Metagenome Family F081004

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081004
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	69 residues
Representative Sequence	GEAGTYEVTPGNLITMRPIASKNPAVMGPGVFITYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE
Number of Associated Samples	93
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.26 %
% of genes near scaffold ends (potentially truncated)	92.98 %
% of genes from short scaffolds (< 2000 bps)	96.49 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.860 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.403 % of family members)
Environment Ontology (ENVO)	Unclassified (31.579 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.509 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.33% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF13360	PQQ_2	3.51
PF07995	GSDH	3.51
PF07676	PD40	3.51
PF00561	Abhydrolase_1	3.51
PF02585	PIG-L	2.63
PF02635	DrsE	2.63
PF00072	Response_reg	1.75
PF01436	NHL	1.75
PF02566	OsmC	1.75
PF06078	DUF937	1.75
PF04951	Peptidase_M55	1.75
PF00498	FHA	1.75
PF02687	FtsX	1.75
PF00106	adh_short	0.88
PF01804	Penicil_amidase	0.88
PF13421	Band_7_1	0.88
PF13564	DoxX_2	0.88
PF03449	GreA_GreB_N	0.88
PF03551	PadR	0.88
PF13474	SnoaL_3	0.88
PF00903	Glyoxalase	0.88
PF03712	Cu2_monoox_C	0.88
PF16656	Pur_ac_phosph_N	0.88
PF03069	FmdA_AmdA	0.88
PF01408	GFO_IDH_MocA	0.88
PF01011	PQQ	0.88
PF13460	NAD_binding_10	0.88
PF00999	Na_H_Exchanger	0.88
PF13649	Methyltransf_25	0.88
PF13683	rve_3	0.88
PF00069	Pkinase	0.88
PF13886	DUF4203	0.88
PF08241	Methyltransf_11	0.88
PF07690	MFS_1	0.88
PF00226	DnaJ	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.51
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	3.51
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	2.63
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	1.75
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	1.75
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	1.75
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.88
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.88
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.88
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.88
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.88
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.88
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.88
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.88
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.88
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.88
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.86 %
Unclassified	root	N/A	6.14 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.28 %
Unclassified	root	N/A	6.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.39 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.04 %
Unclassified	root	N/A	6.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.88 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.04 %
Unclassified	root	N/A	6.14 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.75 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.88 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.88 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.04 %
Unclassified	root	N/A	6.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.75 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.88 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.88 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.88 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.88 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.04 %
Unclassified	root	N/A	6.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.75 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.88 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.88 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.04 %
Unclassified	root	N/A	6.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.75 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.88 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.88 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.04 %
Unclassified	root	N/A	6.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.75 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.88 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.88 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.88 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.88 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.88 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_11723170	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300000955\|JGI1027J12803_104360561	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300002912\|JGI25386J43895_10059397	All Organisms → cellular organisms → Bacteria → Acidobacteria	1073	Open in IMG/M
3300004479\|Ga0062595_100140263	All Organisms → cellular organisms → Bacteria → Acidobacteria	1383	Open in IMG/M
3300005093\|Ga0062594_103250818	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300005293\|Ga0065715_10515450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	768	Open in IMG/M
3300005295\|Ga0065707_10286534	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300005295\|Ga0065707_10928562	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005331\|Ga0070670_102020851	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300005332\|Ga0066388_106126347	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300005332\|Ga0066388_108796551	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300005335\|Ga0070666_11195009	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005345\|Ga0070692_10863172	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300005354\|Ga0070675_100158082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1947	Open in IMG/M
3300005451\|Ga0066681_10725706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	603	Open in IMG/M
3300005548\|Ga0070665_101047378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300005552\|Ga0066701_10442208	Not Available	807	Open in IMG/M
3300005564\|Ga0070664_101002349	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300005618\|Ga0068864_100282950	All Organisms → cellular organisms → Bacteria → Acidobacteria	1548	Open in IMG/M
3300005713\|Ga0066905_100256945	All Organisms → cellular organisms → Bacteria → Acidobacteria	1346	Open in IMG/M
3300005719\|Ga0068861_100773771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	899	Open in IMG/M
3300005764\|Ga0066903_104730955	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300005764\|Ga0066903_108728208	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300005844\|Ga0068862_102552596	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300006846\|Ga0075430_100830875	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300006880\|Ga0075429_101172615	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300006881\|Ga0068865_101823985	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300006904\|Ga0075424_100069202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3695	Open in IMG/M
3300006914\|Ga0075436_100198339	All Organisms → cellular organisms → Bacteria → Acidobacteria	1421	Open in IMG/M
3300006969\|Ga0075419_10407944	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300007076\|Ga0075435_101791953	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300009094\|Ga0111539_10384234	All Organisms → cellular organisms → Bacteria	1635	Open in IMG/M
3300009094\|Ga0111539_12473738	Not Available	602	Open in IMG/M
3300009100\|Ga0075418_12437612	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009101\|Ga0105247_11403042	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300009137\|Ga0066709_101277740	All Organisms → cellular organisms → Bacteria → Acidobacteria	1078	Open in IMG/M
3300009147\|Ga0114129_10768553	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300009148\|Ga0105243_11915107	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009156\|Ga0111538_13753028	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300009162\|Ga0075423_11732545	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300010043\|Ga0126380_11072053	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300010360\|Ga0126372_11218425	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300010362\|Ga0126377_10027468	All Organisms → cellular organisms → Bacteria	4768	Open in IMG/M
3300010362\|Ga0126377_12709617	All Organisms → cellular organisms → Bacteria → Acidobacteria	571	Open in IMG/M
3300010366\|Ga0126379_10470284	Not Available	1323	Open in IMG/M
3300010366\|Ga0126379_11405735	Not Available	804	Open in IMG/M
3300010397\|Ga0134124_10837903	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300010399\|Ga0134127_11661825	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300010399\|Ga0134127_12782759	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	569	Open in IMG/M
3300010399\|Ga0134127_13101775	All Organisms → cellular organisms → Bacteria → Acidobacteria	542	Open in IMG/M
3300010400\|Ga0134122_12236985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	591	Open in IMG/M
3300012469\|Ga0150984_123667180	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300012532\|Ga0137373_10805300	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300012930\|Ga0137407_12091378	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M
3300012955\|Ga0164298_10672686	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	722	Open in IMG/M
3300012960\|Ga0164301_11526534	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300012985\|Ga0164308_11716305	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300013306\|Ga0163162_11264924	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300014326\|Ga0157380_10169475	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300014326\|Ga0157380_12241743	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300014861\|Ga0180061_1064852	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300015371\|Ga0132258_11602300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1643	Open in IMG/M
3300015371\|Ga0132258_11930134	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300015372\|Ga0132256_101754465	All Organisms → cellular organisms → Bacteria → Acidobacteria	729	Open in IMG/M
3300015372\|Ga0132256_102364413	Not Available	634	Open in IMG/M
3300015372\|Ga0132256_102396108	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300015372\|Ga0132256_103528098	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300015373\|Ga0132257_102060215	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	737	Open in IMG/M
3300015373\|Ga0132257_102420713	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300015373\|Ga0132257_103776188	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300015374\|Ga0132255_101706268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	956	Open in IMG/M
3300016319\|Ga0182033_11621784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300018073\|Ga0184624_10224979	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300018079\|Ga0184627_10039596	All Organisms → cellular organisms → Bacteria → Acidobacteria	2410	Open in IMG/M
3300018422\|Ga0190265_11781322	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300018422\|Ga0190265_12123100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	666	Open in IMG/M
3300021432\|Ga0210384_11151340	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300022756\|Ga0222622_11037451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	603	Open in IMG/M
3300025900\|Ga0207710_10157526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300025901\|Ga0207688_10324578	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300025923\|Ga0207681_10985128	Not Available	707	Open in IMG/M
3300025925\|Ga0207650_10851803	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300025936\|Ga0207670_11307608	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300025937\|Ga0207669_11901936	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300025940\|Ga0207691_10982688	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300025941\|Ga0207711_10642843	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300025941\|Ga0207711_11789005	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300025941\|Ga0207711_12111407	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300025960\|Ga0207651_11660880	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300026023\|Ga0207677_11319423	Not Available	663	Open in IMG/M
3300026088\|Ga0207641_10145768	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300026142\|Ga0207698_11362306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300027907\|Ga0207428_10274758	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300028380\|Ga0268265_10424165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300028814\|Ga0307302_10658092	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300031199\|Ga0307495_10099781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300031366\|Ga0307506_10156824	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300031562\|Ga0310886_10240744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300031740\|Ga0307468_100749410	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300031795\|Ga0318557_10336404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300031831\|Ga0318564_10228422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300031854\|Ga0310904_10359461	All Organisms → cellular organisms → Bacteria → Acidobacteria	941	Open in IMG/M
3300031858\|Ga0310892_11407623	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300031896\|Ga0318551_10322953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300032013\|Ga0310906_10527126	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300032013\|Ga0310906_10971232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300032065\|Ga0318513_10360161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300032094\|Ga0318540_10226555	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300032174\|Ga0307470_10129115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1508	Open in IMG/M
3300032174\|Ga0307470_11880939	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300032179\|Ga0310889_10107598	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300032205\|Ga0307472_100665901	All Organisms → cellular organisms → Bacteria → Acidobacteria	930	Open in IMG/M
3300032205\|Ga0307472_102115752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300033433\|Ga0326726_12164189	All Organisms → cellular organisms → Bacteria → Acidobacteria	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.51%
Host-Associated	Host-Associated	46.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Plants	Host-Associated → Plants	46.49%
Aquatic	Environmental → Aquatic	3.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.91%
Sediment	Environmental → Aquatic → Sediment	3.51%
Peat	Environmental → Terrestrial → Peat	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.77%
Loam	Environmental → Terrestrial → Soil → Loam	7.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.02%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.26%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.39%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.75%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.75%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.75%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_117231701	3300000550	Soil	AGTYEVTDGKVITMRPLAAKNPAAMVPGAFIVYSYKLDGDTLWVTQXXXXNGPFPNPFALKLVRVE*
JGI1027J12803_1043605613	3300000955	Soil	FVSEAGTYEVTPGSLITMRPIASKNPAVMGPGIFITYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
JGI25386J43895_100593973	3300002912	Grasslands Soil	YEVTPGSLITMRPIASKNPAVMGPGVFITYAYRLDGDTLSLTQQRNQNGPFAAPFTLKLMRVE*
Ga0062595_1001402631	3300004479	Soil	VAGNLITMRPIASKNPAVMGPGVFITYSYKLEGDTLSLTQQRNQNGPFPNPFSFKAVRVE
Ga0062594_1032508182	3300005093	Soil	IPGDVATATADDLRAVWGPFVGEAGTYELTSDNRMTMRPIAAKNPAVMGPGVFITYSYKLDGDTIWVTQQRNQHGPFANPVTIKAVRIE*
Ga0065715_105154501	3300005293	Miscanthus Rhizosphere	WGPFVSEAGTYEVTPGSLITMRPIASKNPAVMGPGIFITYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0065707_102865341	3300005295	Switchgrass Rhizosphere	TPGGLVTMRPVASKNPAVMGPGVFITYAYKVDGNTLSLTQERNQNGPFPNPFTLKLVRVE
Ga0065707_109285621	3300005295	Switchgrass Rhizosphere	GPFVGEAGTYEVAADNRLTMRPVAAKNPAVMGPGVFITYSYKLDGNTMWVTQQRNQNGPFANPVTVKVMRVE*
Ga0070670_1020208511	3300005331	Switchgrass Rhizosphere	AWGPFVSEAGTYEVAPGGVVTMRPIASKNPAVMGQGVFITYTYKLDGDTLSLTQQRNQNGLFANPFALKLMRVE*
Ga0066388_1061263472	3300005332	Tropical Forest Soil	EAGTYEVTPGSLITMRPIASKNPAVMGPGVFITYSYKLEGDTLSLTQQRNQNGPFANPFTLRLTRVE*
Ga0066388_1087965511	3300005332	Tropical Forest Soil	YELSDNLITVRPIVSKNPAVMGEGVFITYSLKREGNTMWMTQQRNQAGPFANPFTIKVVRIE*
Ga0070666_111950091	3300005335	Switchgrass Rhizosphere	WGPFVSEAGTYEVAPGGLVTMRPIASKNPAVMGPRVFITYSYKMDATTLSLTQQRNQDGPFANPFTLKLVRVE*
Ga0070692_108631721	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	AWGPFVAEGGTYEVTNGNLLTVRPIAAKNPAVMGPGVFITYSYKLEGDTIWVTQQRNQNGPFPNPVTFKSVRVE*
Ga0070675_1001580821	3300005354	Miscanthus Rhizosphere	YEVAPGGVVTMRPIASKNPAVMGQGVFITYTYKLDGDTLSLTQQRNQNGLFANPFALKLMRVE*
Ga0066681_107257061	3300005451	Soil	PFVSEAGTYEVTPGGVITMRPIASKNPAVMGPGVFITYSYKLDGDTLLLTQQRNNNGPFANPFTLKLVRVE*
Ga0070665_1010473782	3300005548	Switchgrass Rhizosphere	AAWGPFVSEAGTYEVAPGGVVTMRPIASKNPAVMGQGVFITYAYKLDGDTLSLTQQRNQNGLFANPFALKLVRVE*
Ga0066701_104422081	3300005552	Soil	YEMTPGSLITMRPIASKNPAVMGPGVFITYSYKLEGDTLSLTQQRNQGGAFANPFTLKFVRVE*
Ga0070664_1010023492	3300005564	Corn Rhizosphere	PFVGEAGTYELTSDNRMTMRPIAAKNPAVMGPGVFITYSYKLDGDTIWVTQQRNQHGPFANPVTIKAVRIE*
Ga0068864_1002829501	3300005618	Switchgrass Rhizosphere	YEVAGNLITMRPIASKNPAVMGPGVFITYSYKLEGDTLSLTQQRNQNGPFPNPFSFKAVRVE*
Ga0066905_1002569452	3300005713	Tropical Forest Soil	GEAGTYEVTPGNLITMRPIASKNPAVMGPGVFITYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0068861_1007737712	3300005719	Switchgrass Rhizosphere	RAAWGPFVSEAGTYEVAPGGLVTMRPIASKNPAVMGPGVFITYAYTLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0066903_1047309551	3300005764	Tropical Forest Soil	WGPFVGEAGTYEVTSGNVITMRPIASKNPAVMGPGIFITYAYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0066903_1087282081	3300005764	Tropical Forest Soil	ATADELRAVWGPVVAETGTYELGPAGVITMRPIASKNPAVMGPSVFIAYSYALNGDTLSLTQQRNQNGPFANPFSLRLVRVE*
Ga0068862_1025525962	3300005844	Switchgrass Rhizosphere	ETTGDSITMRPIASKNPAIMGAGVFITYTYKLDGDTLSLTQQRNQAGPFTNPFSLKLVRVE*
Ga0075430_1008308753	3300006846	Populus Rhizosphere	YDVAAGNLITMRPIASKNPAVMGAGVFITYTYTVEGDTLSLTQQRNQNGPFPAPFALKLTRVE*
Ga0075429_1011726151	3300006880	Populus Rhizosphere	WGPFVGEAGTYELTSDNLMTMRPIVSKNPAVMGPGVFITYSLKREGDTMWVTQQRNQNGPFANPFTIKVVRIE*
Ga0068865_1018239852	3300006881	Miscanthus Rhizosphere	YEVTPGGVVTMRPLASKNPAVMGPGVFITYAYRLDGDTLSLTQQRNQNGPFPNPFTLKLVRVE*
Ga0075424_1000692021	3300006904	Populus Rhizosphere	TPGGLMTVRPIASKNPAVMGPGVFITYAYKLDGNTLSLTQQRNQNGPFTNPFTLKLARLE
Ga0075436_1001983392	3300006914	Populus Rhizosphere	RAAWGPFVSEAGTYDVTPAGLITMRPIASKNPAVMGPGVFITYAYTLNGDTLSLTQQRNQTGPFANPFTLKLVRVE*
Ga0075419_104079441	3300006969	Populus Rhizosphere	ADELRAAWGPLVAESGTYDVAAGNLITMRPIASKNPAVMGAGVFITYTYTVEGDTLSLTQQRNQNGPFPAPFALKLTRVE*
Ga0075435_1017919531	3300007076	Populus Rhizosphere	VWGPFVGEAGTYEMTPGGLITMRPIASKNPAVMGPGVFITYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0111539_103842341	3300009094	Populus Rhizosphere	WGPFVAESGTYDVAAGNLITMRPIASKNPAVMGPGVFITYTYTLEGDTLSLTQQRNQNGPIPSPFMLKLTRVE*
Ga0111539_124737381	3300009094	Populus Rhizosphere	AGTYEVTPGNVITMRPIASKNPAVMGPGVFISYSYKLEGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0075418_124376122	3300009100	Populus Rhizosphere	WGPFVAEAGTYKVTGDLITMRPIASKNPAVMGPGVFITYSYKLTGDRLSVTQQRNEKAAFANPVTFTLVRVE*
Ga0105247_114030422	3300009101	Switchgrass Rhizosphere	EAGTYEVTPGSLITMRPIAAKNPAVMGSGVFITYTYKLDGDTIWVTQQRNQHGPFANPVTIKAVRIE*
Ga0066709_1012777401	3300009137	Grasslands Soil	VTPGSLVTMRPIASKNPAVMGPGVFITYSYKLDGNTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0114129_107685531	3300009147	Populus Rhizosphere	DELRAVWGPFVAESGTYDVAGGNLITMRPIASKNPAVMGPGVFITYTYTLEGDTLSLTQQRNQTGPFASPFTLKLTRVE*
Ga0105243_119151072	3300009148	Miscanthus Rhizosphere	PFVSEAGTYEVAPGGLVTMRPIASKNPAVMGPRVFITYSYKMDATTLSLTQQRNQDGPFANPFTLKLVRVE*
Ga0111538_137530281	3300009156	Populus Rhizosphere	GTYELTSGSVITMRPIASKNPAVMGPRVFITYSYKLDGDTLSLTQQRNQDGPFSNPFTLRLVRVE*
Ga0075423_117325451	3300009162	Populus Rhizosphere	PGSLVTMRPIASKNPAVMGPGVFITYSYKPDGNTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0126380_110720531	3300010043	Tropical Forest Soil	VWGPFVGEAGTYELTPGGVITMRPIASKNPAVMGPGVFITYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0126372_112184251	3300010360	Tropical Forest Soil	VSEAGTYEATSGGVITMRPIASKNPAVMGPGVFITYVYKLEGNTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0126377_100274681	3300010362	Tropical Forest Soil	KATADELRAAWGPFVSEAGTYELSAGSVITMRPIASKNPAVMGPGVFIAYVYKLEGNTLSLTQQRNQNGPFPSPFTLKLVRVE*
Ga0126377_127096171	3300010362	Tropical Forest Soil	VTPDDLITMRPIASKNPAVMGPGVFIAYIYKLDGDVLSLTQQRNQTGPFTNPFSLKLVRLEKH*
Ga0126379_104702842	3300010366	Tropical Forest Soil	RAAWGPFVAEAGTYEVTSGGLVTMRPIAAKNPAVMGPGVFITYAFKLEGNSLSLTQQRNQSGPFNNPFTLKLVRVE*
Ga0126379_114057352	3300010366	Tropical Forest Soil	VTPGNVITMRPIASKNPAIMGPGIFITYSYTLDGDSLSLTQQRNQNGPFPNPFTLRLVRVE*
Ga0134124_108379031	3300010397	Terrestrial Soil	VWGPFVSEAGTYEVTPGGVITMRPIASKNPAVMGPGVFISYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0134127_116618253	3300010399	Terrestrial Soil	VTSGNVITMRPIASKNPAVMGPGVFITYSYTLDGDTLSLTQQRNQNGPFTSPFTLKLTRVE*
Ga0134127_127827591	3300010399	Terrestrial Soil	TYDVAAGNLITMRPIASKNPAVMGAGVFITYTYTVEGDTLSLTQQRNQNGPFPAPFALKLTRVE*
Ga0134127_131017752	3300010399	Terrestrial Soil	VTSGNVITMRPIASKNPAVMGPGVFITYSYTLDGDTLSLTQQRNQNGPFPSPFTLKLTRVE*
Ga0134122_122369851	3300010400	Terrestrial Soil	GTYDLTVDNQITLRPIAAKNAAVMGPGVFIAYSYKLDGDTMWVTQQRNQDGPFPNPVTVKVVRVE*
Ga0150984_1236671802	3300012469	Avena Fatua Rhizosphere	GPVVSEAGTYDVAAGSLITMRPIASKNPAVMGPGVFITYSYRLEGDTLSLTQQRNQNGPFPNPFTLRLTRVE*
Ga0137373_108053001	3300012532	Vadose Zone Soil	YEVTPGGLITMRPIVSKNPAVMGPVGFITYSYKLDVDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0137407_120913781	3300012930	Vadose Zone Soil	PFVSEAGTYEVTPGGLITMRPIASKNPAVMGPGVFITYAYTLDGDTLSLTQQRNQNGPFANPFALKLVRVE*
Ga0164298_106726861	3300012955	Soil	KASGDVWRAVWAPVVAEAGTYEATPDLITMRPIASKNPAVMGPGVFITYSYKLEGNTLVITQQRNQNGSFSNPFSLKLVRVESR*
Ga0164301_115265342	3300012960	Soil	FVSEAGTYEVTPGSSITMRPIASKNPAVMGPGVFITYAYKLDGRTLTLTQQRNQNGPFANPFSLKLERVE*
Ga0164308_117163052	3300012985	Soil	TWGPFVSEAGTYEVTAGKVITMRPIASKNPAVMGPGVFIAYTYKLEGDTLTLTQQRNQTGPFPNPFSFKLLRVE*
Ga0163162_112649241	3300013306	Switchgrass Rhizosphere	GTYEVTPGIITMRPIAAKNPAVMGPGVFISYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0157380_101694751	3300014326	Switchgrass Rhizosphere	AGTYEVAPGGVITMRPIASKNPAVMGQGVFITYSYKLDGNTLSLTQQRNQNGLFANPFALKLVRVE*
Ga0157380_122417432	3300014326	Switchgrass Rhizosphere	GPFVAESGTYDLAAGNLITMRPIASKNPAVMGPGVFITYTYTLEGDTLSLTQQRNQNGPFPSPFTLKLTRVE*
Ga0180061_10648521	3300014861	Soil	AGTYEVTAEGGMTMRPIAAKNPAVMGPGVFITYSYKLDGDTMWVTQQRNQNGPFANPVTVKVVRVE*
Ga0132258_116023001	3300015371	Arabidopsis Rhizosphere	ADELRAVWGPVVTEAGTYELTADGSITMRPIASKNPAVMGAGVFITYSYKLEGDSLTLTQVRNQAGPYANPFSLKLVRVE*
Ga0132258_119301343	3300015371	Arabidopsis Rhizosphere	PFVSEAGTYETTPDGLITMRPIAAKNPAVMGPGVFITYAYKLNGDTLSLTQQRNQNGPFPNPFTLKLVRVE*
Ga0132256_1017544651	3300015372	Arabidopsis Rhizosphere	VTAGNLITMRPIAAKNPAVMAPGVFITYSYKLDGDTIWVTQQRNEHGPFANPVTIKAVRIE*
Ga0132256_1023644131	3300015372	Arabidopsis Rhizosphere	RAVWGPFVSEAGTYEATPGGVITMRPIASKNPAVMGPGVFITYSYKLEGDTLSLTQQRNQNGPFANPFTLKLIRVE*
Ga0132256_1023961081	3300015372	Arabidopsis Rhizosphere	PFVSEAGTYELTPGSLITMRPIASKNPAVMGPGVFITYAYKLEGDSLSLTQARNQSGPFANPFTLRLTRVE*
Ga0132256_1035280982	3300015372	Arabidopsis Rhizosphere	EATKDGTITMRPIASKNPAVMGQGVFITYSYKLDGDTLSLTQQRNQNGPFANPFSLKFVRAE*
Ga0132257_1020602152	3300015373	Arabidopsis Rhizosphere	AVWGPFVSEAGTYEVTPGSLITMRPIASKNPAVMGPGIFITYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE*
Ga0132257_1024207131	3300015373	Arabidopsis Rhizosphere	EAGTYEATPGGLVTMRPIASKNPAVMGPGVFITYAYKLDGRTLTLTQQRNQNGPFANPFSLKLERVE*
Ga0132257_1037761881	3300015373	Arabidopsis Rhizosphere	DELRAVWGPVVSEAGTYELTEDGLITMRPIASKNPAVMGPGVFITYAYRLDGDTLSLTQRRNQNGPFVNPFTLKLMRVE*
Ga0132255_1017062683	3300015374	Arabidopsis Rhizosphere	ADELRAVWGPVVTEAGTYELTADGSITMRPIASKSPAVMGAGVFITYSYKLEGDSLTLTQVRNQAGPYANPFSLKLVRVE*
Ga0182033_116217842	3300016319	Soil	EAGTYEVAPGNLITMHPIASKNPAVMGPGVFITYAYTFEGDTLLLKQQRNQNGPFPNPFTLKLIRVE
Ga0184624_102249791	3300018073	Groundwater Sediment	VWGPFVGEAGTYEVTNGSVITMRPLAAKNPAAMVPGAFITYSYKLDGNTIWVTQQRNQQGPFANPVTIKAVRIE
Ga0184627_100395964	3300018079	Groundwater Sediment	VTTGNLITMRPIAAKNPAVMGSGVFITYSYKLDGDTIWVTQQRNENGPFANPVTIKAVRI
Ga0190265_117813222	3300018422	Soil	AAWGPFVGEAGTYEVTANNRITMRPIASKNPAVMGAGVFMTYSYKLDGATMWVTQERNQNGPFTNPVTAKIVRVE
Ga0190265_121231002	3300018422	Soil	ADAAKAGADELRAVWGPFVGEAGTYELTAPNEITMRPIAAKNPAVMLSGAFITYSFRMEGDTIWVTQQRNQNGPFSNPVTIKAVRVE
Ga0210384_111513402	3300021432	Soil	ELRAVWGPFVSEAGTYELAPGSLITMRPIASKNPAVMGPGVFITYSYKLDSDTLSLTQQRNQNGPFANPFTLKLVRVE
Ga0222622_110374511	3300022756	Groundwater Sediment	PFVGEAGTYEVAAGNLITMRPIAAKNPAVMGPGVFITYSYQLDGNTMWVTQQRNQHGPFANPVTVKVVRVE
Ga0207710_101575262	3300025900	Switchgrass Rhizosphere	VSEAGTYELAPGGLITMRPVASKNPAVMGPGVFITYSYKVEGDTLSLTQQRNQSGTFPNPFTLKLTRVE
Ga0207688_103245783	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	DELRAAWGPFVAEGGTYEVAGNLITMRPIASKNPAVMGPGVFITYSFKLEGDTLSLTQQRNQNGPFPNPFSFKAVRIE
Ga0207681_109851281	3300025923	Switchgrass Rhizosphere	TYEVTPGVITMRPIAAKNPAVMGPGVFISYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRVE
Ga0207650_108518031	3300025925	Switchgrass Rhizosphere	DELRAAWGPFVAEGGTYEVAGNLITMRPIASKNPAVMGPGVFITYSFKLEGDTLLLTQQRNQNGPFANPFSFKAVRVE
Ga0207670_113076081	3300025936	Switchgrass Rhizosphere	TYDLAAGNLITMRPIASKNPAVMGPGVFITYTYTLEGDTLSLTQQRNQNGPFPAPFALKLTRVE
Ga0207669_119019361	3300025937	Miscanthus Rhizosphere	EGGTYEATNGSLLTVRPIAAKNPAVMGPGVFITYSYKLEGDTIWVTQQRNQNGPFPNPVTFKSVRVE
Ga0207691_109826882	3300025940	Miscanthus Rhizosphere	EAGTYEATPDLITMRPIASKNPAVMGPGVFITYSYTLEGNTLVITQQRNQNGSFSNPFSLKLVRVESR
Ga0207711_106428431	3300025941	Switchgrass Rhizosphere	PFVSEAGTYEVTPGSLITMRPIASKNPAVMGPGIFITYSYKLDDDTLSLTQQRNQNGPFANPFTLKLVRVE
Ga0207711_117890052	3300025941	Switchgrass Rhizosphere	WGPFVSEAGTYELTSGSLITMRPIASKNPAVMGPGVFITYSYKLEGDSLSLTQDRNQNGPFANPFTLRLTRVE
Ga0207711_121114071	3300025941	Switchgrass Rhizosphere	PFVAEAGTYEMAGDYLTMRPIASKNPAVMGPGVFITYSFTLNGDTLSVTQQRNEKSPFANPVTFKLVRVE
Ga0207651_116608802	3300025960	Switchgrass Rhizosphere	ELTQDGLITMRPIASKNPAVMGPGVFITYAYRLDGDTLSLTQQRNQNGPFVNPFTLKLTRVE
Ga0207677_113194231	3300026023	Miscanthus Rhizosphere	GTYDVTPDGLITMRPIASKNPAVMGAGVFITYAYRLDGDTLSLTQRRNQNGPFVNPFTLKLTRVE
Ga0207641_101457683	3300026088	Switchgrass Rhizosphere	DELRAAWGPFVSEAGTYELAPGGLITMRPVASKNPAVMGPGVFITYSYKVEGDTLSLTQQRNQSGTFPNPFTLKLTRVE
Ga0207698_113623061	3300026142	Corn Rhizosphere	YEVAPGNLVTMRPIASKNPAVMGPGVFITYSYTLDGDTLTLTQQRNANGPFPNPFTLKLVRVE
Ga0207428_102747584	3300027907	Populus Rhizosphere	VAESGTYDVAAGNLITMRPIASKNPAVMGPGVFLTYTYTLEGDTLSLTQQRNQNGPFPSPFTLKLTRVE
Ga0268265_104241651	3300028380	Switchgrass Rhizosphere	VTPGGLITMRPIASKNPAVMGSGVFITYSYKLDGDTLSLTQQRNQNGPFANPFTLKLVRV
Ga0307302_106580922	3300028814	Soil	VTPGSFITMRPTASKNPAVMGSGVFITYAYKLDGDTLSLTQQRNQNGPF
Ga0307495_100997811	3300031199	Soil	EVTPGGLVTMRPIASKNPAVMGPGVFITYSYKLEGDTLLLTQQRNQAGPFANPFTLKLVRVE
Ga0307506_101568241	3300031366	Soil	PGGVVTMRPIAAKNPAVMGPGVFITYAYKLDGDTLSLTQQRNQNGPFPNPFTLKLVRVE
Ga0310886_102407441	3300031562	Soil	TYEVAPGGVVTMRPIASKNPAVMGQGVFITYAYKLDGDTLSLIQQRNQNGLFANPFALKLVRVE
Ga0307468_1007494101	3300031740	Hardwood Forest Soil	ADDLRAVWGPFVGEAGTYELTSDNRITMRPIAAKNPAVMGPGVFITYSYRLDGDTMWVTQQRNQNGPFANPVTVKVVRVE
Ga0318557_103364041	3300031795	Soil	AGTYEVTPGGLVTMRPVASKNPAVMGPGVFITYAYTLDGNNLFLTQQRNQSGPFANPFTLKLVRVE
Ga0318564_102284221	3300031831	Soil	WGPFVSEAGTYEVTPGGLVTMRPVASKNPAVMGPGVFITYAYTLDGNNLFLTQQRNQSGPFANPFTLKLVRVE
Ga0310904_103594612	3300031854	Soil	AGTYEVTPGGLVTMRPIASKNPAVMGPGVFITYAYKLDGNTLSLTQQRNQNGPFANPFTLKLVRVE
Ga0310892_114076232	3300031858	Soil	AWGPFVSEAGTYEVTSGGLVTMRPIASKNPAVMGPGVFITYAYKLDGDTLALTQQRNQTGPFANPFALKLVRVE
Ga0318551_103229532	3300031896	Soil	LRAAWGPFVSEAGTYEVTPGGLVTMRPVASKNPAVMGPGVFITYAYKLDGNNLFLTQQRNQSGPFANPFTLKLVRVE
Ga0310906_105271261	3300032013	Soil	WGPVVCETGTYDVTKDGLITMRPIASKNPAVMGQGVFITYAYKLDGDTLSLTQQRNQNGPFANPFSLKFVRAE
Ga0310906_109712321	3300032013	Soil	YEVAPGGVVTMRPIASKNPAVMGQGVFITYAYKLDGDTLSLTQQRNQNGLFANPFALKLVRVE
Ga0318513_103601611	3300032065	Soil	AWGPFVSEAGTYEVTPGGLVTMRPVASKNPAVMGPGVFITYAYTLDGNNLFLTQQRNQSGPFANPFTLKLVRVE
Ga0318540_102265551	3300032094	Soil	YEVTSANVITMRPIASKNPAVMGSGIFITYAYKLEGDTLSLTQQRNQNGPFANPFTLKLVRVE
Ga0307470_101291152	3300032174	Hardwood Forest Soil	LRAAWGPFVGEAGAYEVTTGNLITMRPIAAKNPAVMGPGVFITYSYKLEGDTIWLTQQRNQNGPFPNPVTFKSVRVE
Ga0307470_118809391	3300032174	Hardwood Forest Soil	TYEVAGDLITMRPIASKNPAVMGPGVFITYAYKLDGDSLSLTQQRNQNGLFANPFALKLVRVE
Ga0310889_101075981	3300032179	Soil	EVTKDGLITMRPIASKNPAVMGEGVFITYAYKLEGDTLSLTQQRNQNGPFANPFSLKFVRAE
Ga0307472_1006659012	3300032205	Hardwood Forest Soil	VWGPVVSEAGTYDVTPDGLITMRPIASKNPAVMGAGVFITYAYRLDGDTLSLTQRRNQNGPFGNPFTLKLIRVE
Ga0307472_1021157522	3300032205	Hardwood Forest Soil	EVTPGGLVTMRPVASKNPAVMGQGVFITYAYRVDGNTLSLTQQRNQNGPFPNPFTLKLVRVE
Ga0326726_121641891	3300033433	Peat Soil	GPFVSEAGTYEVTPGSLITMRPIASKNPAVMGPGVFITYSYKLEGDTLSLSQQRNQNGPFANPFTLKLVRVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F081004

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences