Metagenome Family F080471

Basic Information
Family ID	F080471
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	66 residues
Representative Sequence	YNVFNEVQFTNMNASFTFTGPNNSQNSNANTGKYVASGDGLAAGTIAPRTMGLTVRFDW
Number of Associated Samples	100
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.06 %
% of genes near scaffold ends (potentially truncated)	83.48 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Most Common Taxonomy
Group	Bacteria (54.783 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (13.043 % of family members)
Environment Ontology (ENVO)	Unclassified (28.696 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.957 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01019	G_glu_transpept	10.43
PF13517	FG-GAP_3	6.09
PF13801	Metal_resist	5.22
PF13570	PQQ_3	2.61
PF14559	TPR_19	2.61
PF13428	TPR_14	1.74
PF06792	UPF0261	0.87
PF00754	F5_F8_type_C	0.87
PF13414	TPR_11	0.87
PF13620	CarboxypepD_reg	0.87
PF13546	DDE_5	0.87
PF01609	DDE_Tnp_1	0.87
PF13432	TPR_16	0.87
PF00884	Sulfatase	0.87
PF00593	TonB_dep_Rec	0.87
PF13181	TPR_8	0.87
PF07859	Abhydrolase_3	0.87
PF01839	FG-GAP	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	10.43
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.87
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.87
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.87
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.87
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.87
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.87
COG5441	ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family	Defense mechanisms [V]	0.87
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.87

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.78 %
Unclassified	root	N/A	45.22 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.78 %
Unclassified	root	N/A	45.22 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.78 %
Unclassified	root	N/A	45.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.87 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.87 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.87 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.22 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.87 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0594153	Not Available	917	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11026778	Not Available	860	Open in IMG/M
3300000787\|JGI11643J11755_11240661	Not Available	558	Open in IMG/M
3300000956\|JGI10216J12902_102378722	Not Available	1200	Open in IMG/M
3300000956\|JGI10216J12902_110519200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300002908\|JGI25382J43887_10506919	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300003324\|soilH2_10326400	Not Available	1395	Open in IMG/M
3300004114\|Ga0062593_100517985	Not Available	1111	Open in IMG/M
3300005093\|Ga0062594_101867955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300005093\|Ga0062594_102638309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005172\|Ga0066683_10283653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300005180\|Ga0066685_10253224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300005187\|Ga0066675_11112337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300005187\|Ga0066675_11385512	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300005294\|Ga0065705_10322625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300005332\|Ga0066388_101592869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300005340\|Ga0070689_101745690	Not Available	567	Open in IMG/M
3300005343\|Ga0070687_100304477	Not Available	1012	Open in IMG/M
3300005367\|Ga0070667_102064616	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300005455\|Ga0070663_100955230	Not Available	743	Open in IMG/M
3300005457\|Ga0070662_101402652	Not Available	602	Open in IMG/M
3300005507\|Ga0074259_10464429	Not Available	533	Open in IMG/M
3300005546\|Ga0070696_100192817	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300005549\|Ga0070704_100841854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300005556\|Ga0066707_10219711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1232	Open in IMG/M
3300005598\|Ga0066706_10252946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1372	Open in IMG/M
3300005713\|Ga0066905_101338316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300005764\|Ga0066903_107636379	Not Available	557	Open in IMG/M
3300005842\|Ga0068858_102373689	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005937\|Ga0081455_10532749	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300006049\|Ga0075417_10380917	Not Available	695	Open in IMG/M
3300006051\|Ga0075364_10659837	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300006169\|Ga0082029_1524148	All Organisms → cellular organisms → Bacteria → Acidobacteria	1147	Open in IMG/M
3300006169\|Ga0082029_1524793	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300006796\|Ga0066665_10430916	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300006845\|Ga0075421_101947240	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300006871\|Ga0075434_100056911	All Organisms → cellular organisms → Bacteria	3886	Open in IMG/M
3300006871\|Ga0075434_101025132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	839	Open in IMG/M
3300006871\|Ga0075434_101862557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300006894\|Ga0079215_10494225	Not Available	760	Open in IMG/M
3300006904\|Ga0075424_100415706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1435	Open in IMG/M
3300006969\|Ga0075419_10138878	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1583	Open in IMG/M
3300007004\|Ga0079218_12345007	Not Available	625	Open in IMG/M
3300007076\|Ga0075435_100630989	Not Available	930	Open in IMG/M
3300009012\|Ga0066710_100459142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1911	Open in IMG/M
3300009012\|Ga0066710_100708056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1536	Open in IMG/M
3300009012\|Ga0066710_101706662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300009012\|Ga0066710_103868589	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300009094\|Ga0111539_13536830	Not Available	501	Open in IMG/M
3300009098\|Ga0105245_10887524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300009162\|Ga0075423_12358205	Not Available	579	Open in IMG/M
3300010323\|Ga0134086_10263324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300010373\|Ga0134128_10850252	Not Available	1011	Open in IMG/M
3300010400\|Ga0134122_12702514	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012189\|Ga0137388_11407917	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300012201\|Ga0137365_10538828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300012206\|Ga0137380_11237793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012469\|Ga0150984_100359391	Not Available	712	Open in IMG/M
3300012685\|Ga0137397_10563089	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300012944\|Ga0137410_11560758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300012948\|Ga0126375_11923972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012960\|Ga0164301_10291622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300012985\|Ga0164308_10610505	Not Available	929	Open in IMG/M
3300012989\|Ga0164305_11704088	Not Available	566	Open in IMG/M
3300013296\|Ga0157374_10772306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300013297\|Ga0157378_13255831	Not Available	505	Open in IMG/M
3300013308\|Ga0157375_13240576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300014325\|Ga0163163_10300823	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300015245\|Ga0137409_11101974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300015373\|Ga0132257_104138858	Not Available	528	Open in IMG/M
3300015374\|Ga0132255_102234068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300015374\|Ga0132255_102353760	Not Available	813	Open in IMG/M
3300018027\|Ga0184605_10249440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300018075\|Ga0184632_10007976	All Organisms → cellular organisms → Bacteria	4416	Open in IMG/M
3300018476\|Ga0190274_13079408	Not Available	560	Open in IMG/M
3300022898\|Ga0247745_1077587	Not Available	553	Open in IMG/M
3300024055\|Ga0247794_10340013	Not Available	512	Open in IMG/M
3300025901\|Ga0207688_10635495	Not Available	674	Open in IMG/M
3300025933\|Ga0207706_11374315	Not Available	581	Open in IMG/M
3300025945\|Ga0207679_10749570	Not Available	888	Open in IMG/M
3300026067\|Ga0207678_11022370	Not Available	731	Open in IMG/M
3300026306\|Ga0209468_1070459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300026327\|Ga0209266_1158851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300026540\|Ga0209376_1230464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300027873\|Ga0209814_10087841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300027873\|Ga0209814_10285098	Not Available	718	Open in IMG/M
3300031824\|Ga0307413_10318049	All Organisms → cellular organisms → Bacteria → Acidobacteria	1188	Open in IMG/M
3300031847\|Ga0310907_10319060	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300031847\|Ga0310907_10475687	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031852\|Ga0307410_10903136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300031901\|Ga0307406_10417102	All Organisms → cellular organisms → Bacteria → Acidobacteria	1068	Open in IMG/M
3300031901\|Ga0307406_11546467	Not Available	585	Open in IMG/M
3300031908\|Ga0310900_10867520	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031938\|Ga0308175_100553961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300031995\|Ga0307409_101102103	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300032013\|Ga0310906_10788032	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300034690\|Ga0364923_0094143	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.35%
Host-Associated	Host-Associated	35.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.74%
Plants	Host-Associated → Plants	35.65%
Aquatic	Environmental → Aquatic	2.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.70%
Sediment	Environmental → Aquatic → Sediment	2.61%
Roots	Host-Associated → Plants → Roots	1.74%
Floodplain	Environmental → Terrestrial → Floodplain	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.13%
Loam	Environmental → Terrestrial → Soil → Loam	9.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.87%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.09%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.87%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.87%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.87%
Switchgrass Rhizosphere Bulk Soil	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere Bulk Soil	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005280	Switchgrass rhizosphere microbial community from Michigan, USA - East Lansing bulk soil	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_05941531	3300000033	Soil	EVQFTNMNTTFQFTGANXXTXRNVDLGKYTATGNGLAAGTIAPRTMGLTVRFDW*
ICChiseqgaiiFebDRAFT_110267781	3300000363	Soil	EVQFTNMNTTFQFTGANNATQRNVDLGKYTATGNGLAAGTIAPRTMGLTVRFDW*
JGI11643J11755_112406611	3300000787	Soil	QFTNMNTTFQFTGANNATQRNVDLGKYTATGNGLAAGTIAPRTMGLTVRFDW*
JGI10216J12902_1023787221	3300000956	Soil	KLQVQAFNVFNEVQFTNMNANFTFTGPNNATNNNANTGKYTATGDGLAAGTIAPRTMGITVRFDW*
JGI10216J12902_1105192001	3300000956	Soil	KLQFQAYNVFNEVQFTTLNADFTFTGPNNSVINSADTGKYVATGGSNLAAGTIPPRTLGLTARIDW*
JGI25382J43887_105069191	3300002908	Grasslands Soil	ARKNSGVKLQFQAYNVFNEVQFTNLNAAFTFAGPDNSTINSANTGKYVATGSGLAAGTIQPRTMGLTVRLDW*
soilH2_103264003	3300003324	Sugarcane Root And Bulk Soil	FNEVQFTNMNASYSFTGPNNSVNSNANTGKYVASGDGLAAGTIAPRTMGITVRFDW*
Ga0062593_1005179853	3300004114	Soil	FQAFNVFNEVQFTNMNASFTFTGPNNSQNSNANTGKYVASGDGLAAGTIAPRTMGLTVRFDW*
Ga0062590_1008021942	3300004157	Soil	RFPVNLMGRKNSGVKLQLQAYNVFNEVQFTNMNASYTFTGTNNATNNSANTGKYVQGNTSDGLAAGTIAPRTMGITVRFDW*
Ga0062592_1006839152	3300004480	Soil	TLARRFPVNLMGRKNSGIKLQVQAFNVFNEVQFTNMNASYTFTGANNSQNSSANTGKYTATGNGLAAGTIAPRTMGITVRFDW*
Ga0062594_1018679552	3300005093	Soil	RLRYEVYNVFNEVQFTNLNAAFTFTGPNNSQNNNANTGKYTATGTTLAAGTITPRVMALTVRFDW*
Ga0062594_1026383092	3300005093	Soil	LMGRKNSGVKLQLQAYNVFNEVQFTNMNASYTFTGTNNATNNSANTGKYVQGNTSDGLAAGTIAPRTMGITVRFDW*
Ga0066683_102836531	3300005172	Soil	FAGRRNSGIKLQFQAYNVFNEVQFTTLNAAFTFSGPNNSVINSANTGKYTSSGGSNLAAGTIQPRTLGLTARIDW*
Ga0066685_102532242	3300005180	Soil	LNATYAFTGANNSVNNNANTGKYTAAGGSNLAAGTIQPRTMGLTVRLDW*
Ga0066675_111123372	3300005187	Soil	NVFNEVQFTTLNATFNFTGPNNSINNNADTGKYVASGGSNLAAGTIQPRTLGLTVRLDW*
Ga0066675_113855122	3300005187	Soil	QLQAYNVFNEVQFTTLNATYAFTGANNSVNNNANTGKYTAAGGSNLAAGTIQPRTMGLTVRLDW*
Ga0065696_13542211	3300005280	Switchgrass Rhizosphere Bulk Soil	AFTFTGPNNSQINSANTGKYVATGTGLAAGTIAPRVLGLTARVDW*
Ga0065705_103226252	3300005294	Switchgrass Rhizosphere	SGVKLQLQAYNVFNEVQFTQMNASYNFTGTNNATNNSANTGKYVQGNTADGLAAGTIAPRTMGITVRFDW*
Ga0066388_1015928691	3300005332	Tropical Forest Soil	VSRRFAVGARKNTGLKLQLQAYNLFNEVQFTTLNATYNFTGPNNSINNNANTGKYVATGGSNLAAGTIQPRTLG
Ga0070689_1017456902	3300005340	Switchgrass Rhizosphere	FNEVQFTNMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW*
Ga0070687_1003044773	3300005343	Switchgrass Rhizosphere	NMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW*
Ga0070667_1020646161	3300005367	Switchgrass Rhizosphere	FKVQVQAYNVFNETQFTNLNATYTFTGTGNVQNTNTNTGKYTQTGSGLSAGTIQPRVIGLTGRFDW*
Ga0070701_103236373	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	NASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW*
Ga0070663_1009552302	3300005455	Corn Rhizosphere	QAYNIFNEVQFTNMNASYTFTGTNNATNNSANTGKYVQGNTSDGLAAGTIAPRTMGITVRFDW*
Ga0070662_1014026521	3300005457	Corn Rhizosphere	FNVFNEVQFTNMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW*
Ga0074259_104644292	3300005507	Arabidopsis Rhizosphere	VQFTNLNAAYTFTGPNNSQINSANTGKYTATGTTLAAGTITPRVQALTVRLDW*
Ga0070686_1004409802	3300005544	Switchgrass Rhizosphere	LSRRFPVTFAGRKNSGVKLQLQAFNVFNEVQFTNMNATFQFTGADNKGQRNVDLGKYTATGNGLAAGTIAPRIMSLTLRFDW*
Ga0070696_1001928171	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	YNVFNEVQFTNMNASFTFTGPNNSQNSNANTGKYVASGDGLAAGTIAPRTMGLTVRFDW*
Ga0070704_1008418541	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	NIFNEVQFTTLNATYTFTGPNNTVNTNGSTGKYVATGGSNLAAGTIQPRTMGLTVRFDW*
Ga0066707_102197112	3300005556	Soil	RFPITFAGRRNSGIKLQFQAYNVFNEVQFTTLNAAFTFTGANNSVINSANTGKYTSAGGSNLAAGTIQPRTLGLTARIDW*
Ga0066706_102529461	3300005598	Soil	VGARKNAGVKLQLQAYNVFNEVQFTTLNATYTFTGPNNSINNNANTGKYVATGGSNLAAGTIQPRTLGLTVRFDW*
Ga0070702_1017413401	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RRFPVNLMGRKNSGVKLQFQAYNIFNEVQFTNMNASYTFTGTNNATNTNANTGKYVATGDGLAAGTIAPRTIGITARFDW*
Ga0066905_1013383162	3300005713	Tropical Forest Soil	YNVFNEVQFTTLNAAFSFTGANNSINNNADTGKYVASGGSNLAAGTIQPRTLGLTVRFDW
Ga0066903_1076363791	3300005764	Tropical Forest Soil	NEVQFTNMNASYTFTGPNNSQNTNANTGKYVPDTSGGLAQGTIAPRIMSLTVRFDW*
Ga0068858_1023736891	3300005842	Switchgrass Rhizosphere	YNVFNEVQFTNLNATYTFTGTGNVQNTNTNTGKYTQTGNGLAAGTIQPRVIGLTARFDW*
Ga0081455_105327491	3300005937	Tabebuia Heterophylla Rhizosphere	INLAGRRNSGVKFQLQAYNVFNEVQFTNMNASFTFTGPNNSVNTNANTGKYVATGTGLAAGTIAPRVLGMTVRLDW*
Ga0075417_103809171	3300006049	Populus Rhizosphere	NVFNEVQFTNMNTTFQFTGANNATQRNVDLGKYTATGNGLAAGTIAPRTMGLTVRFDW*
Ga0075364_106598371	3300006051	Populus Endosphere	LQAYNLFNEVQFTNMNAAFTFTGTNNSVLNSTNTGRYTATGDGLAAGTIAPRVIALSIRADF*
Ga0082029_15241482	3300006169	Termite Nest	PINLMGRKNSGVRLRWEIYNVFNEVQFTNLNAAFTFTGPNNSQINSANTGKYTATGTTLAAGTITPRVQALTVHLDW*
Ga0082029_15247931	3300006169	Termite Nest	PINLMGRKNSGVRLRWEIYNVFNEVQFTNMNASFTFTGPNNSVNNNANTGKYTASGTTLAAGTITPRVMALTLKFDW*
Ga0066665_104309163	3300006796	Soil	TFAGRRNSGIKLQFQAYNVFNEVQFTTLNAAFTFTGANNSVINSANTGKYTSAGGSNLAAGTIQPRTLGLTARIDW*
Ga0075421_1019472402	3300006845	Populus Rhizosphere	RNSGIKFQLQAYNVFNEVQFTNMNASFTFTGPNNSVINSANTGKYVATGTGVAAGTIAPRILGMTVRLDW*
Ga0075434_1000569111	3300006871	Populus Rhizosphere	AVGARKNSGIKLQLQAYNVFNEVQFTTLNAQYMFTGPNNSINTNADTGKYTRSQGSNLAAGTIQPRTLGLTVRFDW*
Ga0075434_1010251321	3300006871	Populus Rhizosphere	NMDASFTFTGPNNSQNSNANTGKYTPTGVGLAAGTIAPRTMGVTARFDW*
Ga0075434_1018625572	3300006871	Populus Rhizosphere	NEVQFTTLNAAFTFTGPNNSINTNTNTGKYVATGGSNLAAGTITPRVIGLTVRLDW*
Ga0079215_104942252	3300006894	Agricultural Soil	ISLMGRKTSGVRLRYEIYNVFNEVQFTNLNASFTFTTPAGQPLNSVNNNANTGKYTATGSTLAAGTITPRVMALTVRLDW*
Ga0075424_1004157061	3300006904	Populus Rhizosphere	KLQFQAFNVFNEVQFTNMDASFTFTGPNNSQNSNANTGKYTATGVGLAAGTIAPRTMGVTARFDW*
Ga0075424_1009639441	3300006904	Populus Rhizosphere	EWDVTVSRRFAVGARRNAGVKLQIQAYNVFNEVQFTTLNATYNFTGPNNSINNNANTGKYVATGGSNLAAGTIQPRTLGLTIRFDW*
Ga0075419_101388782	3300006969	Populus Rhizosphere	RLRWEIYNVFNEVQFTNLNASYTFTGPNNSQINSANTGKYTATGTTLAAGTITPRVMALTLKFDW*
Ga0079218_123450072	3300007004	Agricultural Soil	GRKTSGIRLRYEVYNVFNEVQFTNLNASFTFTTPAGQPLNSSNTNANTGKYTASGSTLAAGTITPRVMALTVRLDW*
Ga0075435_1006309892	3300007076	Populus Rhizosphere	ASYTFTGTNNATNTNANTGKYVATGDGLAAGTIAPRTIGITARFDW*
Ga0066710_1004591421	3300009012	Grasslands Soil	LNAAFTFSGPNNSVINSANTGKYTSSGGSNLAAGTIQPRTLGLTARIDW
Ga0066710_1007080561	3300009012	Grasslands Soil	NVFNEVQFTTLNATYTFTGPNNSVNNNANTGKYVASAGGVTAPLAAGTITPRVLGLTVRLDW
Ga0066710_1017066621	3300009012	Grasslands Soil	FTTLNAAFTFSGPNNSVINSANTGKYTSSGGSNLAAGTIQPRTLGLTARIDW
Ga0066710_1038685891	3300009012	Grasslands Soil	SGIKLQLQAYNVFNEVQFTNLNAAFTFTGPNNSVINSANTGEYTATGTGLAAGTIQPRTMGLTVRLDW
Ga0111539_135368301	3300009094	Populus Rhizosphere	LFNEVQFTNLNASFTYTTPAGAPLNSSNTNANTGKYTANGTTLAAGTITPRVQSLTVRFDW*
Ga0105245_108875241	3300009098	Miscanthus Rhizosphere	NLMGRKNSGLKLQFQAFNVFNEVQFTNMGSTFSFTGPNNSVNNNANTGKYVATGDGLAAGTIAPRTMGLTVRFDW*
Ga0075423_123582052	3300009162	Populus Rhizosphere	NEVQFTNMNASYTFTGTNNATNTNANTGKYVATGDGLAAGTIAPRTIGITARFDW*
Ga0134086_102633241	3300010323	Grasslands Soil	RRFPITLAGRKNSGIKLQLQAYNVFNEVQFTNLNAAFTFTGPNNSVINSANTGKYTATGTGLAAGTIQPRTMGLTVRLDW*
Ga0134128_108502521	3300010373	Terrestrial Soil	LQFQAFNVFNEVQFTNMNASFTFTGPNNSQNSNANTGKYVASGDGLAAGTIAPRTMGLTVRFDW*
Ga0134122_127025142	3300010400	Terrestrial Soil	TTLNAAFTFTGPNNSVNTNANTGKYTASGGSNLAAGTIQPRTMGLTLRLDW*
Ga0137455_10684291	3300011429	Soil	SWDITLSRRFPFTLAGRANSGIKFQLQAYNVFNEVQFTNLNAAFTFTGPNNSVINSANTGKYTATGSGVAAGTIAPRILGMTVRLDW*
Ga0120191_100338912	3300012022	Terrestrial	DITLSRRFPITLAGRRNSGIKFQLQAYNVFNEVQFTNMNASFTFTGPNNSVINSANTGKYTATGTGVAAGTIAPRILGMTVRLDW*
Ga0137388_114079171	3300012189	Vadose Zone Soil	SGIKLQFQAYNVFNEVQFTNLNAAFTFAGPNNSVINSANTGKYTATGTGLAAGTIQPRTMGLTVRLDW*
Ga0137365_105388282	3300012201	Vadose Zone Soil	FPITFAGRRNSGIKLQFQAYNVFNEVQFTTLNAAFTFTGPNNSVINSANTGKYTSAGGSNLAAGTIQPRTLGLTARIDW*
Ga0137380_112377931	3300012206	Vadose Zone Soil	GRRNSGIKLQFQAYNVFNEVQFTTLNAAFTFSGPNNSVINSANTGKYTSSGGSNLAAGTIQPRPLGLTARIDW*
Ga0150985_1202497321	3300012212	Avena Fatua Rhizosphere	RRFPVTFAGRKNSGVKLQLQAFNVFNEVQFTNMNASFTFTGANNSVNSNANTGKYTATGDGLAAGTIAPRIMSLTVRFDW*
Ga0150984_1003593912	3300012469	Avena Fatua Rhizosphere	KNSGVKLQLQAFNVFNEVQFTNMNASFTFTGTNNSVNSNANTGKYTATGDGLAAGTIAPRIMSLTVRFDW*
Ga0137373_100684794	3300012532	Vadose Zone Soil	IMNATYNFTGPNNSQNSNANIGKYVAGGDGLAAGTIAPRTMGITARFDW*
Ga0137397_105630892	3300012685	Vadose Zone Soil	QLQAYNVFNEVQFTTLNAAFMFTGPNNSVNTNANTGKYTAAGGSNLAAGTIQPRTMGLTVRLDW*
Ga0137410_115607581	3300012944	Vadose Zone Soil	QLQAYNVFNEVQFTTLNATYTFTGPNNSVNNNANTGKYVASAGGATAPLAAGTITPRVLGLTVRLDW*
Ga0126375_119239721	3300012948	Tropical Forest Soil	FPVNLMGRKSSGVKLQFQAFNVFNEVQFTNMNASYTFTGANNSTNSNVNTGKYVASGDGLAAGTIAPRILSLTVRFDW*
Ga0164301_102916221	3300012960	Soil	NVMGRKNSGVKLQFQAYNIFNEVQFTNMNAAYSFTNGVNTSANTGKYVATGDGLAAGTIAPRTMGLTVRFDW*
Ga0164308_106105051	3300012985	Soil	NSGVKLQLQAFNVFNEVQFTNMNASFTFTGTNNSVNNNANTGKYVPDTSGGLAQGTIAPRIMSLTVRFDW*
Ga0164308_118208661	3300012985	Soil	FTNLNAAYTFTGANNSQNSNTTTGKYVQTGSNLAAGTIQPRVIGLTARFDW*
Ga0164305_117040882	3300012989	Soil	QAFNVFNEVQFTNMNASFTFTGANNSQNSNANTGKYVASGDGLAAGTIAPRTMALTVRFDW*
Ga0157374_107723062	3300013296	Miscanthus Rhizosphere	NLMGRKNSGVKLQFQAYNIFNEVQFTNMNASYTFTGANNATNSNANTGKYVATGDGLAAGTIAPRTMGLTVRFDW*
Ga0157378_132558312	3300013297	Miscanthus Rhizosphere	FTNMNASFTFTGPNNSQNSNANTGKYVASGDGLAAGTIAPRTMGLTVRFDW*
Ga0157375_132405761	3300013308	Miscanthus Rhizosphere	GRKNSGVKLQFQAYNIFNEVQFTNMNASYTFTGANNATNSNANTGKYVASGDGLAAGTIAPRTMGLTVRFDW*
Ga0163163_103008231	3300014325	Switchgrass Rhizosphere	MNASYTFTGANNATNSNANTGKYVASGDGLAAGTIAPRTMGLTVRFDW*
Ga0137409_111019742	3300015245	Vadose Zone Soil	SRRFPITFAGRKSSGIRLQLQAYNVFNEVQFTTLNATYTFTGPNNSVNNNANTGKYVASAGGATAPLAAGTITPRVLGLTVRLDW*
Ga0132257_1041388582	3300015373	Arabidopsis Rhizosphere	VKLQLQAFNVFNEVQFTNMNATYNFTGANNSVNNNANTGKYTASGTGLAAGTIAPRIMSLTVRFDW*
Ga0132255_1022340682	3300015374	Arabidopsis Rhizosphere	LRVQLQAYNIFNEVQFTTLNATYTFTGPNNTINTNGSTGKYVATGGSNLAAGTIQPRTMGLTVRFDW*
Ga0132255_1023537601	3300015374	Arabidopsis Rhizosphere	AFNVFNEVQFTNMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW
Ga0163161_108740502	3300017792	Switchgrass Rhizosphere	IARRFPVNLMGRKNSGLKLQFQAFNVFNEVQFTNMGSTFSFTGPNNSVNNNANTGKYVATGDGLAAGTIAPRTMGLTVRFDW
Ga0184605_102494402	3300018027	Groundwater Sediment	KLQFQAYNVFNEVQFTNMNTSFTFTGPNNSVINSANTGKYVASGSGLGAGTIPPRTLGLTARFDW
Ga0184632_100079761	3300018075	Groundwater Sediment	KVQFTNMNAAFTFTGANNATNSSANTGKYVATGSGLAAGTIAPRTMGITVRFDW
Ga0190268_123465601	3300018466	Soil	DLTLSRRFPINLLGRKSSGVRLRYEVYNVFNEVQFTNLNASFTYTTPAGAPLNSQNTNANTGKYTASGTTLAAGTITPRVQSLTIRLDW
Ga0190274_130794081	3300018476	Soil	LGGRKSSGVRLRYEVYNLFNEVQFTNLNAAFTYTTPAGAPLNSSNTNANTGKYTASGTTLAAGTITPRVQSLTVRFDW
Ga0247745_10775872	3300022898	Soil	FNVFNEVQFTNMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW
Ga0247800_10260252	3300023263	Soil	TLSRRFPVTFMGRKNSGVKLQFQTFNVFNEVQFTNMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW
Ga0247794_103400131	3300024055	Soil	EVQFTNMNASYTFTGANNATNSNANTGKYVASGDGLAAGTIAPRTMGLTVRFDW
Ga0207688_106354951	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	QTFNVFNEVQFTNMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFD
Ga0207662_102884922	3300025918	Switchgrass Rhizosphere	NMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW
Ga0207706_113743151	3300025933	Corn Rhizosphere	EVQFTNMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW
Ga0207679_107495701	3300025945	Corn Rhizosphere	NEVQFTNMNASYTFTGANNSVNNSANTGKYTQSGDGLAAGTIAPRIMSLTLRFDW
Ga0207678_110223702	3300026067	Corn Rhizosphere	VFNEVQFTNMNASYTFTGTNNATNNSANTGKYVQGNTSDGLAAGTIAPRTMGITVRFDW
Ga0209468_10704594	3300026306	Soil	SGIKLQLQAYNVFNEVQFTNLNAAFTFTGPNNSVINSANTGKYTATGTGLAAGTIQPRTMGLTVRLDW
Ga0209266_11588513	3300026327	Soil	QFTNLNAAFTFTGPNNSVINSANTGKYTATGTGLAAGTIQPRTMGLTVRLDW
Ga0209376_12304642	3300026540	Soil	QFTTLNATYAFTGANNSVNNNANTGKYTAAGGSNLAAGTIQPRTMGLTVRLDW
Ga0209814_100878412	3300027873	Populus Rhizosphere	NVFNEVQFTTLNATYNFTGPNNTINNNANTGKYVATGGSNLAAGTIQPRTLGLTIRFDW
Ga0209814_102850981	3300027873	Populus Rhizosphere	VKLQLQAFNVFNEVQFTNMNTTFQFTGANNATQRNVDLGKYTATGNGLAAGTIAPRTMGLTVRFDW
Ga0307413_103180491	3300031824	Rhizosphere	VFNEVQFTNLNASFTYTTPAGAPLNSSNTNANTGKYTASGSTLAAGTITPRVMALTVRFD
Ga0310907_103190601	3300031847	Soil	VYNLFNEVQFTNLNASFTYTTPAGQPLNSSNTNANTGKYTASGTTLAAGTITPRVQSLTVRFDW
Ga0310907_104756872	3300031847	Soil	RKNAGFKVQVQAYNVFNETQFTNLNATYTFTGTGNVQNTNTNTGKYTQTGNGLAAGTIQPRVIGLTARFDW
Ga0307410_109031361	3300031852	Rhizosphere	YEVYNVFNEVQFTNLNASFTFTTPAGAPLNSVNTNANTGKYTASGTTLAAGTITPRVMALTVRFDW
Ga0307406_104171021	3300031901	Rhizosphere	GVRLRWEIYNVFNEVQFTNMNASFTFTGTNNSVNNNANTGKYTASGTTLAAGTITPRVMALTLKFDW
Ga0307406_115464671	3300031901	Rhizosphere	SGIRLRYEVYNVFNEVQFTNMNASFTFTTPAGQPLNSVNTNAYTGKYTASGSTLAAGTITPRVMALTVRFDW
Ga0310900_108675201	3300031908	Soil	NMNASYTFTGPNNSQNNNANTGKYTATGTTLAAGTITPRVMALTVRFDW
Ga0308175_1005539613	3300031938	Soil	GIRLQFQAYNVFNEVQFTNLDATYRFTGPNNSVNNSTTTGQYVASGEGLAAGTIAPRTLGITARFDW
Ga0307409_1011021031	3300031995	Rhizosphere	NSGVRLRWEIYNVFNEVQFTNMNASFTFTGTNNSVNNNANTGKYTASGTTLAAGTITPRVMALTLKFDW
Ga0310897_104343642	3300032003	Soil	AYNVFNETQFTNLNATYTFTGTGNVQNTNTNTGKYTQTGNGLAAGTIQPRVIGLTARFDW
Ga0310906_107880322	3300032013	Soil	IQAYNLFNEVQFTNMNAAFTFTGANNSVLNSANTGRYVATTDTSLAAGTIAPRVIAFMLRADF
Ga0307471_1028218782	3300032180	Hardwood Forest Soil	SWDITLSRRFPISLGGRRNSGIKFQLQAYNVFNEVQFTNLNAAFTFTGTNNSVINSANTGKYTATGTGLAAGTIQPRTMGLTVRLDW
Ga0364923_0094143_3_203	3300034690	Sediment	IKFQLQAYNVFNEVQFTNLNAAFTFTGPNNSVLNSANTGKYTATGNGLAAGTIAPRVLGLTVRLDW

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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