Metagenome / Metatranscriptome Family F081301

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081301
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	137 residues
Representative Sequence	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPNVGTLATSLP
Number of Associated Samples	97
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.42 %
% of genes near scaffold ends (potentially truncated)	35.96 %
% of genes from short scaffolds (< 2000 bps)	82.46 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.421 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.158 % of family members)
Environment Ontology (ENVO)	Unclassified (58.772 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.807 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.08% β-sheet: 0.00% Coil/Unstructured: 38.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00011	HSP20	3.51
PF00072	Response_reg	2.63
PF03060	NMO	1.75
PF00589	Phage_integrase	1.75
PF12697	Abhydrolase_6	0.88
PF07589	PEP-CTERM	0.88
PF12146	Hydrolase_4	0.88
PF04831	Popeye	0.88
PF04616	Glyco_hydro_43	0.88
PF13173	AAA_14	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	3.51
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	1.75
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	1.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
All Organisms	root	All Organisms	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
cellular organisms	root	All Organisms → cellular organisms	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	15.79 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	3.51 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	13.16 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.51 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.88 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	3.51 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.51 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.75 %
Pleurocapsales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales	0.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.51 %
Rhizobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter	1.75 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	1.75 %
Aquabacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium	1.75 %
Dankookia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia	0.88 %
Xenococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Xenococcaceae	0.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.51 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1.75 %
unclassified Aquabacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium	1.75 %
unclassified Rhizobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter	1.75 %
Xenococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Xenococcaceae → Xenococcus	0.88 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.51 %
Rhizobacter sp. AJA081-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. AJA081-3	1.75 %
Aquabacterium sp. J223	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. J223	1.75 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1.75 %
unclassified Xenococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Xenococcaceae → Xenococcus → unclassified Xenococcus	0.88 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.42 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	3.51 %
Rhizobacter sp. AJA081-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. AJA081-3	1.75 %
Aquabacterium sp. J223	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. J223	1.75 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1.75 %
Xenococcus sp. PCC 7305	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Xenococcaceae → Xenococcus → unclassified Xenococcus → Xenococcus sp. PCC 7305	0.88 %
Dankookia rubra	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	0.88 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101787205	Not Available	678	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101790167	Not Available	581	Open in IMG/M
3300000956\|JGI10216J12902_102618310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2620	Open in IMG/M
3300002128\|JGI24036J26619_10038182	Not Available	922	Open in IMG/M
3300004114\|Ga0062593_100286741	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1391	Open in IMG/M
3300004156\|Ga0062589_100084178	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300004156\|Ga0062589_100506789	Not Available	1019	Open in IMG/M
3300004157\|Ga0062590_100814181	Not Available	861	Open in IMG/M
3300004463\|Ga0063356_100931055	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1231	Open in IMG/M
3300005327\|Ga0070658_10522127	Not Available	1027	Open in IMG/M
3300005328\|Ga0070676_10897835	Not Available	660	Open in IMG/M
3300005331\|Ga0070670_100115341	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300005331\|Ga0070670_100166775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1910	Open in IMG/M
3300005333\|Ga0070677_10426189	Not Available	705	Open in IMG/M
3300005335\|Ga0070666_10329606	Not Available	1090	Open in IMG/M
3300005343\|Ga0070687_100742581	Not Available	690	Open in IMG/M
3300005347\|Ga0070668_100025841	All Organisms → cellular organisms → Bacteria	4453	Open in IMG/M
3300005354\|Ga0070675_100372558	Not Available	1270	Open in IMG/M
3300005355\|Ga0070671_100635568	Not Available	924	Open in IMG/M
3300005355\|Ga0070671_100919729	Not Available	764	Open in IMG/M
3300005355\|Ga0070671_101400448	Not Available	618	Open in IMG/M
3300005356\|Ga0070674_100715004	Not Available	857	Open in IMG/M
3300005364\|Ga0070673_100003975	All Organisms → cellular organisms → Bacteria → Proteobacteria	9298	Open in IMG/M
3300005365\|Ga0070688_101257921	Not Available	596	Open in IMG/M
3300005365\|Ga0070688_101277032	Not Available	592	Open in IMG/M
3300005367\|Ga0070667_100778543	Not Available	888	Open in IMG/M
3300005455\|Ga0070663_101989925	Not Available	523	Open in IMG/M
3300005456\|Ga0070678_100235029	Not Available	1530	Open in IMG/M
3300005457\|Ga0070662_101412924	Not Available	600	Open in IMG/M
3300005459\|Ga0068867_100351863	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300005526\|Ga0073909_10202996	Not Available	858	Open in IMG/M
3300005543\|Ga0070672_100011966	All Organisms → cellular organisms → Bacteria → Proteobacteria	6067	Open in IMG/M
3300005543\|Ga0070672_101510614	Not Available	602	Open in IMG/M
3300005543\|Ga0070672_101683852	Not Available	570	Open in IMG/M
3300005547\|Ga0070693_101478757	Not Available	530	Open in IMG/M
3300005548\|Ga0070665_102307872	Not Available	541	Open in IMG/M
3300005564\|Ga0070664_100239048	Not Available	1630	Open in IMG/M
3300005578\|Ga0068854_100368358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1180	Open in IMG/M
3300005615\|Ga0070702_101566762	Not Available	544	Open in IMG/M
3300005616\|Ga0068852_100050393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3567	Open in IMG/M
3300005718\|Ga0068866_11473077	Not Available	500	Open in IMG/M
3300005719\|Ga0068861_100023981	All Organisms → cellular organisms → Bacteria → Proteobacteria	4406	Open in IMG/M
3300005842\|Ga0068858_102158678	Not Available	551	Open in IMG/M
3300005844\|Ga0068862_100393224	Not Available	1295	Open in IMG/M
3300006604\|Ga0074060_11634114	Not Available	786	Open in IMG/M
3300006881\|Ga0068865_100020240	All Organisms → cellular organisms → Bacteria	4315	Open in IMG/M
3300009094\|Ga0111539_11603879	Not Available	755	Open in IMG/M
3300009148\|Ga0105243_10790968	Not Available	934	Open in IMG/M
3300009176\|Ga0105242_11892981	Not Available	637	Open in IMG/M
3300009177\|Ga0105248_10584799	Not Available	1260	Open in IMG/M
3300009551\|Ga0105238_10416916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. AJA081-3	1337	Open in IMG/M
3300010400\|Ga0134122_10120047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Dankookia → Dankookia rubra	2105	Open in IMG/M
3300012893\|Ga0157284_10267771	Not Available	546	Open in IMG/M
3300012907\|Ga0157283_10146980	Not Available	690	Open in IMG/M
3300012908\|Ga0157286_10266777	Not Available	611	Open in IMG/M
3300012913\|Ga0157298_10236005	Not Available	610	Open in IMG/M
3300012951\|Ga0164300_10450339	Not Available	722	Open in IMG/M
3300012957\|Ga0164303_10639795	Not Available	707	Open in IMG/M
3300012960\|Ga0164301_10167624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter → unclassified Rhizobacter → Rhizobacter sp. AJA081-3	1364	Open in IMG/M
3300012961\|Ga0164302_11333144	Not Available	582	Open in IMG/M
3300012984\|Ga0164309_10799911	Not Available	759	Open in IMG/M
3300012985\|Ga0164308_10482661	Not Available	1033	Open in IMG/M
3300013297\|Ga0157378_10024609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5300	Open in IMG/M
3300013306\|Ga0163162_11604971	Not Available	742	Open in IMG/M
3300014325\|Ga0163163_11724922	Not Available	687	Open in IMG/M
3300014326\|Ga0157380_10197623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1781	Open in IMG/M
3300014969\|Ga0157376_10050780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3442	Open in IMG/M
3300015371\|Ga0132258_11845648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1523	Open in IMG/M
3300015373\|Ga0132257_101003158	Not Available	1050	Open in IMG/M
3300015374\|Ga0132255_103964433	Not Available	628	Open in IMG/M
3300015374\|Ga0132255_104556721	Not Available	587	Open in IMG/M
3300018476\|Ga0190274_10336928	Not Available	1426	Open in IMG/M
3300018476\|Ga0190274_10359399	Not Available	1390	Open in IMG/M
3300018476\|Ga0190274_10733493	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1037	Open in IMG/M
3300018481\|Ga0190271_10247607	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300023266\|Ga0247789_1065815	Not Available	686	Open in IMG/M
3300024055\|Ga0247794_10144089	Not Available	740	Open in IMG/M
3300025271\|Ga0207666_1011025	Not Available	1246	Open in IMG/M
3300025315\|Ga0207697_10072717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pleurocapsales → Xenococcaceae → Xenococcus → unclassified Xenococcus → Xenococcus sp. PCC 7305	1442	Open in IMG/M
3300025893\|Ga0207682_10013702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3157	Open in IMG/M
3300025893\|Ga0207682_10227984	Not Available	863	Open in IMG/M
3300025899\|Ga0207642_10035481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2131	Open in IMG/M
3300025901\|Ga0207688_10355903	Not Available	903	Open in IMG/M
3300025926\|Ga0207659_11012266	Not Available	715	Open in IMG/M
3300025930\|Ga0207701_10093275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	2706	Open in IMG/M
3300025930\|Ga0207701_11046255	Not Available	678	Open in IMG/M
3300025931\|Ga0207644_10207048	Not Available	1549	Open in IMG/M
3300025933\|Ga0207706_10127916	Not Available	2234	Open in IMG/M
3300025933\|Ga0207706_10236381	Not Available	1598	Open in IMG/M
3300025937\|Ga0207669_10621472	Not Available	880	Open in IMG/M
3300025938\|Ga0207704_10870172	Not Available	756	Open in IMG/M
3300025940\|Ga0207691_10110322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. J223	2447	Open in IMG/M
3300025940\|Ga0207691_10330702	Not Available	1306	Open in IMG/M
3300025945\|Ga0207679_10202294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1660	Open in IMG/M
3300025945\|Ga0207679_11565721	Not Available	604	Open in IMG/M
3300025960\|Ga0207651_10010257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Aquabacterium → unclassified Aquabacterium → Aquabacterium sp. J223	5182	Open in IMG/M
3300025972\|Ga0207668_10680805	Not Available	902	Open in IMG/M
3300025981\|Ga0207640_10365819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1164	Open in IMG/M
3300025986\|Ga0207658_10968226	Not Available	776	Open in IMG/M
3300026023\|Ga0207677_10447385	Not Available	1106	Open in IMG/M
3300026035\|Ga0207703_12422909	Not Available	500	Open in IMG/M
3300026118\|Ga0207675_100093443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	2829	Open in IMG/M
3300026121\|Ga0207683_10037762	All Organisms → cellular organisms → Bacteria	4207	Open in IMG/M
3300026121\|Ga0207683_11218548	Not Available	697	Open in IMG/M
3300026142\|Ga0207698_10035279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3657	Open in IMG/M
3300027821\|Ga0209811_10132256	Not Available	916	Open in IMG/M
3300031170\|Ga0307498_10136430	Not Available	799	Open in IMG/M
3300031538\|Ga0310888_11015227	Not Available	522	Open in IMG/M
3300031847\|Ga0310907_10268823	Not Available	846	Open in IMG/M
3300031908\|Ga0310900_10725579	Not Available	798	Open in IMG/M
3300031939\|Ga0308174_10730263	All Organisms → cellular organisms → Bacteria → Proteobacteria	828	Open in IMG/M
3300031944\|Ga0310884_10187104	Not Available	1096	Open in IMG/M
3300032075\|Ga0310890_10148971	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1545	Open in IMG/M
3300033550\|Ga0247829_10598483	Not Available	916	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	61.40%
Environmental	Environmental	38.60%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	61.40%
Terrestrial	Environmental → Terrestrial	38.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.81%
Roots	Host-Associated → Plants → Roots	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	30.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.02%
Loam	Environmental → Terrestrial → Soil → Loam	4.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.51%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	30.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.02%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	12.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	11.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.51%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.51%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.63%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017872052	3300000364	Soil	MRPLDPSSLRPTPSVGGIPAAGAVIADDAETGGNTAPQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDXKTKEAVRRIAQANADIAALADPRSDASTYXAILARCAPVS
INPhiseqgaiiFebDRAFT_1017901672	3300000364	Soil	MRPLDPSSLRPTPSVGGIPAAGAVIADDAETGGNTAPQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSP
JGI10216J12902_1026183103	3300000956	Soil	MRPSDTSSLRPAPSMSGIPATGGVVAGNAETYSDATAQQLKNRLLAELAEWRALHRRFAPGQVWLEGRIAFSKEAQRADLEIRKLELDRKAKEAERRIAQANADIAALADPSSDASTYHAILTRLTGTVEPVASGEARRTRPTRC*
JGI24036J26619_100381821	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVXRIAQANADIAALADPRSDASTYHXILARVLQSPNVGTLATSLP*
Ga0062593_1002867411	3300004114	Soil	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTARREGAQLQVG*
Ga0062589_1000841781	3300004156	Soil	MQHAKSPILRPAPSAADTPAGGGVVADNPETGGSTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAEQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG*
Ga0062589_1005067891	3300004156	Soil	MRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAGRIG*
Ga0062590_1008141811	3300004157	Soil	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0063356_1009310552	3300004463	Arabidopsis Thaliana Rhizosphere	MQHAKSPILRPAPSAADTPAGGGVVADNPETGGSTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAKQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG*
Ga0070658_105221271	3300005327	Corn Rhizosphere	MRHANSPILPAAPYVARIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAGRIG*
Ga0070676_108978351	3300005328	Miscanthus Rhizosphere	MQHAKSPILRPAPSAAGTRTGGADVADNSETGGSTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAEQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG*
Ga0070670_1001153412	3300005331	Switchgrass Rhizosphere	VQHAKSPIPRAASSVAGMPAAGAVVANNPETGGNTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALADPRFDASIYYAILARVLRSHKVGTVVTSSHEVARMSKP*
Ga0070670_1001667754	3300005331	Switchgrass Rhizosphere	IPAAGAVVVDHPQAGGSTAAQQLQLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP*
Ga0070677_104261891	3300005333	Miscanthus Rhizosphere	ASSVAGIPAADAVVADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLQARKLELDGQTKDAVRRIAQANADIAALADPRFDASIYHAILARVLRSHKVGTVVTSPHEVARMSKP*
Ga0070666_103296061	3300005335	Switchgrass Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP*
Ga0070687_1007425811	3300005343	Switchgrass Rhizosphere	RAKGSLGRCDIVRFARDPRCSNCRPSPRRLRTSIRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0070668_1000258414	3300005347	Switchgrass Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVGRIAQANADIAALADPRSDASTYHTILARVLQSPNVGTLATSLP*
Ga0070675_1003725581	3300005354	Miscanthus Rhizosphere	MQHAKFPILRPASSVAGIPAADAVVADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALADPRFDASIYHAILARVLRSHKVGTVVTSSHEVARMSKP*
Ga0070671_1006355682	3300005355	Switchgrass Rhizosphere	AGAVVVDHRQAGGSTSAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP*
Ga0070671_1009197292	3300005355	Switchgrass Rhizosphere	MRLPESPSLRPTLSVGGIPPAGAVIANDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0070671_1014004481	3300005355	Switchgrass Rhizosphere	VQHAKSPILRAASSVAGIPAAGTVVADNPETGGNTAAQQLKHRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQKGDLEARKLELDGQTKDAVRRIAQVNADIAALADPRSDASTYHAILTRVLQSHKVDTVVTSLP*
Ga0070674_1007150041	3300005356	Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPNVGTLATSLP*
Ga0070673_1000039752	3300005364	Switchgrass Rhizosphere	MRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP*
Ga0070688_1012579212	3300005365	Switchgrass Rhizosphere	LRPSMRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP*
Ga0070688_1012770321	3300005365	Switchgrass Rhizosphere	MQHAKFPILRLASSVAGIPAADAVVADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALADPRFDASIY
Ga0070667_1007785431	3300005367	Switchgrass Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSVNP*
Ga0070663_1019899251	3300005455	Corn Rhizosphere	VQHAKSPILRAASSVAGISAAGAVVADNPETGGNTAAQQLKHRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQKGDLEARKLELDGKTKDAMRRMAQASVDITALTDPRSDASTYHAILARVLQSHKVDTVVTSHP*
Ga0070678_1002350291	3300005456	Miscanthus Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAGRIG*
Ga0070662_1014129241	3300005457	Corn Rhizosphere	ADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALADPRFDASIYYAILARVLRSHKVGTVVTSSHEVARMSKP*
Ga0068867_1003518631	3300005459	Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*SGADEQALSAA
Ga0073909_102029962	3300005526	Surface Soil	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGSTAAQQLKGQLQAELAEWRALHNKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILARVLQSPSVGYIGHFPPMKRRG*
Ga0070672_1000119664	3300005543	Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPNVGTLATSLP*
Ga0070672_1015106141	3300005543	Miscanthus Rhizosphere	MRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSGASACHAIL
Ga0070672_1016838521	3300005543	Miscanthus Rhizosphere	VQHAKSPIPRAASSFAGIPAAGAVVAGNSDIGGNAAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQKGDLEARKLELDGKTKDAMRRMAQASVDITALTDPRSDASTYHAILARVLQSHKLTPWSLPIHEVARMSKPEHCGKSLIPLATDRPTRKGKWRTSALSV
Ga0070693_1014787571	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VQHAKSPILRAASPVAGIPAAGAVVADNPETGGRTATQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQKGDFEARKLELDAETKDAVRRMAQAHADIAALADPRSDASTYHAILARVRQSHKVDTVV
Ga0070665_1023078721	3300005548	Switchgrass Rhizosphere	AGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0070664_1002390484	3300005564	Corn Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAEGSANP*
Ga0068854_1003683581	3300005578	Corn Rhizosphere	MRLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0070702_1015667621	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVARIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILARVLQSPSVGYIGHFPPMKRRG*
Ga0068852_1000503933	3300005616	Corn Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0068866_114730771	3300005718	Miscanthus Rhizosphere	SVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0068861_1000239814	3300005719	Switchgrass Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVGRIAQANADIAALADPRSDASTYHTILARVLQSPNVGTLATSLP*
Ga0068858_1021586781	3300005842	Switchgrass Rhizosphere	APYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAGRIG*
Ga0068862_1003932242	3300005844	Switchgrass Rhizosphere	MRPLDPSSLRPTPSVGGIPAAGAVIADDAETGGNTAPQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVGRIAQANADIAALADPRSDASTYHTILARVLQSPNVGTLATSLP*
Ga0074060_116341141	3300006604	Soil	MRPLDPSSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLRGQLQAELAEWRALHHKLEPAQVWLEGCIAFSQEAQKADLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILVLRRNADRPA*
Ga0068865_1000202402	3300006881	Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSANVGTLATSLP*
Ga0111539_116038791	3300009094	Populus Rhizosphere	MQHAKFPILRPASSVAGIPAADAVVADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQKGDLEARKLELDGETADAVRRMAQANADIAALADPRSDASTYHAILARVLQSRKVDTVL
Ga0105243_107909682	3300009148	Miscanthus Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSANVGTLA
Ga0105242_118929811	3300009176	Miscanthus Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGSTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLGARKLELDGKTKEAVRRIAQANADLAALADPRSDAFTYHAILTRVLQSPNVGTLA
Ga0105248_105847992	3300009177	Switchgrass Rhizosphere	LRTSIRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTMEAVRRIAQANADIAALADPRSDASTYHAILARMLQSPNVGTLATSLP*
Ga0105238_104169162	3300009551	Corn Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0134122_101200474	3300010400	Terrestrial Soil	MGPLEPPGLLHTLSIPGIPPAGGEAETGTKAATQHLEGQLQAELAEWRALYRKFAPAQGWLEGRIAFSQGAQKADLELKKLEVDRKAKEAERHMAQADADIAALADPRSDASTYLTILARQKSALKFD*
Ga0157284_102677712	3300012893	Soil	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLA
Ga0157283_101469801	3300012907	Soil	SPIPRAASSVAGMPAAGAVVANNPETGGNTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAEQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG*
Ga0157286_102667771	3300012908	Soil	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAEQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG*
Ga0157298_102360051	3300012913	Soil	MQLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKAKEAVRRIAQANADIAALADPRSDASTYHA
Ga0164300_104503391	3300012951	Soil	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRAIHHKLEPAQVWLEGRIAFSQEAQKAELEARKLELDGKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPSVGYIGHFPPMKRRG*
Ga0164303_106397951	3300012957	Soil	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGSTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0164301_101676242	3300012960	Soil	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILARVLQSPSVGYIGHFPPMKRRG*
Ga0164302_113331441	3300012961	Soil	GAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILARMLQSPSVGYIGHFPPMKRRR*
Ga0164309_107999112	3300012984	Soil	MRPLDPSSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKETVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0164308_104826611	3300012985	Soil	MQLPESPSLRPTPSIGGIPAAGAVIANDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILARVLQSPSVGYIGHFPPMKRRG*
Ga0157378_100246096	3300013297	Miscanthus Rhizosphere	MQLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0163162_116049711	3300013306	Switchgrass Rhizosphere	MRLPESPSRRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPNVGTLATSLP*
Ga0163163_117249222	3300014325	Switchgrass Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVARIPAAGAVVVDHPQAGGSTAAQQLQLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAGR
Ga0157380_101976231	3300014326	Switchgrass Rhizosphere	MRPLDPSSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHTILARVLQSPNVGTLATSLP*
Ga0157376_100507803	3300014969	Miscanthus Rhizosphere	LRTSIRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0132258_118456483	3300015371	Arabidopsis Rhizosphere	MQLPESPSLRPTPSIGGIPAAGGVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0132257_1010031582	3300015373	Arabidopsis Rhizosphere	MQLPESPSLWPTPSIGGIPAAGVVIADDAETGGNSAAQQLKGQLQAELAEWRTLHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILARVLQSPSVGYIGHFPPMKRRG*
Ga0132255_1039644331	3300015374	Arabidopsis Rhizosphere	MQLPESPSLRPTPSIGGIPAAGGVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKAHLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILARLTSTDEMVAVRKGEVL*
Ga0132255_1045567211	3300015374	Arabidopsis Rhizosphere	MRPLDPSSLRPTPLVTCIPATGGVVASDAETDSNAAAQQLKNQLQAELAEWRALQRKLAPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAARRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP*
Ga0190274_103369282	3300018476	Soil	MLLPESPSLRPTPSVGGIPAAGAIIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPNVGTLATSLP
Ga0190274_103593992	3300018476	Soil	MRLLDSSGLRPAPSLDAIRAAGAIIPNDDETGGNTAAQQLKGQLRTELAEWRTLYRKLEPAQAWLEGGIAFSQGAQRADLEVRKLELDRKAKEAERRIAQANADIAALANPSSDASTYHTILARLTSTVELVAVPKGEVF
Ga0190274_107334932	3300018476	Soil	MQHAKSPILRPAPSAADTPAGGGVVADNPETGGSTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAEQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG
Ga0190271_102476072	3300018481	Soil	MRLPESPSLRPTPSVGGIPAAGAVIADDAEIGGNTAAQKLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAVRRIAQANADIAALADPRSDASTYRAILARVLQSPNVGTLATSLP
Ga0247789_10658151	3300023266	Soil	MQHAKSPILRPAPSAAGTPTGGADVADNPETGGSTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAEQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG
Ga0247794_101440891	3300024055	Soil	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP
Ga0207666_10110252	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSANVGTLATSLP
Ga0207697_100727172	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP
Ga0207682_100137024	3300025893	Miscanthus Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYYAILARVLPGSQRWHIDHFPPMKRRG
Ga0207682_102279841	3300025893	Miscanthus Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRQAGGSTSAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP
Ga0207642_100354813	3300025899	Miscanthus Rhizosphere	MLLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP
Ga0207688_103559031	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQVHANIAALADPRPDASTDPGPCAPVSLRWPQCPLPSHEVA
Ga0207659_110122661	3300025926	Miscanthus Rhizosphere	MQHAKFPILRPASSVAGIPAADAVVADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALADPRFDASIYHAILARVLRSHKVGTVVTSSHEVARMSKP
Ga0207701_100932752	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHTILARVLQSPNVGTLATSLP
Ga0207701_110462551	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	AGIPAADAVVADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALADPRFDASIYHAILARVLRSHKVGTVVTSSHEVARMSKP
Ga0207644_102070483	3300025931	Switchgrass Rhizosphere	MRLPESPSLRPTLSVGGIPPAGAVIANDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP
Ga0207706_101279165	3300025933	Corn Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP
Ga0207706_102363812	3300025933	Corn Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP
Ga0207669_106214722	3300025937	Miscanthus Rhizosphere	MQHAKFPILRPASSVAGIPAADAVVADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALADPRFDASIYYAILARVLRSHKVGTVVTSSHEVARMSKP
Ga0207704_108701722	3300025938	Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSANVGTLATSLP
Ga0207691_101103225	3300025940	Miscanthus Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPNVGTLATSLP
Ga0207691_103307021	3300025940	Miscanthus Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILD
Ga0207679_102022941	3300025945	Corn Rhizosphere	VQHAKSPIPRAASSVAGMPAAGAVVANNPETGGNTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALAGPLFDASI
Ga0207679_115657211	3300025945	Corn Rhizosphere	RLRPSMRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAGRIG
Ga0207651_100102571	3300025960	Switchgrass Rhizosphere	MRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSANP
Ga0207668_106808051	3300025972	Switchgrass Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP
Ga0207640_103658192	3300025981	Corn Rhizosphere	TPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEEQKASLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP
Ga0207658_109682262	3300025986	Switchgrass Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSGASACHAILDRAEGSVNP
Ga0207677_104473851	3300026023	Miscanthus Rhizosphere	MRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRKLAPAQVWLEGRIAFSQEAQKADLEARKRELDGKTKEAERRMKQVNADIAVLADPLSGAS
Ga0207703_124229091	3300026035	Switchgrass Rhizosphere	LRPSMRKLSTIIPTLEASMRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAGRIG
Ga0207675_1000934435	3300026118	Switchgrass Rhizosphere	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVGRIAQANADIAALADPRSDASTYHTILARVLQSPNVGTLATSLP
Ga0207683_100377625	3300026121	Miscanthus Rhizosphere	MRHANSPILPAAPYVAGIPAAGAVVVDHRKAGGSTAAQQLKLRLQAELAECRALYRRLAPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAERRMKQVNADIAVLADPLSSASACHAILDRAGRIG
Ga0207683_112185481	3300026121	Miscanthus Rhizosphere	MQHAKFPILRPASSVAGIPAADAVVADNPETGGDTAAQQLRRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQNGDLEARKLELDGQTKDAVRRIAQANADIAALADPRFDA
Ga0207698_100352796	3300026142	Corn Rhizosphere	MQLPESPSLRPTPSIGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP
Ga0209811_101322561	3300027821	Surface Soil	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGSTAAQQLKGQLQAELAEWRALHNKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKETVRRIAQANADIAALADPRSDASTYHAILARVLQSPSVGYIGHFPPMKRRG
Ga0307498_101364301	3300031170	Soil	MRLPESPSLRPTPSVGGIPAARAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDEKTKETVRRIAQANADIATLADPRSDASTYDAILARVLQSPSVGTLATSLP
Ga0310888_110152271	3300031538	Soil	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPNVGTLATSLP
Ga0310907_102688231	3300031847	Soil	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLKGQLQAELAEWRALHHKLVPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPRSDASTYHAILARVLQSPNVGTLATSLP
Ga0310900_107255791	3300031908	Soil	MRPLDPSSLRPTPSVGGIPAAGAVIADDAETGGNTAPQQLKGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDGKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSPNVGTLATSLP
Ga0308174_107302631	3300031939	Soil	VQHANSPIPRAAPSVAGIPAAGAVVADNPATGGNTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSQEAQKGDFEARKLELDGETKDALRRIAQAHADIAALADPC
Ga0310884_101871041	3300031944	Soil	MQHAKSPILRPAPSAAGTPTGGADVADNPETGGSTAAQQLKRRLQAEMADCRALYRKLAPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAEQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG
Ga0310890_101489712	3300032075	Soil	MQHAKSPILRPAPSAAGTPTGGADVADNSETGGSTAAQQLKRRLQAEMAECRALYRKLAPAQVWLEGRIAFSHEAQKADLEVQKLELDRKVKEAEQRIAQAHADIAALADPSSDASTYHTARREGAQLQVG
Ga0247829_105984832	3300033550	Soil	MRLPESPSLRPTPSVGGIPAAGAVIADDAETGGNTAAQQLEGQLQAELAEWRALHHKLEPAQVWLEGRIAFSQEAQKADLEARKLELDRKTKEAVRRIAQANADIAALADPSSDASTYHTILARVLQSANVGTLATSLPRSGADEQALSAAASR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081301

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences