NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080533

Metagenome / Metatranscriptome Family F080533

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080533
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 114 residues
Representative Sequence VFSLIHQVQDLSEPREVDPFLRFQRMLFEERNNPFAEVIEPPDSVRHSIAVILSYYSTTEELLKRVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVETTFAVNESDNPLGL
Number of Associated Samples 103
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 6.14 %
% of genes near scaffold ends (potentially truncated) 50.43 %
% of genes from short scaffolds (< 2000 bps) 99.13 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (98.261 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(17.391 % of family members)
Environment Ontology (ENVO) Unclassified
(33.043 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.609 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.30%    β-sheet: 0.00%    Coil/Unstructured: 61.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.16
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A98.26 %
All OrganismsrootAll Organisms1.74 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004080|Ga0062385_11108148Not Available537Open in IMG/M
3300004119|Ga0058887_1490845Not Available503Open in IMG/M
3300004120|Ga0058901_1547258Not Available594Open in IMG/M
3300004137|Ga0058883_1023223Not Available762Open in IMG/M
3300004281|Ga0066397_10082752Not Available644Open in IMG/M
3300004476|Ga0068966_1443043Not Available588Open in IMG/M
3300004631|Ga0058899_12175166Not Available583Open in IMG/M
3300005165|Ga0066869_10022372Not Available963Open in IMG/M
3300005332|Ga0066388_106880619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Butyrivibrio → unclassified Butyrivibrio → Butyrivibrio sp. Su6572Open in IMG/M
3300005434|Ga0070709_11418145Not Available562Open in IMG/M
3300005537|Ga0070730_10824938Not Available583Open in IMG/M
3300005541|Ga0070733_10767047Not Available647Open in IMG/M
3300006163|Ga0070715_10916338Not Available540Open in IMG/M
3300006804|Ga0079221_11568177Not Available532Open in IMG/M
3300009038|Ga0099829_10766701Not Available801Open in IMG/M
3300009088|Ga0099830_10910224Not Available727Open in IMG/M
3300009089|Ga0099828_11675125Not Available559Open in IMG/M
3300009792|Ga0126374_11525034Not Available549Open in IMG/M
3300010043|Ga0126380_11143965Not Available667Open in IMG/M
3300010043|Ga0126380_12039957Not Available526Open in IMG/M
3300010046|Ga0126384_11228403Not Available692Open in IMG/M
3300010047|Ga0126382_10367641All Organisms → Viruses → Predicted Viral1109Open in IMG/M
3300010048|Ga0126373_11738947Not Available687Open in IMG/M
3300010048|Ga0126373_12127895Not Available623Open in IMG/M
3300010065|Ga0127435_108863Not Available524Open in IMG/M
3300010079|Ga0127436_118892Not Available576Open in IMG/M
3300010098|Ga0127463_1069614Not Available518Open in IMG/M
3300010130|Ga0127493_1067984Not Available545Open in IMG/M
3300010142|Ga0127483_1259680Not Available588Open in IMG/M
3300010320|Ga0134109_10409965Not Available543Open in IMG/M
3300010339|Ga0074046_10579596Not Available665Open in IMG/M
3300010358|Ga0126370_11309945Not Available679Open in IMG/M
3300010360|Ga0126372_12396628Not Available578Open in IMG/M
3300010361|Ga0126378_11711484Not Available715Open in IMG/M
3300010376|Ga0126381_102835689Not Available691Open in IMG/M
3300010855|Ga0126355_1116193Not Available586Open in IMG/M
3300010865|Ga0126346_1444199Not Available612Open in IMG/M
3300011062|Ga0138582_1079398Not Available610Open in IMG/M
3300011120|Ga0150983_10488854Not Available608Open in IMG/M
3300011120|Ga0150983_10822083Not Available624Open in IMG/M
3300011120|Ga0150983_11440828Not Available529Open in IMG/M
3300011120|Ga0150983_13712160Not Available589Open in IMG/M
3300011120|Ga0150983_15042781Not Available617Open in IMG/M
3300011120|Ga0150983_15043632Not Available573Open in IMG/M
3300011120|Ga0150983_15100685Not Available600Open in IMG/M
3300012199|Ga0137383_10742760Not Available717Open in IMG/M
3300012201|Ga0137365_10921375Not Available637Open in IMG/M
3300012205|Ga0137362_10888508Not Available761Open in IMG/M
3300012359|Ga0137385_11113943Not Available649Open in IMG/M
3300012376|Ga0134032_1048245Not Available555Open in IMG/M
3300012385|Ga0134023_1263857Not Available538Open in IMG/M
3300012392|Ga0134043_1083507Not Available590Open in IMG/M
3300012393|Ga0134052_1042620Not Available581Open in IMG/M
3300012395|Ga0134044_1239391Not Available589Open in IMG/M
3300012398|Ga0134051_1256974Not Available556Open in IMG/M
3300012400|Ga0134048_1017490Not Available535Open in IMG/M
3300012948|Ga0126375_11028324Not Available673Open in IMG/M
3300012964|Ga0153916_11565825Not Available734Open in IMG/M
3300012982|Ga0168317_1048100Not Available1078Open in IMG/M
3300014200|Ga0181526_10713366Not Available632Open in IMG/M
3300014495|Ga0182015_10615279Not Available688Open in IMG/M
3300014657|Ga0181522_10606829Not Available664Open in IMG/M
3300016357|Ga0182032_12003384Not Available508Open in IMG/M
3300016387|Ga0182040_11727845Not Available535Open in IMG/M
3300016730|Ga0181515_1402460Not Available620Open in IMG/M
3300017927|Ga0187824_10379949Not Available512Open in IMG/M
3300017993|Ga0187823_10070667Not Available996Open in IMG/M
3300018047|Ga0187859_10616786Not Available612Open in IMG/M
3300018058|Ga0187766_10839327Not Available644Open in IMG/M
3300018062|Ga0187784_11511179Not Available532Open in IMG/M
3300018085|Ga0187772_10687315Not Available733Open in IMG/M
3300018090|Ga0187770_11705527Not Available515Open in IMG/M
3300021420|Ga0210394_11572061Not Available554Open in IMG/M
3300021433|Ga0210391_11221484Not Available581Open in IMG/M
3300022509|Ga0242649_1070032Not Available525Open in IMG/M
3300022530|Ga0242658_1216084Not Available528Open in IMG/M
3300022532|Ga0242655_10257097Not Available555Open in IMG/M
3300022532|Ga0242655_10271647Not Available543Open in IMG/M
3300022721|Ga0242666_1115360Not Available633Open in IMG/M
3300022724|Ga0242665_10289758Not Available570Open in IMG/M
3300022840|Ga0224549_1061917Not Available511Open in IMG/M
3300025905|Ga0207685_10538280Not Available620Open in IMG/M
3300027867|Ga0209167_10619182Not Available593Open in IMG/M
3300028047|Ga0209526_10506309Not Available786Open in IMG/M
3300030595|Ga0210276_10147076Not Available517Open in IMG/M
3300030622|Ga0265391_10317532Not Available523Open in IMG/M
3300030740|Ga0265460_12115969Not Available589Open in IMG/M
3300030743|Ga0265461_13661349Not Available522Open in IMG/M
3300030845|Ga0075397_11139473Not Available718Open in IMG/M
3300030888|Ga0265769_116623Not Available557Open in IMG/M
3300030946|Ga0075379_11458605Not Available648Open in IMG/M
3300030962|Ga0138297_1720827Not Available543Open in IMG/M
3300031017|Ga0265744_106150Not Available672Open in IMG/M
3300031236|Ga0302324_102801981Not Available586Open in IMG/M
3300031446|Ga0170820_13470798Not Available618Open in IMG/M
3300031573|Ga0310915_11213872Not Available521Open in IMG/M
3300031590|Ga0307483_1021768Not Available632Open in IMG/M
3300031871|Ga0316036_112894Not Available582Open in IMG/M
3300031910|Ga0306923_12276031Not Available541Open in IMG/M
3300031946|Ga0310910_11314737Not Available558Open in IMG/M
3300031954|Ga0306926_11239810Not Available874Open in IMG/M
3300031959|Ga0318530_10328086Not Available633Open in IMG/M
3300032027|Ga0247536_106893Not Available525Open in IMG/M
3300032051|Ga0318532_10361812Not Available515Open in IMG/M
3300032160|Ga0311301_11796480Not Available730Open in IMG/M
3300032180|Ga0307471_102992868Not Available599Open in IMG/M
3300032180|Ga0307471_103199721Not Available580Open in IMG/M
3300032783|Ga0335079_11476080Not Available672Open in IMG/M
3300032783|Ga0335079_11811504Not Available593Open in IMG/M
3300032828|Ga0335080_12019380Not Available558Open in IMG/M
3300032828|Ga0335080_12042495Not Available554Open in IMG/M
3300033807|Ga0314866_051211Not Available677Open in IMG/M
3300033829|Ga0334854_121475Not Available629Open in IMG/M
3300034125|Ga0370484_0155604Not Available615Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.39%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil11.30%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.43%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.48%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.48%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.61%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.61%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.74%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.74%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.74%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.74%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.74%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.87%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.87%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.87%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.87%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.87%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.87%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.87%
Weathered Mine TailingsEnvironmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004119Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004120Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004137Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004281Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBioEnvironmentalOpen in IMG/M
3300004476Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005165Soil and rhizosphere microbial communities from Laval, Canada - mgHMCEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010065Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010079Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010098Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010130Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010142Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010855Boreal forest soil eukaryotic communities from Alaska, USA - W1-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011062Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012376Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012385Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012400Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012982Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfieldEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016730Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017927Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4EnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300022509Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022530Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022840Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300030595Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO083SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030622Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030845Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030888Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030946Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030962Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031017Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031590Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031871Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032027Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLE4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033807Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10EnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M
3300034125Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062385_1110814813300004080Bog Forest SoilMDQVQDLAKPREVDSLLRFQRMPFEEGNNPFAEVIEPPNPIRHPVSVIIADHPAAEEFLQSVEQLHVTAMLDDGEFREHLKLAGHLRMGIDADVETSFAVNESDHPLGF*
Ga0058887_149084513300004119Forest SoilDLSEPREVDPLLRFQRMLFEEGNNPFAEVIEPPNSVCHTVVVIGSNHSTAEKFLQRVKQLNIPAMLDNGEFGEHLKLAGHLWMRIDADVETSFAVNESDYPVSF*
Ga0058901_154725823300004120Forest SoilRTFSYTSCVHSRSYSPYFFNAFQVQVFSLMNQVKNLSEPREVDPFLRFQRMLFEERNNPFGEVIQPPNSISHPFTMIRSNYSTAKEFLQRMKQLNIAAMLDDREFREHLKLAGHFWMRMDADVKATLAVDKSNYPLSF*
Ga0058883_102322313300004137Forest SoilVFSLFDEVQDLAKPREVDSFFRFKRMLFEERNDPFVEVIEPPDPVSHAVTVIGSDYSAAEEFLQRVKELNVTAMVHDSEFGEYLELAGHLWVRIDADVETTFAVNKTDDPLGL*
Ga0066397_1008275213300004281Tropical Forest SoilQVQDLSEPREVDPFLRFQRMLFEERNNPFAEVIEPPDSVRHSIAVILSYYSTTEELLERVEELDVTSIANDVEFGEHLKLAGHFWMRMDADVETTFAVNESDNPLGL*
Ga0068966_144304313300004476Peatlands SoilMLSLTNQVEDLSEPREVDSLLRFQRMLLEEGNNPFVEVIQPPDSIGHPIAVIRSNHPASEKLLQGVEQLNIAAVLDNREFGEHLKLAGHLGIRIDADVETTFAVNKPYNPLSF*
Ga0058899_1217516613300004631Forest SoilTFSYTSCVHGRSYGPYFFNALRFQVFSLTHQVKDLSEPREVDSLFRFQPMLFEKGNDPLSEVIQPPDPISHPISVISSHHSAAEKFLQSVEQLNVTVMLNDGEFGEHLKLAGHLGMRVDADEKTTFAVHKPHNPLSI*
Ga0066869_1002237213300005165SoilVLSLIDQVKDLSEPREVDPLLRFKRMLFKEGNNPFAEVIQPPDSVRHSISVILSDYATTEKFLQCVKQSNVTFMLNNGEFGEYLKLAGHLWVRIDADVKTSFAVNKPDNPLGL*
Ga0066388_10688061913300005332Tropical Forest SoilVFSLIHQVQDLSEPREVDPFLRFQRMLFEERNNPFAEVIEPPDSVRHSIAVILSYDSTTEELLERVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVETTFAVNESDNPLGL*
Ga0070709_1141814513300005434Corn, Switchgrass And Miscanthus RhizosphereMFSLIDQVQDLSEPREVDSLLRFKRMLFEEGNNPFGEVIQPPDSVRHSISVILSDDAAAEEFLQCVKQLNVTLMLNNGEFGEDLKLAGHLWVRIDADVETAFAVNESDYPLGL*
Ga0070730_1082493823300005537Surface SoilLQVFSLIDQVKDLSEPREVDPFLRFKRMLFEERNNPFGEVIQPPDSIRHSITVILPDYTASEEFLQCVKQLNVTFMLNDGEFGEYLKLAGHLWVRIDSDVETSFAVNKPDNPLGL*
Ga0070733_1076704713300005541Surface SoilLLRFQRMLFEEGNDPFVEVIQPPNPVCHSIAVISPNHSAPEEFLQGVEQLDIAAMLDNREFGEHLELRGHLWVRIDADVETTFAVNKSDNPLSF*
Ga0070715_1091633813300006163Corn, Switchgrass And Miscanthus RhizosphereMFSLFYQVKDLSEPREVDSLFRFKRMLFEKGNDPFVEVVQPPDSVRHAVTVIGSDYSTAEEFFQCVEKLNVTAMLHNGEFGEYLKLAGHLWMRVDADVETTFAVN
Ga0079221_1156817723300006804Agricultural SoilMFSLTNQVKNLSEPREVDPLLRFQRMLFEEGNDPFAEVIQSPNPVRHTITVIGSNYAAPEEFLQGVEQLNIAAMLNDREFGEHLKLAGHLWVRIDADVKATFSVNKPDNPLSF*
Ga0099829_1076670113300009038Vadose Zone SoilVFSLFHQVQDLAEPREVDSLLRFKRMPFEERNNPFVEVIQPPDSIRHPIPVIVPNHATSEEFLQAVEQLDITSMLDNGEFGEHLKLTGQFRVGINADVKTTFSVDKSDHPLGL*
Ga0099830_1091022413300009088Vadose Zone SoilSYGPNFFNPMRLQVFSLFHQVQDLAEPREVDSLLRFQRMPFEERNNPFVEVIQPPDSIRHPITVIVPNHATSEEFLQAVEKLDITSMLDNGEFGEHLKLTGHFRVGINADVKTTFSVDKSDHPLGL*
Ga0099828_1167512513300009089Vadose Zone SoilPRKVDSLLRFKRMPFEERNNPFIEVIQPPDSIRHPIAVIVPNHATSEEFLQAVEQLDITSMLDNGEFGEHLKLTGHFRVGINADVKTTFSVDKSDHPLGL*
Ga0126374_1152503423300009792Tropical Forest SoilQVFSLIHQVQDLSEPREVDPFLRFQRMLFEERNNPFAEVIEPPDSVRHSIAVILSYDSTTEELLERVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVETTFAVNESDNPLGL*
Ga0126380_1114396513300010043Tropical Forest SoilVFSLIHQVQDLSEPREVDPFLRFERMLFEERNNPFAEVIEPPDSVRHSIAVILSYYSTTEELLERVEELDVTSIANDVEFGEHLKLAGHFWMRMDADVETTFAVNESDNPLGL*
Ga0126380_1203995713300010043Tropical Forest SoilMFSLIDQVQDLSEPREVDPFLRFKRMLFKERNNPFGKVIQPPDSVGHPIAVILSDYSAAEESLQSVEELNVTSMLNDAEFGEHLKLVGHFWMRIDADVETTFA
Ga0126384_1122840313300010046Tropical Forest SoilVFSLIHQVQDLSEPREVDPFLRFQRMLFEERNNPFAEVIEPPDSVRHSIAVILSYYSTTEELLKRVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVETTFAVNESDNPLGL*
Ga0126382_1036764113300010047Tropical Forest SoilVFSLIHQVKDLSEPREVDPFLRFQRMLFEERNNPFSEVIQPPNSIRHSIAVILSNYSASEEFLQSMEKLNVTSMLNDSEFGEHLELAGHFWVLVDADVETTSAVNKTDHPLGL*
Ga0126373_1173894713300010048Tropical Forest SoilVFSLVHQVKNLSEPREVDPLLRFQPMLFEEWNNPFVKVIQPPDSIGHSISVILSHYTATEESLQCVEQLDITAMLNDSEFGEYLILARHFWVRMDADVETTFAVNETNDPLGL*
Ga0126373_1212789513300010048Tropical Forest SoilYFLDAFRFQVFSLFDQVQDLTEPREVDSFFRFKRMLFEERNDPFVEVIQPPDSVSHAVTVIGSDYSATEEFLQSVEELNVTAVLHDCEFGEYLELAGHLWVRIDADVETTFAVNKTDDPLGL*
Ga0127435_10886313300010065Grasslands SoilQVFSLIDQVQNLSEPREVDPLLRFQGMLFEERNNPFVEVIQPPDTIGHAISVILSHYTATEEFLQRVKQLNITSVLNDREFGEHLVLARYFWMWVDADIKTTFAINKPHYPLSL*
Ga0127436_11889213300010079Grasslands SoilVFSLIYQVQNLSEPREVDPLLRFQGMLFEERNNPFVEVIQPPDTIGHAISVILSHYTATEEFLQRVKQLNITSVLNDREFGEHLVLARYFWMWVDADIKTTFAINKPHYPLSL*
Ga0127463_106961413300010098Grasslands SoilSYRPYFFNAFPLQVFSLIDQVKDLSKPREVDSLLRFKRMLFEEGNNPFGEVIQPPDSVRHSISVILSYYSASEKLLQCVQQLNVTFMLNDGEFGEYLKLAGHLWVWIDADVETTFAVNKSDDPLGL*
Ga0127493_106798413300010130Grasslands SoilFNAFRFQVFSLIYQVQNLSEPREVDPLLRFQGMLFEERNNPFVEVIQPPDTIGHAISVILSHYTATEEFLQRVKQLNITSVLNDREFGEHLVLARYFWMWVDADIKTTFAINKPHYPLSL
Ga0127483_125968013300010142Grasslands SoilMFSLFYQVQDLSEPREVDSLLRFKRMLFEEWNDPFVEVIQPPDSVGHAITVIGSDYSTTEEFLQCVEELNVTAMLHDREFGEYLKLAGHLWVRVDADVETAFAVNESHHPLGL*
Ga0134109_1040996513300010320Grasslands SoilVQNLSEPREVDPILRFQGMLFEERNNPFVEVIQPPDTIGHAISVILSHYTATEEFLQRVKQLNITSVLNDREFGEHLVLARYFWMWVDADIKTTFAINKPHYPLSL*
Ga0074046_1057959613300010339Bog Forest SoilSYSSNFFDTLQVQVFSLTNQVKNLAEPREVDSLLRFKRVLFEEGNDPFDEVIQPPNPIRHAITVIDSNHSAPEKFLQGVEQLNIAAMLDDREFGEYLKLAGHLWMRIDADVETTFAVNKSNDPLSF*
Ga0126370_1130994513300010358Tropical Forest SoilVFSLIHQVQNLSEPREVDPLLRFQRMLFEERNNPFVEVIQPPDSVSHSISVILPHYTATEESLQRVEQLDITSMLNDSEFGEHLILARHFWMWVDADVETTFAVNEPYHPLGL*
Ga0126372_1239662813300010360Tropical Forest SoilVFSLIHQVQDLSEPREVDPFLRLERMLFEERNNPFAEVIEPPDSIRHSIAVILSYYSTTEKFLKRVEELNVTSMLNDGEFGEHLELAGHFWVLVDADVETTFAVNKTDHPLGL*
Ga0126378_1171148413300010361Tropical Forest SoilVFSLVHQVQDLSEPREVDPFLRFQRMLFEERNNPFAEVIEPPDSVRHSIAVILSYYSTTEELLERVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVETTFAVNESDNPLGL*
Ga0126381_10283568913300010376Tropical Forest SoilVFFLTHQAQDLSEPREVDPLLRFQRMPFEEGNNPFAEVIQSPNSISHPIAVIGSNHSTTEEFLQRVKQLNIATMLDNSEFGKHLEFRGHFGMRIDADVEATFAVNKSDNPLSA*
Ga0126355_111619313300010855Boreal Forest SoilSFAACVHYRSYLPNFLDAFRFQVFSLFDEVQDLAKPREVDSFFRFKRMLFEERNDPFVEVIQPPDSVSHAVTVNGSDYSAAEEFLQSVKELNVTAVLHDCEFGEYLELAGHLWVRIDADVETTFAVNKTDDPLGL*
Ga0126346_144419913300010865Boreal Forest SoilVFSLSDQVQNLAEPREVDSLLRFKRMLFEEGNDPFVKVIQPPDSIRHSISVISSYYSTAKKLFQRVQQLNVTLMLNNGEFGEYLELAGHLQVRVDADVETTFAVNETHYPVSL*
Ga0138582_107939813300011062Peatlands SoilMLSLTNQVEDLSEPREVDSLLRFQRMLLEEGNNPFVEVIQPPDSIGHPIAVIRSNHPASEKLLQGVEQLNIAAVLDNREFGEHLKLAGHLGMRIDADVKATFSVDKSYNPLSV*
Ga0150983_1048885423300011120Forest SoilMNQVKNLSEPREVDPFLRFQRMLFEERNNPFGEVIQPPNSISHPFTVNRSNYSTAEEFLQRMKQLNIAAMLDDREFREHLKLAGHFWMRMDADVKATLAVDKSNYPLSF*
Ga0150983_1082208313300011120Forest SoilVFSLIDQVKNLSEPGEVDSLLRFERMLFKEGNDPFVEVIQPPDSISHPVTVIRSNHPTAEEFLQCMEELNIAEMLDDREFGEHLKLTRHFWMGIDADVKTAFSVNKSYHPLSV*
Ga0150983_1144082813300011120Forest SoilSLFDEVQDLAKPREVDSFFRFKRMLFEERNDPFVEVIQPPDPVSHAVTVIGSDYSATEEFLQCVKELNVTAVLHDCEFGEYLELAGHLWVRIDADVETTFAVNKTDDPLGL*
Ga0150983_1371216013300011120Forest SoilMPSLTNQVQDLSEPREVDPLLRFQRMLFEKGNNPFAEVIQPPNPVCHSTAVTGSNHSTPEEFLERVEQLDVAAMLDNHEFGEYLKFRGYLWVWMQDDVETTFAVHETNNPLSF*
Ga0150983_1504278113300011120Forest SoilMFSLVHQVQNLSEPREVDPLLGFKRMLFKEGNNPFGEVIQPPDPISHSISVILSHHPTAEISLQRVEQLDITSMLNDREFGEHLKLAGHFWMRIDADVETTFAVNETHHPLSF*
Ga0150983_1504363213300011120Forest SoilSCVHCGSYGPNFFDPLQPQMFSLTHQVQDLAKPREVDPLLRFQRMPFEEGNNPFGEVIQPPDSIRHPISVIGSNHATAEELLQRVKQLNVTAMLNDREFGEHLKLRGHLRVRVDADVETSFAVNKSHDPVGV*
Ga0150983_1510068513300011120Forest SoilMFTLMNQAKDLAEPREIDPLLRFQLMLFEEGNNPFVEVIQPPNSISHPIAVVLSNDSTAEKLLQRVKQLDVTVMLDDREFREHLKLAGQIGMGIDADVETTFAVNKSNHPLSF*
Ga0137383_1074276013300012199Vadose Zone SoilVFSLIDQVKNLSEPREVDPLLRFKRMPFEERNNPFSKVIQPPDSISHSISVIGSHHSATEEFLQRVEQLNVTTMLNDREFGEHLELAGHLWVWIDADVETTFAVNETYYPLSL*
Ga0137365_1092137513300012201Vadose Zone SoilYFFNAFRFQVFSLIYQVQNLSEPREVDPLLRFQGMLFEERNNPFVEVIQPPDTIGHAISVILSHYTATEEFLQRVKQLNITSVLNDREFGEHLVLARYFWMWVDADIKTTFAINKPHYPLSL*
Ga0137362_1088850813300012205Vadose Zone SoilVFSLIDQVKDLSEPREVDSLLRFKRMLFEEGNNPFGEVIQPPDSVRHSISVILSHYAASEKLLQCVQQLNVTFMLNDGEFGEYLKLAGHLWVWIDADVETTFAVNKSDNPLGL*
Ga0137385_1111394313300012359Vadose Zone SoilPLRFQVFSLIDQVKNLSEPREVDPLLRFKRMPFEERNNPFSKVIQPPDSISHSISVIGSHHSATEEFLQRVEQLNVTTMLNDREFGEHLELAGHLWVWIDADVETTFAVNETYYPLSL*
Ga0134032_104824513300012376Grasslands SoilGPYFFNAFRFQVFSLIYQVQNLSEPREVDPLLRFQGMLFEERNNPFVEVIQPPDTIGHAISVILSHYTATEEFLQRVKQLNITSVLNDREFGEHLVLARYFWMWVDADIKTTFAINKPHYPLSL*
Ga0134023_126385713300012385Grasslands SoilAFRFQVFSLIYQVQNLSEPREVDPLLRFQGMLFEERNNPFVEVIQPPDTIGHAISVILSHYTATEEFLQRVKQLNITSVLNDREFGEHLVLARYFWMWVDADIKTTFAINKPHYPLSL*
Ga0134043_108350713300012392Grasslands SoilMFSLFYQVQDLSEPREVDSLLRFKRMLFEEGNNPFGEVIQPPDSVRHSISVILSYYSASEKLLQCVQQLNVTFMLNDGEFGEYLKLAGHLWVRVDADVETAFAVNESHDPLGL*
Ga0134052_104262013300012393Grasslands SoilVFSLIYQVQNLSEPREVDPLLRFQGMLFEERNNPFVEVIQPPDTIGHAISVILSHYTATEEFLQRVKQLNITSVLNDREFGEHLVLARYFWMWVDADIKTTFAINKPHCPLSL*
Ga0134044_123939113300012395Grasslands SoilVFSLIYQVQNLSEPREVDPLLRFKRMPFEERNNPFAEVIQPPDSVSHSISVILSHHSATEKFLQCVKQLNVTMMLNDREFGEHLELAGHLWVWIDADVETTFAVNETYYPLSL*
Ga0134051_125697413300012398Grasslands SoilFFNPLRLQVFSLIDQVKNLSEPREVDPLLRFKRMPFEERNNPFAEVIQPPDSVSHSISVILSHHSATEKFLQCVKQLNVTMMLNDREFGEHLELAGHLWVWIDADVETTFAVNETYYPLSL*
Ga0134048_101749023300012400Grasslands SoilVFSLIDQVKNLSEPREVDPLLRFKRMPFEERNNPFAEVIQPPDSVSHSISVILSHHSATEKFLQCVKQLNVTMMLNDREFGEHLELAGHLWVWIDADVETTFAVNETYYPLSL*
Ga0126375_1102832413300012948Tropical Forest SoilVFSLIHQVQDLSEPREVDSFLRFQRMLFEERNNPFAEVIEPPDSVRHSIAVILSYYSTTEELLERVEELDVTSMLNNGEFGEHLKLAGRFWMRIDADVETTFAVNESDNPLGL*
Ga0153916_1156582513300012964Freshwater WetlandsLSEPREVDPLPRFQRMLFEEGNDPFGEVIQPPNAVGHAVAVILSNHSATEEFLQRVEQLDVPAMLNDREFGEHLKLAGHFWMGIDADVETTFPVNKSDHPLSF*
Ga0168317_104810013300012982Weathered Mine TailingsMFSLIHQVKNLSEPREVDPLFRFKRMLFEEGNNPFGKVIQPPNSVCHSVAVILSDYSTPEESLQSVKQLNVTSVLNDCEFGEHLEVARHFWMRVDADVKTTFT
Ga0181526_1071336613300014200BogMPSLTNQVQDLSEPREVDPLLRFQRMLLEEGNNPFGEVIEPPNAVGHAVAVIGPNYPTAEELLQGVKQLDIPAMLDNGELGEHLKLAGHLGVRIDADVKATFPVDKSNNPL
Ga0182015_1061527913300014495PalsaMPSLIDQGQNLSEPREVDPLLRFQRMLFEEGNDPFDEVIQPPNPVRHPITVIGSNNSAPEEFLQSVEQLNVAAMLDDREFREHLKLAGHLWMWMDADVKATFAVDKSDYPLSF*
Ga0181522_1060682923300014657BogMFSLTNQVKDLSEPREVDSLLRFQRMLFEEGNDPFAEVIQPSNPVGHSIAVIASNHSAPEEFLQGVEQLNIAAMLDYCEFGEHLELRGHLWMRIDADAETTFAVHKPDHPLSF*
Ga0182032_1200338413300016357SoilVFSLIHQVQDLSEPREVDPFLRFQRMLFEERNNPFVEVIEPPDSIRHSLAVILSYYSTTEELLERVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVET
Ga0182040_1172784513300016387SoilLDAFYIQVFSLTHQAQDLSEPREVDPLLRFQRMPFEEGNNPFAEVIQSPNSISHPIAVIGSNDSTTEEFLQRVKQLNIATMLDNSEFGKHLEFRGHLGMRIDADVEATFAVNKSDNPLSA
Ga0181515_140246023300016730PeatlandVFSLTNQVKDLSEPREVDSLLRFQRMLFEERNDPFDEVIQPPNPVCHSITVIGSDHSASEELLQCVEQLNIAAMLDNREFGENLILAGHLGMPVDADVKTTLSVDKSNNPLSL
Ga0187824_1037994913300017927Freshwater SedimentTDQVKDLSEPREVDSLLRFQRMLFEEGNDSFAEVIQPPNSVRHTITVIGSNHSAAEELLQRMEELNITAVLHDGEFGEYLKLAGHLWVRIDADVETTFAVNEPDYPLGL
Ga0187823_1007066713300017993Freshwater SedimentMFSLFDQVQDLAEPREVDSFFRFKRMPFKEGNNPFGEVIQPPDSVSHPISVILSHYSTTEVSLQRVEKLNVTSMLNDREFGEYLKLAGHFWMRIDADVETTFAVYKPDYPLSF
Ga0187859_1061678623300018047PeatlandMPSLTNQVQDLSEPREVDPLLRFQRMLFEEGNNPFGEVIEPPNAVGHAVAVIGPNYPTAEKLLQSVKQLDIPAMLDNGELGEHLKLAGHLGMRIDADVKATFPVDKSNNPLSVELLRMRLNVKSLRVLH
Ga0187766_1083932713300018058Tropical PeatlandMQVLSLTHQVKDPSKPREVDPLLRSKRMLFEEGNNPFVEVIQPPYSIRHPVTVIGSNHPTAKKLLERVEQLNITTVLNDSEFGEHLKPRGHLGMRADADMETTFAVNKPYYPLSV
Ga0187784_1151117913300018062Tropical PeatlandLLRFQRMLFEEGNDPFVEVFQSPNSISHPVSVIRPNYSAPEEFLQGVKQLNIPAMLDNCEFGKHLELRGHLGMWIDADVETTFAVNEPDNPLSF
Ga0187772_1068731513300018085Tropical PeatlandMLFEEGNNPFVEVIQPSNSISHPIAVIRPNDSATEEFLQRMEQLNITTVLDNCEFGEHLEFRGHLEMRIDADVETSFAVNESDNPLSF
Ga0187770_1170552713300018090Tropical PeatlandVFSLFHQVQDLSEPREVDSLLRFQRVLFEEGNNPFIEVIQPPDSIRHPISVIAANHPTAEEFLQAMEQLHIAAMLDDGEFGEYLKLAGHIRVGIDAD
Ga0210394_1157206113300021420SoilDAFQFQMLSLTNQVKDLSEPREVDSLLRFQRMLFEKGNDPFAEVIQPSNPVCHSVAVIGSNHSAPEEFLQGVEQLNIATTLDYREFGEHLELRGHLWMRIDADVETTLAVHKPDNPLSF
Ga0210391_1122148413300021433SoilMQVFSLTNQVKNLSEPREVDPLLRFQRMLFEEGNNPFAEVIQPPNPIGQAISVIRPNHPTAEEFLQRVEQLDIAAMLDNREFGEHLEFRGHLGMRMDSDVETTFAVNKSDNPLSF
Ga0242649_107003213300022509SoilMFSLTNQVKDLSEPREVDSLLRFQRMLFKEGNDPFAEVIQPPNPVCHSIAVIRSNHSAPEEFLQRVEQLNIAAMLDYREFGEHLELRGHLWMGIDSDVETTFAVNKPDHPLSF
Ga0242658_121608413300022530SoilSDFFDAFQFQMFSLTNQVKDLSEPREVDSLLRFQRMLFEEGNDPFAEVIQPSNPVCHSIAVTASDHSAPEEFLQGVEQLNIAAMLDYREFGEHLELRGHLWMRVDADAETTFAVYKPDHPLSF
Ga0242655_1025709713300022532SoilFQVFSLFDEVQDLAKPREVDSFFRFKRMLFEERNDPFVEVIQPPDPVRHAVPVIGSDYPATEELLQCVKELNVTVVLHDCEFGEYLKLAGHLWVRIDADVETTFAVNKTDDPLGL
Ga0242655_1027164723300022532SoilFQVFSLFDEVQDLAKPREVDSFFRFKRMLFEERNDPFVEVIEPPDPVSHAVTVIGSDYSAAEEFLQRVKELNVTAILHDSEFGEYLELAGHLWVRIDADVETTFAVNKTDDPLGL
Ga0242666_111536023300022721SoilVFSLFDEVQDLAKPREVDSFFRFKRMLFEERNDPFVEVIEPPDPVSHAVTVIGSDYSAAEEFLQRVKELNVTAMVHDSEFGEYLELAGHLWVRIDADVETTFAVNKTDDPLGL
Ga0242657_118428013300022722SoilQRSRTFSYESCVHAGSYGSDFFDAFLLQVFSLTNQVKDLSEPREVDSLLRFQRMLFEEGNDPFAEVIQPPNPVCHSLAVIGSNYSAPEEFLQRVEQLNIAAMLDYREFGEHLELRGHLWMGIDSDVETTFAVNKPDHPLSF
Ga0242665_1028975823300022724SoilRTFSYTSCVHSGSYGSDFFDTLPVQVFSLTNQVQDLSEPREVDPLLRFQRMLFEEGNNPFVEVIEPPNAVCHTVVVNRSNHSTAEKFLQRVKQLNIPAMLDNGEFGEHLKLAGHLWMRIDADVETSFAVNESDYPLSL
Ga0224549_106191723300022840SoilMNQVQNLAEPREVDPLLCFKGMLLKEGNNPFGEVIQPPDPVGHAITVISSYHTAAEEFLQSVEDLNVTLMLHDREFGEYLKLTRHFWVGIDADVETTFAVNKT
Ga0207685_1053828013300025905Corn, Switchgrass And Miscanthus RhizosphereMFSLFYQVKDLSEPREVDSLFRFKRMLFEKGNDPFVEVVQPPDSVRHAVTVIGSDYSTAEEFFQCVEKLNVTAMLHNGEFGEYLKLAGHLWMRVDADVETTFAVNKSHHPLGL
Ga0209167_1061918213300027867Surface SoilLLRFQRMLFEEGNDPFVEVIQPPNPVCHSIAVISPNHSAPEEFLQGVEQLDIAAMLDNREFGEHLELRGHLWVRIDADVETTFAVNKSDNPLSF
Ga0209526_1050630923300028047Forest SoilMLSLTNQVKDLSEPREVDPLLRFERMLFEKGNNPFGEVIQPPNPVRHAVAVIGSNHATAEKFLQRMKQLSIPAMLDDGEFGEHLKLAGHLWMRVDADVETSFAVNEPNHPLSF
Ga0210276_1014707613300030595SoilLQVFSLTNQVEDLSEPREVDSLLRFQRMLIEEGNDPFAEVIQPPNPVCHAIAVIGSNHSTSEEFLQCVEQLDIATMLNNLEFGEYLEFRGHLWIGIHADVETTFAVNKPYNPLSF
Ga0265391_1031753213300030622SoilIQVFSLTNQVKNLSEPREVDPLLRFQRMLFEEGNNPFAEVIQPPNPIGHTISMIRPNHPTAEEFLQRVEQLDIAAMLDNREFGEHLELRGHLGMRIDTDVETTFAVNKPDNPLSF
Ga0265460_1211596913300030740SoilVFSLTNQVKNLSEPREVDPLLRFQRMLFEEGNNPFAEVIQPPNPIGHAISVIRPNHPTAEEFLQRVEQLDIAAMLDNREFGEHLHLAGHVWMGVESDVEASFAVHKPDHPLSF
Ga0265461_1366134913300030743SoilFQVQVFSLTNQVKNLSEPREVDSLLRFQRMLFEEGNDPFVEVIQPPNSISHPVTVINSNHSTAEEFLQRVEKLNIAAMLDDREFGEHLKLASHFWMGIDADVKATFSVNKPYHPLSI
Ga0075397_1113947323300030845SoilMNAFRLQMFSLFNQVQDLSEPREVDSLLRFKRMLFEEGNNPFVEVIQPPDSIRHAITVIRSDYSATEKLLQCVKELNVTAMLHDCEFGEYLKLAGHLRVRVDADVETTFAVNESHHPLGL
Ga0265769_11662313300030888SoilYASCVHTCSYGSYFFDTLRIQMFSLTNQVKDLSEPREVDPLLRFQRMLFEEGNDPFDEVIQPPNPVRHPITVIDSNYSAPEEFLQSVEQLNIAAMLDDREFRQHLKAYSHLGMRIDADIKTAFSVDKPYNPMGF
Ga0075379_1145860513300030946SoilMFSLFYQVQDLSEPREVDSLLRFKRMLFEEGNNPFVEVIQPPDSIRHAITVIRSNYSATEKLLQCVKELNVTAMLHDCEFGEYLKLAGHLRVRVDADVETTFAVNESHHPLGL
Ga0138297_172082713300030962SoilSNFFDTLQVQVFSLTNQVKDLAEPREVDSLLRFERMLFEEGNDPFGEVIQPPNSVRHSLAVIGSNHSTTEELLQRVKQLNVPAMLNNSEFGEHLEVAGHLWVTVDADIETTFAVNKPDNPLSF
Ga0265744_10615013300031017SoilRTFSYASCVHTCSYGSYFFDTLRIQMFSLTNQVKDLSEPREVDSLLRFQRMLFEEGNDPFDEVIQPPNPVRHAVTVIDSNDPTSEEFLQSVEQLNIAAMLDDREFREHLEMRGHLWMRIDADVKATFSVDKSDHPLSF
Ga0302324_10280198113300031236PalsaGSYFFDTLRIQMFSLTNQVKDLSEPREVDSLLRFQRMLFEEGNDPFDEVIQPPNPVRHAVTVIDSNDPTSEEFLQSVEQLNIAAMLDDREFREHLEFAGHLWMWIDADVETTFPVDKSNHPLSL
Ga0170820_1347079813300031446Forest SoilMFSLVHQVQNLSEPREVDPLLGFKRMLFKEGNNPFGKVIQPPDPIGHSISVILPHHPTAEISLQRVEQLGITSMLNDREFGEHLKLAGHFWMRIDADVETTFAVNETHHPLSF
Ga0310915_1121387213300031573SoilHQVQDLSEPREVDPFLRFQRMLFEERNNPFVEVIEPPDSIRHSLAVILSYYSTTEELLERVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVETTFAVNESDNPLGL
Ga0307483_102176813300031590Hardwood Forest SoilMDQVQNLSKPPKVDPFLRSQWMLFEERNNPFAEVIQPPDSVSHSISVILPYYSASEEPLQRVEQLNITSMLNDHEFGEYLILAGHVWMRVDADVETAFAVNESDHPLGL
Ga0316036_11289413300031871SoilMLFEEGNDPFAEVIQPPNPVCHTIAVIGSNHSTTEEFLQCVEQLDIATMLNNREFGEHLEFRGHLWMRIHADVETTFAVNKPYNPLSF
Ga0306923_1227603113300031910SoilSYCLNFLDAFYMQVFPLTHQVQDLSEPREVDPLLRFQRMPFEEGNNPFAEVIQSPNSISHPIAVIGSNDSTTEEFLQRVKQLNIATMLDNSEFGKHLEFRGHLGMRIDADVEATFAVNKSDNPLSA
Ga0310910_1131473713300031946SoilSEPREVDPLLRFQRMPFEEGNNPFAEVIQSPNSISHPIAVIGSNDSTTEEFLQRVKQLNIATMLDNSEFGKHLEFRGHLGMRIDADVEATFAVNKSDNPLSA
Ga0306926_1123981023300031954SoilMHQVQNLSEPREVDSLLRFQRMLFEEGNNPLVKVIQPPDSVRHSISVILSHDSTAEEFLQCVEQLHVTLMLNDSEFGEYLILAGHFWVRVDANVEATSSVNKTDYPLGL
Ga0318530_1032808613300031959SoilLVQVLSEPRVVDPFLRFQRMLFEERNNPFVEVIEPPDSIRHSLAVILSYYSTTEELLERVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVETTFAVNESDNPLGL
Ga0247536_10689313300032027SoilCFDAFWLQVFSLTNQVEDLSEPREVDSLLRFQRMLFEEGNDPFAEVIQPPNPVCHTIAVIGSNHSTTEEFLQCVEQLDIATMLNNREFGEHLEFRGHLWMRIHADVETTFAVNKPYNPLS
Ga0318532_1036181213300032051SoilSEPREVDPFLRFQRMLFEERNNPFVEVIEPPDSIRHSLAVILSYYSTTEELLERVEELDVTSMLNNGEFGEHLKLAGHFWMRIDADVETTFAVNESDNPLGL
Ga0311301_1179648013300032160Peatlands SoilMLSLTNQVEDLSEPREVDSLLRFQRMLLEEGNNPFVEVIQPPDSIGHPIAVIRSNHPASEKLLQGVEQLNIAAVLDNREFGEHLKLAGHLGIRIDADVETTFAVNKPYNPLSF
Ga0307471_10299286813300032180Hardwood Forest SoilMDQVQNLSKPPKVDPFLRSQGMLFEERNNPFAEVIQPPDSVSHSISVILPYYSASEEPLQRVEQLNITSMLNDHEFGEYLILAGHVWVRVDAD
Ga0307471_10319972113300032180Hardwood Forest SoilPYFVNAFRFQMFSLFYQVKDLSEPREVDSLFRFKRMLFEKWNDPFVEVVQPPDSVRHAVTVIGSDYSTAEEFFQCVEKLNVTAMLHNGEFGEYLKLAGHLWMRVDADVETTFAVNKSHHPLGL
Ga0335079_1147608013300032783SoilMFSLTHQVQDLSEPREVDSLLRFQRMLFEEGNDPFVEVIQPPNTVGHSIAVIRSNHSATEELLQRVEQLNVATMLDNCEFGEHLEPGGHLGMRIDADVETTFAVNESDNPLSF
Ga0335079_1181150413300032783SoilRFQRMLFEEGNDPFVEVIQSPNSVCHPIAVIGSNHSTTEESLQRVEQLNIATMLDNCEFREHLELGGHLGMRIDADVEKAFAVNEPNNPLGF
Ga0335080_1201938013300032828SoilMFSLTHQVQDLSEPREVDSLLRFQRMLFEEGNDPFVEVIQPPNTVGHSIAVIRSNHSAAEEFLQRVEQLNIATMLDNCEFGEHLELRGHLWMRVDADVKTTFAVNKSDN
Ga0335080_1204249513300032828SoilMFSLTNQVKDLSEPREVDSLFRFQRMLFEEGNDPFAEVIQPSNPVCHSIAVIRSNHSAPEELLQRVEQLNIAAMLDNREFGEHLELRGHLWMGIDANVETTFAVNKSDNPLSF
Ga0314866_051211_322_6633300033807PeatlandVFSLFHQVQDLSKPPEVDSLLRFQPMLFKEGNDPFVEVIQPPNPVRHAISMIDSHHSASEKLLQRVEQLNITAVLHDRKFREHLKLAGHLWVRVDADVKTSLAVNKSNHPLGI
Ga0334854_121475_122_4843300033829SoilLNALQLQVFSLMNQVQNLAEPREVDPLLCFKGMLLKEGNNPFGEVIQPPDPVGHAITVISSYHTAAEEFLQSVEDLNVTLMLHDREFGEYLKLTRHFWVGIDADVETTFAVNKTDDPLGL
Ga0370484_0155604_74_4153300034125Untreated Peat SoilVFFLTNQVKNLAEPREVDSLLRFQRMLFEEGNDPFDEVIQPPNPVRHSITVIGSNHPTAEELLQRVKQLNIPAMLDDREFGEYLKLAGHLWMRIDADVETTFAVNKSHDPLSF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.