Metagenome / Metatranscriptome Family F081166

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081166
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	85 residues
Representative Sequence	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Number of Associated Samples	93
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.95 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	95.61 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (29.825 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.404 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.61% β-sheet: 6.52% Coil/Unstructured: 60.87%
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00484	Pro_CA	3.51
PF12681	Glyoxalase_2	2.63
PF00903	Glyoxalase	2.63
PF01548	DEDD_Tnp_IS110	0.88
PF08309	LVIVD	0.88
PF02371	Transposase_20	0.88
PF13474	SnoaL_3	0.88
PF01527	HTH_Tnp_1	0.88
PF00005	ABC_tran	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	3.51
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.75
COG5276	Uncharacterized secreted protein, contains LVIVD repeats, choice-of-anchor domain	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	80.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.63 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	80.70 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	80.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.75 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	80.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.75 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16598660	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1191	Open in IMG/M
2209111006\|2214818833	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	669	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1012691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1321	Open in IMG/M
3300000650\|AP72_2010_repI_A1DRAFT_1013080	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	678	Open in IMG/M
3300002568\|C688J35102_120697581	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1372	Open in IMG/M
3300004157\|Ga0062590_102135242	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	585	Open in IMG/M
3300004463\|Ga0063356_105317177	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	553	Open in IMG/M
3300005175\|Ga0066673_10139466	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1340	Open in IMG/M
3300005179\|Ga0066684_10412373	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	907	Open in IMG/M
3300005277\|Ga0065716_1007929	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	731	Open in IMG/M
3300005289\|Ga0065704_10039918	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005289\|Ga0065704_10179186	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1235	Open in IMG/M
3300005294\|Ga0065705_10720143	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	639	Open in IMG/M
3300005294\|Ga0065705_10783552	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005295\|Ga0065707_10571616	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	706	Open in IMG/M
3300005332\|Ga0066388_104428376	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	716	Open in IMG/M
3300005450\|Ga0066682_10639020	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	663	Open in IMG/M
3300005467\|Ga0070706_101926563	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	536	Open in IMG/M
3300005560\|Ga0066670_10279796	All Organisms → cellular organisms → Bacteria → Proteobacteria	1014	Open in IMG/M
3300005713\|Ga0066905_101495709	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	614	Open in IMG/M
3300005764\|Ga0066903_100226668	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2843	Open in IMG/M
3300005764\|Ga0066903_100570046	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300005764\|Ga0066903_100595928	All Organisms → cellular organisms → Bacteria → Proteobacteria	1913	Open in IMG/M
3300005764\|Ga0066903_100654321	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1838	Open in IMG/M
3300005764\|Ga0066903_100738376	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300005764\|Ga0066903_101583382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1241	Open in IMG/M
3300005764\|Ga0066903_107462052	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	564	Open in IMG/M
3300005937\|Ga0081455_10274833	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1220	Open in IMG/M
3300006031\|Ga0066651_10346920	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	796	Open in IMG/M
3300006049\|Ga0075417_10545898	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	586	Open in IMG/M
3300006791\|Ga0066653_10076535	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1464	Open in IMG/M
3300006844\|Ga0075428_101825789	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	632	Open in IMG/M
3300006854\|Ga0075425_101714278	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	707	Open in IMG/M
3300006871\|Ga0075434_101428652	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	702	Open in IMG/M
3300006904\|Ga0075424_100746600	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300007076\|Ga0075435_101761106	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	544	Open in IMG/M
3300009100\|Ga0075418_10169855	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2322	Open in IMG/M
3300009137\|Ga0066709_104242139	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	522	Open in IMG/M
3300009147\|Ga0114129_10473714	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1639	Open in IMG/M
3300009147\|Ga0114129_11096012	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300009792\|Ga0126374_10111995	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1575	Open in IMG/M
3300009792\|Ga0126374_11034863	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	646	Open in IMG/M
3300009792\|Ga0126374_11407975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300010043\|Ga0126380_10291601	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1155	Open in IMG/M
3300010325\|Ga0134064_10095004	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	974	Open in IMG/M
3300010326\|Ga0134065_10124649	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	878	Open in IMG/M
3300010333\|Ga0134080_10527180	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	565	Open in IMG/M
3300010358\|Ga0126370_12257744	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	537	Open in IMG/M
3300010359\|Ga0126376_10551757	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1079	Open in IMG/M
3300010359\|Ga0126376_11587873	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	686	Open in IMG/M
3300010360\|Ga0126372_13020488	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	522	Open in IMG/M
3300010361\|Ga0126378_11074551	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	906	Open in IMG/M
3300010361\|Ga0126378_12499519	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	590	Open in IMG/M
3300010364\|Ga0134066_10030575	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1269	Open in IMG/M
3300010366\|Ga0126379_10782934	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1052	Open in IMG/M
3300010373\|Ga0134128_10986129	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	932	Open in IMG/M
3300010376\|Ga0126381_102337521	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	767	Open in IMG/M
3300010398\|Ga0126383_10731985	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1069	Open in IMG/M
3300010398\|Ga0126383_11657553	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	729	Open in IMG/M
3300012198\|Ga0137364_10245216	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1323	Open in IMG/M
3300012201\|Ga0137365_10113318	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300012469\|Ga0150984_116951765	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1830	Open in IMG/M
3300012899\|Ga0157299_10308737	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	527	Open in IMG/M
3300012951\|Ga0164300_10526403	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	682	Open in IMG/M
3300012971\|Ga0126369_11259208	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	830	Open in IMG/M
3300012971\|Ga0126369_13474696	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	516	Open in IMG/M
3300012977\|Ga0134087_10091509	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1262	Open in IMG/M
3300012985\|Ga0164308_10331215	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1221	Open in IMG/M
3300012988\|Ga0164306_10365992	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1073	Open in IMG/M
3300013096\|Ga0157307_1156394	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	534	Open in IMG/M
3300014157\|Ga0134078_10109638	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1043	Open in IMG/M
3300014166\|Ga0134079_10083272	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1191	Open in IMG/M
3300015077\|Ga0173483_10178222	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	961	Open in IMG/M
3300015371\|Ga0132258_13934944	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1009	Open in IMG/M
3300016270\|Ga0182036_10399061	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1071	Open in IMG/M
3300016294\|Ga0182041_12160376	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	520	Open in IMG/M
3300016371\|Ga0182034_10778127	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	818	Open in IMG/M
3300016445\|Ga0182038_10355177	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1216	Open in IMG/M
3300018072\|Ga0184635_10246431	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	708	Open in IMG/M
3300018073\|Ga0184624_10083819	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300018433\|Ga0066667_11260754	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	645	Open in IMG/M
3300021560\|Ga0126371_11315365	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	856	Open in IMG/M
3300021560\|Ga0126371_11390038	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	833	Open in IMG/M
3300021560\|Ga0126371_12218255	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	663	Open in IMG/M
3300025916\|Ga0207663_11232000	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	603	Open in IMG/M
3300025926\|Ga0207659_11386186	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	603	Open in IMG/M
3300026312\|Ga0209153_1212829	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	659	Open in IMG/M
3300026316\|Ga0209155_1141585	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	814	Open in IMG/M
3300027874\|Ga0209465_10050816	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300028597\|Ga0247820_11218416	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	544	Open in IMG/M
3300030846\|Ga0075403_10470025	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	550	Open in IMG/M
3300030916\|Ga0075386_12135127	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	859	Open in IMG/M
3300030945\|Ga0075373_11521872	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	571	Open in IMG/M
3300031198\|Ga0307500_10032016	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300031231\|Ga0170824_109843382	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	643	Open in IMG/M
3300031231\|Ga0170824_125004262	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	586	Open in IMG/M
3300031446\|Ga0170820_10556519	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	695	Open in IMG/M
3300031573\|Ga0310915_10158108	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300031573\|Ga0310915_11145624	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031719\|Ga0306917_10080456	All Organisms → cellular organisms → Bacteria	2287	Open in IMG/M
3300031736\|Ga0318501_10353451	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	790	Open in IMG/M
3300031744\|Ga0306918_10442328	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1015	Open in IMG/M
3300031781\|Ga0318547_10628949	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	666	Open in IMG/M
3300031890\|Ga0306925_10510654	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1279	Open in IMG/M
3300031912\|Ga0306921_10253219	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300031912\|Ga0306921_10309417	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1849	Open in IMG/M
3300031945\|Ga0310913_10223743	All Organisms → cellular organisms → Bacteria → Proteobacteria	1318	Open in IMG/M
3300031945\|Ga0310913_10571316	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	802	Open in IMG/M
3300032001\|Ga0306922_10959173	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	885	Open in IMG/M
3300032042\|Ga0318545_10243987	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300032052\|Ga0318506_10468059	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300032261\|Ga0306920_102313445	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	744	Open in IMG/M
3300033289\|Ga0310914_10536981	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1057	Open in IMG/M
3300033551\|Ga0247830_10815938	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	742	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.21%
Host-Associated	Host-Associated	15.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.46%
Plants	Host-Associated → Plants	15.79%
Aquatic	Environmental → Aquatic	1.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.14%
Sediment	Environmental → Aquatic → Sediment	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.30%
Loam	Environmental → Terrestrial → Soil → Loam	13.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.88%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.39%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000650	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A1	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300030846	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01900080	2088090014	Soil	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAVYEESPLTELMNAGLVGQWGGGRTFALTAXXXXXXXXXXXVPLPEKKEVWIDPRDGEQYG
2213854088	2209111006	Arabidopsis Rhizosphere	MNKPGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
AP72_2010_repI_A01DRAFT_10126911	3300000579	Forest Soil	MLLMLAVNGEMNQADLTAVHEESPLTELLNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRNGEQYG*
AP72_2010_repI_A1DRAFT_10130801	3300000650	Forest Soil	EMLMLLMLAVNGEMNQADLTAVHEESPLTELLNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRNGEQYG*
C688J35102_1206975811	3300002568	Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGPWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0062590_1021352421	3300004157	Soil	MLLMLAVNGEMNQADLTAVYEESSLTQLMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0063356_1053171771	3300004463	Arabidopsis Thaliana Rhizosphere	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYMEMICRVPLPEKKEVWIDPR
Ga0066673_101394662	3300005175	Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQAELTAVAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066684_104123732	3300005179	Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQAELTAVAGYQESSLSQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGE
Ga0065716_10079291	3300005277	Arabidopsis Rhizosphere	MNKPGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0065704_100399182	3300005289	Switchgrass Rhizosphere	MLLMLAVNGEMNQADLTAVHEESPHTQLMNAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0065704_101791861	3300005289	Switchgrass Rhizosphere	MNTLGYRTPEPEILMLLMLAVNGEMNQADLTALHDETPHTQLINAGLIEQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDG
Ga0065705_107201431	3300005294	Switchgrass Rhizosphere	MNTLGYRTPEPEILMLLMLAVNGEMNQADLTALHDETPHTQLINAGLIEQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0065705_107835521	3300005294	Switchgrass Rhizosphere	MLLMLAVNGEMNQADLTAVHEESPHTQLINAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0065707_105716162	3300005295	Switchgrass Rhizosphere	MNKQGYRTPEPEILMLLMLAVNGEMNQADLTAVHEESPLTQLINAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066388_1044283762	3300005332	Tropical Forest Soil	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAIHEESPLTELMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEIWIDPRDGEQYG*
Ga0066682_106390201	3300005450	Soil	MNKQGYRTPEPEILMLSMLGVNGEMNQAELTAVAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKQEVWIDPRDGEQYG*
Ga0070706_1019265631	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNKQGYRNPEPEILTLLMLAVNGEMNQADSTAEHEESQLTELMNAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWI
Ga0066670_102797962	3300005560	Soil	MLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066905_1014957092	3300005713	Tropical Forest Soil	MNKQGYRKPEPEILMLLMLAVNGEMNQVDLTAVYEESALTESMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066903_1002266686	3300005764	Tropical Forest Soil	MNKQGYRTPEPELLVLLMLAVNGEMNQADLAAVYEERPFTELMDAGLVDQWGGGRTFKLTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066903_1005700462	3300005764	Tropical Forest Soil	MNKQGYRTPESEILMLLMLAVNGEMNQADLTPVYEESALTQLMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066903_1005959283	3300005764	Tropical Forest Soil	MNKQGYRKPEPEILILVMLAVKGEMNQTDLTAVCEASPLTELMNAGLVGEWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066903_1006543211	3300005764	Tropical Forest Soil	MNKQGYRKPEPEILMLVMLAVNGEMNQADLTAVYEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDG
Ga0066903_1007383763	3300005764	Tropical Forest Soil	MLLMLAVNGEMNQADLTAVYEESSLTQLMNAGLVGQWGGGRTFALTAKGKAYAEMVCRVPLPEKKEVWIDPRDGEQYG*
Ga0066903_1015833821	3300005764	Tropical Forest Soil	MNKQGYRKPEPEILMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066903_1074620522	3300005764	Tropical Forest Soil	MNKQGYRTPDSELLMLLMLAVNGEMNQADLTAVYEENSLTQLMNAGLVSQWGGNRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0081455_102748333	3300005937	Tabebuia Heterophylla Rhizosphere	MLVTLAVNGEMNQADLTAVYEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066651_103469202	3300006031	Soil	MLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGPWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0075417_105458982	3300006049	Populus Rhizosphere	MLLMLAVNGEMNQADLTAVYEESALTQSMNAGLVDQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066653_100765352	3300006791	Soil	MLSMLGVNGEMNQAELTAVAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0075428_1018257891	3300006844	Populus Rhizosphere	MLLMLAVNGEMNQADLTAVYEESSLTQLMNAGLVGQWGGGRTFALTAKGKAYAEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0075425_1017142781	3300006854	Populus Rhizosphere	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPL
Ga0075434_1014286522	3300006871	Populus Rhizosphere	MLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0075424_1007466001	3300006904	Populus Rhizosphere	MNKQGYRTPESELLMLLMLAVNGEMNQADLTAVYEESSLTQLMNAGLVGQWGGGRTFALTAKGKAYAEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0075435_1017611061	3300007076	Populus Rhizosphere	MLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0075418_101698553	3300009100	Populus Rhizosphere	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAVYEETPLTELMNAGLIGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0066709_1042421391	3300009137	Grasslands Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGPWGGGRTFALTAKGKAYVEMICRVPLPEKKE
Ga0114129_104737141	3300009147	Populus Rhizosphere	GYRKPEPEMLMLLMLAVNGEMNQADLTAVYEETPLTELMNAGLIGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0114129_110960123	3300009147	Populus Rhizosphere	MNKQGYRTPESELLMLLMLAVNGEMNQADLTAVYEESSLTQLMNAGLVGQWGGGRTFALTAKGKAYAEMICRVPLPEKKEVWIDPRDGEQ
Ga0126374_101119951	3300009792	Tropical Forest Soil	MLLMLAVNGEMNQADLTAVHEESPLTELVNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126374_110348631	3300009792	Tropical Forest Soil	MNKQGYRKPEPEILMLVMLAVNGEMNQADLTAIHEESPLTELMNAGLIGQWGGGRTFALTARGKAYVEMICRVPLPE
Ga0126374_114079752	3300009792	Tropical Forest Soil	LTLAVNGEMNQADLTAIHEESPLTELMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126380_102916011	3300010043	Tropical Forest Soil	MNKQGYRKPEPEILMLVTLAVNGEMNQADLTAVYEESALTQSMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0134064_100950042	3300010325	Grasslands Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQAELTALAGYQVSSLTQLMDAGLVGPWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0134065_101246491	3300010326	Grasslands Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQAELTAVAGYQESSLTQLMDAGLVGPWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0134080_105271801	3300010333	Grasslands Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126370_122577441	3300010358	Tropical Forest Soil	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTPVYEESALTQLMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126376_105517571	3300010359	Tropical Forest Soil	MNKQGYRKPEPEILMLVTLAVNGEMNQADLTAVYEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126376_115878731	3300010359	Tropical Forest Soil	MNKQGYRKAEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126372_130204881	3300010360	Tropical Forest Soil	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126378_110745512	3300010361	Tropical Forest Soil	MNKQGYRKAEPEILILLTLAVNGEMNQADLTAIHEESPLTELMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEIWIDPRDGEQYG*
Ga0126378_124995192	3300010361	Tropical Forest Soil	AVKCEMNWADLSSVYEETSLTELVIAGRVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0134066_100305753	3300010364	Grasslands Soil	MNKQGYRTPDPEILMLSMLAVNGEMNQAELTAVAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126379_107829341	3300010366	Tropical Forest Soil	MNKQGYRKAEPEILILLTLAVNGEMNQADLTAIHEESPLTELMNAGLVGEWGGGRTFALTAKGKAYVEMICRVPLPEKKEIWIDPRDGEQYG*
Ga0134128_109861292	3300010373	Terrestrial Soil	ELLMLLMLAVNGEMNQADLTAVYEESALTESMNAGLVDQWGGGRTFALTAKGKAYAEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126381_1023375211	3300010376	Tropical Forest Soil	MNKQGYRTPEPELLVLLMLAVNGEMNQADLAAVYEERPFTELMDAGLVDQWGGGRTFKLTAKGKAYVEMICRVPLPEKKEIWIDP
Ga0126383_107319852	3300010398	Tropical Forest Soil	LMLLMLAVNGEMNQADLTAVYEESPLTELMNAGLASQWGGNRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126383_116575531	3300010398	Tropical Forest Soil	MNKQGYRKPEPEILMLLMLAVNGEMNQADLTAVYEASPLTELMNDGLVEEWGGGHTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0137364_102452162	3300012198	Vadose Zone Soil	EPEILMLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGPWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0137365_101133185	3300012201	Vadose Zone Soil	MDKQGYRKPEPEMLMLLTLAVNGEMNQADLTAIYEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0150984_1169517651	3300012469	Avena Fatua Rhizosphere	LMLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGPWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0157299_103087371	3300012899	Soil	PEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0164300_105264032	3300012951	Soil	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAIHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0126369_112592081	3300012971	Tropical Forest Soil	ITMLLMLAVNGEMNGADLAAVHEKSHLTELVDAGLVEQWGGNRTFVLTARGKAYAEMICWLPLPERKEMWIDPRDGEQYG*
Ga0126369_134746962	3300012971	Tropical Forest Soil	MNKQGYRTPESEILMLLMLAVNGEMNQADLTPVYEESALTQLMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDP
Ga0134087_100915093	3300012977	Grasslands Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQAELTAVAGYQESSLSQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0164308_103312152	3300012985	Soil	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEENPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0164306_103659922	3300012988	Soil	WAPPSSATLWAGNTISSYRKPEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0157307_11563941	3300013096	Soil	MNKQGYRTPESELLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0134078_101096382	3300014157	Grasslands Soil	MNKQGYRTPEPEILMLSMLGVNGEMNQAELTAVAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0134079_100832721	3300014166	Grasslands Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQAELTALAGYQESSLTQLMDAGLVGPWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0173483_101782221	3300015077	Soil	MNKQGYRTPESELLMLLMLAVNGEMNQADLTAVYEESSLTQLMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG*
Ga0132258_139349441	3300015371	Arabidopsis Rhizosphere	MNKPGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPL
Ga0182036_103990612	3300016270	Soil	MLLMLAVNGEMNQADLTAVHEEGPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0182041_121603762	3300016294	Soil	MLLTLAANGEMNAADLAAVYEKSHLTELINAGLVEQWGGSRTFKLTARGQAYVEMICWVPLPERKEMWIDPRDGEQYG
Ga0182034_107781271	3300016371	Soil	MLVMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYMEMICRVPLPEKKEVWIDPRDG
Ga0182038_103551772	3300016445	Soil	MLVMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0184635_102464311	3300018072	Groundwater Sediment	MNKQGYRTPEPEILMLLMLAVNGEMNQAELTAVHEESPHTQLINAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYW
Ga0184624_100838193	3300018073	Groundwater Sediment	MLLMLAVNGEMNQADLTALHEESPHTQLINAGLIEQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0066667_112607541	3300018433	Grasslands Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGPWGGGRTFALTARGKAYVEMICRAPLPEKKEVWIDPRDGEQYG
Ga0126371_113153651	3300021560	Tropical Forest Soil	MNKQGYRKPEPEILILVMLAVKGEMNQTDLTAVCEASPLTELMNAGLVGEWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0126371_113900381	3300021560	Tropical Forest Soil	MNKQGYRTPEPELLVLLMLAVNGEMNQADLAAVYEERPFTELMDAGLVDQWGGGRTFKLTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0126371_122182551	3300021560	Tropical Forest Soil	MNKQGYRKAEPEILILLTLAVNGEMNQADLTAIHEESPLTELMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEIWIDPRDGEQYG
Ga0207663_112320001	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0207659_113861862	3300025926	Miscanthus Rhizosphere	MLLMLAVNGEMNQADLTAVYEESSLTQLMNAGLVGQWGGGRTFALTAKGKAYAEMICRVPLPEKKEVWIDPRDGEQYG
Ga0209153_12128292	3300026312	Soil	MLSMLAVNGEMNQTELTALAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0209155_11415851	3300026316	Soil	MNKQGYRTPEPEILMLSMLAVNGEMNQAELTAVAGYQESSLTQLMDAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0209465_100508162	3300027874	Tropical Forest Soil	MLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0247820_112184162	3300028597	Soil	MNKQGYRTPEPEILMLLMLAVNGEMNQADLTAVHEESPHTQLINAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0075403_104700251	3300030846	Soil	MNKQGYRTPEPEILMLLMLAVNGEMNQADLTALHEESPHTQLINAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0075386_121351272	3300030916	Soil	MLSMLAVNGEMNQAELTAVHEESPLTQLINAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0075373_115218721	3300030945	Soil	MLLTLAVNGEMNQADLTAVHEESPHTQLINAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0307500_100320163	3300031198	Soil	MNQADLTALHEESPHTQLINAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0170824_1098433821	3300031231	Forest Soil	MLSMLAVNGQMNQAELTAVAGYQESSLTQLMDAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0170824_1250042622	3300031231	Forest Soil	LAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0170820_105565191	3300031446	Forest Soil	MLSMLAVNGEMNQAELTAVAGYQESSLTQLMDAGLVEQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0310915_101581082	3300031573	Soil	MLLMLAVNGEMNQADLTAVYEESALTQLMNAGLVGQWGGGRTFALTAKGKAYAEMICRVPLPEKKEVWIDPRDGEQYG
Ga0310915_111456241	3300031573	Soil	GEMNQADLTAVHEESPLTELMNAGLIGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0306917_100804562	3300031719	Soil	MLLMLAVNGEMNQADLTAVYEESALAQLMNAGLVGQWGGGRTFALTAKGKAYAEMICRVPLPEKKEVWIDPRDGEQYG
Ga0318501_103534512	3300031736	Soil	MLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYMEMICRVPLPEKKEVWIDPRDGEQYG
Ga0306918_104423281	3300031744	Soil	MNKQGYRKPEPEILMLVMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYMEMICRVPLPEKKEVWIDPRDGEQYG
Ga0318547_106289492	3300031781	Soil	MLLMLAVNGEMNQADLTAVYEESALTQLMNAGLVGQWGGGRTFALTAKGKAYAEMICRVPLPEKK
Ga0306925_105106541	3300031890	Soil	MNKQGYRKPEPEILMLVMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYMEMICRVPLPEKKEVWIDPRDG
Ga0306921_102532191	3300031912	Soil	MLVMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYMEMICRVPLPEKKEVWIDPRDGEQYG
Ga0306921_103094174	3300031912	Soil	MLMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0310913_102237432	3300031945	Soil	MLLMLAVNGEMNQADLTAVYEESALTQLMNAGLVGQWGGGRTFALTARGKAYMEMICRVPLPEKKEVWIDPRDGEQYG
Ga0310913_105713161	3300031945	Soil	MNKQGYRKPEPEMLMLLMLAVNGEMNQADLTAVHEEGPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0306922_109591732	3300032001	Soil	MLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWID
Ga0318545_102439871	3300032042	Soil	GYRTPESELLMLLMLAVNGEMNQADLTAVYEESALAQLMNAGLVGQWGGGRTFALTAKGKAYAEMICRVPLPEKKEVWIDPRDGEQYG
Ga0318506_104680592	3300032052	Soil	MNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYMEMICRVPLPEKKEVWIDPRDGEQYG
Ga0306920_1023134452	3300032261	Soil	LMLLMLAVNGEMNQADLTAVHEESPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0310914_105369813	3300033289	Soil	MLMLLMLAVNGEMNQADLTAVHEEGPLTELMNAGLVGQWGGGRTFALTARGKAYVEMICRVPLPEKKEVWIDPRDGEQYG
Ga0247830_108159381	3300033551	Soil	MLLMLAVNGEMNQADLTALHDETPHTQLINAGLIEQWGGGRTFALTAKGKAYVEMICRVPLPEKKEVWIDPRDGEQYG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081166

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences