Metagenome / Metatranscriptome Family F080793

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080793
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	149 residues
Representative Sequence	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGRHFLSQLASAVLTFALRGERQPWGAEDTAFVFRETFKAPPSDAQKAHDAILAYARKRPIVKTR
Number of Associated Samples	85
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	58.77 %
% of genes near scaffold ends (potentially truncated)	42.98 %
% of genes from short scaffolds (< 2000 bps)	75.44 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (55.263 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (21.053 % of family members)
Environment Ontology (ENVO)	Unclassified (42.105 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.719 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.05% β-sheet: 0.00% Coil/Unstructured: 54.95%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF10412	TrwB_AAD_bind	7.02
PF01402	RHH_1	2.63
PF13495	Phage_int_SAM_4	2.63
PF13470	PIN_3	1.75
PF10077	DUF2314	1.75
PF05593	RHS_repeat	1.75
PF05721	PhyH	1.75
PF08240	ADH_N	0.88
PF13289	SIR2_2	0.88
PF14690	zf-ISL3	0.88
PF13560	HTH_31	0.88
PF05598	DUF772	0.88
PF00589	Phage_integrase	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	1.75
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
All Organisms	root	All Organisms	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
cellular organisms	root	All Organisms → cellular organisms	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.02 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7.02 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.51 %
Holophagae	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3.51 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.51 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	2.63 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.75 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.88 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.88 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.88 %
Holophagales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	3.51 %
Geminicoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae	3.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	2.63 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.88 %
Holophagaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae	0.88 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.88 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Geminicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus	3.51 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	3.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Azospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira	2.63 %
Geothrix	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix	0.88 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.88 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.88 %
Chromobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group	0.88 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Geminicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	3.51 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	3.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Azospira oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae	2.63 %
unclassified Geothrix	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix	0.88 %
Steroidobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	0.88 %
Roseomonas wenyumeiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	0.88 %
Methylocystis bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	0.88 %
Chromobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Geminicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	3.51 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	3.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Azospira oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae	2.63 %
Geothrix sp. SG10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	0.88 %
unclassified Chromobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium → unclassified Chromobacterium	0.88 %
Steroidobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	0.88 %
Roseomonas wenyumeiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	0.88 %
Methylocystis bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.26 %
Geminicoccus roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	3.51 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	3.51 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.51 %
Azospira oryzae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae	2.63 %
Chromobacterium sp. LK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium → unclassified Chromobacterium → Chromobacterium sp. LK1	0.88 %
Geothrix sp. SG10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	0.88 %
Steroidobacter soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	0.88 %
Roseomonas wenyumeiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	0.88 %
Methylocystis bryophila	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10339114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Chromobacterium group → Chromobacterium → unclassified Chromobacterium → Chromobacterium sp. LK1	877	Open in IMG/M
3300004091\|Ga0062387_100444438	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300004091\|Ga0062387_101375353	Not Available	561	Open in IMG/M
3300004635\|Ga0062388_102709309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	522	Open in IMG/M
3300005591\|Ga0070761_10787347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	598	Open in IMG/M
3300005591\|Ga0070761_10938793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	548	Open in IMG/M
3300005994\|Ga0066789_10434424	Not Available	548	Open in IMG/M
3300006086\|Ga0075019_10033771	All Organisms → cellular organisms → Bacteria	2874	Open in IMG/M
3300009500\|Ga0116229_10039498	All Organisms → cellular organisms → Bacteria → Proteobacteria	4982	Open in IMG/M
3300009500\|Ga0116229_10059488	All Organisms → cellular organisms → Bacteria → Proteobacteria	3697	Open in IMG/M
3300009500\|Ga0116229_10447777	Not Available	1073	Open in IMG/M
3300009500\|Ga0116229_11480361	Not Available	537	Open in IMG/M
3300009624\|Ga0116105_1215511	Not Available	535	Open in IMG/M
3300009633\|Ga0116129_1007751	All Organisms → cellular organisms → Bacteria → Proteobacteria	4410	Open in IMG/M
3300009635\|Ga0116117_1045994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1075	Open in IMG/M
3300009665\|Ga0116135_1249220	Not Available	690	Open in IMG/M
3300009701\|Ga0116228_10133604	All Organisms → cellular organisms → Bacteria	1817	Open in IMG/M
3300009701\|Ga0116228_10257703	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300009701\|Ga0116228_10849983	Not Available	611	Open in IMG/M
3300009709\|Ga0116227_10078163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis bryophila	2778	Open in IMG/M
3300009787\|Ga0116226_10049543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4238	Open in IMG/M
3300010341\|Ga0074045_10173423	Not Available	1455	Open in IMG/M
3300010877\|Ga0126356_11257765	Not Available	519	Open in IMG/M
3300010880\|Ga0126350_10766390	Not Available	996	Open in IMG/M
3300011120\|Ga0150983_15371714	Not Available	578	Open in IMG/M
3300014162\|Ga0181538_10072824	Not Available	2078	Open in IMG/M
3300014164\|Ga0181532_10035264	All Organisms → cellular organisms → Bacteria	3423	Open in IMG/M
3300014165\|Ga0181523_10076665	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300014167\|Ga0181528_10456431	Not Available	700	Open in IMG/M
3300014169\|Ga0181531_10823490	Not Available	579	Open in IMG/M
3300014495\|Ga0182015_10958813	Not Available	533	Open in IMG/M
3300014654\|Ga0181525_10606898	Not Available	610	Open in IMG/M
3300014655\|Ga0181516_10643701	Not Available	548	Open in IMG/M
3300014838\|Ga0182030_10075291	All Organisms → cellular organisms → Bacteria	4945	Open in IMG/M
3300014838\|Ga0182030_10908694	Not Available	788	Open in IMG/M
3300017948\|Ga0187847_10062135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2102	Open in IMG/M
3300018043\|Ga0187887_10008992	All Organisms → cellular organisms → Bacteria → Proteobacteria	6882	Open in IMG/M
3300021171\|Ga0210405_10174015	Not Available	1706	Open in IMG/M
3300021388\|Ga0213875_10545921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300025463\|Ga0208193_1007023	All Organisms → cellular organisms → Bacteria → Proteobacteria	3781	Open in IMG/M
3300027609\|Ga0209221_1149345	Not Available	582	Open in IMG/M
3300027829\|Ga0209773_10094057	Not Available	1234	Open in IMG/M
3300027860\|Ga0209611_10037533	All Organisms → cellular organisms → Bacteria → Proteobacteria	4367	Open in IMG/M
3300027860\|Ga0209611_10048491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter soli	3464	Open in IMG/M
3300027898\|Ga0209067_10008085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	5656	Open in IMG/M
3300028577\|Ga0265318_10030581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2094	Open in IMG/M
3300028577\|Ga0265318_10031507	Not Available	2056	Open in IMG/M
3300028747\|Ga0302219_10133103	Not Available	949	Open in IMG/M
3300028748\|Ga0302156_10363271	Not Available	637	Open in IMG/M
3300028762\|Ga0302202_10572689	Not Available	502	Open in IMG/M
3300028776\|Ga0302303_10269000	Not Available	579	Open in IMG/M
3300028783\|Ga0302279_10191445	Not Available	972	Open in IMG/M
3300028798\|Ga0302222_10310450	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300028906\|Ga0308309_11821989	Not Available	514	Open in IMG/M
3300029882\|Ga0311368_10774043	Not Available	656	Open in IMG/M
3300029910\|Ga0311369_10955370	Not Available	680	Open in IMG/M
3300029911\|Ga0311361_10204748	All Organisms → cellular organisms → Bacteria	2421	Open in IMG/M
3300029911\|Ga0311361_10859041	Not Available	790	Open in IMG/M
3300029911\|Ga0311361_10948923	Not Available	730	Open in IMG/M
3300029913\|Ga0311362_10479896	Not Available	1167	Open in IMG/M
3300029913\|Ga0311362_10515965	Not Available	1103	Open in IMG/M
3300029913\|Ga0311362_10540601	Not Available	1063	Open in IMG/M
3300029922\|Ga0311363_11022340	Not Available	722	Open in IMG/M
3300029939\|Ga0311328_10900110	Not Available	583	Open in IMG/M
3300029943\|Ga0311340_10808354	Not Available	790	Open in IMG/M
3300029944\|Ga0311352_10945337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	666	Open in IMG/M
3300029951\|Ga0311371_10242146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae	2615	Open in IMG/M
3300029952\|Ga0311346_10992554	Not Available	679	Open in IMG/M
3300029952\|Ga0311346_11249894	Not Available	575	Open in IMG/M
3300029952\|Ga0311346_11298073	Not Available	559	Open in IMG/M
3300029954\|Ga0311331_10488031	Not Available	1208	Open in IMG/M
3300029955\|Ga0311342_11134229	Not Available	568	Open in IMG/M
3300029997\|Ga0302302_1310587	Not Available	567	Open in IMG/M
3300029999\|Ga0311339_11634796	Not Available	567	Open in IMG/M
3300030007\|Ga0311338_10695076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1029	Open in IMG/M
3300030007\|Ga0311338_10848534	Not Available	904	Open in IMG/M
3300030053\|Ga0302177_10282820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	889	Open in IMG/M
3300030399\|Ga0311353_11604868	Not Available	525	Open in IMG/M
3300030503\|Ga0311370_10245372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae	2366	Open in IMG/M
3300030520\|Ga0311372_11164263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	993	Open in IMG/M
3300030520\|Ga0311372_11945823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	692	Open in IMG/M
3300030580\|Ga0311355_11248885	Not Available	653	Open in IMG/M
3300030760\|Ga0265762_1005155	All Organisms → cellular organisms → Bacteria → Proteobacteria	2340	Open in IMG/M
3300030760\|Ga0265762_1039011	All Organisms → cellular organisms → Bacteria → Acidobacteria → Holophagae → Holophagales → Holophagaceae → Geothrix → unclassified Geothrix → Geothrix sp. SG10	924	Open in IMG/M
3300030906\|Ga0302314_10111956	All Organisms → cellular organisms → Bacteria → Proteobacteria	3636	Open in IMG/M
3300030906\|Ga0302314_11429600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300031234\|Ga0302325_10349895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Azospira → Azospira oryzae	2348	Open in IMG/M
3300031234\|Ga0302325_10549114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1724	Open in IMG/M
3300031236\|Ga0302324_101589707	Not Available	843	Open in IMG/M
3300031236\|Ga0302324_101870096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300031261\|Ga0302140_10404703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1099	Open in IMG/M
3300031470\|Ga0272432_1115168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	1271	Open in IMG/M
3300031472\|Ga0272437_1216204	Not Available	992	Open in IMG/M
3300031524\|Ga0302320_10473882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1531	Open in IMG/M
3300031670\|Ga0307374_10264497	Not Available	1132	Open in IMG/M
3300031671\|Ga0307372_10391296	Not Available	717	Open in IMG/M
3300031672\|Ga0307373_10330610	Not Available	941	Open in IMG/M
3300031672\|Ga0307373_10444317	Not Available	729	Open in IMG/M
3300031708\|Ga0310686_111814082	All Organisms → cellular organisms → Bacteria	4746	Open in IMG/M
3300031708\|Ga0310686_112189687	Not Available	500	Open in IMG/M
3300031708\|Ga0310686_112415304	Not Available	836	Open in IMG/M
3300031708\|Ga0310686_114168999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5688	Open in IMG/M
3300031711\|Ga0265314_10480277	Not Available	657	Open in IMG/M
3300031711\|Ga0265314_10641847	Not Available	542	Open in IMG/M
3300031718\|Ga0307474_11101082	Not Available	628	Open in IMG/M
3300031788\|Ga0302319_10022121	All Organisms → cellular organisms → Bacteria → Proteobacteria	11427	Open in IMG/M
3300031788\|Ga0302319_10750693	Not Available	978	Open in IMG/M
3300032515\|Ga0348332_12506506	Not Available	535	Open in IMG/M
3300032892\|Ga0335081_11636872	Not Available	705	Open in IMG/M
3300032895\|Ga0335074_10510857	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300032895\|Ga0335074_11387242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Geminicoccaceae → Geminicoccus → Geminicoccus roseus	571	Open in IMG/M
3300032898\|Ga0335072_10024470	All Organisms → cellular organisms → Bacteria	8448	Open in IMG/M
3300033134\|Ga0335073_10985690	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300033888\|Ga0334792_170937	Not Available	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.96%
Host-Associated	Host-Associated	14.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.54%
Aquatic	Environmental → Aquatic	18.42%
Plants	Host-Associated → Plants	14.04%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	39.47%
Soil	Environmental → Terrestrial → Soil	25.44%
Freshwater	Environmental → Aquatic → Freshwater	16.67%
Peat Moss	Host-Associated → Plants → Peat Moss	9.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.51%
Sediment	Environmental → Aquatic → Sediment	1.75%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	1.75%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.88%
Roots	Host-Associated → Plants → Roots	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	39.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.67%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	9.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.77%
Loam	Environmental → Terrestrial → Soil → Loam	4.39%
Clay	Environmental → Terrestrial → Soil → Clay	3.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	39.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.28%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	9.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.02%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.26%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.39%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.51%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.75%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	1.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	21.05%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	16.67%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	9.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.26%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.39%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.39%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.51%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.63%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.75%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.75%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	1.75%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.88%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.88%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.88%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.88%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.88%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009787	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031470	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley nord	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_103391141	3300004080	Bog Forest Soil	PDPGFDIPVATDNTPGPNERHFETIERLPGLSDPEAGYEAGRALRMIGHILDSQGSPVEHGRHFLSQLASAVLTFAMRGERQPWGAEDTAYVFREIFKAAPSDAQQASEGILAYARKRPIVTGR*
Ga0062387_1004444382	3300004091	Bog Forest Soil	FRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYETGRALRMIGHILDSQRSPVEHGRHFLSQPGNAVVSFALRGERQPWGAEDTAFVFRETFKAPPPDAQKADDAIMAYARQAADRQSGVAPAHQPPAPAG*
Ga0062387_1013753531	3300004091	Bog Forest Soil	MTDRPPLPKETTATRAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETIERLPGLSDPEAGYEAGRALRMIGHILDSQGSPVEHGRHFLSQLASAVLTFAMRGERQPWGAEDTAYVFREIFKAAPSDAQQASEGILAYARKRPIVTGR*
Ga0062388_1027093091	3300004635	Bog Forest Soil	MADRPMPKETVATRGAFRAGVKGLRYTENPDPDFDVPVMTDTVSGPNEKHFETVERLPGLSDPEAAFETGRALRMIGHILDSQSSPVEHGRHFLAQLGNAVLTFAMRGERQPWGAEDTAFVFRETFKATPTHDQEAYDAILAYARKRPPIITR*
Ga0070761_107873472	3300005591	Soil	VATRAAFRAGVKGLRYTENPDPDFDIPVATDTVPGPNEKHFETVERLPGLSDPEAAFEAGRALRMIGHILDSQRSPVEHGRHFLSQLGNAVVSFALRGERQPWGAEDTAFVFRETFKAPPPEAQKADDAILTYARKRPILTS*
Ga0070761_109387931	3300005591	Soil	RTAMNDRAPNPQATAATRGAFRAGVKGMRYTENPDPSFDIPVATDTPVGPIERHYETIERIPGLSDPEAAYETGRALRSIGTMLDRFGSPLEHGRSFLAQLANAVLYFAMRGERQPWGAEQTADLFVQGLQPEDVRQARESIVRYARQRPIVSAQPRAY*
Ga0066789_104344241	3300005994	Soil	MTDRPSMPHETVATRAAFRAGVKGLRYTENPDPGFDIPVATDTVPGPNERHFETVERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFALRGERQPWGAEDTAFVFRETFKAAPTDAQKAYDAILGYARKRPIVKAR*
Ga0075019_100337713	3300006086	Watersheds	MTDRPMPQATVATHAAFRAGVKGLRYTENPDPDFDIPVATDTVPGPNERHFETVERLPGLSDSEAAYEAGRALRMIGHILDSQSSPVEHGRHFLAQLGNAVVSFALRAERQPWGAEDTAFVFRETFKAASTDAQKAYDAILAYARKRPIVKAR*
Ga0116229_100394981	3300009500	Host-Associated	MTDRPSMAKGTGATRGAFRAGVKGTRYTENSDPDFDIPVATDTLPGPNELHFAAVEILPGLSNPEAAYETGRALRMIGHILDRHGSPIEHGQLFLSKLSQAVAHFASIGKRQPWGAEDTAFIFGETFKVPPSDARQAHEVILAYARKRPPIVKGR*
Ga0116229_100594882	3300009500	Host-Associated	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDTVPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQNSPVEHGRHFLSQLASAVLTFALRGERQPWGAEDTAFVFRETFKAAPPDAQRADDAILTYARKRPVVKVR*
Ga0116229_104477771	3300009500	Host-Associated	AAFRVGVKRTRYTENTDPDFDLPVATDNTPGPNESHFETLERLPGLSDREAAYETGQALRMIGHILDSQSSPVAHGRHFLSQLANAALTFALRGERQPWGAEDTAFAFRETFKALPSDAQKAYDDILAYARKRPIVKVRSDSRPAFCA*
Ga0116229_114803611	3300009500	Host-Associated	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLHVATDMVTGPNERHFETVERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFR
Ga0116105_12155111	3300009624	Peatland	MTDRASMPQQTVATRAAFRAGVKGLRYTENPDADFDIPVATDTVPGPNERHFETIERLPALSDPEAAYEAGRVLRMIGQDSQNSPVEHGRHFLSQLANAVLTFALRGERQPWGAEDTAFVFRETFKAAPTDAQKAYDAILAYARKR
Ga0116129_10077512	3300009633	Peatland	MTDRPPMLKETVATRAAFRAGVKGTRYTENPDPDFDVPVATDNAPGPNETHFETIERLPGLSGPEAAYETGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFGLRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVKTR*
Ga0116117_10459942	3300009635	Peatland	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYETGRALRMIGHILDSQGLSVEHGRHFLSQLVNAVLSFALRGESQPWGAEDTAFVFRETFKAAPTDAQRAYDAILDYARKRPIVKAR*
Ga0116135_12492201	3300009665	Peatland	MPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPTDS*
Ga0116228_101336042	3300009701	Host-Associated	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNAPGPNETHFETVERLPGLSDPHAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLAFAMRGERQPWGAEDTAFVFRETFKAPPTDAQKAHDAILAYARKRPIVKTR*
Ga0116228_102577032	3300009701	Host-Associated	MTARPPMPQETVATRAAFRAGVKGMRYTENPDPGFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLGNAVVSFALRGERQPWGAEDTAFVFRETFKAAPTDAQKAYDAILTYARKRPIVKAS*
Ga0116228_108499831	3300009701	Host-Associated	PIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNETHFEAVERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAPPADAQKAYDAILAYARKRPIVKAR*
Ga0116227_100781635	3300009709	Host-Associated	ETVATRAAFRAGVKGTRYTENPDPDFDRPVATDNAPGPNETHFETVERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILTYARASGRSSKQVRFQ*
Ga0116226_100495431	3300009787	Host-Associated	MPKETVATRAAFRVGVKGMRYTEHPDPGFDIPVATDTVPGPNERHFETIERVPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFREIFKAPPPDAQKAYDAILAYARKRPIVKAR*
Ga0074045_101734231	3300010341	Bog Forest Soil	MPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDTVPGPNEKHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQNSPVEHGRHFLSQLANAVLSFALRGERQPWGAEDTAFVFRETFKAASTDAQKAYDAILAYARKRPPVRAP*
Ga0126356_112577651	3300010877	Boreal Forest Soil	MPKETVATRAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETIERMPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFALRGERQPWGAEDTAFVFRETFKAPPPDAQKAYDAI
Ga0126350_107663902	3300010880	Boreal Forest Soil	MTDRPPRPKETVATRAAFRAGVKGMRYTENLDPDFDIPVATDTVPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFALRGERQPWGAEDTAFVFRETFKAAPTDSA
Ga0150983_153717141	3300011120	Forest Soil	VKGLCYTENPDPDFDIRVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQRSPVEHGRHLLSQLGNAVVSFAMRGERQPWGAEYAAFVFRETFKAAPPDAQKAYGAILAYARKRPIVNAR*
Ga0181538_100728242	3300014162	Bog	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNAPGPNETHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAPPSDAQKAHDAILAYARKRPIVKTR*
Ga0181532_100352642	3300014164	Bog	MTDRPPIPQETVATRAAFRAGVKGLRYTENPDPDFDLPVATDNTPGPNERHFETLERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLGNAVVSFALRGERQPWGAEDTAFVFRETFKAAPTDAQRANDAILDYARKRPIVKTR*
Ga0181523_100766655	3300014165	Bog	FRAGVKGTRYTENPDPDFDLPVATDNAPGPNETHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLSFALGGERQPWGAEDTAFVFRETFKAPPTDAQRANDAILDYARKRPIVKTR*
Ga0181528_104564311	3300014167	Bog	HAAFRVGVKGMRYTEHPDPDFDIPVATDNTPGPNERHFETVERLPCLSDPEAAYETGRALRMIGHILDSQGSPVEHGRHFLPKLGDAMMSFALRGERQPWGAEDTAFVFRETFKAPPPDAQKAYEAILAYARKRPPIVNAR*
Ga0181531_108234902	3300014169	Bog	MPQETVATRAAFRAGVKGMRYTENPDPGFDIPVATDTVPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQRSPVEHGRHFLSQLGNAVVSFALRGERQPWGAQDTAFVFRETFKAAPAAAQKADEAILTYAR
Ga0182015_109588131	3300014495	Palsa	MTDRPAMPKETVATRAAFRAGVKGMRYTEHPDPGFDLPVATDNSPGPNERHFETVERLPGLSDPEAAFEAGRALRMIGHILDSQGSPVEHGQRFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPPDAQKAHEAILAYARQRPPIVNVRR*
Ga0181525_106068981	3300014654	Bog	WALSSSPETPMTDRPPIPQETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYETGRALRMIGHILDSQGLSVEHGRHFLSQLVNAVLSFALRGESQPWGAEDTAFVFRETFKAAPTDAQRAYDAILDYARKRPIVKAR*
Ga0181516_106437011	3300014655	Bog	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETVERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLAGAVLTFALRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVKTR*
Ga0182030_100752913	3300014838	Bog	MTDRPPLPKETVATRAAFRVGVKGMRYTEHPDPSFDIPVATDTVPGPNERHFETIEHLPGLSDPEAAYETGRALRMIGGLLDSQGTPVQHGRLFLSQLGEAIVSFAFRGERQPWGAEDTAFVFREIFKAAPENAQQVHEAILAYARKRPPIVNAR*
Ga0182030_109086941	3300014838	Bog	MSDRRPIRQETVATRAAFRAGVKGMRYTENPDPDFDIPVVTDTSPGPNESHFKAIERLPGLSDPESAFETGRALRMIGYMLDSQNSPVEHGQHFLSQLGNAVLFFAMRGERQPWGAEDTAFVFLETFKAPPTAAQEARDAILAYARKRPIAGERRG*
Ga0187847_100621351	3300017948	Peatland	RPPMPQETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLAGAVLTFALRGERQPWGAEDTAFVFRETFKAAPTDAQKAYDAILAYARKRPIVKTR
Ga0187887_100089924	3300018043	Peatland	MTNRPPIPQETVATRAAFRVGVKGMRYTENPDPGFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYETGRALRMIGHILDSQGLSVEHGRHFLSQLVNAVLSFALRGESQPWGAEDTAFVFRETFKAAPTDAQRAYDAILDYARKRPIVKAR
Ga0210405_101740152	3300021171	Soil	MTDRPMPKETVATGAAFRAGVKGLRYTENPDPDFDLPVMTDNTPGPNEKHFESVERLPGLSDPEAAFETGRALRVIGHILDSQSSPVKHGRHFLAQLGNAVLTFAMRGERQPWGAEDTAFVFRETFKATPEHDQKAYDAILAYARKRPPLIKK
Ga0213875_105459211	3300021388	Plant Roots	GVKGLPYTENPDLGFDIPVLTDTVPGPNERHFETFKRLPGLSNPEAAFETGRALRMIGFMLDSQNSPVEHGQHFLSELANAVVFFAMRRECQPSGAEETASVFGKTFKATAPTAAQKAHDAILDYGRKRPIAKAR
Ga0208193_10070231	3300025463	Peatland	MLKETVATRAAFRAGVKGTRYTENPDPDFDVPVATDNAPGPNETHFETIERLPGLSGPEAAYETGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFGLRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVKTR
Ga0209221_11493451	3300027609	Forest Soil	MPGLNNATRAAFRAGVKGMRYTEHPDPDFDIPVATDTVPGPNERHFETIERLTGLSDPEAAYETGRALRMIGHILDSQQSPVEHGRHFLAQLGNAVVFFAMRGERQPWGAADMAFVFRETFKAPPADAQKADEAILAYARKRPIVKAR
Ga0209773_100940572	3300027829	Bog Forest Soil	MTHWALFLLVGDPMTDRPPMPQETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAGYEAGRALRMIGHILDSQGSPVEHGRHFLSQLASAVLTFAMRGERQPWGAEDTAYVFREIFKAAPSDAQQASEGILAYARKRPIVTGR
Ga0209611_100375331	3300027860	Host-Associated	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDTVPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQNSPVEHGRHFLSQLASAVLTFALRGERQPWGAEDTAFVFRETFKAAPPDAQRADDAILTYARKRPVVKVR
Ga0209611_100484915	3300027860	Host-Associated	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNETHFEAVERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVTAN
Ga0209067_100080853	3300027898	Watersheds	MTDRPMPQATVATHAAFRAGVKGLRYTENPDPDFDIPVATDTVPGPNERHFETVERLPGLSDSEAAYEAGRALRMIGHILDSQSSPVEHGRHFLAQLGNAVVSFALRAERQPWGAEDTAFVFRETFKAASTDAQKAYDAILAYARKRPIVKAR
Ga0265318_100305812	3300028577	Rhizosphere	MSDRRPIPLETLATRAAFRAGVKGMRYTEHPDPDFDVPVATDMPPGPNEVHFMALERLPGLSEPESAFETGRALRMIGYMLDTQSSPVEHGKHFLSQLGNAVLFFATRGERQPWGAEDTAFVFLETFKAPPTAAQKARDAILAYARKRPIAGTPQPR
Ga0265318_100315072	3300028577	Rhizosphere	MSDRRPIPQQTLATRAAFRAGVKGLRYTENPDPDFDIPVMTDTASGPNEKHFETVERVPGLSDPEAAFEAGRALRMIGHMLDSQGSPVEHGRHFLSQLGNAVLFFAMRGERQPWGAEDTAFVFLESFESPPAAAQKARDAILGYARKRPIAKAG
Ga0302219_101331031	3300028747	Palsa	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPGPNERHFESIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEDTAFVFRETFKAAPHAQKAYESILAYARKRPIVKAR
Ga0302156_103632711	3300028748	Bog	SSPETPMTERPPKPEETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFALRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVKGR
Ga0302202_105726891	3300028762	Bog	HPSMTDRPSMPQQTVATRAAFRAGVKGMRYTEHPDPGFDIPVVTDTAPGPNERHFETVECLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILAYARKRPIVKGR
Ga0302303_102690001	3300028776	Palsa	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPEFDIPVATDNTPGPNERHFETVERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVLSFALRGERQPWGAEDTAFVFRERFKAAPHAQKAYDAILAYARKRPIIKAG
Ga0302279_101914451	3300028783	Bog	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVKGR
Ga0302222_103104501	3300028798	Palsa	TRAAFRAGVKGLRYTENPDPEFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGRHFLSQLASAVLTFALRGERQPWGAEDTAFVFRETFKAPPSDAQKAHDAILAYARKRPIVKTR
Ga0308309_118219891	3300028906	Soil	ETVATRAAFRVGLNGTRYTENPDPEFDVPVATDNVPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQRSPVEHGRHFLSQLGNAVVSFALRGERQPWGAEDTAFVFRETFKAPPTDAQRADDAILTYARKRPVIKTR
Ga0311368_107740431	3300029882	Palsa	TPMTDRPSMPKATVATHAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETIEHLPCLSDPEAAYETGRALRMIGHILDSQGTPVEHGRLFLPQLGEAMMSFALRGERQPWGAEDTAFVFREIFKAPPPDAQKAYDAILAYARKRPIVNAR
Ga0311369_109553701	3300029910	Palsa	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPEFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEDTAFVFRETFKAAPHAQKAYDSILTYARKRPIVKA
Ga0311361_102047484	3300029911	Bog	MTGLPDNAYDTLGAFLLVGAFHPSMTDRPSMPQQTVATRAAFRAGVKGMRYTEHPDPGFDIPVVTDTAPGPNERHFETVECLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEYGQHFLSEVSSAVLTFALRGERQPWGAEDTAFVFRETFKAAPAHASGRSPRRGRSNNSRRRDP
Ga0311361_108590411	3300029911	Bog	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNAPGPNETHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAPPSDAQKAHDAILAYARKRPIVKTR
Ga0311361_109489231	3300029911	Bog	MTDRPIPQETVATRAAFRAGVKGLRYTENPDPDFDLPIATDNAPGANERHFETVERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILAYARKRPIVKGR
Ga0311362_104798961	3300029913	Bog	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFGLRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVKGR
Ga0311362_105159652	3300029913	Bog	MTERPPKPEETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILAYARKRPIVKGRCGE
Ga0311362_105406011	3300029913	Bog	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNAPGPNETHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAPPSDAQKA
Ga0311363_110223401	3300029922	Fen	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNAPGPNETHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILAYARKRPIVKTR
Ga0311328_109001101	3300029939	Bog	MTDRPPIPQETVATRAAFRGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFALRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVKGRCGE
Ga0311340_108083541	3300029943	Palsa	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPGPNERHFESIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEDTAFVFRETFKAAPHAQKAYESILAYARK
Ga0311352_109453371	3300029944	Palsa	RPPMTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPGPNERHFESIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEDTAFVFRETFKAAPHAQKAYESILAYARKRPIVKAR
Ga0311371_102421463	3300029951	Palsa	MTDRPPMPKETVATRAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETVERVPGLSDPEAAYETGRALRMIGHILDSQGSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPPDAQKAHEAILAYARQRPPIVNVRR
Ga0311346_109925542	3300029952	Bog	GRHHSARTRYTENPDPDFDLPVATDNAPGANERHFETVERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILAYARKRPIVKGR
Ga0311346_112498941	3300029952	Bog	MTDRPPLPKETVATRAAFRVGVKGMRYTEHPDPSFDIPVATDTVPGPNERHFETIEHLPGLSDPEAAYETGRALRMIGGLLDSQGTPVQHGRLFLSQLGEAIVSFAFRGERQPWGAEDTAFVFREIFKAAPENAQQVHEAILAYARKRPPIVNAR
Ga0311346_112980731	3300029952	Bog	HPSMTDRPSMPQQTVATRAAFRAGVKGMRYTEHPDPGFDIPVVTDTAPGPNERHFETVECLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEYGQHFLSEVSSAVLTFALRGERQPWGAEDTAFVFRETFKAAPAHAQKAHDAILGYARKRPVAKAR
Ga0311331_104880312	3300029954	Bog	MTERPPKPEETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFALRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVKGRCGE
Ga0311342_111342291	3300029955	Bog	MTDRPPIPQETVATRAAFRAGVKGTRYTENLDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILAYARKRPIVKGR
Ga0302302_13105871	3300029997	Palsa	EHPDPGFDIPVATDNTPGPNERHFETIEHLPCLSDPEAAYETGRALRMIGHILDSQGTPVEHGRLFLPQLGEAMMSFALRGERQPWGAEDTAFVFREIFKAPPPDAQKAYDAILAYARKRPIVNAR
Ga0311339_116347961	3300029999	Palsa	MTDRPPMPQETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETVERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEGTAFVFRERFKAAPHAQTAYDAILAYARKRPIVRG
Ga0311338_106950761	3300030007	Palsa	ATRAAFRAVVKGLRYTENPDPDFDIPVATDNTPGPGPNERHFESIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEDTAFVFRETFKAAPHAQKAYESILAYARKRPIVKAR
Ga0311338_108485341	3300030007	Palsa	MTDRPPMPQETVATRAAFRAGVKGLRYTENPDPEFDIPVATDNTPGPNERHFETVERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVLSFALRGERQPWGAEDTAFVFRERFKAAPHAQKAYDAILAYARKRPIIKAG
Ga0302177_102828202	3300030053	Palsa	MTDRPPLPKETVATRAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEDTAFVFRETFKAAPHAQKAYESILAYARKRPIVKAR
Ga0311353_116048681	3300030399	Palsa	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPGPNERHFESIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEDTAFVFRETFKAAPTDVQKAYDAILAYARKRPIIKAR
Ga0311370_102453723	3300030503	Palsa	MTDRPPMPRETTATRAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETTERIPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLGNAVLTFALRGERQPWGAEDTAFVFRETFKAPPPDAQKAYDAILTYARKRPIVNAR
Ga0311372_111642632	3300030520	Palsa	RAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPGPNERHFESIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALRGERQPWGAEDTAFVFRETFKAAPHAQKAYESILAYARKRPIVKAR
Ga0311372_119458231	3300030520	Palsa	MTDRPPMPKATVATNAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETIERLPGLSDAEAAYETGRALRMIGHILDSQGSPVEHGRHILSQLSEAMVSFALRGERQPWGAEDTAFVFRDMFKAVPHAQKAYDAILDYARKRPIVNAR
Ga0311355_112488851	3300030580	Palsa	MTDRPPMPKETVATRAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETIEHLPCLSDPEAAYETGRALRMIGHILDSQGTPVEHGRLFLPRLGEAMMSFALRGERQPWGAEDTAFVFRETFKAPPPDAQKAYDAILAYARKRPPIVNAR
Ga0265762_10051552	3300030760	Soil	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPIEHGRHFVSELGNAVVFFALRGERQPWGAEDTAFVFRETFKAPPTDAQRAHDAILGYARKRPIVNAR
Ga0265762_10390112	3300030760	Soil	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGRHFLSQLANAVLSFALRGERQPWGAEDTAFVFRETFKAPPTDAQRANDAILAYARKRPIVKTR
Ga0302314_101119565	3300030906	Palsa	MTDRPPMPKETVATRAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETVERVPGLSDPEAAYETGRALRMIGHILDSQGSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPPD
Ga0302314_114296002	3300030906	Palsa	NAAFRVGVKGMRYTEHPDPGFDIPVATDNTPGPNERHFETIERLPGLSDAEAAYETGRALRMIGHILDSQGSPVEHGRHILSQLSEAMVSFALRGERQPWGAEDTAFVFRDMFKAVPHAQKAYDAILDYARKRPIVNAR
Ga0302325_103498953	3300031234	Palsa	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGRHFLSQLASAVLTFALRGERQPWGAEDTAFVFRETFKAPPSDAQKAHDAILAYARKRPIVKTR
Ga0302325_105491141	3300031234	Palsa	GAMPLRRPRTDMTHWALSSSPETPMTDRPPMPQETVATRAAFRAGVKGMRYTENPDPGFDIPVATDNAPGPNERHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFVSQLGNAVVFFAMRGERQPWGAEDTAFVFRETFKAASANAQKAYDGILGYARKRPIVNAR
Ga0302324_1015897071	3300031236	Palsa	MTDRPPIPQETVATRAAFRADVKGTRYAENPDPDFDLPVATDNTPGPNETHFETVERLPGLSDPEAAYEAGRALRMIGHILDSRGSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPTDAQKAYDAILAYARKRPIVKVR
Ga0302324_1018700962	3300031236	Palsa	MTDRPPMPQETVATRAAFRAGVKGMRYTENPDPGFDIPVATDNAPGPNERHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFVSQLGNAVVFFAMRGERQPWGAEDTAFVFRETFKAASANAQKAYDGILGYARKRPIVNAR
Ga0302140_104047032	3300031261	Bog	MTERPPKPEETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILAYARKRPIVKGR
Ga0272432_11151682	3300031470	Rock	MSDRPPIPKETAATRGAFRAGVKGMRYTENPDPALDIPVETDAPVGPNERHFDAVERLPGLSEPEAAYEAGRALRMIGHLLDGQGSPVEHGQAFLSQLADAVLSFGLRGEHQPWGAENTAFVFLDTFKAPPA
Ga0272437_12162042	3300031472	Rock	MSDRQVPKETVATRAAFRAGVRGMRYTENPDPALDIQVVTDTVPGPNEHHFEVVERLPGLSEPEAAYEAGRALRMIGHLLDGQGSPVEHGQAFLSQLADAVLFFGLRGERQPWGAGDTAFVFLDTFKAPPTAAAQARDAIVAYASRRPELKPRGAG
Ga0302320_104738821	3300031524	Bog	TERPPKPEETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNAPGANERHFETVERLPGLSDPEAAYETGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAAPADAQKAHDAILAYARKRPIVKGR
Ga0307374_102644971	3300031670	Soil	MTDRPMPKETVATRAAFRAGVKGLRYTEHPDPDFDLPVVTDTVSGPNEKHFETVERLPGLSDPEAAFEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAVPTHDQKAYDAILAYAHKRPPVITR
Ga0307372_103912961	3300031671	Soil	MTDRPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVVTDTAPGPNEKHFETVEGLPGLSDPEAAFEAGRALRMIGHILDSQSSPVEHGDHFLFQLRNALLTFAMRGERQPWGGEDTAFVFRETFKAEPTHDQKAYDAILAYAR
Ga0307373_103306102	3300031672	Soil	MTDRPMPKETVATRAAFRAGVKGLRYTEHPDPDFDLPVVTDTVSGPNEKHFETVERLPGLSDPEAAFEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFK
Ga0307373_104443172	3300031672	Soil	MTDRPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVVTDTAPGPNEKHFETVEGLPGLSDPEAAFEAGRALRMIGHILDSQSSPVEHGDHFLFQLRNALLTFAMRGERQPWGGEDTAFVFRETFKAEPTHDQKAYDAILAYARKRPPVIGR
Ga0310686_1118140828	3300031708	Soil	MTDRPPMPQETVATRAAFRAGVKGLRYTENPDPDFDIPVATDTVPGPNERHFEPIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLASAVLTFALRGERQPWGAEDTAFVFRETFKAPPSDAQKAHDAILAYARKRPIVKTR
Ga0310686_1121896871	3300031708	Soil	GVKGLRYTENPDPDFDLPVATDNAPGPNERHFETIERLPGLSDPEAAFEVGRALRMIGHILDSQSSPVEHGRHFLAQLGNAVLSFALRGERQPWGAEDTAFVFRETFKAAPTDAQKAYDAILAYARKQPIVKVR
Ga0310686_1124153041	3300031708	Soil	AFRAGVKGMRYTENPDPDFDIPVMTDTASGPNEKHFETVERLPGLSDPEAAFETGRALRMIGHILDSQGSPVEHGRHFLAQLGNAVLTFAMRGERQPWGAEDTAFVFRETFKAAPKHDQEAHEAILAYARKRPPVITR
Ga0310686_1141689995	3300031708	Soil	MTDRPPMPKETVATRAAFRAGVKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQGSPVEHGQHILSQLANAVVSFALHGERQPWGAEDTAFVFRERFKAAPHAQKAYDAILAYARKRPIVKAG
Ga0265314_104802772	3300031711	Rhizosphere	MSDRRPIPQQTLATRAAFRAGVKGLRYTENPDPDFDIPVMTDTASGPNEKHFETVERVPGLSDPEAAFEAGRALRMIGHMLDSQGSPVEHGRHFLSQLGNAVLFFAMRGERQPWGAEDTAFVFLESFESPPAAAQKARDAILGY
Ga0265314_106418471	3300031711	Rhizosphere	AAFRAGVKGMRYTEHPDPDFDVPVATDMPPGPNEVHFMALERLPGLSEPESAFETGRALRMIGYMLDTQSSPVEHGKHFLSQLGNAVLFFATRGERQPWGAEDTAFVFLETFKAPPTAAQKARDAILAYARKRPIAGTPQPR
Ga0307474_111010821	3300031718	Hardwood Forest Soil	MIDRPSMPQETVATRAAFRAGIKGLRYTENPDPDFDIPVATDNTPGPNERHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPVEHGRHFLSQLANAVLTFALRGERQPWGAEDTAFVFRETFKAPPPDAQKAHDAILGYARKRPIVKTR
Ga0302319_1002212112	3300031788	Bog	MTDRPPIPQETVATRAAFRAGVKGTRYTENPDPDFDLPVATDNTPGPNEQHFETIERLPGLSDPEAAYEAGRALRMIGHILDSQSSPIEHGRHFLSQLANAVLTFAMRGERQPWGAEDTAFVFRETFKAPPADAQKAHDAILAYARKRPIVTGR
Ga0302319_107506931	3300031788	Bog	VATRAAFHAGVKGLRYTENPDPDFDIPVATDTVPGPNERHFETVERLPGLSDPEAAYEAGRALRMIGHILHSQGSPVEHGRHFLSQLANALLFFAMRGERQPWGAEDTAFVFRETFKAPPPDAQKAHDAILAYACKRPIVKSR
Ga0348332_125065061	3300032515	Plant Litter	GVKGMRYTEHPDPDFDVPVATDTVPGPNERHFETLERLPGLSDPEAAFEAGRALRMIGHILDSQNSPVEHGRHFLAQLGNAVVSFALRGERQPWGAEDTAFVFRETFKAPPTNAQKAYDAILGYARKRPIVQAR
Ga0335081_116368722	3300032892	Soil	MSDRPPIPKETVATRAAFRAGVKGMRYTENPEPGFDHAVATDTLPGPNECHFETIERIPGLSDPEAAFETGRALRMIGHILDSGNSPVEHGRHFLSQLANAVLFFALRGERQPWGAEDTAFMFLETFKPTPALAKQASDAILGYARKRPIASSRGR
Ga0335074_105108572	3300032895	Soil	KQTVATRAAFRAGVKGMRYTENPDPGFDIPVATDNTPGPNERHFETIEFLPGLSDPEAAFEAGRALRMIGHILDSQDAPVEHGQHFLSEVSNAVLFFALRGERQPWGAEDTAFVFPETCKAAPAQKAYDAILGYARKRPVATGR
Ga0335074_113872421	3300032895	Soil	AGVKGMRYTEHPDPGFDVPVVTDTPSGPNERHFEALERLPGLSEAEAAYETGRALRMIGHMLDSQNSPVEHGQHFLSQLGNAVLFFALRGERQPWGAEDTAFVFLETFKTAPANAQQARDAILSYARKRPIAGSRGR
Ga0335072_100244704	3300032898	Soil	MTDRASMPKQTVATRAAFRAGVKGMRYTENPDPGFDIPVATDNTPGPNERHFETIEFLPGLSDPEAAFEAGRALRMIGHILDSQDAPVEHGQHFLSEVSNAVLFFALRGERQPWGAEDTAFVFPETCKAAPAQKAYDAILGYARKRPVATGR
Ga0335073_109856901	3300033134	Soil	WAAVPPRKPPMTDRASMPKQTVATRAAFRAGVKGMRYTENPDPGFDIPVATDNTPGPNERHFETIEFLPGLSDPEAAFEAGRALRMIGHILDSQDAPVEHGQHFLSEVSNAVLFFALRGERQPWGAEDTAFVFPETCKAAPAQKAYDAILGYARKRPVATGR
Ga0334792_170937_131_532	3300033888	Soil	VKGLRYTEHPDPDFDLPVVTDTVSGPNEKHFETVERLPGLSDPEAAFETGRALRMIGHILDSQSSPVEHGRHFLAQLGNAVLTFAMRGERQPWGAEDTAFVFRETFKATPTHDQKAYDAILAYPRKRPPIIKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080793

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences