Metagenome / Metatranscriptome Family F080417

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080417
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	88 residues
Representative Sequence	VTATSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDGARPVFS
Number of Associated Samples	88
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	38.26 %
% of genes from short scaffolds (< 2000 bps)	76.52 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.522 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (21.739 % of family members)
Environment Ontology (ENVO)	Unclassified (32.174 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.435 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.48% β-sheet: 25.84% Coil/Unstructured: 60.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00689	Cation_ATPase_C	33.91
PF17032	zinc_ribbon_15	23.48
PF08282	Hydrolase_3	7.83
PF09851	SHOCT	3.48
PF02517	Rce1-like	3.48
PF00702	Hydrolase	3.48
PF15420	Abhydrolase_9_N	2.61
PF10081	Abhydrolase_9	1.74
PF00696	AA_kinase	0.87
PF13246	Cation_ATPase	0.87
PF00185	OTCace	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	33.91
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	7.83
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	7.83
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	7.83
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	7.83
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	7.83
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	3.48
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	3.48

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.52 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.48 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.48 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	80.87 %
Unclassified	root	N/A	3.48 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	39.13 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	27.83 %
Unclassified	root	N/A	3.48 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.74 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.87 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.87 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	39.13 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	27.83 %
Unclassified	root	N/A	3.48 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.87 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.87 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	39.13 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	27.83 %
Unclassified	root	N/A	3.48 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.74 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.87 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.87 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	39.13 %
Actinomadura barringtoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	27.83 %
Unclassified	root	N/A	3.48 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.74 %
Geodermatophilus ruber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus ruber	0.87 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.87 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10135669	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005175\|Ga0066673_10304125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	930	Open in IMG/M
3300005179\|Ga0066684_10963225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300005332\|Ga0066388_100242428	All Organisms → cellular organisms → Bacteria	2439	Open in IMG/M
3300005332\|Ga0066388_102395379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300005332\|Ga0066388_106825763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005434\|Ga0070709_10013857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4545	Open in IMG/M
3300005435\|Ga0070714_100122970	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300005435\|Ga0070714_100248980	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005436\|Ga0070713_101026949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	796	Open in IMG/M
3300005437\|Ga0070710_10008540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4987	Open in IMG/M
3300005439\|Ga0070711_100112700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1999	Open in IMG/M
3300005445\|Ga0070708_100022157	All Organisms → cellular organisms → Bacteria	5384	Open in IMG/M
3300005468\|Ga0070707_100025240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5636	Open in IMG/M
3300005471\|Ga0070698_100112152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2692	Open in IMG/M
3300005533\|Ga0070734_10007890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8424	Open in IMG/M
3300005536\|Ga0070697_100048955	All Organisms → cellular organisms → Bacteria	3428	Open in IMG/M
3300005764\|Ga0066903_101655558	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300005764\|Ga0066903_103507996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	845	Open in IMG/M
3300005764\|Ga0066903_103942771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	796	Open in IMG/M
3300006028\|Ga0070717_10978493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	770	Open in IMG/M
3300006059\|Ga0075017_100224705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1365	Open in IMG/M
3300006102\|Ga0075015_100381607	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300006173\|Ga0070716_100258319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1191	Open in IMG/M
3300006173\|Ga0070716_100591193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	833	Open in IMG/M
3300006175\|Ga0070712_100051219	All Organisms → cellular organisms → Bacteria	2875	Open in IMG/M
3300006175\|Ga0070712_100142209	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300006804\|Ga0079221_10218504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1058	Open in IMG/M
3300006806\|Ga0079220_10349588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300006806\|Ga0079220_10707948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	742	Open in IMG/M
3300006914\|Ga0075436_101468115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300009137\|Ga0066709_100060212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4371	Open in IMG/M
3300010047\|Ga0126382_10297513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1210	Open in IMG/M
3300010048\|Ga0126373_12631750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300010303\|Ga0134082_10451563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300010358\|Ga0126370_11210337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	703	Open in IMG/M
3300010360\|Ga0126372_10368414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1297	Open in IMG/M
3300010360\|Ga0126372_12693673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300010360\|Ga0126372_12839795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300010361\|Ga0126378_10331226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1630	Open in IMG/M
3300010361\|Ga0126378_10442249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1414	Open in IMG/M
3300010361\|Ga0126378_12778190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	559	Open in IMG/M
3300010366\|Ga0126379_11944803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	691	Open in IMG/M
3300010366\|Ga0126379_12522934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300010371\|Ga0134125_10010219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus ruber	10547	Open in IMG/M
3300010371\|Ga0134125_10101194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3209	Open in IMG/M
3300010376\|Ga0126381_103325603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300010376\|Ga0126381_104068359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	568	Open in IMG/M
3300010376\|Ga0126381_104329620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300010398\|Ga0126383_10290771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1626	Open in IMG/M
3300010398\|Ga0126383_13209649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	534	Open in IMG/M
3300010937\|Ga0137776_1769544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1031	Open in IMG/M
3300010937\|Ga0137776_1782023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300012198\|Ga0137364_10018117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4260	Open in IMG/M
3300012208\|Ga0137376_10539837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1011	Open in IMG/M
3300012971\|Ga0126369_12075164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300014150\|Ga0134081_10154953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	755	Open in IMG/M
3300016270\|Ga0182036_10460735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1001	Open in IMG/M
3300016319\|Ga0182033_10200643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1586	Open in IMG/M
3300016371\|Ga0182034_10329241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1234	Open in IMG/M
3300016422\|Ga0182039_10931519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300017932\|Ga0187814_10170536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300017942\|Ga0187808_10375733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	647	Open in IMG/M
3300017943\|Ga0187819_10415761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300018001\|Ga0187815_10065615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1526	Open in IMG/M
3300018001\|Ga0187815_10412722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300018431\|Ga0066655_10079840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1779	Open in IMG/M
3300021401\|Ga0210393_10612258	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300021478\|Ga0210402_11044791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300021560\|Ga0126371_10195778	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300021560\|Ga0126371_10835235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1067	Open in IMG/M
3300021560\|Ga0126371_11153998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300021560\|Ga0126371_12603209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300022528\|Ga0242669_1049538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300025898\|Ga0207692_10651095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	681	Open in IMG/M
3300025906\|Ga0207699_10014984	All Organisms → cellular organisms → Bacteria	4015	Open in IMG/M
3300025915\|Ga0207693_10029011	All Organisms → cellular organisms → Bacteria	4373	Open in IMG/M
3300025922\|Ga0207646_10034004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4607	Open in IMG/M
3300025928\|Ga0207700_10373133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1246	Open in IMG/M
3300025928\|Ga0207700_11528133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300027765\|Ga0209073_10298401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300027765\|Ga0209073_10361059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300027826\|Ga0209060_10048656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2052	Open in IMG/M
3300031231\|Ga0170824_106512460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300031543\|Ga0318516_10004264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6314	Open in IMG/M
3300031544\|Ga0318534_10635965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300031640\|Ga0318555_10814754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300031668\|Ga0318542_10014274	All Organisms → cellular organisms → Bacteria	3110	Open in IMG/M
3300031718\|Ga0307474_11132846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300031719\|Ga0306917_10054763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2699	Open in IMG/M
3300031748\|Ga0318492_10064745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1738	Open in IMG/M
3300031768\|Ga0318509_10426408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	741	Open in IMG/M
3300031779\|Ga0318566_10533215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	574	Open in IMG/M
3300031792\|Ga0318529_10206280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	912	Open in IMG/M
3300031845\|Ga0318511_10035746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1926	Open in IMG/M
3300031860\|Ga0318495_10036840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2147	Open in IMG/M
3300031894\|Ga0318522_10147276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	886	Open in IMG/M
3300031897\|Ga0318520_10828888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300031945\|Ga0310913_10350147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M
3300031959\|Ga0318530_10331072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300031981\|Ga0318531_10182822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	943	Open in IMG/M
3300032009\|Ga0318563_10526060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	639	Open in IMG/M
3300032035\|Ga0310911_10187912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1172	Open in IMG/M
3300032039\|Ga0318559_10265422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300032066\|Ga0318514_10372620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
3300032067\|Ga0318524_10642415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	559	Open in IMG/M
3300032076\|Ga0306924_11553187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	700	Open in IMG/M
3300032076\|Ga0306924_11876607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	622	Open in IMG/M
3300032174\|Ga0307470_11355983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300032180\|Ga0307471_100605377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	1255	Open in IMG/M
3300032261\|Ga0306920_102450112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura barringtoniae	719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.30%
Aquatic	Environmental → Aquatic	7.83%
Plants	Host-Associated → Plants	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.30%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.74%
Sediment	Environmental → Aquatic → Sediment	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.09%
Loam	Environmental → Terrestrial → Soil → Loam	25.22%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	1.74%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.09%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	1.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_101356692	3300004633	Tropical Forest Soil	VTATSQPGHGWTVVLRRMLIRIVAGHQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYTRHVAAHDGVQPVFS*
Ga0066673_103041252	3300005175	Soil	MTGGGLPGHGWTVVLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAAAAAYSRHVAGHPAARPVFT*
Ga0066684_109632252	3300005179	Soil	MTGGGLPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAAAAYSRHVAGHPAARPVFT*
Ga0066388_1002424283	3300005332	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGQQEGGFTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYTRHVAGHDGVQPVFS*
Ga0066388_1023953791	3300005332	Tropical Forest Soil	GQAGLGWTVVLRRMPTRIVAGRPEGGYTDAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYQPIVDGVAAYEAHVELHSTGARPQLSGGDPALSVY*
Ga0066388_1068257632	3300005332	Tropical Forest Soil	APGARVTATSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDGARPVFS*
Ga0070709_100138575	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTGGAPPGHGWTVVLRRMPLRIVAGHQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS*
Ga0070714_1001229703	3300005435	Agricultural Soil	MTGGASPGHGWTVVLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDMDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS*
Ga0070714_1002489802	3300005435	Agricultural Soil	MTAVAGQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPINAGAAAYTRHVAGHHGARPVFS*
Ga0070713_1010269492	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLRRMPIRIVAGQQEGGYTDAFEIICCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYSRHVAGHGARPVCSQSGALSPGGG*
Ga0070710_100085402	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTGGAPPGHGWTVVLRRMPLRIVAGRQEGGYTDAFEVVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS*
Ga0070711_1001127002	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTGGAPPGHGWTVVLRRMPLRIVAGRQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS*
Ga0070708_1000221577	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RMTGGASPGHGWTVVLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDRDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS*
Ga0070707_1000252404	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDRDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS*
Ga0070698_1001121522	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDMDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS*
Ga0070734_100078908	3300005533	Surface Soil	MTAAAQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEVVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYARHVAGHQGARPVFS*
Ga0070697_1000489552	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPIRIVAGRQEGGYTDAFEIVCCDCGDDPDMDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS*
Ga0066903_1016555582	3300005764	Tropical Forest Soil	MTASDEPGHGWTVVLRRMPIRIVAGEQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPLKAGAAAYSRHVAGHDDVQPVFS*
Ga0066903_1035079962	3300005764	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHTGARPVLS*
Ga0066903_1039427712	3300005764	Tropical Forest Soil	VTAISQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHGARAVYS*
Ga0070717_109784932	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTAVAGQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVARHHGARPVFS*
Ga0075017_1002247053	3300006059	Watersheds	MTAPSQPGHAWASQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHNGARPVFS*
Ga0075015_1003816072	3300006102	Watersheds	MTAPSQPGHAWASQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYARHVAGHDGARPVFS*
Ga0070716_1002583191	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTGGASPGHGWTVVLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDMDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS*
Ga0070716_1005911932	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTGGAPPGHGWTVVLRRMPLRIVAGRQEGGYIDAFEVVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS*
Ga0070712_1000512191	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RGEAGRPPGGRMTGGASPGHGWTVVLRRMPTRIVAGRQEGGYTDAFEIVCCDCGDDPDMDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS*
Ga0070712_1001422092	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTGGASPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPINAGAAAYTRHVAGHHGARPVFS*
Ga0079221_102185042	3300006804	Agricultural Soil	MTAAGRPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYSRHVAAHRGARPVFS*
Ga0079220_103495882	3300006806	Agricultural Soil	MTGGGRPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYHPIKAGAAAYTRHVAGHGRARPVFS*
Ga0079220_107079482	3300006806	Agricultural Soil	MTADDRPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEVVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS*
Ga0075436_1014681152	3300006914	Populus Rhizosphere	VTADDRPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDGARPVFS*
Ga0066709_1000602122	3300009137	Grasslands Soil	MPIRIVAGRQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAAAAAYSRHVAGHPAARPVFT*
Ga0126380_100730932	3300010043	Tropical Forest Soil	MTASGQAGLGWTVVLRRMPTRIVAGRPEGGYTDAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYQPIVDGVAAYEAHVELHSTGARPQLSGGDPALSVY*
Ga0126384_116798812	3300010046	Tropical Forest Soil	MTANGQAGLGWTVVLRRMPTRIVAGRPEGGYTDAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYQPIVDGVAAYEAHVELHSTGARPQLSGGDPALSVY*
Ga0126382_102975132	3300010047	Tropical Forest Soil	MTANGQAGLGWTVVLRRMPTRIVAGRPEGGYTEAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYQPIVDGVAAYEAHVELHSTGARPQLS
Ga0126373_120733172	3300010048	Tropical Forest Soil	MTANGQAGLGWTVVLRRMPTRIVAGRPEGGYTDAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYQPIVDGVAAYEAHVELHSTTARPQLSGGDPALSVY*
Ga0126373_124096902	3300010048	Tropical Forest Soil	MTANGQDGLGWTVVLRRMPTRIVAGRPEGGYTDAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYQPIVDGVAAYEAHVELHSTGARPQLSRG*
Ga0126373_126317501	3300010048	Tropical Forest Soil	QPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDMDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDGVQPVFS*
Ga0134082_104515632	3300010303	Grasslands Soil	PIRIVAGRQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAAAAAYSRHVAGHPAARPVFT*
Ga0126370_112103371	3300010358	Tropical Forest Soil	VTPTSQPGHGWTVVLRRMPIRIVAGQQEGGFTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYSRHVAGHDRVQPVFS*
Ga0126372_103684142	3300010360	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGQQEGGVTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYTRHVAGHDGVQPVFS*
Ga0126372_126936731	3300010360	Tropical Forest Soil	MTADDRPGHGWTVVLRRMPIRIVAGQQQGGYTDAFEIVCCDCGDDPDLDYRDVCADLQRVRGPYTLVAGIAAYGRHVRLQHRPQPIPAGDQTL*
Ga0126372_128397952	3300010360	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDGARPVFS*
Ga0126378_103312261	3300010361	Tropical Forest Soil	MPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYTRHVAGHGGVRPVFS*
Ga0126378_104422493	3300010361	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGHQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYTRHVAAHDGVQPVFS*
Ga0126378_127781901	3300010361	Tropical Forest Soil	VTADDQVGHGWTVVLRRMPIRIVAGQQQGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPMRAGAAAYAKHVAAHSGAQPVF
Ga0126379_119448031	3300010366	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDG
Ga0126379_125229342	3300010366	Tropical Forest Soil	VTADDQVGHGWTVVLRRMPIRIVAGQQQGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPMRAGAAAYAKHVAAHSGAQPVFS*
Ga0134125_100102191	3300010371	Terrestrial Soil	MTGGAPPGHGWTVVLRRMPLRIVAGRQEGGYTDAFEVVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAAHDG
Ga0134125_101011944	3300010371	Terrestrial Soil	GWTVVLRRMPLRIVAGRQEGGYIDAFEVVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS*
Ga0126381_1033256032	3300010376	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGEQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDGAERVLS*
Ga0126381_1040683592	3300010376	Tropical Forest Soil	VTAISQPGHGWTVVLRRMPIRIVAGEQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTR
Ga0126381_1043296202	3300010376	Tropical Forest Soil	VTATGQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDGARPVFS*
Ga0126383_102907712	3300010398	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGHQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYTR
Ga0126383_132096492	3300010398	Tropical Forest Soil	VTAISQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAA
Ga0137776_17695442	3300010937	Sediment	MPARMVAGRPEGGYTNAFEVVCRACGDDPYLDYRDVSAELQRIRGPYQPIAAGAAAYEEHVALHSNGGYQCRRSPAVR*
Ga0137776_17820231	3300010937	Sediment	HGWTVVLRRMPIRIVAGQQEGGYTDAFEVVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGTAAYARHVAGHQGARPVFS*
Ga0137364_100181174	3300012198	Vadose Zone Soil	MTGGRLPGHGWTVVLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAAAAAYTRHVAGHPAARPVFT*
Ga0137376_105398372	3300012208	Vadose Zone Soil	MTGGGLPGHGWTVVLRRMPIRIVMGRQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAAAAAYTRHVAGHPAARPVFT*
Ga0126369_120751642	3300012971	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYTRHVAGHDGVQPVFS*
Ga0134081_101549532	3300014150	Grasslands Soil	MTGGGLPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAAAAAYSRHVAGHPAARPVFT*
Ga0182036_104607352	3300016270	Soil	VTAASQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0182033_102006432	3300016319	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFGIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0182034_103292412	3300016371	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHPGARPVLS
Ga0182039_109315191	3300016422	Soil	SQPGHGWTVVLRRMPIRMVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHAGAERVLS
Ga0187814_101705362	3300017932	Freshwater Sediment	MTTANQSLPGWTVVLRRMLARIAAGQPEGGYSNAFEVVCCDCGDDPDLAYHGVSPELQQIRGPYQPIAAGIAACEQHIALCHHSARPSARSG
Ga0187808_103757331	3300017942	Freshwater Sediment	MTTCDQPGGGRIVILRRRPARIAEGQPQGGYTDAFEIVCCCCGDHPYLDYREVSPELQLIRGCYPIAEGVAAYE
Ga0187819_104157611	3300017943	Freshwater Sediment	VPGMTTANQSLPGWTVVLRRMPARIVAGQPEGGYSNAFEIVCCDCDPDLDYHDVSPELQQIREPYQPIAVGIAACEEHIALCHHSARPSARSGQS
Ga0187815_100656151	3300018001	Freshwater Sediment	MTTANQSLPGWTVVLRRVPARMVAGQLEGGYSNAFEIVCCDSGDDPDLDYHDVSPEFQQIRGPYQPIVAGIAAYEEHIALCHHS
Ga0187815_104127222	3300018001	Freshwater Sediment	SLPGWTVVLRRMPARIVAGQPEGGYSNAFEIVCCDCDPDLDYHDVSPELQQIREPYQPIAVGIAACEEHIALCHHSARPSARSGQS
Ga0066655_100798402	3300018431	Grasslands Soil	MTGGGLPGHGWTVVLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAAAAAYSRHVAGHPAARPVFT
Ga0210393_106122582	3300021401	Soil	MTATSQPGHAWPSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYARHVAGHDGARPVFS
Ga0210402_110447912	3300021478	Soil	AGMTAPSQPGHARASQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYARHVAGHNGARPVFS
Ga0126371_101957783	3300021560	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGHQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYTRHVAAHDGVQPVFS
Ga0126371_108352352	3300021560	Tropical Forest Soil	VTATSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYSRHVAGHDRVQPVFS
Ga0126371_111539982	3300021560	Tropical Forest Soil	QAGLGWTVVLRRMPTRIVAGRPEGGYTDAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYQPIVDGVAAYEAHVELHSTGARPQLSGGDPALSAR
Ga0126371_126032091	3300021560	Tropical Forest Soil	VTADDQVGHGWTVVLRRMPIRIVAGQQQGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPMRAGAAAYAKHVAAHSGAQPVFS
Ga0242669_10495381	3300022528	Soil	VTAGDQSGLNWTMVLRRRPARVVAGRPQGGYTDAFEIVCCDCGDHPDLDYRDVSAELQRIRGPYPIVAGVAAYEEHARSHR
Ga0207692_106510952	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTATSQTSHAWAGEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIICCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYSRHVAGHGARPVCSQSGALSPGGG
Ga0207699_100149841	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GRMTGGAPPGHGWTVVLRRMPLRIVAGHQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS
Ga0207693_100290115	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GEADRPPGGRVTGGASPGHGWTVVLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDMDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS
Ga0207646_100340043	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPIRIVAGRQEGGYTDAFEIVCCDCGDDPDRDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS
Ga0207700_103731332	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTGGASPGHGWTVVLRRMPIRIVAGRQEGGYTDAFEIVCCDCGDDPDMDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS
Ga0207700_115281332	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GQAGRPPGASMTATSQTSHGWAGEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIICCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYSRHVAGHGARPVCSQSGALSPGGG
Ga0209073_102984012	3300027765	Agricultural Soil	MTGGGRPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYRDVSPELQRIRGPYHPIKAGAAAYTRHVAGHGRARPVFS
Ga0209073_103610592	3300027765	Agricultural Soil	MTADDRPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEVVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS
Ga0209060_100486563	3300027826	Surface Soil	MTAAAQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEVVCCDCGDDPDLDYREVSPELQRIRGPYHPIKAGAAAYARHVAGHQGARPVFS
Ga0170824_1065124602	3300031231	Forest Soil	GRPPGAGVTAASQPGHARASQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYARHVAGHGGAQPVFS
Ga0318516_100042642	3300031543	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0318534_106359652	3300031544	Soil	VTAISQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHPGARPVLS
Ga0318555_108147541	3300031640	Soil	TVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHPGARPVLS
Ga0318542_100142742	3300031668	Soil	MTVSDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0307474_111328462	3300031718	Hardwood Forest Soil	MTATSQPGHAWASQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYARHVAGHDGARPVFS
Ga0306917_100547632	3300031719	Soil	VTAISQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0318492_100647452	3300031748	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAGHVGAERVPS
Ga0318509_104264082	3300031768	Soil	VTAISQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAGHDGAERVLS
Ga0318566_105332152	3300031779	Soil	VTAISQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAG
Ga0318529_102062801	3300031792	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVG
Ga0318511_100357462	3300031845	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAER
Ga0318495_100368402	3300031860	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHAGAERVLS
Ga0318522_101472761	3300031894	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAA
Ga0318520_108288882	3300031897	Soil	PGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQQIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0310913_103501473	3300031945	Soil	GACMTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0318530_103310722	3300031959	Soil	GHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0318531_101828222	3300031981	Soil	MTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHDGAERVLS
Ga0318563_105260601	3300032009	Soil	VTTTSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHAGAERVLS
Ga0310911_101879123	3300032035	Soil	VGGWQVRSQASRPPGACMTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0318559_102654222	3300032039	Soil	LLAVERGRGQGANAPGARVTAISQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0318514_103726201	3300032066	Soil	RRAVRPVGGWQVRSQAGRPPGACMTVGDEPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTKHVAGHVGAERVPS
Ga0318524_106424152	3300032067	Soil	VTAIGQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAY
Ga0306924_115531872	3300032076	Soil	VTATGQSGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPITAGAAAYTRHVAGHPGARPVLS
Ga0306924_118766072	3300032076	Soil	VTAISQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVA
Ga0307470_113559832	3300032174	Hardwood Forest Soil	MPLRIVAGRQEVGYTDAFEIVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAAAYTRHVAAHDGARPVFS
Ga0307471_1006053772	3300032180	Hardwood Forest Soil	MTGGASPGHGWTVVLRRMPLRIVAGRQEGGYTDAFEIVCCDCGDDPDLDYREVSPELQRIRGPYHPMRAGAAAYARHVAAHSGARPVFS
Ga0306920_1024501121	3300032261	Soil	VTTTSQPGHGWTVVLRRMPIRIVAGQQEGGYTDAFEVVCCDCGDDPDLDYREVSAELQRIRGPYHPITAGAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080417

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences