Metagenome Family F080791

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080791
Family Type	Metagenome
Number of Sequences	114
Average Sequence Length	60 residues
Representative Sequence	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAAPDTTQGA
Number of Associated Samples	76
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.48 %
% of genes near scaffold ends (potentially truncated)	29.82 %
% of genes from short scaffolds (< 2000 bps)	76.32 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.140 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (55.263 % of family members)
Environment Ontology (ENVO)	Unclassified (92.982 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (96.491 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 22.73% Coil/Unstructured: 77.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF04883	HK97-gp10_like	5.26
PF05709	Sipho_tail	1.75
PF04233	Phage_Mu_F	1.75

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG4722	Phage-related protein YomH	Mobilome: prophages, transposons [X]	1.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
All Organisms	root	All Organisms	43.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
cellular organisms	root	All Organisms → cellular organisms	42.98 %
Viruses	superkingdom	All Organisms → Viruses	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.09 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	5.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	9.65 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	5.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	9.65 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	5.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	9.65 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	5.26 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.14 %
Phenylobacterium zucineum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	5.26 %
Streptomyces cattleya	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cattleya	1.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.88 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000162\|TB03JUN2009H_c008183	Not Available	1593	Open in IMG/M
3300000176\|TB03JUN2009E_c008164	Not Available	1973	Open in IMG/M
3300000176\|TB03JUN2009E_c053645	Not Available	519	Open in IMG/M
3300000203\|TB18AUG2009E_c011983	Not Available	1057	Open in IMG/M
3300000203\|TB18AUG2009E_c029435	Not Available	573	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1020550	All Organisms → cellular organisms → Bacteria	3064	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1069309	Not Available	1127	Open in IMG/M
3300002091\|JGI24028J26656_1002711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cattleya	3181	Open in IMG/M
3300002091\|JGI24028J26656_1009452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cattleya	1234	Open in IMG/M
3300002091\|JGI24028J26656_1016558	Not Available	780	Open in IMG/M
3300002092\|JGI24218J26658_1015390	Not Available	1133	Open in IMG/M
3300002092\|JGI24218J26658_1026614	Not Available	736	Open in IMG/M
3300002098\|JGI24219J26650_1007613	Not Available	1998	Open in IMG/M
3300002301\|JGI24891J29808_1000996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7487	Open in IMG/M
3300002301\|JGI24891J29808_1016833	Not Available	617	Open in IMG/M
3300002307\|JGI24890J29729_1076812	Not Available	534	Open in IMG/M
3300002933\|G310J44882_10071173	Not Available	748	Open in IMG/M
3300003375\|JGI26470J50227_1033023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1012	Open in IMG/M
3300003375\|JGI26470J50227_1062092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	618	Open in IMG/M
3300003375\|JGI26470J50227_1064424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	600	Open in IMG/M
3300003375\|JGI26470J50227_1078208	Not Available	515	Open in IMG/M
3300003783\|Ga0007850_1000120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8168	Open in IMG/M
3300003789\|Ga0007835_1004328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1489	Open in IMG/M
3300003796\|Ga0007865_1000018	Not Available	28926	Open in IMG/M
3300003797\|Ga0007846_1004168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1742	Open in IMG/M
3300003798\|Ga0007842_1002697	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300003798\|Ga0007842_1013341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	529	Open in IMG/M
3300003804\|Ga0007817_1015675	Not Available	504	Open in IMG/M
3300003812\|Ga0007861_1000996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3188	Open in IMG/M
3300003814\|Ga0007877_1017925	Not Available	793	Open in IMG/M
3300003815\|Ga0007856_1006781	Not Available	813	Open in IMG/M
3300003820\|Ga0007863_1003421	All Organisms → cellular organisms → Bacteria	1878	Open in IMG/M
3300003820\|Ga0007863_1004124	Not Available	1660	Open in IMG/M
3300003823\|Ga0007875_1003080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2269	Open in IMG/M
3300004095\|Ga0007829_10010707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1760	Open in IMG/M
3300004095\|Ga0007829_10011265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1717	Open in IMG/M
3300004686\|Ga0065173_1075731	Not Available	606	Open in IMG/M
3300004692\|Ga0065171_1019968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1076	Open in IMG/M
3300004692\|Ga0065171_1042661	Not Available	729	Open in IMG/M
3300004770\|Ga0007804_1081367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	832	Open in IMG/M
3300004770\|Ga0007804_1114404	Not Available	683	Open in IMG/M
3300004806\|Ga0007854_10222420	Not Available	799	Open in IMG/M
3300006072\|Ga0007881_1026857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1570	Open in IMG/M
3300006103\|Ga0007813_1005316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3579	Open in IMG/M
3300006107\|Ga0007836_1070747	Not Available	763	Open in IMG/M
3300006112\|Ga0007857_1068260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300006119\|Ga0007866_1053302	Not Available	765	Open in IMG/M
3300006123\|Ga0007852_1105598	Not Available	624	Open in IMG/M
3300006128\|Ga0007828_1018953	Not Available	1447	Open in IMG/M
3300006128\|Ga0007828_1078566	Not Available	684	Open in IMG/M
3300006129\|Ga0007834_1035228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1255	Open in IMG/M
3300006129\|Ga0007834_1095082	Not Available	636	Open in IMG/M
3300009502\|Ga0114951_10203265	Not Available	1060	Open in IMG/M
3300010157\|Ga0114964_10002064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	14212	Open in IMG/M
3300013285\|Ga0136642_1000276	Not Available	30012	Open in IMG/M
3300013285\|Ga0136642_1012081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	2652	Open in IMG/M
3300013285\|Ga0136642_1014976	Not Available	2329	Open in IMG/M
3300013285\|Ga0136642_1015399	Not Available	2292	Open in IMG/M
3300013285\|Ga0136642_1017832	Not Available	2104	Open in IMG/M
3300013286\|Ga0136641_1004413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	5284	Open in IMG/M
3300013286\|Ga0136641_1023045	Not Available	1911	Open in IMG/M
3300020686\|Ga0214194_101041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3405	Open in IMG/M
3300020686\|Ga0214194_114114	Not Available	692	Open in IMG/M
3300020695\|Ga0214190_1002227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3022	Open in IMG/M
3300020707\|Ga0214238_1007557	Not Available	1425	Open in IMG/M
3300020710\|Ga0214198_1020195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	832	Open in IMG/M
3300020715\|Ga0214254_1021201	Not Available	882	Open in IMG/M
3300020716\|Ga0214207_1001482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5449	Open in IMG/M
3300020716\|Ga0214207_1002242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	3931	Open in IMG/M
3300020718\|Ga0214178_1013010	Not Available	1168	Open in IMG/M
3300020731\|Ga0214170_1001122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	7841	Open in IMG/M
3300020731\|Ga0214170_1005446	Not Available	2863	Open in IMG/M
3300021131\|Ga0214206_1004990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2301	Open in IMG/M
3300021131\|Ga0214206_1009825	Not Available	1386	Open in IMG/M
3300021133\|Ga0214175_1024883	Not Available	762	Open in IMG/M
3300021137\|Ga0214165_1078463	Not Available	662	Open in IMG/M
3300021137\|Ga0214165_1104142	Not Available	540	Open in IMG/M
3300021142\|Ga0214192_1183537	Not Available	512	Open in IMG/M
3300022555\|Ga0212088_10181790	Not Available	1706	Open in IMG/M
3300025339\|Ga0208502_1019576	Not Available	578	Open in IMG/M
3300025357\|Ga0208383_1000332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8904	Open in IMG/M
3300025357\|Ga0208383_1013396	Not Available	1014	Open in IMG/M
3300025358\|Ga0208504_1007159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1702	Open in IMG/M
3300025358\|Ga0208504_1013747	Not Available	1143	Open in IMG/M
3300025358\|Ga0208504_1030227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300025372\|Ga0207957_1011747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1184	Open in IMG/M
3300025372\|Ga0207957_1024624	Not Available	702	Open in IMG/M
3300025379\|Ga0208738_1021836	Not Available	1014	Open in IMG/M
3300025382\|Ga0208256_1000632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → Phenylobacterium zucineum	7550	Open in IMG/M
3300025389\|Ga0208257_1056595	Not Available	543	Open in IMG/M
3300025400\|Ga0208387_1017281	Not Available	1341	Open in IMG/M
3300025402\|Ga0208876_1025128	Not Available	984	Open in IMG/M
3300025403\|Ga0208745_1008853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1733	Open in IMG/M
3300025407\|Ga0208378_1005873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2821	Open in IMG/M
3300025410\|Ga0208875_1077442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300025417\|Ga0208616_1012333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1401	Open in IMG/M
3300025417\|Ga0208616_1022253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300025417\|Ga0208616_1051848	Not Available	589	Open in IMG/M
3300025429\|Ga0208500_1017026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300025450\|Ga0208744_1019559	All Organisms → Viruses → Predicted Viral	1445	Open in IMG/M
3300025598\|Ga0208379_1144998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300025723\|Ga0208741_10035344	Not Available	1168	Open in IMG/M
3300025778\|Ga0208388_1039460	Not Available	695	Open in IMG/M
3300025781\|Ga0208386_1019078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1059	Open in IMG/M
3300025781\|Ga0208386_1030576	Not Available	776	Open in IMG/M
3300025781\|Ga0208386_1049610	Not Available	567	Open in IMG/M
3300025785\|Ga0208498_1007629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2337	Open in IMG/M
3300025789\|Ga0208499_1046130	Not Available	701	Open in IMG/M
3300027777\|Ga0209829_10081613	Not Available	1612	Open in IMG/M
3300027896\|Ga0209777_10283446	Not Available	1288	Open in IMG/M
3300027896\|Ga0209777_10310963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1214	Open in IMG/M
3300027896\|Ga0209777_10556200	Not Available	837	Open in IMG/M
3300032117\|Ga0316218_1113161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1050	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	100.00%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	90.35%
Lake	Environmental → Aquatic → Freshwater → Lake	9.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	64.04%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	16.67%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	9.65%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	6.14%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.51%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	55.26%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	16.67%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	8.77%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.02%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	6.14%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.63%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.75%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater	0.88%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000162	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002098	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B7 metagenome	Environmental	Open in IMG/M
3300002301	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003796	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09	Environmental	Open in IMG/M
3300003797	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE19Jun07	Environmental	Open in IMG/M
3300003798	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07	Environmental	Open in IMG/M
3300003804	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29May09	Environmental	Open in IMG/M
3300003812	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08	Environmental	Open in IMG/M
3300003814	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Jul09	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300003820	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M
3300004095	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006103	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE29Jun09	Environmental	Open in IMG/M
3300006107	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Oct07	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300006129	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Nov07	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300013285	Freshwater microbial communities from Lower Cathedral Lake, Yosemite National Park, California, USA - 13028-31Y	Environmental	Open in IMG/M
3300013286	Freshwater microbial communities from Elizabeth Lake, Yosemite National Park, California, USA - 13020-23Y	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020695	Freshwater microbial communities from Trout Bog Lake, WI - 15JUL2008 epilimnion	Environmental	Open in IMG/M
3300020707	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020715	Freshwater microbial communities from Trout Bog Lake, WI - 27JUL2009 hypolimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020718	Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 epilimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021133	Freshwater microbial communities from Trout Bog Lake, WI - 09AUG2007 epilimnion	Environmental	Open in IMG/M
3300021137	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025339	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025382	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH22Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025400	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025402	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025403	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025450	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025723	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025778	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025781	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025785	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE12Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09 (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009H_0081832	3300000162	Freshwater	MATYQYNGDGVKEFPTLKLTVKPGDTFDSADEIISADVTLASAPKKTTTQSAAPDTTQGA
TB03JUN2009E_0081643	3300000176	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTTTXSAAPDTTQGA
TB03JUN2009E_0536451	3300000176	Freshwater	MATYQYNGDDVREFPTLGLTVKPGDTFESADEVISADVTLASAPKKTTPVTTPSAS
TB18AUG2009E_0119834	3300000203	Freshwater	MATYQYNGDGVKEFPTLKLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAPSDTTVGE
TB18AUG2009E_0294352	3300000203	Freshwater	MATYIYNGDGEKEFPTLGLTVKNGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQGA*
TBL_comb48_EPIDRAFT_10205503	3300000439	Freshwater	MATYIYNGDGEKEFPTLGLTVKSGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQGA*
TBL_comb48_EPIDRAFT_10693092	3300000439	Freshwater	MATYQYNGDEVKEFPTLKLTVKPGDTFDSADEIISADVTLASAPKKTPTQSAAPDTTQGA
JGI24028J26656_10027112	3300002091	Lentic	MATYIYNGDGEKEFPTLGLTVKNGDTFDSADEIINADVTLASATKKTTPTPAAPSATTQGA*
JGI24028J26656_10094522	3300002091	Lentic	MATYLYDGDEVREFPTLGLTLKSGDTFESKDEVISADVTLASAVKKTTPTPSAPSDSTQGA*
JGI24028J26656_10165581	3300002091	Lentic	MATYQYNGDEVKEFPTLGLTIKPGDTFDSQDEIISADVTLASAPKKTPTPSAAPDT
JGI24028J26656_10192341	3300002091	Lentic	TVKNGDTFESADEIINADVTLASATKKTTPTPAAPSATTQGA*
JGI24218J26658_10153903	3300002092	Lentic	MATYIYNGDGEKEFPTLGLTVKNGDTFDSADEIINADVTLASAPKKTIPTTPVAATTTTQGA*
JGI24218J26658_10266142	3300002092	Lentic	MATYQYNGDEVKEFPTLKITVKPGDTFESADEIISADVTLASTPKKTTPTQSASSDTTQGA*
JGI24219J26650_10076131	3300002098	Lentic	MATYQYNGDEVKEFPTLGLTIKPGDTFDSQDEIISADVTLASAPKKTPTPSAAPDTTQG
JGI24891J29808_10009966	3300002301	Lentic	MATYQYNGDEVREFPTLGLTVKPGDTFDSVDEIISADIALAXAPKKTTPATTPSADADTTQGA*
JGI24891J29808_10168332	3300002301	Lentic	MATYQYNGDEVREFPTLGLTVKPGDTFESADEIVSVDVTLASSTKKTTPPTPSAVDADTTQGA*
JGI24890J29729_10768122	3300002307	Lentic	MATYQYNGSGEKEFPTLGITVKNGDTFESADEIINADVTLASATKKTTPTPAAPSATTQGA*
G310J44882_100711732	3300002933	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAAPDTTQGA
JGI26470J50227_10330232	3300003375	Freshwater	MATYQYNGDEVREFPTLGLTVKPGDTFDSVDEVISADVALASAPKKTTPATTPSAPSDTTQGA*
JGI26470J50227_10620922	3300003375	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTTTQSAAPDTTQGA
JGI26470J50227_10644241	3300003375	Freshwater	AMATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTTTQSAAPDTTQGA*
JGI26470J50227_10782082	3300003375	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAAPDSTVGE
Ga0007850_10001208	3300003783	Freshwater	MATYQYSGDDVREFPTLGLTVKPGDTFDSKDDIISADVSLASAPKKTTTPSAPSDSTVGA
Ga0007835_10043283	3300003789	Freshwater	MATYQYNGDEVREFPTLGLTVKPGDTFESKDDIISADVSLASAPKKITTPSAPSDXTVGA
Ga0007865_10000182	3300003796	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTXDSADEIISADVTLASAPKKTPTPSAAPDTTQGA
Ga0007846_10041682	3300003797	Freshwater	MATYQYNGDDVQEFPTLGLTVKPGDTFESKDEVISANVTLASASKKTTPAPSAAPDTTVGE*
Ga0007842_10026972	3300003798	Freshwater	MATYQYNGDDVREFPTLKLTVKPGDTFESKDEVISADVTLASASKKTTPAPSAAPDTTVGE*
Ga0007842_10133412	3300003798	Freshwater	MATYQYNGDEVREFPTLGLTVKPGDTFESKDDIISADVSLASAPKKTTTPSAPSDS
Ga0007817_10156752	3300003804	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAAPDTTQGA*VSGTTKYT
Ga0007861_10009965	3300003812	Freshwater	YPNDSGIRRTMATYQYNGDEVREFPTLGLTVKPGDTFESKDDIISADVSLASAPKKTTTPSAPSDSTVGA*
Ga0007877_10179252	3300003814	Freshwater	MATYQYNGDEVREFPTLGLTVKPGDTFESKDDIISADVSLASAPKKITTPSAPSDLTVGA
Ga0007856_10067812	3300003815	Freshwater	MATYQYNGDEVREFPTLXLTVKPGDTXESKDDIISADVSLASAPKKITTPSAPSDSTVGA
Ga0007863_10034212	3300003820	Freshwater	MATYQYNGDEVREFPTLGLTVKPGDTFDSADEIISADVSLASASKKITTPSAPSDSTVGA
Ga0007863_10041243	3300003820	Freshwater	IYNGDGEKEFPTLGLTVKSGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQGA*
Ga0007875_10030803	3300003823	Freshwater	MATYQYNGDDVQEXPTLGLTVKPGDTFESKDEVISANVTLASASKKTTPAPSAAPDTTVGE*
Ga0007829_100107072	3300004095	Freshwater	MATYQYNGDCVREFPTLTLTVKPGDTFESKDEVISADVTLASASKKTTSEPSAAPDTTVGE*
Ga0007829_100112651	3300004095	Freshwater	MATYQYTGDEVKEFPTLGITVKPGDTFESADEVISADVTLASAPKKTTPAAPVTPDAPTPSAPSDTTQGA*
Ga0065173_10757312	3300004686	Freshwater	YQYNGDEVKEFPTLKLTVKPGDTFDSADEIISADVTLASAPKKTTTQSAAPDTTQGA*
Ga0065171_10199682	3300004692	Freshwater	MATYQYNGDDVREFPTLGLTVKPGDTFESADEVISADVTLASAPKKTTPVTTPSASSDTTQGA*
Ga0065171_10426611	3300004692	Freshwater	MATYIYNGDGEKEFPTLGLTVKNGDTFDSADEIVNADVTLASAPKKTTP
Ga0007804_10813672	3300004770	Freshwater	SIRCYTNDSGLGRTMATYQYNGDDVREFPTLGLTVKPGDTFESADEVISADVTLASAPKKTTPVTTPSASSDTTQGA*
Ga0007804_11144042	3300004770	Freshwater	MATYQYNGDDVQEFPTLGLTVKPGDTFESKDEVISANVTLASSVKKTTPAPSAAPDTTVGE*
Ga0007854_102224202	3300004806	Freshwater	MATYLYSGDDVREFPTLGLTVKPGDTFDAPDGVIAANVSTASAPKKTTPSSAPSDTTVGA
Ga0007881_10268571	3300006072	Freshwater	MATYQYSGDDVREFPTLGLTVKPGDTFDSKDDIISADVSLASAPKKTTTPSAP
Ga0007813_10053165	3300006103	Freshwater	MATYIYNGSGEKEFPTLGLTVKSGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQGA*
Ga0007836_10707471	3300006107	Freshwater	MATYQYNGDCVREFPTLALTVKPGDTFESKDEVISADVTLASASKKTTSEQSAATDTTVGE*
Ga0007857_10682602	3300006112	Freshwater	MATYQYNGDDVREFPTLGLTVKPGDTFESADEVISADVTLASAPKKSTPVTTPSANADTTQGA*
Ga0007866_10533022	3300006119	Freshwater	MATYQYNGDEMKEFPTLGLTVKPGDTFESKDEIISADVTLASAPKKTPTPSAPSDTTVGE
Ga0007852_11055982	3300006123	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAPSDTTQGA
Ga0007828_10189533	3300006128	Freshwater	MATYQYNGDCVREFPTLALTVKPGDTFESKDEVISADVTLASASKKTTPAPSAATDTTVGE*
Ga0007828_10785661	3300006128	Freshwater	MATYQYNGDEVREFPTLKLTVKPGDTFESKDDIISADVSLASAPKKITTP
Ga0007834_10352281	3300006129	Freshwater	VREFPTLTLTVKPGDTFESKDEVISADVTLASASKKTTPAPSAATDTTVGE*
Ga0007834_10950822	3300006129	Freshwater	MATYQYNGDCVREFPTLTLTVKPGDTFESKDEVISADVTLASASKKTTSEPSAATDTTVGE*
Ga0114951_102032652	3300009502	Freshwater	MATYIYNGDGEKEFPTLGLTVKPGDTFDSADEIVNADVTLASATKKTTPTPAAPSATTQGA*
Ga0114964_1000206411	3300010157	Freshwater Lake	MATYQYNGDEEKVFPTLGVTVKPGDTFDTTDEVISADVTLASAPKKTTPTPSAASDTTQGA*
Ga0136642_100027650	3300013285	Freshwater	MATYQYNGDDVREFPTLKLTVKPGDTFESADEVISANVTLASAVKKTTPAPSAAPDSTVGE*
Ga0136642_10120815	3300013285	Freshwater	MATYLYNGDQVKEFPTLGLTVKPGETFDSADEVISADVTLASAPKKTIPTPSAATDTTQGA*
Ga0136642_10149761	3300013285	Freshwater	MATYQYNGTDAREFPTLALTVQPGDTFESKDEIISADVTLASAPKIKTPAPSAPSDTTVGE*
Ga0136642_10153993	3300013285	Freshwater	MATYQYNGDDVREFPTLKLTVKPGDTFESADEVISANVTLASATKKTTPTPSAAPDTTVGE*
Ga0136642_10178322	3300013285	Freshwater	MATYQYNGDEVREFPTLKLTVKPGDTFESADEIISADVTLAVKKTPAPSAATDTTVGA*
Ga0136641_10044136	3300013286	Freshwater	MATYQYNGTQAREFPTLALTVQPGDTFESKDEIISADVTLASAPKIKTPAPSAPSDTTVGE*
Ga0136641_10230452	3300013286	Freshwater	MATYQYNGDEAREFPTLGLTVKPGDTFESKDEIISADVTLAVKKTPAPSAATDTTVGA*
Ga0214194_1010412	3300020686	Freshwater	MATYQYNGDEVKEFPTLKLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAAPDTTQGA
Ga0214194_1141142	3300020686	Freshwater	MATYQYNGSDEREFPTLGLTVKPGDTFESKDEIISADVTLASAPKKTPTPSAAPDSTVGE
Ga0214190_10022275	3300020695	Freshwater	MATYQYNGDEVKEFPTLKLTVKPGDTFDSADEIISADVTLASAPKKTPTQS
Ga0214238_10075573	3300020707	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTPTQSAAPDTTQGA
Ga0214198_10201952	3300020710	Freshwater	MATYQYTGDEVKEFPTLGITVKPGDTFESADEVISADVTLASAPKKTTPAAPVTPDAPTPSAPSDTTQGA
Ga0214254_10212012	3300020715	Freshwater	MATYQYNGDGVKEFPTLKLTVKPGDTFDSADEIISADVTLASAPKKTPTQSAAPDTTQGA
Ga0214207_10014823	3300020716	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTTTPSAAPDTTQGA
Ga0214207_10022424	3300020716	Freshwater	MATYIYNGDGEKEFPTLGLTVKNGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQG
Ga0214178_10130103	3300020718	Freshwater	MATYQYNGDEVREFPTLGLTVKPGDTFDSVDEVISADVALASAPKKTTPATTPSAPSDTTQGA
Ga0214170_10011222	3300020731	Freshwater	MATYMYNGDGEKEFPTLGITVKNGDTFDSADEIVNADVTLASAVKKTIPTPAAPSATTQG
Ga0214170_10054465	3300020731	Freshwater	MATYIYNGDGEKEFPTLGLTVKSGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQG
Ga0214206_10049901	3300021131	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFESKDEIISADVTLASAPKKTPTPSAPSDTTVGE
Ga0214206_10098252	3300021131	Freshwater	MATYQFNGDCVREFPTLGLTVKPGDTFESKDEVISADVTLASKKTTPAPSAATDTTVGE
Ga0214175_10248832	3300021133	Freshwater	EKEFPTLGLTVKSGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQGA
Ga0214165_10784631	3300021137	Freshwater	MATYQYSGDDVREFPTLGLTVKPGDTFDSKDDIISADVSLASAPKKTTTPSA
Ga0214165_11041421	3300021137	Freshwater	MATYIYNGDGEKEFPTLGLTVKPGDTFDSADEIVNADVTLASATKKTTPTTPVA
Ga0214192_11835371	3300021142	Freshwater	MATYQYNGDGEREFPTLGLTVKPGDTFESADEIISADVTLASAPKKTPTQSAA
Ga0212088_101817903	3300022555	Freshwater Lake Hypolimnion	MATYQYNGDEVKEFPTLGLTIKPGDTFDSQDEIISADVTLASAPKKTPTPSAAPDTTQGA
Ga0208502_10195762	3300025339	Freshwater	YNGDEVREFPTLGLTVKPGDTFESKDDIISADVSLASAPKKTTTPSAPSDSTVGA
Ga0208383_10003327	3300025357	Freshwater	MATYQYNGDDVREFPTLKLTVKPGDTFESKDEVISADVTLASASKKTTPAPSAAPDTTVG
Ga0208383_10133962	3300025357	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAPSDTTVGE
Ga0208504_10071592	3300025358	Freshwater	MATYQYNGDDVREFPTLGLTVKPGDTFESADEVISADVTLASAPKKTTPVTTPSASSDTTQGA
Ga0208504_10137472	3300025358	Freshwater	MATYQYNGDDVQEFPTLGLTVKPGDTFESKDEVISANVTLASSVKKTTPAPSAAPDTTVG
Ga0208504_10302272	3300025358	Freshwater	MATYQYNGDEVREFPTLGLTVKPGDTFESKDDIISADVSLASAPKKITTPSAPSDSTVGA
Ga0207957_10117471	3300025372	Freshwater	YNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTTTQSAAPDTTVGE
Ga0207957_10246242	3300025372	Freshwater	YNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTPTPSAAPDTTQGA
Ga0208738_10218362	3300025379	Freshwater	MATYQYNGDDVQEFPTLGLTVKPGDTFESKDEVISANVTLASASKKTTPAPSAAPDTTVG
Ga0208256_10006325	3300025382	Freshwater	MATYQYNGDEVREFPTLGLTVKPGDTFESKDDIISADVSLASAPKKTTTPSAPSDSTVGA
Ga0208257_10565952	3300025389	Freshwater	MATYQYNGSDEREFPTLGLTVKPGDTFESKDEIISADVTLASAPKKTPTPSAPSDTTVGE
Ga0208387_10172811	3300025400	Freshwater	MATYIYNGDGEKEFPTLGLTVKSGDTFDSADEIVNADVTLASAPKKTTPTTP
Ga0208876_10251281	3300025402	Freshwater	MATYIYNGSGEKDFPTLGLTVKPGDTFDSADEIVNADVTLASATKKTIPTT
Ga0208745_10088533	3300025403	Freshwater	MATYQYSGDDVREFPTLGLTVKPGDTFDSKDDIISADVSLASAPKKITTPSAPSDSTVGA
Ga0208378_10058732	3300025407	Freshwater	MATYQYSGDDVREFPTLGLTVKPGDTFDSKDDIISADVSLASAPKKTTTPSALSDSTVGA
Ga0208875_10774422	3300025410	Freshwater	SGDDVREFPTLGLTVKPGDTFDAPDGVIAANVSTASAPKKTTPSSAPSDTTVGA
Ga0208616_10123331	3300025417	Freshwater	MATYQYNGDCVREFPTLTLTVKPGDTFESKDEVISADVTLASASKKTTPAPSAATDTTVG
Ga0208616_10222532	3300025417	Freshwater	MATYQYNGDEVREFPTLKLTVKPGDTFESKDDIISADVSLASAPKKITTPSAPSDLTVGA
Ga0208616_10518482	3300025417	Freshwater	MATYIYNGDGEKDFPTLGLTVKPGDTFDSADEIVNADVTLASATKKTIPTTPV
Ga0208500_10170261	3300025429	Freshwater	TMATYQYNGDDVREFPTLGLTVKPGDTFESADEVISADVTLASAPKKTTPVTTPSASSDTTQGA
Ga0208744_10195591	3300025450	Freshwater	RSDRNLCRDSIRCYPNDSGIRRTMATYQYNGDDVQEFPTLGLTVKPGDTFESKDEVISANVTLASASKKTTPAPSAAPDTTVGE
Ga0208379_11449981	3300025598	Freshwater	SYGNFCRDSIRCYTNDSGLGRTMATYQYNGDDVREFPTLGLTVKPGDTFESADEVISADVTLASAPKKTTPVTTPSASSDTTQGA
Ga0208741_100353441	3300025723	Freshwater	EKEFPTLGLTVKNGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQGA
Ga0208388_10394601	3300025778	Freshwater	MATYQYNGDEVKEFPTLGLTVKPGDTFDSADEIISADVTLASAPKKTTTQSAA
Ga0208386_10190781	3300025781	Freshwater	EFPTLGLTVKSGDTFDSADEIVNADVTLASAPKKTTPTPVAATTTTQGA
Ga0208386_10305762	3300025781	Freshwater	MATYQYNGDCVREFPTLTLTVKPGDTFESKDEVISADVTLASASKKTTSEPSAATDTTVG
Ga0208386_10496102	3300025781	Freshwater	MATYIYNGDGEKDFPTLGLTVKPGDTFDSADEIVNADVTLASAVKKTTPTPAAPSATTQG
Ga0208498_10076292	3300025785	Freshwater	MATYQYNGDEVREFPTLKLTVKPGDTFESKDDIISADVSLASAPKKITTPSAPSDSTVGA
Ga0208499_10461302	3300025789	Freshwater	MATYIYNGDGEKEFPTLGITVKNGDTFDSADEIVNADVTLASAVKKTTPTPAAPSATTQG
Ga0209829_100816133	3300027777	Freshwater Lake	MATYQYNGDEEKVFPTLGVTVKPGDTFDTTDEVISADVTLASAPKKTTPTPSAASDTTQG
Ga0209777_102834463	3300027896	Freshwater Lake Sediment	MATYQYNGDEVREFPTLGLTVKPGDTFDSVDEIISADIALASAPKKTTPATTPSADADTTQGA
Ga0209777_103109633	3300027896	Freshwater Lake Sediment	MATYQYNGDCVREFPTLTLTVKPGDTFESKDEVISADVTLASASKKTTPAPSAAPDTTVG
Ga0209777_105562002	3300027896	Freshwater Lake Sediment	MATYQYNGDDVREFPTLVLTVKPGDTFDAPDGLIAPDVALASAPKKTTPTPTPSAAPDTTQGA
Ga0316218_11131611	3300032117	Freshwater	DDVREFPTLGLTVKPGDTFESADEVISADVTLASAPKKTTPATTPSAPSDTTQGA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080791

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences