NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F080394

Metagenome / Metatranscriptome Family F080394

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F080394
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 62 residues
Representative Sequence MSPLTVRRYRAERMLRQEFEGLRGRVLGTVRGRLRASGVNLDASDLEACYAQAWQGLY
Number of Associated Samples 99
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 22.61 %
% of genes near scaffold ends (potentially truncated) 96.52 %
% of genes from short scaffolds (< 2000 bps) 93.91 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (64.348 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa
(20.870 % of family members)
Environment Ontology (ENVO) Unclassified
(19.130 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(47.826 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 56.98%    β-sheet: 0.00%    Coil/Unstructured: 43.02%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.124.1.5: IF2B-liked2a0ua12a0u0.74754
a.128.1.0: automated matchesd7bzba27bzb0.73878
a.264.1.1: Duffy binding domaind1zroa21zro0.73842
d.180.1.1: Conserved core of transcriptional regulatory protein vp16d16vpa_16vp0.73516
d.110.6.4: Histidine kinase family 1 (HK1) sensor domainsd3c8ca13c8c0.72863


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF03808Glyco_tran_WecG 18.26
PF16363GDP_Man_Dehyd 11.30
PF00378ECH_1 3.48
PF01370Epimerase 2.61
PF03721UDPG_MGDP_dh_N 1.74
PF12680SnoaL_2 1.74
PF08241Methyltransf_11 0.87
PF00106adh_short 0.87
PF12697Abhydrolase_6 0.87
PF13302Acetyltransf_3 0.87
PF13489Methyltransf_23 0.87
PF08281Sigma70_r4_2 0.87
PF01810LysE 0.87
PF01345DUF11 0.87
PF00415RCC1 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG1922UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF familyCell wall/membrane/envelope biogenesis [M] 18.26
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 1.74
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.74
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 1.74
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 1.74
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 1.74
COG5184Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteinsCell cycle control, cell division, chromosome partitioning [D] 1.74


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.35 %
UnclassifiedrootN/A35.65 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001411|JGI20182J14882_104317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium503Open in IMG/M
3300004080|Ga0062385_11111959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium536Open in IMG/M
3300004152|Ga0062386_100729308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria814Open in IMG/M
3300004152|Ga0062386_101499614All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales562Open in IMG/M
3300004635|Ga0062388_100417993Not Available1171Open in IMG/M
3300005332|Ga0066388_106685482All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300005435|Ga0070714_101494950All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300005536|Ga0070697_100888836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales790Open in IMG/M
3300005541|Ga0070733_10357284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales969Open in IMG/M
3300005576|Ga0066708_10867039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales564Open in IMG/M
3300005598|Ga0066706_10901757All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium689Open in IMG/M
3300005764|Ga0066903_102444013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter1011Open in IMG/M
3300005764|Ga0066903_108138996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082537Open in IMG/M
3300006059|Ga0075017_100608395All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium836Open in IMG/M
3300006102|Ga0075015_100796567All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300006173|Ga0070716_100821280All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales721Open in IMG/M
3300006175|Ga0070712_101182266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium665Open in IMG/M
3300006176|Ga0070765_101472024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter641Open in IMG/M
3300006795|Ga0075520_1047294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium2076Open in IMG/M
3300009012|Ga0066710_101250781Not Available1151Open in IMG/M
3300009029|Ga0066793_10134619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1441Open in IMG/M
3300009524|Ga0116225_1281468Not Available744Open in IMG/M
3300009551|Ga0105238_11729078Not Available657Open in IMG/M
3300009839|Ga0116223_10174677All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1324Open in IMG/M
3300010373|Ga0134128_11710115All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300010376|Ga0126381_103499043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium617Open in IMG/M
3300010379|Ga0136449_100327656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD00592770Open in IMG/M
3300010379|Ga0136449_101916388Not Available880Open in IMG/M
3300010379|Ga0136449_104540369Not Available510Open in IMG/M
3300010867|Ga0126347_1258051All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria704Open in IMG/M
3300010880|Ga0126350_10477901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium510Open in IMG/M
3300012200|Ga0137382_11171044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium547Open in IMG/M
3300012356|Ga0137371_10814798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium711Open in IMG/M
3300012960|Ga0164301_11770353Not Available518Open in IMG/M
3300014156|Ga0181518_10223447Not Available968Open in IMG/M
3300014158|Ga0181521_10384803Not Available695Open in IMG/M
3300014164|Ga0181532_10152662Not Available1387Open in IMG/M
3300014169|Ga0181531_10079675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1938Open in IMG/M
3300014501|Ga0182024_12483270Not Available559Open in IMG/M
3300014502|Ga0182021_11196482Not Available916Open in IMG/M
3300015086|Ga0167655_1006072All Organisms → cellular organisms → Bacteria → Terrabacteria group2580Open in IMG/M
3300015089|Ga0167643_1003260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2144Open in IMG/M
3300015171|Ga0167648_1029285All Organisms → cellular organisms → Bacteria1322Open in IMG/M
3300016319|Ga0182033_10226289All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1505Open in IMG/M
3300018016|Ga0187880_1211411Not Available874Open in IMG/M
3300018017|Ga0187872_10341308Not Available645Open in IMG/M
3300018058|Ga0187766_10644809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium727Open in IMG/M
3300018060|Ga0187765_10810305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria625Open in IMG/M
3300018468|Ga0066662_11624961Not Available675Open in IMG/M
3300018468|Ga0066662_12032594Not Available602Open in IMG/M
3300020150|Ga0187768_1114231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium618Open in IMG/M
3300022850|Ga0224552_1016467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter1009Open in IMG/M
3300025604|Ga0207930_1034860Not Available1327Open in IMG/M
3300025619|Ga0207926_1081520Not Available819Open in IMG/M
3300025898|Ga0207692_10723747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium647Open in IMG/M
3300027568|Ga0208042_1036386Not Available1266Open in IMG/M
3300027696|Ga0208696_1229991All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300027701|Ga0209447_10176864Not Available585Open in IMG/M
3300027729|Ga0209248_10124798Not Available772Open in IMG/M
3300027812|Ga0209656_10031774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3123Open in IMG/M
3300027905|Ga0209415_10991626Not Available560Open in IMG/M
3300028047|Ga0209526_10523719Not Available769Open in IMG/M
3300028654|Ga0265322_10040481Not Available1327Open in IMG/M
3300028759|Ga0302224_10290549All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium656Open in IMG/M
3300028808|Ga0302228_10215287Not Available872Open in IMG/M
3300028877|Ga0302235_10147635Not Available1050Open in IMG/M
3300028877|Ga0302235_10348119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium638Open in IMG/M
3300028906|Ga0308309_11128800Not Available677Open in IMG/M
3300029999|Ga0311339_11742441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria544Open in IMG/M
3300030007|Ga0311338_10250666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1991Open in IMG/M
3300030007|Ga0311338_10487665Not Available1296Open in IMG/M
3300030057|Ga0302176_10356365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium589Open in IMG/M
3300030490|Ga0302184_10098927Not Available1323Open in IMG/M
3300030490|Ga0302184_10301693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium643Open in IMG/M
3300030494|Ga0310037_10250640All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300030503|Ga0311370_10574842Not Available1358Open in IMG/M
3300030503|Ga0311370_11894155Not Available601Open in IMG/M
3300030523|Ga0272436_1179565Not Available579Open in IMG/M
3300030524|Ga0311357_10573301Not Available1041Open in IMG/M
3300030580|Ga0311355_11135731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei694Open in IMG/M
3300030617|Ga0311356_11796097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium546Open in IMG/M
3300030739|Ga0302311_10265195All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300030906|Ga0302314_10875801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium886Open in IMG/M
3300031234|Ga0302325_10383220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2205Open in IMG/M
3300031234|Ga0302325_12066918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300031234|Ga0302325_12172736All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium677Open in IMG/M
3300031236|Ga0302324_100444005All Organisms → cellular organisms → Bacteria1916Open in IMG/M
3300031236|Ga0302324_100982233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1150Open in IMG/M
3300031525|Ga0302326_11541168Not Available887Open in IMG/M
3300031525|Ga0302326_13462387Not Available525Open in IMG/M
3300031544|Ga0318534_10034852All Organisms → cellular organisms → Bacteria2766Open in IMG/M
3300031670|Ga0307374_10249162Not Available1191Open in IMG/M
3300031671|Ga0307372_10521027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium558Open in IMG/M
3300031672|Ga0307373_10433412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium745Open in IMG/M
3300031708|Ga0310686_107509758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium533Open in IMG/M
3300031708|Ga0310686_119450916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium568Open in IMG/M
3300031713|Ga0318496_10284604All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium912Open in IMG/M
3300031748|Ga0318492_10613453All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium581Open in IMG/M
3300031751|Ga0318494_10071436All Organisms → cellular organisms → Bacteria1870Open in IMG/M
3300031764|Ga0318535_10449535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium574Open in IMG/M
3300031769|Ga0318526_10155573Not Available930Open in IMG/M
3300031781|Ga0318547_11010909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium520Open in IMG/M
3300031788|Ga0302319_11887103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium512Open in IMG/M
3300031819|Ga0318568_10206830All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1211Open in IMG/M
3300031819|Ga0318568_10218839Not Available1176Open in IMG/M
3300031860|Ga0318495_10299754Not Available716Open in IMG/M
3300031860|Ga0318495_10492066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300031890|Ga0306925_12014126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium544Open in IMG/M
3300031896|Ga0318551_10346492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium840Open in IMG/M
3300031962|Ga0307479_10568045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium1117Open in IMG/M
3300032064|Ga0318510_10155866Not Available904Open in IMG/M
3300032805|Ga0335078_10372061All Organisms → cellular organisms → Bacteria1889Open in IMG/M
3300033134|Ga0335073_10865428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria958Open in IMG/M
3300033290|Ga0318519_10651440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales642Open in IMG/M
3300034282|Ga0370492_0361635Not Available589Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa20.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil12.17%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.83%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil6.09%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.48%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil3.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.61%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil2.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.61%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.61%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.74%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.74%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.74%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.74%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.87%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.87%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.87%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.87%
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen0.87%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.87%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.87%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.87%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.87%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.87%
RockEnvironmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock0.87%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.87%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001411Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300014156Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015086Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5c, rocky medial moraine)EnvironmentalOpen in IMG/M
3300015089Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))EnvironmentalOpen in IMG/M
3300015171Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300018016Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020150Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MGEnvironmentalOpen in IMG/M
3300022850Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 1-5EnvironmentalOpen in IMG/M
3300025604Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028654Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaGHost-AssociatedOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300028877Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030490Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030523Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak white sandstoneEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030580II_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030739Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3EnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031670Soil microbial communities from Risofladan, Vaasa, Finland - OX-3EnvironmentalOpen in IMG/M
3300031671Soil microbial communities from Risofladan, Vaasa, Finland - OX-1EnvironmentalOpen in IMG/M
3300031672Soil microbial communities from Risofladan, Vaasa, Finland - OX-2EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI20182J14882_10431723300001411Arctic Peat SoilMSPLTVRRFRAERLLRGEFEALRGRVLAAVRARLRGSGVTLDQSDLEACYASAWQGLYAAVLD
Ga0062385_1111195913300004080Bog Forest SoilMAEFALPVGLHNLLGVSPLSLRRHRAERLLRQEFEGLRGRVLTGVRARLRASGVTLDLLDLEACYAMAWQGLYAAVMEG
Ga0062386_10072930823300004152Bog Forest SoilMSRLTLRRYRAERLLRQEFEGLRGRVIATVRGRLGARGARLDRSDLDACYAQAWQ
Ga0062386_10149961423300004152Bog Forest SoilMSPLTLRRFRAERLLRQQFEELRGRVLATVRGRLGASGAGLDASDLDACYAQAWQGLYAAVLEG
Ga0062388_10041799323300004635Bog Forest SoilMAEFALPVGLHNLLGVSPLSLRRHRAERLLRQEFEGLRGRVLTGVRARLRASGVTLDLLDLEACYAMAWQGLYAAVMEGQEIA
Ga0066388_10668548213300005332Tropical Forest SoilMSPLSLRRFRAERLLREEFNRLRSAVLATVRARLRWSGVSLDRSDLDACYAQAWQGLYAAVLD
Ga0070714_10149495013300005435Agricultural SoilMSPYRLRRFRAERLLRQEFSSVRSRVLAAARARLRAHGITLDESDLEACYAQAWQGLYAVLLEGSQVANLTAWL
Ga0070697_10088883623300005536Corn, Switchgrass And Miscanthus RhizosphereMSPASLRRYRAERLLREEFRSLRADVIASARASLRACGAGLDDSDLDACYGQAWQGLYAATLEGRRILNPT
Ga0070733_1035728423300005541Surface SoilMSPSTLRRYRAERLLRQGFDGLREEVLRSVRGRLRARGVHLDSGDLEACYAQA
Ga0066708_1086703913300005576SoilMSPLSLRRYRAERLMRQEFEALRGRLLERVRARLRTSGMSLDPADLDACYAQAWQGLYTALLEGG
Ga0066706_1090175723300005598SoilMSPASLRRYRAERLLREEFRSLRAGVIASARASLRTCGARLDDGDLEACYAQA*
Ga0066903_10244401323300005764Tropical Forest SoilMSPLGVRRYRAERALRQDFERLRARVLVRVGARLRARGVLLDGTDLDACYANAWQGLYGVLLEGGEVQNPAAWLVVVT
Ga0066903_10813899613300005764Tropical Forest SoilMSPPALRRYRAERLLRLQFEGLRGRVIATAGGRLRASGVMLDACDLEACYAQAWQGLYMAVLEGQE
Ga0075017_10060839513300006059WatershedsMSPLALRRYRAERLLREEFESLRGRVLATAAGRLRASGVRLDASDLEACYA
Ga0075015_10079656713300006102WatershedsMSPLDVRRYRAERLLRAEFEALRARVLATVRHRLASSGVTLDACDLDACYSQAWQGLY
Ga0070716_10082128013300006173Corn, Switchgrass And Miscanthus RhizosphereMSPLSVRRYRADRLLRREFDAMRARVLASVRGRLRSNGAVLDPADLEACYSQAWSGLYTTMLQGQVEVANP
Ga0070712_10118226623300006175Corn, Switchgrass And Miscanthus RhizosphereMSMSPLAIRRFRAERLLRHEFEALRGRVLAKVRGRLRASGVRLDHADLDACY
Ga0070765_10147202423300006176SoilMSPLPLRRYRAERLLREEFAGRREEVLAVVRSRLRAQGVRLDLGDLEGCYAQAWQGL
Ga0075520_104729413300006795Arctic Peat SoilMSPFVVRRYRAERLLRDEFEGLRKRVIGGVSQRLRAVGARLDASDLDACYS
Ga0066710_10125078123300009012Grasslands SoilMSPYRLRRFRAERLLRQEFSSMRSRVLAAARARLRARGITLDESDLEACYAQAWQGLYVLLLEGSQIANLTGWL
Ga0066793_1013461923300009029Prmafrost SoilMSPLNVRRYRAERLLRRDFEALRGRVIATARRRLLVSGVTLDPCDLEACYSQAFRSNVNNAR*
Ga0116225_128146813300009524Peatlands SoilMSPLSLRRYRAERLLRHEFEALRGEVLARVRRKLRAIGLGLDQGDLEA
Ga0105238_1172907813300009551Corn RhizosphereLVRRYRAERLLRDEFEGLRQKVLAAVAGRLRACGIRLDAGDLD
Ga0116223_1017467723300009839Peatlands SoilMSPLSLRRHRAERLLREEFEGLRGRVLASVRGRLRASGVSLDQDDLEACYAMAWQGLY
Ga0134128_1171011523300010373Terrestrial SoilMSPLSLRRYRAERLLREDFEALRARVLAAVRGLLATDALQLGRLDLDACYAAAWQALYAATVDG
Ga0126381_10349904313300010376Tropical Forest SoilMSPPALRRYRAERLIRHEFVGLRGRVIATARGMLHVNGVTLDPSDLEACYAQAWQGLYM
Ga0136449_10032765643300010379Peatlands SoilMSPLTLRRYRAERLLRAEFEGLRGRVIAAVRGRLGASGASLDPSDLEACYAQAWQGLYAA
Ga0136449_10191638823300010379Peatlands SoilMSPLTVRRYRAERLLREEFEGLRGRVLGTVRGRLRASGVSLDASDLEACY
Ga0136449_10454036923300010379Peatlands SoilMSPPSLRRHRAERLLREEFEALRGRVLASVSGRLRASGVRLDQGDLEACYAQAW
Ga0126347_125805123300010867Boreal Forest SoilMSPLLLRRYRADRLLREEFETLRERVIGCVGSRLRNAGASLDRSDLEAAYAQAWQGLHAAVLEG
Ga0126350_1047790113300010880Boreal Forest SoilMSPLTLRRFRAERLLRQQFQELRGQVLMTVRGRLAASGAGLDSSDLDGCYAQAWQGLYTAVLEGQEITN
Ga0137382_1117104413300012200Vadose Zone SoilMSPLSLRRYRAERLMRQEFEALRGRVLERVRARLRTSGMSLDPADLDACYAQAWQGLYTALLE
Ga0137371_1081479813300012356Vadose Zone SoilMSPASLRRYRAERLLREEFRALRACVLASARGSLRACGAELDESDLEACYAQAWQGLYAATLGGQRIVNP
Ga0164301_1177035323300012960SoilMSPLSLRRYRAERLLNEEFDRRRERVLASVGARLSSRGVALARADLEACYAQ
Ga0181518_1022344713300014156BogMSPLSLRRHRAERLLREEFEALRGRVLASVRGRLRASGVSLDQGDLEACYATAWQGLYA
Ga0181521_1038480323300014158BogMSPLSLRRHRAERLLREEFEALRGRVLASVRGRLRASGVSLDQGDLEACYATAWQGLYAAVL
Ga0181532_1015266213300014164BogMSPLTVRRYRAERMLRQEFEGLRGRVLGTVRGRLRTSGVSLDASDLEACYAQAWQGLYAAMLAGEEIANPTG
Ga0181531_1007967513300014169BogMSPLSLRRHRAERLLREEFEGLRERVLASVRGRLRANGASLDQDDLEACYATAWQGLYAA
Ga0182024_1248327023300014501PermafrostMSPLLVRRYRAELLMRKEFKAMSGKVLGVVRGRLRASGVSLDVSDLEACYA
Ga0182021_1119648213300014502FenMSPLTLRRYRAERLLRREFAGMQGRVLGVVAGRLRGCGVTPDDGDLEACYASAWQGL
Ga0167655_100607213300015086Glacier Forefield SoilMSPLLLRRYRADRLLREEFETLRARVIGGVEARLRGAGASLDRSDLEAAYAQAWQGLHAAVLEGRQIATPAAW
Ga0167643_100326033300015089Glacier Forefield SoilVSPPSLRRYRAERLLRKEFSALRSKVLAIVRSQLRAKGVTLDPADLEACYAQAWQGLYATVLDGD
Ga0167648_102928523300015171Glacier Forefield SoilMSPLLLRRYRAERLLRREFVGMQARVIHLVAGRLRGCGVSLDDSELEACYASAWQ
Ga0182033_1022628913300016319SoilVSPLSLRRYRAERLLREEFDRLRARVLRNVRARLGWSGVRLDASDLEACYAQAWQGLYAAVLGGERIAN
Ga0187880_121141113300018016PeatlandMSPLSLRRHRAERLLREEFEGLRGRVLASVRGRLRASGVSLDQGDLEACYAEAWQGLYAAVLEGQEIANP
Ga0187872_1034130813300018017PeatlandMSPLSLRRHRAERLLREEFEALRGRVLASVRGRLRASGVSLDQGDLEACYATAWQGLYAAVLEGQQIANPGGWLAV
Ga0187766_1064480913300018058Tropical PeatlandMSPPALRRYRAERLLREEFDGLRGRVIAAVQGMLRAKGVTLDPSDLEACYAQAWQGLYMALLEG
Ga0187765_1081030513300018060Tropical PeatlandMSPLTLRRYRAERMLREDFESLRSRVLASVAGRLRAAGVELDRGDLEACYASAWQGLYGAVLEGQEIESPFAWL
Ga0066662_1162496113300018468Grasslands SoilMSPLSLRRYRAERLLREEFRALRGNVLAAARARLRSLGVRLDPADLDCCYAQAWQG
Ga0066662_1203259413300018468Grasslands SoilMSPLPLRRYRAERLLKAQFEALRASVIARVRKRLATGGAAADAIDLEACYAAAWQGRY
Ga0187768_111423113300020150Tropical PeatlandMSPLALRRYRAERLLREEFEGLRSRVLAIVRGRLRASGASLDVGDLEACYAQAWQGLYMAVLDGH
Ga0224552_101646713300022850SoilMSPLSLRRYRAERLLRDEFEGLRERVLASVRGKLGTSGASLDQGDLEACYATAWQGL
Ga0207930_103486033300025604Arctic Peat SoilVSPLTLRRYRAERLLESQFKGLQAPVVANVARRLRGANVDLDACDLEACYAIAWQGLYA
Ga0207926_108152023300025619Arctic Peat SoilVSPLSLRRYRAERLLQHEFEALQGRVLAAAARRLRASGVRLDGCDLEACYAAAWQGLYMAVLDGQEIAN
Ga0207692_1072374713300025898Corn, Switchgrass And Miscanthus RhizosphereMSPYRLRRFRAERLLRQEFSSMRSRVLGAARARLRARGITLDESDLEACYAQAWQGLYTVMLEGSQIANL
Ga0208042_103638613300027568Peatlands SoilMSPLSVRRYRAERLLRREFEAMRGRVLAGVRGRLRAAGVSLDAADLEACYAQ
Ga0208696_122999123300027696Peatlands SoilMSPTTLRRYRAERLLRRDFERLRERILASVRANLGARGIVLDMADLEECYAQAWQGMYTALLEGQQL
Ga0209447_1017686423300027701Bog Forest SoilVSPLTVRRYRAERMLRKEFEGLRGRVLGTVRGRLRASGVSLDASDLDACYAQAWQGLYAAMLAGEEIANPTGWL
Ga0209248_1012479813300027729Bog Forest SoilMSPLTVRRYRAERMLRREFEGLRGRVLGTVRGRLRASGVSLDASDLDACYAQAWQGLYAAMLAGE
Ga0209656_1003177413300027812Bog Forest SoilMSPLPLRRYRAERLLQEQFEDLRGRVLASAQGRLAAGGVRLDRADLEACYGQ
Ga0209415_1099162613300027905Peatlands SoilVRRYRAERLLRQEFEAMRATVIASVRGRLRASGVTFDQGDLEACYAQ
Ga0209526_1052371923300028047Forest SoilMSPLALRRYRAERMLSREFEGLRESVIATTRSRLRARGVLLDAGELEACYSQAWQ
Ga0265322_1004048123300028654RhizosphereMSPLTVRRFRAERLLRGEFEALRGRVLAAVRARLKGSGVTLDRSDLEACYATAWQGLYAAVLDGQEIDNP
Ga0302224_1029054913300028759PalsaVSPSTLRRYRAERLLRQEFGGLREEVLRSVRGRLRVRGVHLDECDLEACYAQAWQGLYAAVAAGEEIANPGG
Ga0302228_1021528713300028808PalsaMSPLIVRRYRAERMLRQEFEGLRGRVLGTVRGRLRASGVSLDQSDLEACYAQAWQGLYA
Ga0302235_1014763513300028877PalsaMSPLIVRRYRAERMLRQEFEGLRGRVLGTVRGRLRASGVSLDQSDLEACYAQAWQGLYAA
Ga0302235_1034811923300028877PalsaMSPLTLRRYRADRLLRREFEGLRGRVLATVRGRLGAGGARLDSSDLDACYAQAWQGLYAAVLDG
Ga0308309_1112880013300028906SoilMSPLPLRRYRAERLLREEFAGRREEVLAVVRSRLRAQGVRLDLGDLEGCYAQAWQGLYAALLAGREVAN
Ga0311339_1174244123300029999PalsaMSPLTVRRYRAERLLRRDFQALSSTVLAAVKCKLGTATSALDQSDLEACYAAAWQGLYMA
Ga0311338_1025066623300030007PalsaMSPLTVRRYRAERMLRKEFEALRGRVLGTVRGRLRTSGVNLDASDLDACYAQAW
Ga0311338_1048766513300030007PalsaMSPLTVRRYRAERMLRKEFEGLRGRVMGTVRGRLRASGVSLDQCDLEACYAQAWQGLYAAMLEGQEIANPTG
Ga0302176_1035636513300030057PalsaMSPLTVRRYRAERMLRQEFEGLRGRVLGTVRGRLRASGVNLDASDLEACYAQAWQGLY
Ga0302184_1009892713300030490PalsaVSPLTVRRYRAERMLRKEFEALRGRVLGTVRGRLRTSGVNLDASDLDACYAQ
Ga0302184_1030169313300030490PalsaVSPSTLRRYRAERLLRQEFGGLREEVLRSVRGRLRVRGVHLDECDLEACYAQAWQGLYAA
Ga0310037_1025064023300030494Peatlands SoilMSSLAVRRYRAERLLRREFQALRARVIAVVQRRLRGCGVSLDASDLEACYAQAWQGLYMA
Ga0311370_1057484213300030503PalsaMSPLTVRRYRAERMLRQEFEGLRGRVLGTVRGRLRTSGVNLDASDLEACY
Ga0311370_1189415513300030503PalsaMSPLTVRRYRAERMLRKEFEGLRGRVMGTVRGRLRASGVSLVQCDLEACY
Ga0272436_117956523300030523RockLSPLALRRYRAERLLRRDFDGLRTLVLGSVRRRLGARSVRLDADDLEACYAQAWQ
Ga0311357_1057330113300030524PalsaMSPLIVRRYRAERMLRQEFEGLRGRVLGTVRGRLRASGVSLDQSDLEACYAQAWQGLYAAMLGGEEIANPTGWL
Ga0311355_1113573113300030580PalsaMSPLSIRRYRAERLLREEFEALRARVLASVRARLGGSGASLDQGDLEACYAQAWQGL
Ga0311356_1179609713300030617PalsaMSPLTVRRYRAERLLRRDFQALSSTVLAAVKGKLGTATSGLDQSDLEACYAAAWQGLYMAILD
Ga0302311_1026519513300030739PalsaMSPLTLRRYRAERLLRQEFEALRGRVLATVQGRLGASGARLDRSDLDAC
Ga0302314_1087580113300030906PalsaMSPLALRRYRAERLLRDEFEGLRGRVLATVRARLRSSGVILDASDLEACYAQAWQGLYMAVLDGQEVLSPAAW
Ga0302325_1038322033300031234PalsaMSPLHVRRYRAERLLRDEFEGLRERVLTNVRRRLQASGVSLDQDDLGACYAQAWQGLYTA
Ga0302325_1206691823300031234PalsaVSPLTLRRYRAERLLREEFEGLRGRVIATVRGRLGASGASLDPSDLDACYAQA
Ga0302325_1217273613300031234PalsaMSPLTLRRFRAERLLRQEFEGLRGRVISSVKQRLNANGASLDPSDLDACYAQAWQGLYAAVLEGQEI
Ga0302324_10044400513300031236PalsaMSPLTVRRYRAERMLRKEFEGLRGRVMGTVRGRLRASGVSLDQCDLEAC
Ga0302324_10098223313300031236PalsaVSPLTLRRYRAERLLREEFEGLRGRVIATVRGRLGASGASLDPSDLDACYAQAWQGL
Ga0302326_1154116823300031525PalsaMSPLTVRRYRAERMLRKEFEALRGRVLGTVRGRLRTSGVNLDASDLDACYAQAWQGLYAAMLAGEEI
Ga0302326_1346238723300031525PalsaMSPLALRRYRAERLLRDEFEGLRGRVLATVRARLRSSGVILDASDLEACY
Ga0318534_1003485253300031544SoilVSPLSLRRYRAERLLREEFDRLRARVLRNVRARLGWSGVRLDASDLEACYAQAWQG
Ga0307374_1024916213300031670SoilMSPLTVRRYRAERLLRKEFEGLRGRVLSTVRGRLRASGVSLDASDLEACYA
Ga0307372_1052102723300031671SoilMSPLSLRRYRAERLLAKEFTGLRSKVLSVVRFKLRGHTVRLNTADLEACYAQAWQGLYAALLEGEQIDN
Ga0307373_1043341213300031672SoilMSPLTVRRYRAERLLRKEFEGLRGRVLSTVGGRLRASGVSLDASDLEACYAQAWQGLYAAMVEGQE
Ga0310686_10750975823300031708SoilVSPSTLRRYRAERLLRQEFEGLREEVLKSVRGRLRARGVHLDRGDLEACYAVAWQGL
Ga0310686_11945091613300031708SoilMSPLPLRRYRAERLLRREFEGMREGVLAVVRGRLRAAGVQLDAGDLEACYAMAWQGLY
Ga0318496_1028460423300031713SoilVSPLSLRRYRAERLLREEFDRLRARVLRNVRARLGWSGVRLDASDLEACYAQAWQGLYAA
Ga0318492_1061345313300031748SoilMSPASLRRYRAERLLREEFRALRAAVLETVRGRLRAAGVELDPSDLDACYAQAWQGLYAATLQGQRILSPAGWL
Ga0318494_1007143613300031751SoilVSPLSLRRYRAERLLREEFDRLRARVLGNVRARLRWSGVCLDASDLEACYAQAWQGLYAAVLGGERIANPGDWL
Ga0318535_1044953513300031764SoilMSPASLRRYRAERLLREEFRALRAAVLETVRGRLRAAGVELDPSDLDACYAQAWQGLYAATLQGQRILSPAGWLVVA
Ga0318526_1015557323300031769SoilVSPLSLRRYRAERLLREEFDRLRARVLGNVRARLRWSGVCLDASDLEACYAQAWQGLYAAVLGGERIAN
Ga0318547_1101090913300031781SoilMSPLSLRRYRAERLLREEFDRLRARVLRNVRARLGWSGVRLDASDLEACYAQAWQGLYAAVLGGERIANPGGWLS
Ga0302319_1188710323300031788BogMSPLALRRYRAERLLRDEFEGLRGRVLASVRARLRSSGVILDASDLEACYAQAWQGLYMAVLDGQEVLSP
Ga0318568_1020683023300031819SoilVSPLSLRRYRAERLLREEFDRLRARVLRNVRARLGWSGVRLDASDLEACYAQAWQGLY
Ga0318568_1021883913300031819SoilVSPLSLRRYRAERLLREEFDRLRARVLGNVRARLRWSGVCLDASDLEACYAQAWQA
Ga0318495_1029975423300031860SoilVSPLSLRRYRAERLLREEFDRLRARVLRNVRARLGWSGVRLDASDLEACY
Ga0318495_1049206623300031860SoilVSPLSLRRYRAERLLREEFDRLRARVLGNVRARLRWSGVCLDASDLEACYAQAWQGL
Ga0306925_1201412623300031890SoilMSPASLRRYRAERLLREEFRALRAAVLETVRGRLRAAGVELDPSDLDACYAQAWQGLYAATLQGQRILSPA
Ga0318551_1034649223300031896SoilMSPASLRRYRAERLLREEFRALRAAVLETVRGRLRAAGVELDPSDLDACYAQAWQGLYAATL
Ga0307479_1056804513300031962Hardwood Forest SoilMSPASLRHYRAERLLREEFGSLRSRVIGSVRAKLRACGAELDDGDLDACYAQAWQGLYAVTLQGEEVS
Ga0318510_1015586623300032064SoilVSPLSLRRYRAERLLREEFDRLRARVLGNVRARLRWSGVCLDASDLEACYAQAWQGLYAAQHRGV
Ga0335078_1037206113300032805SoilMSPLHLRRYRAERLLRSQFEQLRGRVLGAVRARLGAAALDEADLEACYSQAWQGLYAELMRG
Ga0335073_1086542823300033134SoilMSPLEVRRFRAERLLRREFSDLRGRVLAGVRARLERSGGGLDEGDLEACYAQAWQGLYQAVLEGEQV
Ga0318519_1065144023300033290SoilMSPASLRRYRAERLLREEFRALRAAVLETVRGRLRAAGVELDPSDLDACYAQAWQGLYAATLQGQRILSPAGW
Ga0370492_0361635_1_1593300034282Untreated Peat SoilMSPVSIRRYRAERLLREDFERLRVGVLAAVRARLAASGVTLDASDLDACYAQA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.