 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	21.93 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	21.93 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.88 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.88 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	21.93 %
Nocardiopsis metallicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis metallicus	0.88 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_101206708	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300004479\|Ga0062595_101615918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	605	Open in IMG/M
3300005187\|Ga0066675_11106735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300005332\|Ga0066388_100205356	All Organisms → cellular organisms → Bacteria	2593	Open in IMG/M
3300005363\|Ga0008090_15556416	Not Available	529	Open in IMG/M
3300005547\|Ga0070693_100273025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1129	Open in IMG/M
3300005764\|Ga0066903_103754162	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005899\|Ga0075271_10112539	Not Available	521	Open in IMG/M
3300006041\|Ga0075023_100117496	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300006102\|Ga0075015_100812439	Not Available	562	Open in IMG/M
3300006578\|Ga0074059_11836973	Not Available	620	Open in IMG/M
3300006806\|Ga0079220_11107292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	642	Open in IMG/M
3300006953\|Ga0074063_13877668	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300009792\|Ga0126374_11717806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	522	Open in IMG/M
3300010046\|Ga0126384_11570073	Not Available	619	Open in IMG/M
3300010047\|Ga0126382_11615203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	602	Open in IMG/M
3300010048\|Ga0126373_10515218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1240	Open in IMG/M
3300010048\|Ga0126373_10738378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1044	Open in IMG/M
3300010048\|Ga0126373_11379059	Not Available	770	Open in IMG/M
3300010326\|Ga0134065_10449218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	527	Open in IMG/M
3300010358\|Ga0126370_10941257	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300010358\|Ga0126370_11533938	Not Available	635	Open in IMG/M
3300010358\|Ga0126370_11665766	Not Available	613	Open in IMG/M
3300010360\|Ga0126372_10259286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1498	Open in IMG/M
3300010360\|Ga0126372_12122256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	610	Open in IMG/M
3300010361\|Ga0126378_11052851	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300010366\|Ga0126379_12206340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	652	Open in IMG/M
3300010376\|Ga0126381_101564275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	953	Open in IMG/M
3300010376\|Ga0126381_103341825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis metallicus	632	Open in IMG/M
3300010398\|Ga0126383_10376046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1450	Open in IMG/M
3300010398\|Ga0126383_12054927	Not Available	659	Open in IMG/M
3300010398\|Ga0126383_13563662	Not Available	508	Open in IMG/M
3300010863\|Ga0124850_1140421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	570	Open in IMG/M
3300011106\|Ga0151489_1655768	Not Available	717	Open in IMG/M
3300012208\|Ga0137376_10298781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1397	Open in IMG/M
3300012356\|Ga0137371_10123033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2027	Open in IMG/M
3300012948\|Ga0126375_11325846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	606	Open in IMG/M
3300012971\|Ga0126369_10555987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1213	Open in IMG/M
3300012971\|Ga0126369_13010154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	552	Open in IMG/M
3300012987\|Ga0164307_11122577	Not Available	647	Open in IMG/M
3300014969\|Ga0157376_12284771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	580	Open in IMG/M
3300015371\|Ga0132258_12718785	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300015372\|Ga0132256_101181303	Not Available	879	Open in IMG/M
3300016319\|Ga0182033_10289388	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300016357\|Ga0182032_10199474	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300016371\|Ga0182034_11841882	Not Available	534	Open in IMG/M
3300016445\|Ga0182038_11290318	Not Available	652	Open in IMG/M
3300017947\|Ga0187785_10269426	Not Available	771	Open in IMG/M
3300017947\|Ga0187785_10594341	Not Available	567	Open in IMG/M
3300017966\|Ga0187776_11108931	Not Available	588	Open in IMG/M
3300017973\|Ga0187780_10950667	Not Available	625	Open in IMG/M
3300017999\|Ga0187767_10250348	Not Available	583	Open in IMG/M
3300018064\|Ga0187773_10594156	Not Available	675	Open in IMG/M
3300020581\|Ga0210399_11477007	Not Available	528	Open in IMG/M
3300025885\|Ga0207653_10129714	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300025898\|Ga0207692_10992509	Not Available	554	Open in IMG/M
3300025934\|Ga0207686_11319399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	593	Open in IMG/M
3300026075\|Ga0207708_10890674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	770	Open in IMG/M
3300026121\|Ga0207683_11607043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	599	Open in IMG/M
3300026307\|Ga0209469_1129089	Not Available	589	Open in IMG/M
3300026475\|Ga0257147_1015223	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300027874\|Ga0209465_10277517	Not Available	839	Open in IMG/M
3300028784\|Ga0307282_10569599	Not Available	550	Open in IMG/M
3300028828\|Ga0307312_10906147	Not Available	584	Open in IMG/M
3300031544\|Ga0318534_10245961	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300031671\|Ga0307372_10110615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2127	Open in IMG/M
3300031671\|Ga0307372_10461857	Not Available	621	Open in IMG/M
3300031679\|Ga0318561_10036988	All Organisms → cellular organisms → Bacteria	2390	Open in IMG/M
3300031719\|Ga0306917_11351802	Not Available	550	Open in IMG/M
3300031720\|Ga0307469_12397417	Not Available	515	Open in IMG/M
3300031723\|Ga0318493_10233179	Not Available	979	Open in IMG/M
3300031724\|Ga0318500_10194896	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300031765\|Ga0318554_10378168	Not Available	804	Open in IMG/M
3300031770\|Ga0318521_10360179	Not Available	863	Open in IMG/M
3300031777\|Ga0318543_10207286	Not Available	871	Open in IMG/M
3300031779\|Ga0318566_10484958	Not Available	606	Open in IMG/M
3300031780\|Ga0318508_1125026	Not Available	723	Open in IMG/M
3300031781\|Ga0318547_10555880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300031795\|Ga0318557_10006468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4082	Open in IMG/M
3300031796\|Ga0318576_10569721	Not Available	533	Open in IMG/M
3300031798\|Ga0318523_10304377	Not Available	795	Open in IMG/M
3300031832\|Ga0318499_10220160	Not Available	739	Open in IMG/M
3300031845\|Ga0318511_10378002	Not Available	647	Open in IMG/M
3300031859\|Ga0318527_10355148	Not Available	625	Open in IMG/M
3300031860\|Ga0318495_10416235	Not Available	591	Open in IMG/M
3300031890\|Ga0306925_10256406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1885	Open in IMG/M
3300031981\|Ga0318531_10221654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300032025\|Ga0318507_10196251	Not Available	871	Open in IMG/M
3300032041\|Ga0318549_10578372	Not Available	504	Open in IMG/M
3300032059\|Ga0318533_11346768	Not Available	521	Open in IMG/M
3300032066\|Ga0318514_10241891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	949	Open in IMG/M
3300032066\|Ga0318514_10653382	Not Available	559	Open in IMG/M
3300032066\|Ga0318514_10679954	Not Available	547	Open in IMG/M
3300032067\|Ga0318524_10157529	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300032067\|Ga0318524_10211204	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300032205\|Ga0307472_100952414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	800	Open in IMG/M
3300032205\|Ga0307472_101569244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	645	Open in IMG/M
3300032770\|Ga0335085_10277916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1997	Open in IMG/M
3300032770\|Ga0335085_10708865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1118	Open in IMG/M
3300032782\|Ga0335082_11240844	Not Available	613	Open in IMG/M
3300032783\|Ga0335079_10522961	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300032805\|Ga0335078_10572903	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300032828\|Ga0335080_12259248	Not Available	521	Open in IMG/M
3300033290\|Ga0318519_10294705	Not Available	948	Open in IMG/M
3300033290\|Ga0318519_10955964	Not Available	531	Open in IMG/M
3300033805\|Ga0314864_0091797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	734	Open in IMG/M
3300033806\|Ga0314865_182117	Not Available	562	Open in IMG/M
3300034820\|Ga0373959_0006316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1964	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.98%
Host-Associated	Host-Associated	7.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.23%
Plants	Host-Associated → Plants	7.02%
Aquatic	Environmental → Aquatic	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Sediment	Environmental → Aquatic → Sediment	1.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.04%
Loam	Environmental → Terrestrial → Soil → Loam	7.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%
Clay	Environmental → Terrestrial → Soil → Clay	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.88%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.88%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.75%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.75%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.63%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.75%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.75%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.75%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.88%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005899	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1012067081	3300004479	Soil	ASPVLPAQQARYQVTRVRVAARPRGIRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTIGPAGNSALFAGLQAGHRYCFVVGTVVKSVSGQQGTATAPPVCRVIR*
Ga0062595_1016159182	3300004479	Soil	RVAARPGGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPGGKSAMFAGLQAGRHYCFVVGTVVQSASGQQGTATAPAVCTVAR*
Ga0066675_111067351	3300005187	Soil	VRWSPPSRTVDVTAFIVVAELGGRAQQEHTVGPAGNSALFAGLQAGRRYCFVVGTVVQSASGQQGTATAPAVCTVIR*
Ga0066388_1002053561	3300005332	Tropical Forest Soil	RVTERPRGTRVQWSPPPRTAGVIAFIVIAELGGRAQQEQTVGPAGRSAVFAGLRAGRRYCFVVGSVVEPGGQAETATTPDVCKVIR*
Ga0008090_155564162	3300005363	Tropical Rainforest Soil	QPGDPPSPAVPGQQARYQVTRVRVAARPRGMRVRWSAPSRTVDVIAFIVVAELGGRAQQEHTVGPHGNSTLFAGLQNGHRYCFVVGTVVQSASGQQGTATAPAVCMVAR*
Ga0070693_1002730252	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	SRTVDVIAFIVVAELGGQVQQEHTVGPAGNSALFAGLLAGHHYCFVVGTVVRASSGQQGTATAPAVCTVAP*
Ga0066903_1037541622	3300005764	Tropical Forest Soil	SPPSRTVDVIAFIVVAELGGQAQQEHTVGPHGNATLFAGLQAGHHYCFVVGTVVKSASGQQGTATAPPICTVAR*
Ga0075271_101125391	3300005899	Rice Paddy Soil	TDGVTAFIVVAELGGRAKQEQTVGATGHGAVFAGLRRGHRYCFVVGTVVETASGQAGTATAPQVCSVVRG*
Ga0075023_1001174961	3300006041	Watersheds	AQQEHTVGPAGSSVLFAGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCTLVR*
Ga0075015_1008124392	3300006102	Watersheds	IVVAELGGRAQQEHTVGPAGSSALFAGLRAGRRYCFVVGTVVKSASGQQGTATAPAVCTLVR*
Ga0074059_118369732	3300006578	Soil	AFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCTLVR*
Ga0079220_111072922	3300006806	Agricultural Soil	RTVDVIAFIVVAELGGQVQQEHTVGPAGNSALFAGLQAGHHYCFVVGTVVRASSGQQGTATAPAVCTVAP*
Ga0074063_138776681	3300006953	Soil	VRVAARPRGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCTLVR*
Ga0126374_117178061	3300009792	Tropical Forest Soil	ARPGGMRVRWSPPSRTVDVIAFIVIAELDGRAQQEHTVGPGGSSAVFAGLQVGRRYCFVVGTVVKSASGQQGTATAPAVCTAAR*
Ga0126384_115700731	3300010046	Tropical Forest Soil	DVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGHRYCFVVGTVVKSASGQQGTATAPAVCTLVR*
Ga0126382_116152032	3300010047	Tropical Forest Soil	VDVIAFIVVAELGGRAQQEHTVGPPRNSALFAGLQAGRRYCFVVGTVVRSASGQQGTATAPAVCTVVR*
Ga0126373_105152181	3300010048	Tropical Forest Soil	RTVDVIAFIVVAELGGRAQQEHTVGPAGSSSLFAGLQAGHRYCFVVGTVVKSASGQQGTATAPAVCTLVR*
Ga0126373_107383783	3300010048	Tropical Forest Soil	QQAQYRATGIQVAPRPRGAVVRWSPPSHAAGVVAFIVLAELGGRAQQEHTVGAAGHRTVFAGLKVGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR*
Ga0126373_113790592	3300010048	Tropical Forest Soil	VRWSAPSRTVDVIAFIVVAELGGRAQQEHTVGPHGNSTLFAGLQPGHRYCFVVGTVVQSASGQQGTATAPAVCTVAR*
Ga0134065_104492181	3300010326	Grasslands Soil	GGRAQQEHTVGTAGSSALFAGLQAGRRYCFVVGTVVQSASGQQGTATAPAVCTVIR*
Ga0126370_109412572	3300010358	Tropical Forest Soil	VRVAARPGGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPGGKSAMFAGLQAGRHYCFVVGTVVQSASGQQGTATAPAVCTVAR*
Ga0126370_115339382	3300010358	Tropical Forest Soil	GQQAQYRATGIQVAPRPRGAVVRWSPPSHAAGVVAFIVLAELGGRAQQAHTVGANGHRAVFAGLKAGRRYCFVVGTVVESAGGQAGTATAPDVCQVIR*
Ga0126370_116657661	3300010358	Tropical Forest Soil	PAKYQVTRVRVAARPRGIRVQWSPPSRTVDVIAFIVVAELGGRAQQEQTVGPAGSSSLFAGLQAGQRYCFVVGTVVKSASGQQGTATAPAVCTLVR*
Ga0126372_102592861	3300010360	Tropical Forest Soil	PSPAARATPAASPALPGQQAQYQVTRVRVAARPGGMRVRWSPPSRTVDVIAFIVVAELDGRAQQEHTVGPGGSSAVFAGLQASRRYCFVVGTVVKSASGQQGTATAPAVCTAAR*
Ga0126372_121222561	3300010360	Tropical Forest Soil	QYRVTRIRVAVRPHGAGVRVRWGAPPRTAGAIAFIVVAELGGRAQQEHTVGPAGHSAVFMGLRPGRRYCFVVGTVVKPASGQAATATAPAVCKVIR*
Ga0126378_110528511	3300010361	Tropical Forest Soil	LGGRAQQEHTVGPAGSSSLFAGLQAGHRYCFVVGTVVKAASGQQGTASAPPVCMVVR*
Ga0126379_122063402	3300010366	Tropical Forest Soil	VRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSSLFAGLQAGHRYCFVVGTVVKAASGQQGTASAPPVCMVVR*
Ga0126381_1015642753	3300010376	Tropical Forest Soil	VVAFIVLAELGGRAQQEHTVGAAGHMAVFAGLKVGRRYCFVVGTVVESAGGQAGTATAPDVCRAIR*
Ga0126381_1033418251	3300010376	Tropical Forest Soil	SPPSRTVDVIAFIVVAELGGRAQQEHTVGPTGSSSLFADLQAGQRYCFVVGTVVKSPSGQQGTASAPSVCTVVR*
Ga0126383_103760462	3300010398	Tropical Forest Soil	WSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSSLFAGLQAGHRYCFVVGTVVKAASGQQGTASAPPVCMVVR*
Ga0126383_120549271	3300010398	Tropical Forest Soil	YRALGVEVAPRPGGAVVRWSPPPHAAGVVAFIVLAELGGRAQQEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR*
Ga0126383_135636621	3300010398	Tropical Forest Soil	PSPAARATPAASPALPGQQAQYQVTRVRVAARPGGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTIGPEGNSAVFAGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCTAAR*
Ga0124850_11404212	3300010863	Tropical Forest Soil	SPPSRAVDVIAFIVVAELDGRAQQEHTVGPGGSSAVFAGLQASRRYCFVVGTVVKSASGQQGTATAPAVCTAAR*
Ga0151489_16557681	3300011106	Soil	QQEHTVGPAGASALFAGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCTLVR*
Ga0137376_102987811	3300012208	Vadose Zone Soil	SPPSRTVDVIAFIVVAELGGQAQQEHTVGPAGNSALFAGLQAGRHYCFVVGTVVKSASGQQGTATAPAVCTVAR*
Ga0137371_101230332	3300012356	Vadose Zone Soil	SPAARATPAASPALPGQQARYQVNRVRVAARPRGMQVGWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGRRYCFVVGTVVKSASGQQGTATTPAVCTLVR*
Ga0126375_113258461	3300012948	Tropical Forest Soil	GMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPGGTSAMFAGLQAGRHYCFVVGTVVQSASGQQGTATAPAVCTAAR*
Ga0126369_105559871	3300012971	Tropical Forest Soil	RTAGAIAFIVVAELGGRAQQEHTVGPAGHSAVFVGLRPGRRYCFVVGTVVKPASGQAATATAPAVCKVIR*
Ga0126369_130101541	3300012971	Tropical Forest Soil	QFEATRVRVTERARGTRVQWGPPPRTAGVIAFIVIAELGGRAQQEQTVGPAGHSAVFAGLRGGRRYCFVVGSVVEPGGQAETATTPDVCKVIR*
Ga0164307_111225771	3300012987	Soil	RVQQEHTVGPAGNSALFGGLQAGHHYCFVVGTVVRASSGQQGTATAPAVCTLVR*
Ga0157376_122847712	3300014969	Miscanthus Rhizosphere	VDVIAFIVVAELGGQVQQEHTVGPAGNSALFAGLLAGHHYCFVVGTVVRASSGQQGTATAPAVCTVAP*
Ga0132258_127187851	3300015371	Arabidopsis Rhizosphere	QPADPSPAARATPAASPVLPGQQARYQVTRVRVAARPPGIRVRWSPPSRTVDVIAFIVVAELGGRAQEEHTVGPAGSSTLFAGLQAGHRYCFVVGTVVKAASGQQGTATAPAVCTFVR*
Ga0132256_1011813031	3300015372	Arabidopsis Rhizosphere	SSPAARATPAASPMLPGQQARYQVTRVRVAARPPGIRVRWSPPSRTVDVIAFIVVAELGGRAQEEHTVGPPGSSTLFAGLQAGHRYCFVVGTVVKAASGQQGTATAPAVCTFVR*
Ga0182033_102893883	3300016319	Soil	WGIFTLTRAQPGDPPAASPALPGQQARYQVTRVRVAARPRGMRVRWSPPSRTVDVVAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLVR
Ga0182032_101994741	3300016357	Soil	LAELGGRAQQEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0182034_118418822	3300016371	Soil	DVIAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0182038_112903181	3300016445	Soil	SPPPHAAGVVAFIVLAELGGRAQQEHTVGATGQRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0187785_102694262	3300017947	Tropical Peatland	VIAFIVVAELGGRAQQEHTVGPHGNSALFAGLQAGRHYCFVVGTVVKSASGQQGTATAPAVCTVVR
Ga0187785_105943411	3300017947	Tropical Peatland	RGAVVRWSPPPHAAGVVAFIVLAELGGRAQQEHTVGATGHTAVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPGVCRVIR
Ga0187776_111089311	3300017966	Tropical Peatland	DQATEVRVVRVAGRQRGAEIQWGRPSRAANVVAFVVIAEIGGRAQQEHTVGPAGHSAVFAGLTPGRRYCFVVGTVVESAGGQAGTASAPAVCRVIR
Ga0187780_109506672	3300017973	Tropical Peatland	AAGVVAFIVVAELGGRAQQEHTVGPAGHSAVFAGLTAGRRYCFVVGTVVESAGGQAGTATAPGVCRVIR
Ga0187767_102503482	3300017999	Tropical Peatland	PSPAARATPAASPALPGQQARYQVTRVHAAARPLGIRVRWSPPSRTVDVIAFIVVAELGGRVQQEHTIGPGGHSAVFAGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCRVVR
Ga0187773_105941561	3300018064	Tropical Peatland	GGRAQQAHTVGPAGSSALFAGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCTAAR
Ga0210399_114770071	3300020581	Soil	RYRVTRVRVAARPRGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCTLVR
Ga0207653_101297141	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	LVWGIIARAQPGDPSPAARATPAASPVLPGQQARYQATRVRVTARPRGMRVRWSPPSRTVDVIAFIVVAELGGQVQQEHTVGPAGNSALFAGLQAGHHYCFVVGTVVRASSDQQGTATAPAVCTVAP
Ga0207692_109925091	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AARATPAASPVLPGQQARYQATRVRVTARPRGMRVRWSPPSRTVDVIAFIVVAELGGQVQQEHTVGPAGNSALFAGLLAGHHYCFVVGTVVRASSGQQGTATAPAICTVTP
Ga0207685_104529212	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	QQEHTVGPAGNSALFAGLLAGHHYCFVVGTVVRASSGQQGTATAPAICTVTP
Ga0207706_111476571	3300025933	Corn Rhizosphere	EHTVGPAGNSALFAGLLAGHHYCFVVGTVVRASSGQQGTATAPAICTVTP
Ga0207686_113193991	3300025934	Miscanthus Rhizosphere	VAELGGQVQQEHTVGPAGNSALFAGLQAGHHYCFVVGTVVRASSDQQGTATAPAVCTVAP
Ga0207708_108906741	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ELGGQVQQEHSVGPAGNSALFAGLQAGHHYCFVVGTVVRASSDQQGTATAPAVCTVAP
Ga0207683_116070432	3300026121	Miscanthus Rhizosphere	PSRTVDVIAFIVVAELGGQVQQEHTVGPAGNSALFAGLQAGHHYCFVVGTVVRASSGQQGTATAPAVCTVAP
Ga0209469_11290891	3300026307	Soil	PGQQARYQVTRVQVAARPHGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGRRYCFVVGTVVKSASGQQGTATTPAVCTLVR
Ga0257147_10152231	3300026475	Soil	FIVVAELGGRAQQEHTVGPAGSSVLFGGLQAGHRYCFVVGTVVKSASGQQGTATAPAVCTLVR
Ga0209465_102775171	3300027874	Tropical Forest Soil	GAIAFIVVAELGGRAQQEHTVGPAGHSAVFMGLRPGRRYCFVVGTVVKPASGQATTATAPAVCKVIR
Ga0307282_105695992	3300028784	Soil	DPSPAARATPAASPVLPGQQVRYQATRIRVTARPRGMRVRWSPPSRTVDVIAFVVVAEIDGRVQQEYTVGPAGNSALFGGLQAGHHYCFVVGTVVRASSGQQGTATAPAVCTVAA
Ga0307312_109061472	3300028828	Soil	VAARPRGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFGGLQAGHRYCFVVGTVVKSASGQQGTATAPAVCTLVP
Ga0318534_102459613	3300031544	Soil	AQQEHTVGPAGNSALFAGLQDGRRYCFVVGTVVQSASGQQGTATAPAVCTVAR
Ga0307372_101106154	3300031671	Soil	AEQAQYQVTRVRVVARPGGARVRWARPARTGGVTAFIVVAELGGRAEQEHTVGSTGHGAVFAGLRRGHRYCFVVGTVVETAAGQAGTATAPAVCSVIRG
Ga0307372_104618571	3300031671	Soil	YQVTRVRVVARPDGARVRWARPARTGGVTAFIVVAELGGRAEQEHTVGSTGHGAIFAGLRRGHRYCFVVGTVVETAAGQAGTATAPQVCSVVR
Ga0318561_100369881	3300031679	Soil	TGRPRPGGAVVRWSPPPHTAGVVAFIVLAELGGRAQQEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0306917_113518022	3300031719	Soil	QVTRVRVAARPRGMRVRWSPPSRTVDVVAFIVVAELGGRAQQEHTVGPAGNSALFAGLQDGRRYCFVVGTVVQSASGQQGTATAPAVCTVAR
Ga0307469_123974172	3300031720	Hardwood Forest Soil	ALPGQQARYQVTRVRVAARPRGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSTLFAGLQAGRRYCFVVGTVVKAASGQQGTATAPAVCTLVQ
Ga0318493_102331793	3300031723	Soil	YQVTRVRVAARPRGMRVRWSPPSRTVDVVAFIVVAELGGRAQQEHTVGPAGNSALFAGLQDGRRYCFVVGTVVQSASGQQGTATAPAVCTVAR
Ga0318500_101948963	3300031724	Soil	LHRTVDVVAFIVVAELGGRAQQEHTVGPAGNSALFAGLQDGRRYCFVVGTVVQSASGQQGTATAPAVCTVAR
Ga0318554_103781682	3300031765	Soil	YQVTRVRVAARPRGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGHRYCFVVGTVVRAASGQQGTATAPAVCTLVR
Ga0318521_103601791	3300031770	Soil	RGMRVRWSPPSRTIDVIAFIVVAELGGRAQQEHTVGPAGNSALFAGLQDGRRYCFVVGTVVQSASGQQGTATAPAVCTVAR
Ga0318546_103194411	3300031771	Soil	QQEHTVGPAGNSALFAGLQDGRRYCFVVGTVVQSASGQQGTATAPAVCTVAR
Ga0318543_102072861	3300031777	Soil	PRGMRVRWSPPSRTIDVIAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0318566_104849581	3300031779	Soil	AQYQVTRVRVAARPRGMRVRWSPPSRTVDVVAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0318508_11250261	3300031780	Soil	SPPSRTVDVVAFIVVAELGGRAQQEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0318547_105558802	3300031781	Soil	VCGGGAVVRWSPPPHTAGVVAFIVLAELGGRAQQEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0318557_100064686	3300031795	Soil	LGQAQQEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0318576_105697212	3300031796	Soil	QEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0318523_103043771	3300031798	Soil	RGMRVRWSPPSRTVDVVAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0318499_102201602	3300031832	Soil	IDVIAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTVAR
Ga0318511_103780022	3300031845	Soil	FTLTRAQPGDPSAASPALPGQQAQYQVTRVRVAARPRGMRVRWSPPSRTVDVVAFIVVAELGGRAQQEHTVGPAGNSALFAGLQDGRRYCFVVGTVVQSASGQQGTATAPAVCTVAR
Ga0318527_103551481	3300031859	Soil	RPGGAVVRWSPPPHTAGVVAFIVLAELGGRAQQEHTVGATGQRTVFAGLRAGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0318495_104162351	3300031860	Soil	ALYQVTRVRVAARPRGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGHRYCFVVGTVVRAASGQQGTATAPAVCTLVR
Ga0306925_102564061	3300031890	Soil	LPGQQTRYQVTRVRVAARPRGMRVRWSAPARTVNVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGRHYCFVVGTVVKAASGQQGTATAPAVCTLVR
Ga0310909_103850133	3300031947	Soil	EHTVGPAGNSSLFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0318531_102216541	3300031981	Soil	RPGGAAVRWSPPPHAAGVVAFIVLAELGGRAQQEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0318507_101962513	3300032025	Soil	PARTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGRHYCFVVGTVVKAASGQQGTATAPAVCTLVR
Ga0318549_105783722	3300032041	Soil	IDVIAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0318533_113467682	3300032059	Soil	AGVVAFIVLAELGGRAQQEHTVGATGHRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0318514_102418912	3300032066	Soil	VAPRPGGAAVRWSPPPHAAGVVAFIVLAELGGRAQQEHTVGATGQRTVFAGLRAGRRYCFVVGTVVESAGGQAGTATAPDVCRVIR
Ga0318514_106533821	3300032066	Soil	YQVTRVRVAARPRGMRVRWSPPSRTIDVIAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0318514_106799541	3300032066	Soil	VRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGHRYCFVVGTVVRAASGQQGTATAPAVCTLVR
Ga0318524_101575291	3300032067	Soil	PGDPPAASPALPGQQARYQVTRVRVAARPRGMRVRWSPPSRTVDVVAFIVVAELGGRAQQEHTVGPAGNSALFAGLQDGRRYCFVVGTVVQSASGQQGTATAPAVCTVAR
Ga0318524_102112041	3300032067	Soil	SRRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0307472_1009524142	3300032205	Hardwood Forest Soil	IAFIVVAELGGRAQEEHTVGPAGSSTLFAGLQAGHRYCFVVGTVVKAASGQQGTATAPAVCTFVR
Ga0307472_1015692441	3300032205	Hardwood Forest Soil	LGGQVQQEHTVGPAGNSALFAGLLAGHHYCFVVGTVVRASSGQQGTATAPAICTVTP
Ga0335085_102779161	3300032770	Soil	PAPPGQQARYQVTRVRVAARPGGMRVRWSPPSRTVDVIAFIVVAELGGRAQQEHTVGPAGKSAMFAGLQAGRHYCFVVGTVVQSASGQQGTATAPAVCTVAQ
Ga0335085_107088653	3300032770	Soil	SPAARATPAASPALPGQQARYQVTRVHAAARPLGIRVRWSPPSRTVDVIAFIVVAELGGRVQQEHTIGPGGHSAVFAGLQAGRRYCFVVGTVVKSASGQQRAATAPAVCAAAR
Ga0335082_112408441	3300032782	Soil	PPSRTVDVIAFIVIAELGGRAQQEHTVGPGGHSAAFPGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCMAAQ
Ga0335079_105229611	3300032783	Soil	PALPGQQARYQVTRVHVAARPLGMRVRWSPPSRTVDVIAFIVVAELGGRVQQEHTIGPGGHSAVFAGLQAGRRYCFVVGTVVKSASGQQRAATAPAVCAAAR
Ga0335078_105729033	3300032805	Soil	TPAASPALPGQQARYQVTRVHAAARPLGIRVRWSPPSRTVDVIAFIVVAELGGRVQQEHTIGPGGHSAVFAGLQAGRRYCFVVGTVVKSASGQQGTASAPAVCTAAR
Ga0335080_122592481	3300032828	Soil	LGGRAQQEHTVGPSGNSALFAGLQAGHRYCFVVGTVVKAPSGQQGTATAPAVCTVVR
Ga0335077_105032691	3300033158	Soil	EHTVGPGGHSAAFPGLQAGRRYCFVVGTVVKSASGQQGTATAPAVCMAAQ
Ga0318519_102947051	3300033290	Soil	SPALPGQQARYQVTRVRVAARPRGMRVRWSPPSRTIDVIAFIVVAELGGRAQQEHTVGPAGNSALFAGLQSGRRYCFVVGTVVRSASGQQGTATAPAVCTLAR
Ga0318519_109559642	3300033290	Soil	VIAFIVVAELGGRAQQEHTVGPAGSSALFAGLQAGRHYCFVVGTVVKAASGQQGTATAPAVCTLVR
Ga0314864_0091797_329_568	3300033805	Peatland	MRVRWSPPSRTVDVIAFIVVAELDGRAQQEHTVGPGGNSAVFAGLQADRRYCFVVGTVVKSASGQQGTATAPAVCTAAR
Ga0314865_182117_302_508	3300033806	Peatland	VDVIAFIVVAELGGRVQQEHTIGPGGHSAVFAGLQAGRRYCFVVGTVVKSASGQQGTASAPAVCAAAR
Ga0373950_0041515_723_881	3300034818	Rhizosphere Soil	QQEHTVGPAGNSALFAGLQAGHHYCFVVGTVVRASSGQQGTATAPAVCTVAP
Ga0373959_0006316_1712_1951	3300034820	Rhizosphere Soil	MRVRWSPPSRTVDVIAFIVVAELGGQVQQEHTVGPAGNSALFAGLLAGHHYCFVVGTVVRASSGQQGTATAPAVCTVAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081307

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences