Metagenome Family F080423

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080423
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	100 residues
Representative Sequence	MNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKSE
Number of Associated Samples	93
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.79 %
% of genes near scaffold ends (potentially truncated)	31.30 %
% of genes from short scaffolds (< 2000 bps)	89.57 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.913 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.391 % of family members)
Environment Ontology (ENVO)	Unclassified (29.565 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.696 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.81% β-sheet: 0.00% Coil/Unstructured: 42.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF04519	Bactofilin	13.91
PF00248	Aldo_ket_red	5.22
PF13519	VWA_2	2.61
PF07584	BatA	2.61
PF01551	Peptidase_M23	0.87
PF01694	Rhomboid	0.87
PF00082	Peptidase_S8	0.87
PF00903	Glyoxalase	0.87
PF10282	Lactonase	0.87
PF02470	MlaD	0.87
PF02738	MoCoBD_1	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	13.91
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.91 %
Unclassified	root	N/A	6.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.91 %
Unclassified	root	N/A	6.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.91 %
Unclassified	root	N/A	6.09 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.22 %
Unclassified	root	N/A	6.09 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	82.61 %
Unclassified	root	N/A	6.09 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	71.30 %
Unclassified	root	N/A	6.09 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	71.30 %
Unclassified	root	N/A	6.09 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.87 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.87 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	71.30 %
Unclassified	root	N/A	6.09 %
Aromatoleum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum	0.87 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.87 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	71.30 %
Unclassified	root	N/A	6.09 %
unclassified Aromatoleum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum	0.87 %
Weeksellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae	0.87 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	71.30 %
Unclassified	root	N/A	6.09 %
Aromatoleum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	0.87 %
Chryseobacterium group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group	0.87 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	71.30 %
Unclassified	root	N/A	6.09 %
Chryseobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium	0.87 %
Aromatoleum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	0.87 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	71.30 %
Unclassified	root	N/A	6.09 %
Chryseobacterium indologenes	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium → Chryseobacterium indologenes	0.87 %
Aromatoleum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	0.87 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105057201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	954	Open in IMG/M
3300002908\|JGI25382J43887_10202842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	952	Open in IMG/M
3300004082\|Ga0062384_100489315	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300004092\|Ga0062389_104265518	Not Available	538	Open in IMG/M
3300004092\|Ga0062389_104848963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300004152\|Ga0062386_100246934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1414	Open in IMG/M
3300004152\|Ga0062386_100603291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	897	Open in IMG/M
3300004152\|Ga0062386_101016630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	687	Open in IMG/M
3300005166\|Ga0066674_10252334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	836	Open in IMG/M
3300005176\|Ga0066679_10483005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	809	Open in IMG/M
3300005178\|Ga0066688_10811769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	584	Open in IMG/M
3300005187\|Ga0066675_10014713	All Organisms → cellular organisms → Bacteria	4253	Open in IMG/M
3300005440\|Ga0070705_101946882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	501	Open in IMG/M
3300005444\|Ga0070694_100129805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1819	Open in IMG/M
3300005444\|Ga0070694_100203705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1476	Open in IMG/M
3300005446\|Ga0066686_10138575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1601	Open in IMG/M
3300005467\|Ga0070706_100015421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7058	Open in IMG/M
3300005471\|Ga0070698_100223976	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300005518\|Ga0070699_102092945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	517	Open in IMG/M
3300005536\|Ga0070697_100295111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1393	Open in IMG/M
3300005536\|Ga0070697_100613924	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300005546\|Ga0070696_100191414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1523	Open in IMG/M
3300005552\|Ga0066701_10284365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1025	Open in IMG/M
3300005553\|Ga0066695_10576847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	679	Open in IMG/M
3300005561\|Ga0066699_10779246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	675	Open in IMG/M
3300006032\|Ga0066696_10186739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1315	Open in IMG/M
3300006046\|Ga0066652_100635360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1011	Open in IMG/M
3300006046\|Ga0066652_101345027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	671	Open in IMG/M
3300006173\|Ga0070716_100186752	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300006176\|Ga0070765_101914186	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium → Chryseobacterium indologenes	555	Open in IMG/M
3300006794\|Ga0066658_10180145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1102	Open in IMG/M
3300006796\|Ga0066665_10609748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	876	Open in IMG/M
3300006796\|Ga0066665_11236141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	571	Open in IMG/M
3300006797\|Ga0066659_10334365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1168	Open in IMG/M
3300006854\|Ga0075425_100015235	All Organisms → cellular organisms → Bacteria	8307	Open in IMG/M
3300006871\|Ga0075434_101029365	Not Available	837	Open in IMG/M
3300006904\|Ga0075424_102666409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	522	Open in IMG/M
3300009012\|Ga0066710_100908097	Not Available	1356	Open in IMG/M
3300009012\|Ga0066710_101059428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1253	Open in IMG/M
3300009012\|Ga0066710_104022576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	550	Open in IMG/M
3300009137\|Ga0066709_101618122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	926	Open in IMG/M
3300009147\|Ga0114129_10449809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1689	Open in IMG/M
3300009147\|Ga0114129_11652014	Not Available	783	Open in IMG/M
3300010301\|Ga0134070_10216134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	707	Open in IMG/M
3300010320\|Ga0134109_10154075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	829	Open in IMG/M
3300010325\|Ga0134064_10506339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	502	Open in IMG/M
3300010336\|Ga0134071_10211151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	959	Open in IMG/M
3300010339\|Ga0074046_10500416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	726	Open in IMG/M
3300010341\|Ga0074045_10283003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1090	Open in IMG/M
3300010343\|Ga0074044_10082900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2165	Open in IMG/M
3300010343\|Ga0074044_10186877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1379	Open in IMG/M
3300010343\|Ga0074044_10674074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	675	Open in IMG/M
3300010364\|Ga0134066_10264405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	602	Open in IMG/M
3300010379\|Ga0136449_100031832	All Organisms → cellular organisms → Bacteria → Proteobacteria	12709	Open in IMG/M
3300011444\|Ga0137463_1332837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	549	Open in IMG/M
3300012198\|Ga0137364_10542281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	875	Open in IMG/M
3300012201\|Ga0137365_10334629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1120	Open in IMG/M
3300012204\|Ga0137374_10015216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8879	Open in IMG/M
3300012205\|Ga0137362_11060337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	689	Open in IMG/M
3300012206\|Ga0137380_11066391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	689	Open in IMG/M
3300012207\|Ga0137381_10426768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1157	Open in IMG/M
3300012208\|Ga0137376_10527508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1024	Open in IMG/M
3300012208\|Ga0137376_11136651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	668	Open in IMG/M
3300012211\|Ga0137377_10584867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1054	Open in IMG/M
3300012349\|Ga0137387_10185404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1491	Open in IMG/M
3300012350\|Ga0137372_10077873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2831	Open in IMG/M
3300012353\|Ga0137367_11053576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	552	Open in IMG/M
3300015359\|Ga0134085_10285734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	723	Open in IMG/M
3300015371\|Ga0132258_13875413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1018	Open in IMG/M
3300017659\|Ga0134083_10279679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	704	Open in IMG/M
3300017930\|Ga0187825_10444102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Aromatoleum → unclassified Aromatoleum → Aromatoleum sp.	502	Open in IMG/M
3300017936\|Ga0187821_10307421	Not Available	631	Open in IMG/M
3300017936\|Ga0187821_10447230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	535	Open in IMG/M
3300017975\|Ga0187782_11158816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	604	Open in IMG/M
3300017993\|Ga0187823_10107161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	842	Open in IMG/M
3300017997\|Ga0184610_1179400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	703	Open in IMG/M
3300018027\|Ga0184605_10378144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	637	Open in IMG/M
3300018028\|Ga0184608_10336619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	663	Open in IMG/M
3300018052\|Ga0184638_1040836	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300018056\|Ga0184623_10057050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1788	Open in IMG/M
3300018075\|Ga0184632_10354559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	626	Open in IMG/M
3300018076\|Ga0184609_10208297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	912	Open in IMG/M
3300018078\|Ga0184612_10216293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	993	Open in IMG/M
3300018084\|Ga0184629_10112118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1347	Open in IMG/M
3300018085\|Ga0187772_10884707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	648	Open in IMG/M
3300018482\|Ga0066669_10002368	All Organisms → cellular organisms → Bacteria	7718	Open in IMG/M
3300018482\|Ga0066669_10264593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1370	Open in IMG/M
3300021420\|Ga0210394_10214529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1680	Open in IMG/M
3300021432\|Ga0210384_10161329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2013	Open in IMG/M
3300021432\|Ga0210384_10529339	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300022534\|Ga0224452_1053084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1206	Open in IMG/M
3300022756\|Ga0222622_11092560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	587	Open in IMG/M
3300025910\|Ga0207684_10270053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1467	Open in IMG/M
3300025910\|Ga0207684_10288150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1416	Open in IMG/M
3300025922\|Ga0207646_10085958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2813	Open in IMG/M
3300025922\|Ga0207646_10528443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1062	Open in IMG/M
3300025922\|Ga0207646_10647350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	947	Open in IMG/M
3300026297\|Ga0209237_1287892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	504	Open in IMG/M
3300026325\|Ga0209152_10097774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1102	Open in IMG/M
3300026343\|Ga0209159_1226112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	576	Open in IMG/M
3300026538\|Ga0209056_10413812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	814	Open in IMG/M
3300027737\|Ga0209038_10099555	Not Available	878	Open in IMG/M
3300027812\|Ga0209656_10175843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1053	Open in IMG/M
3300029944\|Ga0311352_10672878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	820	Open in IMG/M
3300029999\|Ga0311339_11394348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	630	Open in IMG/M
3300031234\|Ga0302325_10011712	All Organisms → cellular organisms → Bacteria → Proteobacteria	18864	Open in IMG/M
3300031720\|Ga0307469_10232854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1467	Open in IMG/M
3300031720\|Ga0307469_11225336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	710	Open in IMG/M
3300031820\|Ga0307473_10153687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1312	Open in IMG/M
3300031962\|Ga0307479_10370847	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300032180\|Ga0307471_100478000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1390	Open in IMG/M
3300032180\|Ga0307471_100887287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1059	Open in IMG/M
3300034176\|Ga0364931_0047516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1297	Open in IMG/M
3300034178\|Ga0364934_0050004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.78%
Host-Associated	Host-Associated	5.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.91%
Aquatic	Environmental → Aquatic	20.87%
Plants	Host-Associated → Plants	5.22%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.57%
Freshwater	Environmental → Aquatic → Freshwater	10.43%
Sediment	Environmental → Aquatic → Sediment	10.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Peat	Environmental → Terrestrial → Peat	2.61%
Floodplain	Environmental → Terrestrial → Floodplain	1.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.57%
Loam	Environmental → Terrestrial → Soil → Loam	13.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.61%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	7.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.09%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.22%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	4.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.87%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1050572012	3300000364	Soil	MSPSYAWLILLVLSFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKHERRRMAAAIVKEKGLVPKVRPKSE*
JGI25382J43887_102028422	3300002908	Grasslands Soil	LTLAVIIAVATIRTKARHRRIRKALGFPARMETSSAEARARHAVRVFQETDHRLSTTARRLSKEERRRMATAIVKEKGLLPKVRPKSE*
Ga0062384_1004893152	3300004082	Bog Forest Soil	MNTGVLLLAGLVFAFVVVIAVATLRTKSRQRRIRKALGLPLRMETSTAEAQAKQAVRVFEQTDLRLTTTAPRLSREERHKMAGAIVKEKGLLPKAAARHKGGGSAR*
Ga0062389_1042655181	3300004092	Bog Forest Soil	NRKSMNSGALLLAGLMLVFVVVIAVATLRTKARQRGIRKALGLPLRMQTSTAEAQARQAVRVFEQTDLRLTTTAPRLSRAERQKMASAIVKEKGLLPKAPARRKRGTAR*
Ga0062389_1048489631	3300004092	Bog Forest Soil	LLAGLMFVFAVVIAVATLRTKARQRGIRKALGLPLRMPTSTAEAQARQAVRVFEQTDLRLTTTAPRLSRAERRKMASAIVKEKGLLPKAPARRKRGSAR*
Ga0062386_1002469342	3300004152	Bog Forest Soil	MNSGALLLTGLALVLALVIAIATLRTKARHRRIRRALGLPVRMQTSTAEAQARQAVRVFEQTDLRLTTTAPRLSREERRKMASAIVKEKGLLPKAQASRKLGSEN*
Ga0062386_1006032911	3300004152	Bog Forest Soil	MNPGALLLAGLMLAFVVVIAVATLRTKARQRSIRRALGLPLRMQTSTAEAQARQAVRVFEQTDLRLTTTAPRLSKAERREMATAIVKEKGLLPKATARPTSRSAR*
Ga0062386_1010166301	3300004152	Bog Forest Soil	MNTGALLLSGLALALVVVIAVATLRTKARHRRIRKALGLPLRMETSTAEAQARQAVRVFEQTDLRLTTTAPRLSNEERYKMAGAIVREKGLLPKAARQKGSGSAQ*
Ga0066674_102523341	3300005166	Soil	MSPSYAWLILLVLSFAVVIAVATIRTKVRHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMATA
Ga0066679_104830052	3300005176	Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0066688_108117691	3300005178	Soil	MNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRRMATA
Ga0066675_100147132	3300005187	Soil	MNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKSE*
Ga0070705_1019468822	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ATIRTKARHRRIRKALGLPGRMDTASAEAQARQAVRVFQETDQRLSTTARRLTKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0070694_1001298052	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMATAIVKEKGLLPKARPPE*
Ga0070694_1002037052	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRPSYAWLILLVLIFAVVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0066686_101385752	3300005446	Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFQETDQRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0070706_1000154214	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMAAAIVKEKGLLPKARPPE*
Ga0070698_1002239761	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VATIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTAQRLSKEERRRMAAAIVKEKGLLPKARPPE*
Ga0070699_1020929451	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRTSYASLIVFALVFVVVIAVAIIRTKARHRRIRKALGLPARMETSSAEAQARHAVRVFLETDHRLGTTARRLSKEERRRMAAAIVKEKGLLPK
Ga0070697_1002951113	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0070697_1006139241	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PSLLSLTMSTGFASLIFLALILAVVIAAATIRTKAHHRRIRKALGLPAKMSSSSAEAQAKQAVRVFIETDRRLSTSARRLSRRERQEMATTIVKEKGLVPRTPSTGGLKPDRRRR*
Ga0070696_1001914143	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LWDNTAPRLSVRIFPRAMRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMDTASAEAQARQAVRVFQETDQRLSTTARRLTKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0066701_102843652	3300005552	Soil	LILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0066695_105768472	3300005553	Soil	WLILLVLSFAVVIAVATIRTKARHRGIRKALGLPARMETSSAEAQARQAVRVFQETDQRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKSE*
Ga0066699_107792462	3300005561	Soil	LILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRPKSE*
Ga0066696_101867391	3300006032	Soil	LWDNTAPEAVRARFPRAMNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEE
Ga0066652_1006353601	3300006046	Soil	LWDNTAPEAVRARFPRAMNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKSE*
Ga0066652_1013450272	3300006046	Soil	VGQYRASVVLAHFPRAMRPSYAWLILLVLSFAVVIAVATIRTKVRHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMATAIVKGKGLLPKARPKSE*
Ga0070716_1001867523	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RASVVRAHFPRAMRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMDTASAEAQARQAVRVFQETDQRLSTTARRLTKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0070765_1019141861	3300006176	Soil	MNTGAFLWASVVFAFVVIIAVATIRTKSRQRNIRRALGLPLRMGTSSAEAQARQAVRVFEQTNLRLTTTARRLSKDERRSMATAIVKEKGLLPKVRRDKAEK*
Ga0066658_101801453	3300006794	Soil	LWDNTAPEAVRARFPRAMNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKEKGLLPKAGRKSE*
Ga0066665_106097481	3300006796	Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEK
Ga0066665_112361411	3300006796	Soil	MSPGYTWLILLVLTLAVIIAVATIRTKARHRRIRKALGFPARMETSSAEARARHAVRVFQETDHRLSTTARRLSKEERRRMATAIVKEKGLLPKVRPRSE*
Ga0066665_114669352	3300006796	Soil	IRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKSE*
Ga0066659_103343652	3300006797	Soil	MSPSYTWLTFLVLSFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEARARQAVRVFQETDHRLSTTARRLSKEERRKIASAIVKEKGLLPKMRRKRS*
Ga0075425_10001523510	3300006854	Populus Rhizosphere	MSMGYVSLIILALALAIVLAVATIRTKAHHRRIRRALGLPAKMASASAEAQAKRAVRVFMETDARLRTTARRLSKKERRAMATAIVKEKGLVPRTPPGGESKPG*
Ga0075434_1010293653	3300006871	Populus Rhizosphere	AMSTGSVSLIVLAFILAIVIAAATIRTKAHQRRIRRALGLPAKMSTSSAEAQARQAVRVVIETDRRLSTTAPRMSKRERREMATTIVKEKGLVPRTPSTGGLKRNQRPR*
Ga0075424_1026664092	3300006904	Populus Rhizosphere	LIVLAFILAIVIAAATIRTKAHQRRIRRALGLPAKMSTSSAEAQARQAVRVVIETDRRLSTTAPRMSKRERREMATTIVKEKG
Ga0066710_1009080973	3300009012	Grasslands Soil	MSTGYVSLIVLALILAIVIAAATIRTKAHQRRIRRALGLPAKMSTSSTEAQARQAVRVFIETDRRLSTTAPRMSKRERREMATTIVKEKGLVPKTPSTGGLKRNQRRR
Ga0066710_1010594282	3300009012	Grasslands Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRPKSE
Ga0066710_1040225761	3300009012	Grasslands Soil	SPSYTWLTFLVLSFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEARARQAVRVFQETDHRLSTTARRLSKEERRKIASAIVKEKGLLPKLRRKRS
Ga0066709_1016181221	3300009137	Grasslands Soil	MSTGYVSLIVLALLLAIVIAAATIRTKARHRRIRRALGLPAKMSTSSVEAQARQAVRVFIETDRRLSTTAPRMSKRERREMATTIVKEKGLVPKTPSTGGLKRNQRPR*
Ga0114129_104498093	3300009147	Populus Rhizosphere	MSTGYASLIVLALILAIVIAVATIRTKAHQRRIRRALGLPAKMSSSSAEAQAKQAVRVFIETDRRLSTTAWRLSKRERQEMATTIVKEKGLVPKTPSTGGLKRNQRPR*
Ga0114129_116520142	3300009147	Populus Rhizosphere	MYLRSMSMGYVSLIILALALAIVLAVATIRTKAHHRRIRRALGLPAKMASASAETQAKRAVRVFMETDARLRTTARRLSKKERRAMATAIVKEKGLVPRTPPGGESKPG*
Ga0134070_102161342	3300010301	Grasslands Soil	MSPSYAWLILLVLSFAVVIAVATIRTKVRHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMATAIVKGKGLLPKARPKSE*
Ga0134109_101540751	3300010320	Grasslands Soil	PSYAWLILLVLSFAVVIAVATIRTKVRHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMATAIVKGKGLLPKARPKSE*
Ga0134064_105063392	3300010325	Grasslands Soil	MNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKEKGLVPKARP
Ga0134071_102111511	3300010336	Grasslands Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFKETDQRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0074046_105004162	3300010339	Bog Forest Soil	IAVATLRTKARHRRIRRALGLPVRMQTSTAEAQARQAVRVFEQTDLRLTTTAPRLSREERRKMASAIVKEKGLLPKAQASRKLGSEN*
Ga0074045_102830031	3300010341	Bog Forest Soil	MLHAVTTRQSQPMNTGALVLAGLVLVFVVVIAAATLRTKARQRRIRKALGLPARMETSTAEAQARQAVRVFEQTNLRLTTTAPRLPNEERRKMARAIVREKGLLPKATTRRKLKSEQ*
Ga0074044_100829003	3300010343	Bog Forest Soil	MHTGAIISAGLALAFILVIVAATLRTKSRQRQIRRALGLPARMGTSTAEAQARQAVRAFEETDLRLTTTAPLLSKEERRKMAGAIVREKGLLPKTTVRHTGHSPR*
Ga0074044_101868772	3300010343	Bog Forest Soil	MNTGALLLAGLVFAFIVVIAVATLRTKSRQRRIRKALGLPLRMETSTAEAQARQAVRVFEQTDHRLTTTAPRLSKEERHKMAGAIVKDKGLLPKSTARYKGGGSAH*
Ga0074044_106740742	3300010343	Bog Forest Soil	MNSGALLLAGLMLAFVVVIAVATLRTKARQRSIRRALGLPLRMQTSTAEAQARQAVRVFEQTDLRLTTTAPRLSKAERREMATAIVKEKGLLPKATARPTSRSAR*
Ga0134066_102644052	3300010364	Grasslands Soil	MSPSYAWLILLVLSFAVVIAVATIRTKVRHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMATAIVKGKGLLPK
Ga0136449_1000318329	3300010379	Peatlands Soil	MNTGAILLTGLALVFVLVIAAATLRTKARHRRIRRALGLPARMETSTAEAQARQAVRVFAQTDLRLTTTAPRLSQEERRKMAGAIVREKGLLPKAKARHKLGSEH*
Ga0137463_13328372	3300011444	Soil	MNPATVSLILFVFLFVVVIAVATIRTKARHRKIRKALGLPAKMRTSTAEAQARNAVRVFEETSSRLTTTGAGHLSNDERRKMARSIVKEKGLLPKVSRRKTP*
Ga0137364_105422811	3300012198	Vadose Zone Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETSSAEAQARQAVRVFQETDHRLSTTTRRLSKQERRRMAAAI
Ga0137365_103346291	3300012201	Vadose Zone Soil	MNPGYTWLILLVLSFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHKLSTTARRLSKEERRRMATAIVKEKGLLPKARPKSE*
Ga0137374_100152166	3300012204	Vadose Zone Soil	MSPSYTWLILLALTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMAAAIVKEKGLLPKVRPKSE*
Ga0137362_110603372	3300012205	Vadose Zone Soil	MSPSYAWLILLVLSFAVVIAVATIRTKVRHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMATAIVRGKGLLPKARPKSE*
Ga0137380_110663912	3300012206	Vadose Zone Soil	MSPGYTWLILLVLSFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHKLSTTARRLSKEERRRMATAIVKEKGLLPKVRPKSE*
Ga0137381_104267683	3300012207	Vadose Zone Soil	MRPSYAWLILLVLIFAAVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKE
Ga0137376_105275082	3300012208	Vadose Zone Soil	MNPGYTWLILLVLSFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAGRVFQETDHKLSTTARRLSKEERRRMATAIVKEKGLLPKARPKSE*
Ga0137376_111366511	3300012208	Vadose Zone Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDQRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0137377_105848672	3300012211	Vadose Zone Soil	MRPSYAWLILLVLSFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAGRVFQETDHKLSTTARRLSKEERRRMATAIVKEKGLLPKARPKSE*
Ga0137387_101854042	3300012349	Vadose Zone Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKARPKSESKTE*
Ga0137372_100778734	3300012350	Vadose Zone Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLPKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0137367_110535761	3300012353	Vadose Zone Soil	YTWLILLALTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMAAAIVKEKGLLPKVRPKSE*
Ga0134085_102857341	3300015359	Grasslands Soil	VVRAHFPRAMRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFQETDQRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE*
Ga0132258_138754132	3300015371	Arabidopsis Rhizosphere	MSTGYASLIVLALILGVVVAVATIRTKSHQRRVRRALGLPARMASASAETQARHAVRVFMETDRRLPTTARRLSKKERRAMATAIVKEKGLMPRTPVDGDSRNK*
Ga0134083_102796792	3300017659	Grasslands Soil	VIAVATIRTKARHRRIRKALGLPARIETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE
Ga0187825_104441022	3300017930	Freshwater Sediment	IAVATIRTKARHRRIRKALGLPAKMRTSTSEAQARNAVRVFQETDMKLSSTLPSLSNQERVKMARKIVKEKGLLPKTSRPTTPSK
Ga0187821_103074212	3300017936	Freshwater Sediment	VVIIAGATIRTKTRHRRIRKALGLQAKMRTSTSEAQARNAVRVFEETDTKLSSTLPSLSHQERRKMVRKIVKEKGLLPKSSPPRS
Ga0187821_104472302	3300017936	Freshwater Sediment	DNPAPSLLTSVSASAPAMNSATVSLALFVVLFIVIIAVATIRTKARHRRIRKALGLPAKMRTSTSEAQARNAVRVFQETDMKLSSTLPSLSNQERVKMARKIVKEKGLLPKTSRPTTPSK
Ga0187782_111588161	3300017975	Tropical Peatland	MHTGATDLVALVLVFVVILVVATLRTKARQRRIRKALGLPARMDTSTAEAQARQAVRVFEQTDLRLTTTAPRLSKRQRRELVVSIVKEKGLLPKSRAKLPQP
Ga0187823_101071612	3300017993	Freshwater Sediment	MNSATVSLALFVVLFIVIIAVATIRTKARHRRIRKALGLPAKMRTSTSEAQARNAVRVFQETDMKLSSTLPSLSNQERVKMARKIVKEKGLLPKTSR
Ga0184610_11794002	3300017997	Groundwater Sediment	MSTNYISLIVFVLIFVVVIAVAMIRTKARHRRIRKALGLPAKMETSSAEAQARHAVRVFQETNQRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKTE
Ga0184605_103781441	3300018027	Groundwater Sediment	MSTSYVSLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSSAEAQARHAVRVFQETDNRLSTAARRLSKVERRRMATAIVKEKGLLPKVRPTE
Ga0184608_103366191	3300018028	Groundwater Sediment	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLGTTARRLSKEERRRMATAIVKEKGLLPKVRPTE
Ga0184638_10408362	3300018052	Groundwater Sediment	VAVIAVAMIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLGTTARRLSKEERRRMAAAIVKEKGLLPKTRPKSESKTE
Ga0184623_100570503	3300018056	Groundwater Sediment	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSSAEAQARHAVRVFQETNQRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKTE
Ga0184632_103545591	3300018075	Groundwater Sediment	MSTNYIPLIVFVLIFVAVIAVAMIRTKARHHRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMAAAIVKEKGLLPKVRPTE
Ga0184609_102082972	3300018076	Groundwater Sediment	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSSAEAQARHAVRVFQETNQRLSTTARRLSKEERRQMATAIVKEKGLLPKARPTE
Ga0184612_102162932	3300018078	Groundwater Sediment	MSTNYISLIVFVLIFVAVIAVAMIRTKARHRRIRQALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKDERRRMATAIVKEKGLLPKARPKTE
Ga0184629_101121183	3300018084	Groundwater Sediment	MSTNYIPLIVFVLIFVAVIAVAMIRTKARHRRIRKALGLPAKMDTSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMATAIVKEKGLLPKARPTE
Ga0187772_108847071	3300018085	Tropical Peatland	MTSGVFLLTVMVVVFAIVIAAATLRTKARQRRIRKALGLPARMATSTAEAQARQAVRVFEQTDLRLTTTAPRLSREERRKMACAIVREKGLLPRVPTERKLGSEH
Ga0066669_100023684	3300018482	Grasslands Soil	MNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKSE
Ga0066669_102645931	3300018482	Grasslands Soil	ENSRPSLLSPAMSTGYVSLIVLALILAIVIAAATIRTKAHQRRIRRALGLPAKMSTSSAEAQARQAVRVFIETDRRLSTTAPRMSKRERREMATTIVKEKGLVPKTPSTGGLKRNQRRR
Ga0210394_102145292	3300021420	Soil	MNAGAILLAGVVTVFVIVIAVATIRTKARQRNIRRALGLPARMQTSTAEAQARQAVRVFEQTDLRLTTTAQSLSKAERRKMAAAIVKEKGLLPKARRVKAKES
Ga0210384_101613293	3300021432	Soil	MNPATVSITLFILLFVVVLVVATIRTKARHRKIRKALGLPAKMRTSTAEAQARNAVRVFEETSSRLTTTGAGRLSNEERRKMARSIVKEKGLLPKVSRRKAP
Ga0210384_105293392	3300021432	Soil	VFAFVVIIAVATIRTKSRQRNIRRALGLPLRMGTSSAEAQARQAVRVFEQTNLRLTTTARRLSKDERRSMATAIVKEKGLLPKVRRDKAEK
Ga0224452_10530843	3300022534	Groundwater Sediment	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLGTTARRLSKEERRRMAAAIVKEKGLLPKTRPTE
Ga0222622_110925601	3300022756	Groundwater Sediment	FVLVIAVAIIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMATAIVKEKGLLPKARPTE
Ga0207684_102700533	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMATAIVKEKGLLPKARPPE
Ga0207684_102881502	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VGQYRASVVRAHFPRAMRPSYAWLILLVLIFAVVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE
Ga0207646_100859584	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRPSYAWLILLVLIFAVVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE
Ga0207646_105284433	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DNTAPRLSVRIFPRAMRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMDTASAEAQARQAVRVFQETDQRLSTTARRLTKQERRRMAAAIVKEKGLLPKVRAKSE
Ga0207646_106473502	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMAAAIVKEKGLLPKARPPE
Ga0209237_12878921	3300026297	Grasslands Soil	MSPGYTWLILLVLTLAVIIAVATIRTKARHRRIRKALGFPARMETSSAEARARHAVRVFQETDHRLSTTARRLSKEERRRMATAIVKEKGLLPKVRPKSE
Ga0209152_100977743	3300026325	Soil	LWDNTAPEAVRARFPRAMNLGYAWLILLVLTFAVVIAVATIRTKARHRRIRKALGLPARMETSSAEAQARQAVRVFQETDHRLSTTARRLSKEERRQMATAIVKEKGLLPKAGRKSE
Ga0209159_12261122	3300026343	Soil	WLILLVLSFAVVIAVATIRTKARHRGIRKALGLPARMETSSAEAQARQAVRVFQETDQRLSTTARRLSKEERRQMATAIVKEKGLLPKARPKSE
Ga0209056_104138121	3300026538	Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDHRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE
Ga0209038_100995552	3300027737	Bog Forest Soil	MNTGVLLLAGLVFAFVVVIAVATLRTKSRQRRIRKALGLPLRMETSTAEAQAKQAVRVFEQTDLRLTTTAPRLSREERHKMAGAIVKEKGLLPKAAARHKGGGSAR
Ga0209656_101758432	3300027812	Bog Forest Soil	MNSGAFLLTGLALVFALVIAVATLRTKARHRRIRKALGLPARMETSTAEAQARQAVRVFEQTDLRLTTTAPRLSREERRKMASAIVKEKGLLPKAQPGHKLGSEH
Ga0311352_106728782	3300029944	Palsa	VATLRTKARQRGIRKALGLPLRMPTSTAEAQARQAVRVFEQTDLRLTTTAPRLSRAERRKMASAIVKEKGLLPKAPARRKRGTTP
Ga0311339_113943482	3300029999	Palsa	MTSGALLLAALILVFVVVIAVATLRTKARQRGIRKALGLPLRMPTSTAEAQARQAVRVFEQTDLRLTTTAPRLSRAERRKMASAIV
Ga0302325_1001171220	3300031234	Palsa	MTSGALLLAALILVFVVVIAVATLRTKARQRGIRKALGLPLRMPTSTAEAQARQAVRVFEQTDLRLTTTAPRLSRAERRKMASAIVKEKGLLPKAPARRKRGTTP
Ga0307469_102328543	3300031720	Hardwood Forest Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFQETDQRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE
Ga0307469_112253362	3300031720	Hardwood Forest Soil	MSPSYAWLILLVLSFAVVIAVATIRTKARHRRIRKALGLPARMDTSSAEAQARQAVRVFQETDHRLSTTARRLSKQERRQMAAAIVKEKGLLPKARPKSE
Ga0307473_101536871	3300031820	Hardwood Forest Soil	MRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPGRMETASAEAQARQAVRVFQETDQRLTTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE
Ga0307479_103708472	3300031962	Hardwood Forest Soil	MGSGAILLTFFVLVFVVVIAVATIRTKARQRRIRKALGLPARMDTSSAEAQARQAVRVFEQTDFRLTTTARRLSKDERRQMAKAIVTEKGLLPKVRRKKEKA
Ga0307471_1004780002	3300032180	Hardwood Forest Soil	VGQYRASVVRAHFPRAMRPSYAWLILLVLIFAIVIAVATIRTKARHRRIRKALGLPARMETASAEAQARQAVRVFQETDQRLSTTARRLSKQERRRMAAAIVKEKGLLPKVRAKSE
Ga0307471_1008872871	3300032180	Hardwood Forest Soil	MSTNYIPLIVFVLIFVLVIAVAIVRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMATAIVKEKGLLPKGRPTE
Ga0364931_0047516_201_500	3300034176	Sediment	MSTNYIPLIVFVLIFVAVIAVAMIRTKARHRRIRKALGLPAKMETSTAEAQARHAVRVFQETDQRLSTTARRLSKEERRRMATAIVKEKGLLPKTRPTE
Ga0364934_0050004_455_754	3300034178	Sediment	MSTNYISLIVFVLIFVVVIAVATIRTKARHRRIRKALGLPAKMETSSAEAQARHAVRVFQETDQRLSTTARRLSKEERRQMAAAIVKEKGLLPKARPTE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080423

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences