Metagenome / Metatranscriptome Family F081021

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081021
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	117 residues
Representative Sequence	VCRAVKVLCVATDAEALEALRRVTVAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVSLVRDRFPAMRIVTDRDAPGTSAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSQP
Number of Associated Samples	83
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.60 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	82.46 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.368 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (44.737 % of family members)
Environment Ontology (ENVO)	Unclassified (42.105 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.33% β-sheet: 13.33% Coil/Unstructured: 57.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.23.1.0: automated matches	d4d6ya_	4d6y	0.86453
c.23.1.0: automated matches	d3a0ua_	3a0u	0.86447
c.23.1.0: automated matches	d2jk1a_	2jk1	0.86136
c.23.1.0: automated matches	d3cz5a_	3cz5	0.86113
c.23.1.1: CheY-related	d1w25a1	1w25	0.86039

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF01544	CorA	42.98
PF01464	SLT	16.67
PF02401	LYTB	5.26
PF06210	DUF1003	4.39
PF05235	CHAD	1.75
PF11706	zf-CGNR	0.88
PF01769	MgtE	0.88
PF01865	PhoU_div	0.88
PF03575	Peptidase_S51	0.88
PF00300	His_Phos_1	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	42.98
COG0761	4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH	Lipid transport and metabolism [I]	10.53
COG4420	Uncharacterized membrane protein	Function unknown [S]	4.39
COG3025	Inorganic triphosphatase YgiF, contains CYTH and CHAD domains	Inorganic ion transport and metabolism [P]	1.75
COG5607	CHAD domain, binds inorganic polyphosphates	Function unknown [S]	1.75
COG1392	Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family	Inorganic ion transport and metabolism [P]	0.88
COG1824	Permease, similar to cation transporters	Inorganic ion transport and metabolism [P]	0.88
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.88

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.25 %
Unclassified	root	N/A	1.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.37 %
Unclassified	root	N/A	1.75 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.37 %
Unclassified	root	N/A	1.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.49 %
Unclassified	root	N/A	1.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.49 %
Unclassified	root	N/A	1.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	88.60 %
Unclassified	root	N/A	1.75 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	83.33 %
Unclassified	root	N/A	1.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	83.33 %
Unclassified	root	N/A	1.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003319\|soilL2_10037181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4377	Open in IMG/M
3300004463\|Ga0063356_101019081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300004463\|Ga0063356_104832153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300004479\|Ga0062595_100644613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300004643\|Ga0062591_102368344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300005045\|Ga0071328_131050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3176	Open in IMG/M
3300005406\|Ga0070703_10339777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300005546\|Ga0070696_101388847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300005985\|Ga0081539_10004004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16970	Open in IMG/M
3300006058\|Ga0075432_10156405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300006844\|Ga0075428_100016938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8048	Open in IMG/M
3300006845\|Ga0075421_102262623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300006846\|Ga0075430_100950072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300006853\|Ga0075420_100616704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300006894\|Ga0079215_10365678	Not Available	833	Open in IMG/M
3300007004\|Ga0079218_10364710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300007004\|Ga0079218_10571129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1023	Open in IMG/M
3300007004\|Ga0079218_13728492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300009100\|Ga0075418_10031691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5747	Open in IMG/M
3300009100\|Ga0075418_10094635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3175	Open in IMG/M
3300009147\|Ga0114129_10180383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2874	Open in IMG/M
3300009147\|Ga0114129_10684334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1320	Open in IMG/M
3300009147\|Ga0114129_11812078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300009156\|Ga0111538_10919073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300009157\|Ga0105092_10791891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300009837\|Ga0105058_1056837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	882	Open in IMG/M
3300010039\|Ga0126309_10081249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1628	Open in IMG/M
3300010039\|Ga0126309_10626735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300010041\|Ga0126312_10040974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3093	Open in IMG/M
3300010145\|Ga0126321_1075609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1026	Open in IMG/M
3300010145\|Ga0126321_1301111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1342	Open in IMG/M
3300011000\|Ga0138513_100004745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1495	Open in IMG/M
3300012093\|Ga0136632_10273431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300012938\|Ga0162651_100002346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1801	Open in IMG/M
3300017965\|Ga0190266_10629744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300017997\|Ga0184610_1081104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300018000\|Ga0184604_10016775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1668	Open in IMG/M
3300018027\|Ga0184605_10002258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6447	Open in IMG/M
3300018054\|Ga0184621_10237096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300018056\|Ga0184623_10491027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300018061\|Ga0184619_10083931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1417	Open in IMG/M
3300018066\|Ga0184617_1040960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300018071\|Ga0184618_10023787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2037	Open in IMG/M
3300018076\|Ga0184609_10124991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1171	Open in IMG/M
3300018076\|Ga0184609_10191653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300018078\|Ga0184612_10092382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1582	Open in IMG/M
3300018422\|Ga0190265_10767582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300018429\|Ga0190272_10215889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1403	Open in IMG/M
3300018429\|Ga0190272_11159001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300018465\|Ga0190269_10948552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300018465\|Ga0190269_11802256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300018466\|Ga0190268_10185773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1114	Open in IMG/M
3300018466\|Ga0190268_10845163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300018469\|Ga0190270_10997013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300018469\|Ga0190270_11337984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300018469\|Ga0190270_11490476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300018481\|Ga0190271_10227965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1879	Open in IMG/M
3300018920\|Ga0190273_10521338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300019254\|Ga0184641_1153370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1269	Open in IMG/M
3300019377\|Ga0190264_10233647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1049	Open in IMG/M
3300019884\|Ga0193741_1061399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300020003\|Ga0193739_1030886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1391	Open in IMG/M
3300020202\|Ga0196964_10172372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	989	Open in IMG/M
3300021073\|Ga0210378_10086219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1227	Open in IMG/M
3300027650\|Ga0256866_1027657	All Organisms → Viruses → Predicted Viral	1467	Open in IMG/M
3300027650\|Ga0256866_1104112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300027880\|Ga0209481_10649835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300027886\|Ga0209486_10377663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	854	Open in IMG/M
3300027907\|Ga0207428_10021633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5442	Open in IMG/M
3300028714\|Ga0307309_10029356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300028716\|Ga0307311_10014576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1906	Open in IMG/M
3300028722\|Ga0307319_10080927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1033	Open in IMG/M
3300028771\|Ga0307320_10027004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2086	Open in IMG/M
3300028771\|Ga0307320_10029743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1989	Open in IMG/M
3300028771\|Ga0307320_10035305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1827	Open in IMG/M
3300028771\|Ga0307320_10189163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300028771\|Ga0307320_10200836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300028784\|Ga0307282_10086903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1438	Open in IMG/M
3300028791\|Ga0307290_10011414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3009	Open in IMG/M
3300028791\|Ga0307290_10173495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300028791\|Ga0307290_10254339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300028796\|Ga0307287_10003086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5428	Open in IMG/M
3300028799\|Ga0307284_10296609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300028814\|Ga0307302_10109571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1322	Open in IMG/M
3300028819\|Ga0307296_10367115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300028828\|Ga0307312_10009726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5278	Open in IMG/M
3300028828\|Ga0307312_10517477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300028878\|Ga0307278_10018526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3228	Open in IMG/M
3300028878\|Ga0307278_10094138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1347	Open in IMG/M
3300028878\|Ga0307278_10118455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1189	Open in IMG/M
3300028880\|Ga0307300_10113261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300030006\|Ga0299907_10000652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17729	Open in IMG/M
3300030006\|Ga0299907_10002357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11573	Open in IMG/M
3300030006\|Ga0299907_10028632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4290	Open in IMG/M
3300030006\|Ga0299907_10164755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1832	Open in IMG/M
3300030006\|Ga0299907_10262785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1415	Open in IMG/M
3300030006\|Ga0299907_10295709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1322	Open in IMG/M
3300030006\|Ga0299907_11005650	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300030006\|Ga0299907_11273680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300030783\|Ga0102752_1490558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300030903\|Ga0308206_1081173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300031092\|Ga0308204_10039480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1095	Open in IMG/M
3300031228\|Ga0299914_11090771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300031731\|Ga0307405_10824444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300031847\|Ga0310907_10496728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300031852\|Ga0307410_11163398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300031854\|Ga0310904_10419477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	881	Open in IMG/M
3300031908\|Ga0310900_10453380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300032122\|Ga0310895_10358315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300032126\|Ga0307415_100218194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1527	Open in IMG/M
3300032211\|Ga0310896_10304813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300033407\|Ga0214472_10280287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1590	Open in IMG/M
3300033417\|Ga0214471_10421951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1074	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.42%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	14.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.04%
Sediment	Environmental → Aquatic → Sediment	9.65%
Freshwater	Environmental → Aquatic → Freshwater	5.26%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.63%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.75%
Loam	Environmental → Terrestrial → Soil → Loam	1.75%
Sand	Environmental → Terrestrial → Soil → Sand	1.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.75%
Ice	Environmental → Aquatic → Freshwater → Ice	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.02%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.63%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.88%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.88%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	44.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.39%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.75%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.75%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.88%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.88%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.88%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.88%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030783	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 3C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
soilL2_100371813	3300003319	Sugarcane Root And Bulk Soil	MCRAVRVLCVASDEEALRALRAATVAAEWELTPGATNETDALGLIDAERPHAVVAFGDYGRLVALARERFPAMRIVTDRDLPGTSGVASAAGEVRDLLRSLGRPSGPILGAS*
Ga0063356_1010190812	3300004463	Arabidopsis Thaliana Rhizosphere	VALAVCRAVKVLCVAEDEESLSALRRATTAADWELTQGATTETDALGVIDAERPHALVAFGGFEHLVSLVRDRFPAIRIVTDRDAPGASAVAPSRDDVREVLRSLARPGGPILEGS*
Ga0063356_1048321531	3300004463	Arabidopsis Thaliana Rhizosphere	VCRAVKVLCVAADDDGLRALRRLTTAAEWELIPGATNETDALGLIDSERPQTMVAFGDFERLVSLVRDRFPAMRIVTDRDTPGTNAVAASHEDVRDVLRSLGRPGGPILEGLGA
Ga0062595_1006446131	3300004479	Soil	ALAVCRAVKVLCVATDDDALRALRAATTAAEWELTPGATDEIQALGLVDSERPHAMVVFGDFPRLVSLVRDRFPAMRIVTDRDAPGANAVAASPEDVREVLRSLGRPGGPILEGLGAQPPQGSQP*
Ga0062591_1023683442	3300004643	Soil	VCRAVKVLCVATDDDALRALRAATTAAEWELTPGATDEIQALGLVDSERPHAMVVFGGFPRLVSLVRDRFPAMRIVTDRDAPGANAVAASPEDVREVLRSLGRPGGPILEGLGAQPP
Ga0071328_1310505	3300005045	Permafrost	VALTVCRAVKVLCVARDDEALEALRHATTAAEWELTPGATNETDALGLIDAERPHVMVAFGMYGELVSLVRDRFPAMRIVTDRDTPGTSAVASSRADVRDLLRSLARPGGPIVEGAGAQPPQGSQP*
Ga0070703_103397771	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VCRAVKVLCVADDDEALRALRQATTAAEWELTPGATNETDAFGLIDSERPHTVVVFGDFERLVSLVRDRFPAIRIVTDRDTPGTNAVAASRDEVRELLRSLGRPGGPIVDGLGAQPPQGSQP*
Ga0070696_1013888472	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ALRAATTAAEWELTPGATDEIQALGLVDSERPHAMVVFGDFPRLVSLVRERFPAMRIVTDRDAPGANAVAASPEDVREVLRSLGRPGGPILEGLGAQPPQGSQP*
Ga0081539_100040044	3300005985	Tabebuia Heterophylla Rhizosphere	MCRAVAVLCVAPDATSLAELRRATVSAEWELTTGATDETDALGLVDAERPHVLVAFGDFPRLVALVRDRFPAMRIVTDRAAPGASAVVSSAAEVREALRALARPGGPVRSRTEG*
Ga0075432_101564052	3300006058	Populus Rhizosphere	VCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRTVLRTLSRSGGPVLPQA*
Ga0075428_1000169383	3300006844	Populus Rhizosphere	MGLAVCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRTVLRTLSRSGGPVLPQA*
Ga0075421_1022626231	3300006845	Populus Rhizosphere	VCRALKVLCVADDAPSLDALRRATIAAEWELTLGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRTVLRTLSRSGGPVLPQA*
Ga0075430_1009500722	3300006846	Populus Rhizosphere	VCRAVKVLCVAVDEEELRALRLATTAAEWELTSGATSETDALGVVDTERPHAMVAFGPYEQLVSLVRERFPAMRIVTDRDTPGASAVATSRVDVREALRSLARPGGPILDRS*
Ga0075420_1006167042	3300006853	Populus Rhizosphere	VCRAVKVLCVAVDEEELRALRLATTAAEWELTPGATSETDALGVVDTERPHAMVAFGPYEQLVSLVRERFPAMRIVTDRDTPGASAVATSRVDVREALRSLARPGGPILEQP*
Ga0079215_103656782	3300006894	Agricultural Soil	VALAVCRAVKVICVATDDEALEALQRATSAAEWELTPGATNETDALGLIDAERPHAMLAFGSFGELVALVRDRFPAMRIVTDRDTPGTSAVASSRDDVRGLLRSLARPGGPVVEGAGAQPPQGSQP*
Ga0079218_103647102	3300007004	Agricultural Soil	VCRAVRVLCVATDADELLALRQATTAAEWELTPGATDETAALGVIDAERPHAMVVFGSYETLVSLVRDRFPAMRIVTDRDAPGTSAVAPSREHVREILRSLARPGGPVVEGSGAQPPQGSQP*
Ga0079218_105711292	3300007004	Agricultural Soil	VALAVCRAVKVLCVAGDEDGLRTLRLATTAAEWELTPGATSETDALGVVDAERPHAIVVFGPYEQLVSLVRERFPAMRIVTDRDTPGASAVVTSRADVREALRSLARPGGPILEQP*
Ga0079218_137284922	3300007004	Agricultural Soil	AVCRAVKVLCVATDDEALRALRRATTAVEWELTPGATNESDALGVIDAERPHAVVVFGSFETLVALVRDRFPAMRIVTDRDAPGTSAVASSRDDVREVLRSLARPGGPIVEGSGAQPPQGDQP*
Ga0075418_100316917	3300009100	Populus Rhizosphere	DALRRATIAAEWELTPGATNETDALAMIDAERPQSMVVFGQHVAFVALVRERFPAMRIVTDRETEGTSAVARSHEDVRTVLRTLARPGGPVLPQA*
Ga0075418_100946351	3300009100	Populus Rhizosphere	MGLAVCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRTVLRTLSRS
Ga0114129_101803834	3300009147	Populus Rhizosphere	VALAVCRAVKVLCVATDDDALRALRAATTAAEWELTPGATDEIQALGLVDSERPHAMVVFGDFPRLVSLVRDRFPAMRIVTDRDAPGANAVAASPEDVREVLRSLGRPGGPILEGLGAQPPQGSQP*
Ga0114129_106843342	3300009147	Populus Rhizosphere	VCRAVKVLCVAVDEEELRALRLATTAAEWELTSGATSETDALGVVDTERPHAMVAFGPYEQLVSLVRERFPAMRIVTDRDTPGASAVATSRVDVREALRSLARPGGPILEQP*
Ga0114129_118120782	3300009147	Populus Rhizosphere	VALAVCRAVKVLCVAADDDQLRALRRLTTTAEWELAPGATNETDALALIDSERPHAMVVFGDFERLVSLARDRFPAMRIVTDRDTPGTNAVAASHEDVREVLRSLGRPGGPILEGLGAQPPQGSQP*
Ga0111538_109190731	3300009156	Populus Rhizosphere	AAGMGLAVCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRTVLRTLSRSGGPVLPQA*
Ga0105092_107918912	3300009157	Freshwater Sediment	VALGVCRAVTVLCVAEDEGSLRALRLATTAAEWELTQGATNDVDALGVIDAERPHAVVAFGPYAQLVALVRERFPAIRIVTDRDTPGANAVAPTRDDVREVLRALARPGGPILERP*
Ga0105058_10568372	3300009837	Groundwater Sand	EEAVAALRRAATAAEWELTPGATNETDALGLIDTERPHAMVAFGSYEGLVSLVRDRFPAMRIVTDRATPGTSAVASSRDEVRSLLRSLARPGGPIVEGLLAQPPQGSQP*
Ga0126309_100812492	3300010039	Serpentine Soil	VATDAEALEALRRQTTAAEWELTPGATSETDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDAPGTNAVASSRDDVRELLRSLGRPGGPIVGGLGAQPPQGSHP*
Ga0126309_106267352	3300010039	Serpentine Soil	VCRAVKVLCVAADPDELLALRHATTAAEWELTPGATDETGALGVIDAERPHAMVVFGSYESLVSLIRDRFPAMRIVTDRDAPGTSAVAPSRDDVREILRSLARPGGPVVERSAAQPPQGAQP*
Ga0126312_100409742	3300010041	Serpentine Soil	VAVAVCRSIRVLCVAPDDVALTALRRATVAAEWELTPGATNETDALGLVDVERPHALVAFGEFERLVTLVRERFPGIRIVTDRAAGGANAVVASPDEVRETLRALGRPGGPVRASSDG*
Ga0126321_10756091	3300010145	Soil	LALTVCRATKVLCVAGDAESLRALRMATTAAEWELTAGATNETDALGVIDVERPQALVAFGDWATLVALVRERFPAMRIVTDRPANGSDAVASSLEEVRDLLRASRRPAGPVR*
Ga0126321_13011112	3300010145	Soil	MCRAIKVLCVAGDPEGLKALRMATTAAEWELTPGATNETDALGIVDAERPLALVAFGDWAPLVALVRERFPAMRIVTDRPADGSDAVASSPDRVRDLLRAGRRPAGPVR*
Ga0138513_1000047452	3300011000	Soil	VALAVCRAVKVLCVATDAEALEALRRQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDTPGTNAVASSRYDVRELLRALGRPGGPIVDGLGAQPPQGSHP*
Ga0136632_102734312	3300012093	Polar Desert Sand	MCRAVKVLCVATDDEGLGALRRATTAAEWELTPGAINETDALGMIDAERPHAMVVFGSYETLVSLVRDRFPAMRIVTDRDAPGTSAVASSRDDVREILRSLARPGGPIVEGSGAQPPQGDQP*
Ga0162651_1000023463	3300012938	Soil	VALAVCRAVKVLCVATDAEALEALRRQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFARLVALARDRFPAMRIVTDRDTPGTNAVASSRDDVRELLRALGRPGGPIVDGLGAQPPQGSHP*
Ga0190266_106297442	3300017965	Soil	VCRAVKVLCVADDEGSLHALRLATTAAEWELTEGATNEVDALGVIDVERPHALVAFGPYMRLVALVRERFPAMRIVTDRDTPGANAVAPTRDDVREVLRTLARPGGPILE
Ga0184610_10811042	3300017997	Groundwater Sediment	GLRLPLRARDDGGVRGGVVRRLPEAWVALAAVCRAVKVLCVATDAEALEALRRVTVAAEWELTPGATNEIDALGLIDSERPHSMVVFGDFERLVSLVRDRFPAMRIVTDRDAPGTNAVASSRDDVRELLRSLARPGGPIVDGLGAQPPQGSQP
Ga0184604_100167752	3300018000	Groundwater Sediment	VCRAVKVLCVATDAEALEALRHQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDTPGTNAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSHP
Ga0184605_100022582	3300018027	Groundwater Sediment	VCRALKVLCVATDDEALQALRRATTTADWELTSGATNETDALGVIDSERPHTMVAFGDYERLVLLVRDRFPAIRIVTDRDTPGTSAVAASRDDVRELLRSLGRPGGPIVEGPRAQPPQGSQP
Ga0184621_102370961	3300018054	Groundwater Sediment	RALDDGRVGIRVVHRLPQARLALAVCRAVKVLCVATDDEALQALRRVTTAVEWELTPGATNEIDALGLIDSERPHTLVAFGGFERLVSLARDRSPALRIVTDRDTPGTSAVAASRDDVRELLRSLGRPGGPIVEGPRAQPPQGSQP
Ga0184623_104910272	3300018056	Groundwater Sediment	DAEALEALRRVTIAAEWELTPGATNETDALGLIDSERPHTMVAFGDFERLVSLVRDRFPAMRIVTDRDAPGTNAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSQP
Ga0184619_100839311	3300018061	Groundwater Sediment	RVCRALKVLCVATDDEALQALRRATTTADWELTSGATNETDALGVIDSERPHTMVAFGDFERLVVFVRDRFPATRIVTDRDTPGPSAVAASRDDVRELLRSLGRPGGPIVEGPRAQPPQGSQP
Ga0184617_10409602	3300018066	Groundwater Sediment	VCRAVKVLCVAADAEALETLRRQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVALTRDRFPAMRIVTDRDTPGTNAVASSRDDVRELLRSLGRPGGPIVEGPRAQPPQGSQP
Ga0184618_100237874	3300018071	Groundwater Sediment	VLCVATDDEALQALRRATTTADWELTSGATNETDALGVIDSERPHTMVAFGDYERLVLLVRDRFPAIRIVTDRDTPGTSAVAATRDDVRELLRSLGRPGGPIVEGPRAQPPQ
Ga0184609_101249912	3300018076	Groundwater Sediment	MCRAVKVLCVADDEESLSALRRATTAAEWELTAGATSETDALSVIDVERPHALVVFGGFEHLVWLVRDRFPAMRIVTDRDTPGASAVAPTRDDVREVLRSLARPGGPILAGS
Ga0184609_101916531	3300018076	Groundwater Sediment	TVAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVSLVRDRFPAMRIVTDRDAPGTSAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSQP
Ga0184612_100923822	3300018078	Groundwater Sediment	VCRAVKVLCVADDEESLSALRRATTAAEWELTPGATTEIDALGVIDAERPHELVVFGGFDHLVSLVRDRFPTMRIVTDRDTPGASAVAPSRDDVREVLRSLARPGGPILEVPELRGPRDPIRRDAPSAS
Ga0190265_107675822	3300018422	Soil	VCRAVKVLCVAAGDEELGALRRATTAAEWELTPGATNDTDALALIDAERPHAMVVFGTYAELVSLVRDRFPAMRIVTDRDTPGTSAVASSRDEVREVLRSLARPGGPIVEGSGAQPPQGFQP
Ga0190272_102158892	3300018429	Soil	VCRAVKVLCVAEDEESLSALRRATTAAEWELTPGATTETDALGVIDAERPHALVVFGGFEHLVSLVRDRFPAMRIVTDRDTPGASAVAPSRDDVREVLRSLARPGGPILQGS
Ga0190272_111590012	3300018429	Soil	VCRAVKVLCVAADVEALGALRRATTAAEWELTPGATNETDAFGLIDAERPHAMVVFGGYGELVSMVRDRFPAMRIVTDRDTPGTSAVASSHEEVREVLRSLARPGGPIVEGSGAQPPQGSQP
Ga0190269_109485522	3300018465	Soil	PEAWVALAVCRALKVLCVATDPEALEALRRQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDTPGTNAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSQP
Ga0190269_118022561	3300018465	Soil	RALRLATTAAEWELTPGATSETDALGVVDAERPHAMVAFGPYEQLVSLVRERFPAMRIVTDRDTPGASAVAISRGDVREALRSLARPGGPILEQP
Ga0190268_101857731	3300018466	Soil	DEPSLAALQRATVAAEWELTPGATNLTDALGVVDGERPHALVVFGDHGPLVALVRERFPAMRIVTDRAAPGTSAVVAAPDEVREALRSLARPGGPVRARDDA
Ga0190268_108451632	3300018466	Soil	VCRAVKVLCVAGDEEELRALRLATTAAEWELTPGATNQADALGVVDSERPHAMVAFGPYEQLVSLVRERFPAMRILTDRDTPGASAVAISRDDVREVLRSLARPGGPILEQP
Ga0190270_109970132	3300018469	Soil	VCRAVTVLCVAEDEGSLRALRLATTAAEWELTQGATNDVDALGVIDAERPHAVVAFGPYASLIALVRERFPAMRIVADRDTPGANAVAPTRDDVRGVLRALARPGGPILERP
Ga0190270_113379842	3300018469	Soil	VCRAVTVLCIAEDEGSLRALRLATTAAEWELTQGATNEVDALGVIDAERPHAVVAFGPYAQLVALVRERFPAMRIVTDRDTPGANAVAPTRDDVREVLRALARPGGPIL
Ga0190270_114904762	3300018469	Soil	VCRAVKVLCVAEDEGSLRALRLATTAAEWELTQGAANDVDALGVIDAERPHAVVAFGPYAQLVALVRERFPAMRIVTDRDTPGANAVAPTRDDVREVLRALARPGGPILDGP
Ga0190271_102279652	3300018481	Soil	VCRAVTVLCIAEDEGSLRALRLATTAAEWELTQGATNEVDALGVIDAERPHAVVAFGPYAQLVALVRERFPAIRIVTDRDTPGANAVAPTRDDVRGVLRALARPGGPILERP
Ga0190273_105213382	3300018920	Soil	VALAAVCRAVKVLCVATDAEALEALRRQTTAAEWELTPGATNESDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDTPGTNAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSHP
Ga0184641_11533702	3300019254	Groundwater Sediment	VCRAVKVLCVATDDEALQALRRATTTADWELTSGATNETDALGVIDSERPHTMVAFGDYERLVLLVRDRFPAIRIVTDRDTPGTNAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSHP
Ga0190264_102336471	3300019377	Soil	VCRAVKVLCVAGDEEELRALRLATTAAEWELTPGATSETDALGMIDAERPHAMVVFGPYEQLVSLVRERFPAMRIVTDRDTPGASAVATSRDDVREALRSLARPGGPILEQP
Ga0193741_10613991	3300019884	Soil	LAVCRAVKVLCVAHDEESLSALRRATTAAEWELTPGATSETDALGVIDAERPHALVAFGGFEHLVSLVRDRFPAIRIVTDRDTPGASAVAPTREDVREVLRSLARPGGPILESS
Ga0193739_10308862	3300020003	Soil	VALAVCRAVKVLCVAHDEESLSALRRATTAAEWELTPGATSETDALGVIDAERPHALVAFGGFEHLVSLVRDRFPAIRIVTDRDTPGASAVAPTREDVREVLRSLARPGGPILESS
Ga0196964_101723722	3300020202	Soil	MALAMCRAVKVLCVASDELQLDVLRRAAVAAEWELTPGATTETDALALVDGERPHALVVFGDFERLVGLVRERFPAMRIVTDRDTPGASAVVESPDGVREALRAMGRPPGPVRGEVRS
Ga0210378_100862192	3300021073	Groundwater Sediment	VCRAVKVLCVATDAEALEALRRVTVAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVSLVRDRFPAMRIVTDRDAPGTSAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSQP
Ga0256866_10276572	3300027650	Soil	VCRAVKVLCVATDDEGLGTLRRATTAAEWELTPGATNETDALGVIDAERPHAMVVFGSYETLVSLVRDRFPAMRIVTDRDAPGTSAVASSCDDVREVLRSLARPGGPIVEASGVQPPQGDQP
Ga0256866_11041121	3300027650	Soil	DLAVRRLPEAGVALAVCRAVKVLCVADDEESLAALRGATTAAEWELTPGATTETDALGVIDAERPHALVAFGGFERLVSLVRERFPAMRIVTDRDAPGASAVAHSRDDVREVLRSLARPGGPILDGS
Ga0209481_106498351	3300027880	Populus Rhizosphere	PRAGPDGGLGRSALSLVPAAGMGLAVCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRTVLRTLSRSGGPVLPQA
Ga0209486_103776632	3300027886	Agricultural Soil	CRAVKVLCVATDDEALRALRRATTAVEWELTPGATNESDALGVIDAERPHAVVVFGSFETLVALVRDRFPAMRIVTDRDAPGTSAVASSRDDVREVLRSLARPGGPIVEGSGAQPPQGDQ
Ga0207428_100216335	3300027907	Populus Rhizosphere	MGLAVCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRTVLRTLSRSGGPVLPQA
Ga0307309_100293562	3300028714	Soil	VCRALKVLCVATDDGALQALRLATTAAEWELTPGATDETGALGLIDSERPHTMVAFGDFGRLVSLVRDRFPAIRIVTDRDTPGTNAVAASRDDVRELLRSLGRPGGPIVEALGAQPPQGSQP
Ga0307311_100145762	3300028716	Soil	VCRALKVLCVATDDGALQALRLATTAPEWELTPGATDETGALGLIDSERPHTMVAFGDFGRLVSLVRDRFPAIRIVTDRDTPGTNAVAASRDDVRELLRSLGRPGGPIVEALGAQPPQGSQP
Ga0307301_102419912	3300028719	Soil	VLCVATDDEALQALRRVTTAAEWELTPGATNEIDALGLIDSERPHTMVAFGGFERLVSLARDRFPALRIVTDRDTPGADAVAVSRDDVREL
Ga0307319_100809273	3300028722	Soil	VRRRAVRRFPEAWVALAVCRAVKVLCVAIDAEALEALRRQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDTPGTNVVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSHP
Ga0307320_100270043	3300028771	Soil	VALAVCRAVKVLCVATDAEALEALRRQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDTPGTNVVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSHP
Ga0307320_100297432	3300028771	Soil	VLCVATDDEALQALRRVTTAVEWELTPGATNEIDALGLIDSERPHTMVAFGGFERLVSLARDRFPALRIVTDRDTPGADAVAVSRDDVRELLRSLGRPGGPMVDDPRAQPPQGSQP
Ga0307320_100353052	3300028771	Soil	VCRAVKVLCVATDDEALQALRRATTTADWELTSGATNETDALGVIDSERPHTMVAFGDYERLVLLVRDRFPAMRIVTDRHTPGTSAVAASRDDVRELLRSLGRPGGPIVEGPRAQPPQGSQP
Ga0307320_101891632	3300028771	Soil	VCRAVKVLCVAGDDDALRALRQLATAAEWELTPGATNETDALGLIDSERPHAMVVFGDFERLVSLVRDRFPSMRIVTDRDTPGTNAVAASREVVRDVLRSLGRPGGPILEGLGAQPPQGSHP
Ga0307320_102008361	3300028771	Soil	VCRAVKVLCVAEDEESLSALRRATTAAEWELTPGATTETHALGVIDAERPHALVAFGGFEHLVSLVRDRFPAMRIVTDRDSPGASAVAPSRDEVREVLRSLARPGGP
Ga0307282_100869033	3300028784	Soil	VCRALKVLCVATDDGALQALRLATTAPEWELTPGATDETGALGLIDSERPHTMVAFGDFGRLVSLVRDRFPAIRIVTDRDTPGTNAVAASRDDVRELLRSLG
Ga0307290_100114143	3300028791	Soil	VLCVATDDEALQALRRATTTADWELTSGATNETDALGVIDSERPHTMVAFGDYERLVLLVRDRFPAIRIVTDRDTPGTSAVAASRDDVRELLRSLGRPGGPIVEGPRAQPPQGSQP
Ga0307290_101734952	3300028791	Soil	VCRAVKVLCVATDDEALQALRQATTAADWELTPGATNETDALGLIDSERPHTMVAFGDFERLVSLVRDRFPAMRIVTDREAPGTNAVAASRDHVRELLGSLGRPGGPIVEGLGAQPPQGSQP
Ga0307290_102543391	3300028791	Soil	ESLSALRRATTAAEWELTPGATSETDALGVIDMERPHALVVFGGFEHLVWLVRDRFPAMRIVTDRDTPGASAVALTRDDVREVLRSLARPGGPILESS
Ga0307287_100030862	3300028796	Soil	VLCVATDDEALQALRRVTTAAEWELTPSATNEIDALGLIDSERPHTMVAFGGFERLVSLARDRFPTLRIVTDRDTPGADAVAASRDDVRELLRSLGRPGGPIVDGPRAQPPQGSQP
Ga0307284_102966092	3300028799	Soil	VCRALKVLCVATDDGALQALRLATTAPEWELTPGATDETGALGLIDSERPHTMVAFGDFGRLVSLVRDRFPAIRIVTDRDTPGTNAVAASRDDVRELLRSLGHPGGPIVEALGARPPQGSQP
Ga0307302_101095712	3300028814	Soil	VCRAVKVLCVATDDEALQALRRVTTAVEWELTPGATNEIDALGLIDSERPHTMVAFGGFERLVSLARDRFPALRIVTDRDTPGADAVAVSRDDVRELLRSLGRPGGPMVDDPRAQPPQGSQP
Ga0307296_103671151	3300028819	Soil	RLATTAAEWELTPGATDETGALGLIDSERPHTMVAFGDFGRLVSLVRDRFPAIRIVTDRDTPGTNAVAASRDDVRELLRSLGRPGGPIVEALGAQPPQGSQP
Ga0307312_100097266	3300028828	Soil	VCRALKVLCVATDDGALQALRLATTAPEWELTPGATDETGALGLIDSERPHTMVAFGDFGRLVSLVRDRFPAIRIVTDRDTPGTNAVAASRDDVRELLRSLGHPGGPIVEALGAQPPQGSQP
Ga0307312_105174771	3300028828	Soil	LRQVATAAEWELTPGATTETDALGLIGSERPHTMVVFGDFERLVSLVRDRFPAMRIVTDRDTPGTNAVAASHDDVRELLRSLGRPGGPIVEGLGAQPPQGSQP
Ga0307278_100185262	3300028878	Soil	VCRAIKVLCVATDAETLKALRRVMTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVSLARDRFPALRIVTDRDTPGANAVAASRDDVRELLRSLGRPGGPIVEKLGAQPPQGSQP
Ga0307278_100941382	3300028878	Soil	VCRAVKVLCVAPDDEALRALRQVATAAEWELTPGATTETDALGLIGSERPHTMVVFGDFERLVSLVRDRFPAMRIVTDRDTPGTNAVAASHDDVRELLRSLGRPGGPIVEGLGAQPPQGSQP
Ga0307278_101184552	3300028878	Soil	VLCVATDDEALQALRRVTTAVEWELTPGATNEIDALGLIDSERPHTMVAFGGFERLVSLARDRFPALRIVTDRDTPGADAVAVSRDDVRELLRSLGRSGGPIVDGPRAQPPQGSQP
Ga0307300_101132612	3300028880	Soil	VCRAVKVLCVATDDEALQALRRVTTAAEWELTPSATNEIDALGLIDSERPHTMVAFGGFERLVSLARDRFPTLRIVTDRDTPGADAVAASRDDVRELLRSLGRPGGPIVDGPRAQPPQGSQP
Ga0299907_100006526	3300030006	Soil	VALAVCRAVKVLCVAPDDEGLGALRRATTAAEWELTPGATNETDALGLIDAERPHAMVVFGSYETLVSLVRGRFPAMRIVTDRDAPGTSAVASSPDEVREILRSLARPGGPIVEGSGAQPPQGSQP
Ga0299907_100023576	3300030006	Soil	VALAVCRAVKVLCVADDEESLAALRGATTAAEWELTPGATTETDALGVIDAERPHALVAFGGFERLVSLVRERFPAMRIVTDRDAPGASAVAHSRDDVREVLRSLARPGGPILDGS
Ga0299907_100286324	3300030006	Soil	VCRAVKVLCVATDDEALEALRRGTSAAEWELTPGATNETDALGLIDAERPHAMVAFGSYGELVALVRDRFPAMRIVTDRDLPGTSAVASSRDDVRALLHSLARPGGPIVGGAGAQPPQGSQP
Ga0299907_101647552	3300030006	Soil	VCRAVKVLCVATDDEGLGTLRRATTAAEWELTPGATNETDALGVIDAERPHAMVVFGSYETLVSLVRDRFPAMRIVTDRDAPGTSAVASSRDDVREVLRSLARPGGPIVEASGVQPPQGDQP
Ga0299907_102627852	3300030006	Soil	MGVALAVCRAVKVLCVADDEESLRALRLATTAVEWELTQGASSETDALGVIDAERPHAMVAFGPYDQLVSLVRERFPAMRIVTDRNTPGASAVAASRDDVREVLRSLARPGGPVLERP
Ga0299907_102957092	3300030006	Soil	VCRAVKVLCVAADDASLTTLRSATTAAEWELTPGATSEAVALGLIDAERPHAVVAFGEFANLVTLVRERFPAMRIVTDRDTPGANAVASTREDVREVLRTLSRPGGPILEGP
Ga0299907_110056502	3300030006	Soil	VGVALGVCRAVKVLCVAGDEESLRALRLATTAVEWELTQGATSETDALGVIDAERPHAMVVFGPYDQLVSLVRERFPAMRIVTDRNTPGASAVAASRDDVREVL
Ga0299907_112736802	3300030006	Soil	MCRAVKVLCVADGEGSLAALRRATTAAEWELTPGATTETDALGVIDAERPHALVAFGGFEHLVSLVRDRFPAMRIVTDRDTPGASAVAPSHDHVREVLRSLARPGGPILESS
Ga0102752_14905581	3300030783	Soil	HFSLATDAEALEALRHQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDTPGTNAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSHP
Ga0308206_10811732	3300030903	Soil	MCRAVKVLCVADDEESLSALRRATTAAEWELTAGATSETAALSVIDVERPPALVVFGGFEHLVWLVRDRFPAMRIVTDRDTPGASAVALTRDDVREVLRSLARPGGPILESS
Ga0308204_100394801	3300031092	Soil	DGRVRVRVVRRLPEARVALAVCRAVKVLCVATDAEALEALRRQTTAAEWELTPGATNETDALGLIDSERPHTMVAFGGFERLVALARDRFPAMRIVTDRDTPGTNAVASSRDDVRELLRSLGRPGGPIVDGLGAQPPQGSQP
Ga0299914_110907712	3300031228	Soil	VCRAVKVLCVATDDEGLGTLRRATTAAEWELTPGATNETDALGVIDAERPHAMVVFGSYETLVSLVRDRFPAMRIVTDRDAPGTSAVASSRDDVREVLRSLARPGGPIVEGTGAQPPQGAQP
Ga0307405_108244442	3300031731	Rhizosphere	VALAVCRAVRVLCVADDEVTVAALRRATVAAEWELVHAATTEAEALGLIDAERPHALVVFGDFDRLVDLVRERFPAMRIVTDRPVRGASAVVASPDEVRETLRALGRPGGPVRAPTDG
Ga0310907_104967282	3300031847	Soil	MGLAVCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRTVLRTLARPGGPVLPQA
Ga0307410_111633982	3300031852	Rhizosphere	VTVAALRRATVAAEWELVQAATTEAEALGLIDAERPHALVVFGDFDRLVDLVRERFPAMRIVTDRPVRGASAVVASPDEVRETLRALGRPGGPVRAPTDG
Ga0310904_104194772	3300031854	Soil	MGLAVCRALKVLCIADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSIVVFGPHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRSVLRTLARPGGPIVDVS
Ga0310900_104533801	3300031908	Soil	DALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVARSHEDVRSVLRTLARPGGPIVDVS
Ga0310895_103583151	3300032122	Soil	MGLAVCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSMVVFGQHDAFVALVRERFPAMRIVTDRETEGASAVAPSHEDVRTVLRTLARPGGPIVDVP
Ga0307415_1002181942	3300032126	Rhizosphere	VCRAVRVLCLADDEVTVAALRRATVAAEWELVQAATTEAEALGLIDAERPHALVVFGDFDRLVDLVRERFPAMRIVTDRPVRGASAVVASPEEVRETLRALGRPGGPVRAPTDG
Ga0310896_103048132	3300032211	Soil	MGLAVCRALKVLCVADDAPSLDALRRATIAAEWELTPGATNETDALATIDAERPQSIVVFGPHDAFVALVRERFPAMRIVTDRETEGTSAVARSHEDVRTVLRTLARPGGPVLPQA
Ga0214472_102802873	3300033407	Soil	VCRAVKVLCVAGDEESLAALRRATTAAEWELTLGATSEIDALAVVDVERPHAVVAFGDFGGLVSLVRERFPAMRIVTDRTTPGANAVAASREDVRELLRSLPRPG
Ga0214471_104219512	3300033417	Soil	LCRAVKVLCVAVDEESLSALRRATTAAEWELTPGATSETDALAVVDAEQPHALVAFGDYGRLVSLVRERFPAMRIVTDRTTPGANAVAASREDVRELLRSLPRPGGPIQRSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081021

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences