Metagenome Family F080384

Basic Information
Family ID	F080384
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	41 residues
Representative Sequence	MAKNGQWQLSAEAAELYERYVARYILGPWAPLLVDAA
Number of Associated Samples	105
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.30 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	93.91 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (91.304 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (9.565 % of family members)
Environment Ontology (ENVO)	Unclassified (29.565 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.478 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.92% β-sheet: 0.00% Coil/Unstructured: 63.08%
Feature Viewer

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Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01614	IclR	34.78
PF09339	HTH_IclR	26.09
PF01717	Meth_synt_2	13.04
PF04392	ABC_sub_bind	1.74
PF13302	Acetyltransf_3	1.74
PF03401	TctC	0.87
PF01557	FAA_hydrolase	0.87
PF02540	NAD_synthase	0.87
PF00589	Phage_integrase	0.87
PF03446	NAD_binding_2	0.87
PF03372	Exo_endo_phos	0.87
PF08471	Ribonuc_red_2_N	0.87
PF01970	TctA	0.87
PF03989	DNA_gyraseA_C	0.87
PF01810	LysE	0.87
PF13340	DUF4096	0.87
PF02281	Dimer_Tnp_Tn5	0.87
PF12833	HTH_18	0.87
PF03061	4HBT	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	34.78
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	13.04
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.74
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.87
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.87
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.87
COG1784	TctA family transporter	General function prediction only [R]	0.87
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.87
COG3333	TctA family transporter	General function prediction only [R]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.30 %
Unclassified	root	N/A	8.70 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.70 %
Unclassified	root	N/A	8.70 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	41.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.74 %
Unclassified	root	N/A	8.70 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	41.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.13 %
Unclassified	root	N/A	8.70 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	41.74 %
Unclassified	root	N/A	8.70 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.87 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	41.74 %
Unclassified	root	N/A	8.70 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.87 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	41.74 %
Unclassified	root	N/A	8.70 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.87 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	41.74 %
Unclassified	root	N/A	8.70 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.87 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	41.74 %
Unclassified	root	N/A	8.70 %
Geobacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	0.87 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.87 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.87 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17191485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	1712	Open in IMG/M
2170459010\|GIO7OMY01EGH1P	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	504	Open in IMG/M
3300001545\|JGI12630J15595_10041888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	927	Open in IMG/M
3300001661\|JGI12053J15887_10243748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	896	Open in IMG/M
3300002128\|JGI24036J26619_10044474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	859	Open in IMG/M
3300004062\|Ga0055500_10023622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1109	Open in IMG/M
3300004268\|Ga0066398_10048371	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300005093\|Ga0062594_100454353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1062	Open in IMG/M
3300005093\|Ga0062594_102349215	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005334\|Ga0068869_101344350	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005451\|Ga0066681_10074398	All Organisms → cellular organisms → Bacteria → Proteobacteria	1903	Open in IMG/M
3300005530\|Ga0070679_100877245	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005530\|Ga0070679_102144168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300005539\|Ga0068853_102276375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	525	Open in IMG/M
3300005578\|Ga0068854_101526111	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300005598\|Ga0066706_10694867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	808	Open in IMG/M
3300005713\|Ga0066905_100563461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	958	Open in IMG/M
3300005713\|Ga0066905_100667455	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005841\|Ga0068863_101338372	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005843\|Ga0068860_101107500	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005879\|Ga0075295_1034215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300005937\|Ga0081455_10312032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1124	Open in IMG/M
3300006028\|Ga0070717_11243952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	677	Open in IMG/M
3300006173\|Ga0070716_101073756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	641	Open in IMG/M
3300006755\|Ga0079222_12274969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	540	Open in IMG/M
3300006844\|Ga0075428_102612535	Not Available	516	Open in IMG/M
3300006847\|Ga0075431_100544019	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300006854\|Ga0075425_100189966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2359	Open in IMG/M
3300006854\|Ga0075425_101361050	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300006854\|Ga0075425_102068261	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300007076\|Ga0075435_100275923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1435	Open in IMG/M
3300007788\|Ga0099795_10243881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	773	Open in IMG/M
3300009038\|Ga0099829_10352393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1212	Open in IMG/M
3300009094\|Ga0111539_11979277	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300009094\|Ga0111539_12559878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	592	Open in IMG/M
3300009098\|Ga0105245_11210772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	803	Open in IMG/M
3300009137\|Ga0066709_103104067	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300009156\|Ga0111538_10491113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1556	Open in IMG/M
3300009156\|Ga0111538_12227635	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300009792\|Ga0126374_10094416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1678	Open in IMG/M
3300010039\|Ga0126309_10904688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	585	Open in IMG/M
3300010043\|Ga0126380_11100374	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300010045\|Ga0126311_11320849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	600	Open in IMG/M
3300010358\|Ga0126370_11464016	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300010359\|Ga0126376_10117726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2066	Open in IMG/M
3300010359\|Ga0126376_11515984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	700	Open in IMG/M
3300010360\|Ga0126372_12797800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	540	Open in IMG/M
3300010362\|Ga0126377_11853355	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300010403\|Ga0134123_13604688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	502	Open in IMG/M
3300012096\|Ga0137389_10690939	Not Available	877	Open in IMG/M
3300012205\|Ga0137362_10552160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	995	Open in IMG/M
3300012207\|Ga0137381_10960951	Not Available	737	Open in IMG/M
3300012350\|Ga0137372_10762565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	696	Open in IMG/M
3300012363\|Ga0137390_11942638	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300012901\|Ga0157288_10025611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1177	Open in IMG/M
3300012907\|Ga0157283_10068805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	867	Open in IMG/M
3300012929\|Ga0137404_11714425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	584	Open in IMG/M
3300012975\|Ga0134110_10321284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	672	Open in IMG/M
3300013096\|Ga0157307_1150088	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300013100\|Ga0157373_10362232	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300013102\|Ga0157371_11423992	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300013306\|Ga0163162_12551015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	588	Open in IMG/M
3300013308\|Ga0157375_11757878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	735	Open in IMG/M
3300014745\|Ga0157377_11750802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	503	Open in IMG/M
3300015245\|Ga0137409_10167748	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp.	1998	Open in IMG/M
3300015371\|Ga0132258_13450307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1084	Open in IMG/M
3300015373\|Ga0132257_100145712	All Organisms → cellular organisms → Bacteria	2770	Open in IMG/M
3300016319\|Ga0182033_11169529	Not Available	688	Open in IMG/M
3300017657\|Ga0134074_1310589	Not Available	576	Open in IMG/M
3300018066\|Ga0184617_1108364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	783	Open in IMG/M
3300018083\|Ga0184628_10599346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	558	Open in IMG/M
3300018468\|Ga0066662_10795930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	916	Open in IMG/M
3300019361\|Ga0173482_10129900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	955	Open in IMG/M
3300021086\|Ga0179596_10719040	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300021478\|Ga0210402_10564301	Not Available	1056	Open in IMG/M
3300022737\|Ga0247747_1047662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	533	Open in IMG/M
3300025904\|Ga0207647_10146124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1384	Open in IMG/M
3300025905\|Ga0207685_10500586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	639	Open in IMG/M
3300025907\|Ga0207645_10466065	Not Available	853	Open in IMG/M
3300025918\|Ga0207662_10324696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1028	Open in IMG/M
3300025923\|Ga0207681_11006992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	699	Open in IMG/M
3300025933\|Ga0207706_10613554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	934	Open in IMG/M
3300025936\|Ga0207670_11759080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	527	Open in IMG/M
3300025937\|Ga0207669_10549436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	932	Open in IMG/M
3300026001\|Ga0208000_111719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	568	Open in IMG/M
3300026041\|Ga0207639_10811021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	872	Open in IMG/M
3300026095\|Ga0207676_10036153	All Organisms → cellular organisms → Bacteria	3755	Open in IMG/M
3300026496\|Ga0257157_1026553	Not Available	950	Open in IMG/M
3300026555\|Ga0179593_1069494	All Organisms → cellular organisms → Bacteria → Proteobacteria	2258	Open in IMG/M
3300027388\|Ga0208995_1069859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	616	Open in IMG/M
3300027874\|Ga0209465_10235092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	916	Open in IMG/M
3300027894\|Ga0209068_10858670	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300027915\|Ga0209069_10984150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	516	Open in IMG/M
3300028802\|Ga0307503_10319751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	785	Open in IMG/M
3300031170\|Ga0307498_10305843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	596	Open in IMG/M
3300031198\|Ga0307500_10043377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1063	Open in IMG/M
3300031199\|Ga0307495_10237659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	518	Open in IMG/M
3300031469\|Ga0170819_11796378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	518	Open in IMG/M
3300031679\|Ga0318561_10539340	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300031679\|Ga0318561_10597743	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031763\|Ga0318537_10025996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2062	Open in IMG/M
3300031769\|Ga0318526_10134499	Not Available	1001	Open in IMG/M
3300031781\|Ga0318547_10648519	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031793\|Ga0318548_10366920	Not Available	706	Open in IMG/M
3300031797\|Ga0318550_10058700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1746	Open in IMG/M
3300031852\|Ga0307410_11227881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	654	Open in IMG/M
3300031858\|Ga0310892_10804527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	652	Open in IMG/M
3300031908\|Ga0310900_10077790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2055	Open in IMG/M
3300031913\|Ga0310891_10041249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1259	Open in IMG/M
3300031943\|Ga0310885_10606195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	607	Open in IMG/M
3300032017\|Ga0310899_10518647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	587	Open in IMG/M
3300032174\|Ga0307470_11664599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	536	Open in IMG/M
3300032180\|Ga0307471_100704024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1175	Open in IMG/M
3300032180\|Ga0307471_101238014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	910	Open in IMG/M
3300032954\|Ga0335083_10702443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	821	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.17%
Host-Associated	Host-Associated	27.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.83%
Plants	Host-Associated → Plants	27.83%
Aquatic	Environmental → Aquatic	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.43%
Sediment	Environmental → Aquatic → Sediment	3.48%
Marine	Environmental → Aquatic → Marine	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.91%
Loam	Environmental → Terrestrial → Soil → Loam	12.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.09%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.74%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.74%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.87%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005879	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026001	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080384

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_01490030	2088090014	Soil	LGENDLNTGEQFQLSDEAAERYERCPARYILGPWAPLLVN
F62_04123060	2170459010	Grass Soil	MERPMNEHEQWHLTLEAAELYERYVARYILGPWAPALVDAAHVTVGER
JGI12630J15595_100418882	3300001545	Forest Soil	MSEHEQWHLSPEAAERYERVVARYILGPWAPLLVDAAG
JGI12053J15887_102437481	3300001661	Forest Soil	MNEHEQWHLTSEAAELYERYVARYILGPWAPSLVDA
JGI24036J26619_100444741	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	MTTNEQWQLTMKAAELYERCPARYILGPWAPLLVETAHVAVSER
Ga0055500_100236221	3300004062	Natural And Restored Wetlands	MEREMKANEQWHIAKEAAELYERVVARHILGPWAPSLVDAAR
Ga0066398_100483711	3300004268	Tropical Forest Soil	LAANEQFQLSDGAAERYERCPARYILGPWAPLLVDAASPAAGERVL
Ga0062594_1004543532	3300005093	Soil	MEWEMAKNGQWQLSVEAAERYERYVARYILGPWASLLVDASQVG
Ga0062594_1023492151	3300005093	Soil	MNTREQWQLTLEAAELYERCPARYILGPWAPLLVEAARVASGERV
Ga0068869_1013443501	3300005334	Miscanthus Rhizosphere	MNRPEQWHLSNDAAQRYERCVARCILGPWAPLLVETAGIV
Ga0066681_100743981	3300005451	Soil	MECEMNKHQPWHLTAEAAELYERYVARYILGPWAPLLVDA
Ga0070679_1008772451	3300005530	Corn Rhizosphere	MTTNEQWQLTMKAAELYERCPARYILGPWAPLLVETAHVAVS
Ga0070679_1021441682	3300005530	Corn Rhizosphere	MEWEMAKNGQWQLSVEAAERYERYVARYILGPWASLLVDASQVGVGER
Ga0068853_1022763752	3300005539	Corn Rhizosphere	MEWEMAKNGQWQLSAEAAQRYERYVARYILGPWVPLLVDASQVGVG
Ga0068854_1015261111	3300005578	Corn Rhizosphere	MNRPEQWHLNADAAQRYERCVAQYILGPWAPSLVETAGI
Ga0066706_106948673	3300005598	Soil	MECEMNKHQPWHLTAEAAELYERYVARYILGPWAPLLVDAACLA
Ga0066905_1005634612	3300005713	Tropical Forest Soil	MNKHEQWHLTAEAAELYERYVVRYILGPWAPLLVD
Ga0066905_1006674551	3300005713	Tropical Forest Soil	MSKPEQWHLSPDAAERYEQVVARYILGPWAPLLVDAARL
Ga0068863_1013383721	3300005841	Switchgrass Rhizosphere	MNKHEPWHLSAEAAELYERYVARYILGPWAPLLVDAACLAAGE
Ga0068860_1011075001	3300005843	Switchgrass Rhizosphere	MNKHEQWHLSPDAAERYEQVVARYILGPWAPLLVDAAGL
Ga0075295_10342151	3300005879	Rice Paddy Soil	MSGQWQLEGSAAEIYERTAARYILGPWALGLVDLAAVRGGE
Ga0081455_103120322	3300005937	Tabebuia Heterophylla Rhizosphere	MKHEPWQVTAEAAELYERYPARYILGPWAPLLVDAVIDGRPR
Ga0070717_112439521	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAKNGQWQLSVEAAERYERYVARYILGPWASLLVDASQVGVGERV
Ga0070716_1010737561	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNKHEQWQVCAAAAEQYERVVARYIFGPWTPLLLD
Ga0079222_122749692	3300006755	Agricultural Soil	MNRQGARQEAWQLSGDAAELYERHVARHILGPWAPLLV
Ga0075428_1026125351	3300006844	Populus Rhizosphere	MAKNGQWQLSAEAAELYERYVARYILGPWAPLLVDVAH
Ga0075431_1005440193	3300006847	Populus Rhizosphere	MSKHEQWHLSPDAAERYQQVVVRYILGPWAPLLVD
Ga0075425_1001899661	3300006854	Populus Rhizosphere	MSRQGARQEAWQLTADAAELYERYVARHILGPWAPLLVDV
Ga0075425_1013610502	3300006854	Populus Rhizosphere	MSKHEQWHLSPDAAERYQQVVVRYILGPWAPLLVDAAGLSA
Ga0075425_1020682611	3300006854	Populus Rhizosphere	MMNKHEQWHIGPDAAERYEQVVARYILSPWAPLLVDAAGL
Ga0075435_1002759231	3300007076	Populus Rhizosphere	MSRQGARQEAWQLTADAAELYERYVARHILGPWAPLLVDVAR
Ga0099795_102438811	3300007788	Vadose Zone Soil	MNEHEQWYLTSEAAELYERYVARYILGPWAPSLVDAAHVTV
Ga0099829_103523933	3300009038	Vadose Zone Soil	MKTNEQWHITLEAARLYERIVARHILGPWAPLLVDAAHLAGG
Ga0111539_119792771	3300009094	Populus Rhizosphere	MATNEQWQLTMKAAELYERCPARYILGPWAPLLVETAHVTAGERV
Ga0111539_125598781	3300009094	Populus Rhizosphere	MNRPEQWHLNKDAAQRYERCVAHYILGPWAPLLVETAGIVSGER
Ga0105245_112107722	3300009098	Miscanthus Rhizosphere	MIAHAQWQLTAPAAELYEHVVARYILGPWAPVLVDAAH
Ga0066709_1031040671	3300009137	Grasslands Soil	MEYEMNTHEPWHLTAEAAELYERYVARYILGPWAPLL
Ga0111538_104911131	3300009156	Populus Rhizosphere	MKANEQWRITREAAELYERVVARHILGPWAPLLVEEAG
Ga0111538_122276352	3300009156	Populus Rhizosphere	MATNEQWQLTTKAAELYERCPARYILGPWAPLLVETAHVTAG
Ga0126374_100944161	3300009792	Tropical Forest Soil	LGENDLNTGEQFQLSDEAAERYERCPARYILGPWAPLLVNAARPTAGERVLDV
Ga0126309_109046881	3300010039	Serpentine Soil	MTNHEQWHLTREAAELYERYVARYILGPWAPMLLDAARLASGERVL
Ga0126380_111003741	3300010043	Tropical Forest Soil	MAKNAQWQLSAQAAELYERYVARYILGPWAPLLVD
Ga0126311_113208491	3300010045	Serpentine Soil	VNKEEQWQMSKEAAEAYERYVARYILGPWAPLLVD
Ga0126370_114640161	3300010358	Tropical Forest Soil	MERTMNAPDQWQVTPQAAELYERYPVRYILGPWAPLLVDA
Ga0126376_101177264	3300010359	Tropical Forest Soil	MERPMKHEPWQVTAEAAELYERYPARYMLGPWAPLLVYAARLKVG
Ga0126376_115159842	3300010359	Tropical Forest Soil	METEMNKHESWQLTAEAAELYERYVARYILGPWAPLLVDAARLTAG
Ga0126372_127978002	3300010360	Tropical Forest Soil	MSTHEQWHLSAEAAELYERYVVRYILGPWAPLLVDAAHVAVGQ
Ga0126377_118533551	3300010362	Tropical Forest Soil	MNKHEQWHLSPGAAERYEQVVARYILGPWAPLLVDAAGLSARERVLDL
Ga0134123_136046881	3300010403	Terrestrial Soil	MNRPEQWHLSNDAAQRYERCVARCILRPWAPLLVETAGIVAGERI
Ga0137389_106909391	3300012096	Vadose Zone Soil	VNTGEQFQLSDEAAERYERCPARYILGPWAPLLVNAARPTAGERVL
Ga0137362_105521602	3300012205	Vadose Zone Soil	MAKNGQWQLSAEAAERYERYVARYILGPWAPLLVDASQVGVGERVLD
Ga0137381_109609511	3300012207	Vadose Zone Soil	LGENDLNTGEQFQLSDEAAERYERCPARYILGPWAPLLVNAARPTAGERV
Ga0137372_107625652	3300012350	Vadose Zone Soil	MERPMRHEPWQVTLEAAELYERYPARYILGPWTPLLVDA
Ga0137390_119426382	3300012363	Vadose Zone Soil	MNKDEQWHLTAEAAERYERCVARYILGPWAPLLADAARLAAGERV
Ga0157288_100256111	3300012901	Soil	MAKDEQWHMSAEAAELYERIPARYILGPWAPLLVSA
Ga0157283_100688052	3300012907	Soil	MAKNAQWQLSAEAAELYERYVARYILGPWAPLLVDAAHVGVGERV
Ga0137404_117144251	3300012929	Vadose Zone Soil	MAKNGQWQLSAEAAELYERYVARHILGPWAPLLVDVADVGVG
Ga0134110_103212842	3300012975	Grasslands Soil	MECEMNKHQPWHLTAEAAELYERYVARYILGPWAPLLVDAACLAAG
Ga0157307_11500881	3300013096	Soil	MATNEQWQLTLKSAELYELCPARYILGPWAPLLVETARLSSGERVLDVA
Ga0157373_103622323	3300013100	Corn Rhizosphere	MAKDEQWHMSVQAAALYERCPARYILGPWAPLLVETARVAAGERV
Ga0157371_114239921	3300013102	Corn Rhizosphere	MATNEQWQLTMKAAELYERCPARYILGPWAPLLVETAHVT
Ga0163162_125510152	3300013306	Switchgrass Rhizosphere	MERQMTRHEQWHLTAEAAELYERTVARHILGPWAPLLVEAIHVATG
Ga0157375_117578782	3300013308	Miscanthus Rhizosphere	MNKHEQWHLSPDAAERYEQVVARYILGPWAPLLVDAAGLSTGERVL
Ga0157377_117508022	3300014745	Miscanthus Rhizosphere	MATNGQWQLSAEAAELYERYVARYILGPWATLLVDVAQVGVG
Ga0137409_101677481	3300015245	Vadose Zone Soil	MKPHEQWHITREAAELYERVVARHILGPWAPSLVDAGRVAAG
Ga0132258_134503071	3300015371	Arabidopsis Rhizosphere	MALRWGVAMNTHEQWQLTMKAAELYERYPARYILGPWAPLLVDVTRLTAGERVL
Ga0132257_1001457121	3300015373	Arabidopsis Rhizosphere	MEWKMTKHEQWQLSDEAAEQYERCPARYILGPWAPFLVDAARLVAGERV
Ga0182033_111695292	3300016319	Soil	LNTGQQFQLSDEAAERYERCAARYILGPWAPLLVNAAR
Ga0134074_13105892	3300017657	Grasslands Soil	MACEMNKHEAWQLTREAAEPYERYVARYILAPWAPLLVDGARL
Ga0184617_11083642	3300018066	Groundwater Sediment	MAKNGQWQLSAEAAELYECYVARYILGPWAPLLVDIAHVGVGERLRERFDVLPI
Ga0184628_105993461	3300018083	Groundwater Sediment	MDREMTKHQPWHLSAEAAELYERYVARYILGPWAPLLVDTACLA
Ga0066662_107959301	3300018468	Grasslands Soil	MSQIEQWQLTAEAAELYERYPARYILRPWAPLLIDAACLIGGE
Ga0173482_101299001	3300019361	Soil	MAKKRHKNGQWQLSAEAAKLYERYVARYILGPWAPL
Ga0179596_107190402	3300021086	Vadose Zone Soil	VNTGEQFQLSDEAAERYERCAARYILGPWAPLLVNAACPAAGERV
Ga0210402_105643012	3300021478	Soil	LNTGEQFQLSDEAAERYERCPARYILGPWAPLLVNAARPAAGERVLDV
Ga0247747_10476621	3300022737	Soil	MAKNGQWQLSVEAAERYERYVARYILGPWASLLVDASQV
Ga0207647_101461241	3300025904	Corn Rhizosphere	MEWEMAKNGQWQLSVEAAERYERYVARYILGPWASLLVDASQVGVGERV
Ga0207685_105005861	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MSTNEQWQLTDDAAARYERCVARYILAPWAPMLVDAAHVVGVSM
Ga0207645_104660652	3300025907	Miscanthus Rhizosphere	MSANEQWQLSAKAAELYQRIPARYILGPWAPLLVERAAVAQGERVLD
Ga0207662_103246962	3300025918	Switchgrass Rhizosphere	MSANEQWQLSAKAAELYQRIPARYILGPWAPLLVERAAVAQGERVL
Ga0207681_110069921	3300025923	Switchgrass Rhizosphere	MAKNGQWQLSAEAAELYERYVARYILGPWAPLLVDAAHV
Ga0207706_106135541	3300025933	Corn Rhizosphere	MAKNAQWQLSAEAAELYERYVARYILGPWASLLVDASQ
Ga0207670_117590802	3300025936	Switchgrass Rhizosphere	MAKHEQWHLSAEAAELYERYVARYILGPWAPLLLEAI
Ga0207669_105494362	3300025937	Miscanthus Rhizosphere	MAKNGQWQLSAEAAELYERYVARYILGPWAPLLVDVAHVDIG
Ga0208000_1117191	3300026001	Rice Paddy Soil	MSGQWQLEGNAAELYERYPGRYILGPWASGLVELAGVKA
Ga0207639_108110211	3300026041	Corn Rhizosphere	MAKNGQWQLSAEAAELYERYVARYILGPWAPLLVDAA
Ga0207676_100361531	3300026095	Switchgrass Rhizosphere	MNRPEQWHLNADAAQRYERCVAHYILGPWAPLLVEAAGI
Ga0257157_10265532	3300026496	Soil	MEGEMSEHEQWQVTAEAAKLYERYPARYILGPWAPL
Ga0179593_10694941	3300026555	Vadose Zone Soil	MAKNGQWQLSAEAAELYECYVARYILGPWAPLLVDSAHVGVGERV
Ga0208995_10698592	3300027388	Forest Soil	MKTNEQWHMAAEAAALYERIVARHILGPWAPSLVDAAHVAE
Ga0209465_102350922	3300027874	Tropical Forest Soil	MSKPEQWHLSPDAAERYEQVVARYILGPWAPLLVD
Ga0209068_108586702	3300027894	Watersheds	VNTGEQFQLSDEAAERYERCPARYILGPWAPLLVNA
Ga0209069_109841501	3300027915	Watersheds	MAHHSQWQLSAAAAERYERYVARFLLGPWAPSLLDAAQLGPG
Ga0307503_103197511	3300028802	Soil	MNAHEQWHLSSEAAEQYERYVARYILGPWAPSLVDAA
Ga0307498_103058432	3300031170	Soil	MAKNGQWQLSAEAAQRYERYVARYILGPWAPLLVDASQ
Ga0307500_100433771	3300031198	Soil	MEWEMAKNGQWQLSAEAAQRYERYVARYILGPWAPLLVDASQVGVGE
Ga0307495_102376591	3300031199	Soil	MNKHEQWHIGPDAAERYERIVARYILGPWAPLLVDAA
Ga0170819_117963781	3300031469	Forest Soil	MNEHEQWHLSSEAAELYERYVARYILGPWAPSLVD
Ga0318561_105393401	3300031679	Soil	LNTGQQFQLSDEAAERYERCAARYILGPWAPLLVNAARPAAGERVLD
Ga0318561_105977431	3300031679	Soil	LDTGEQFQLSDEAAERYECCPARYILGPWAPSLVNAARPTAGERVLDVA
Ga0318537_100259963	3300031763	Soil	LSTGEQFQLSDEAAERYERCPARYILGPWAPLLVNAARPTAGERVLD
Ga0318526_101344992	3300031769	Soil	LSTGEQFQLSDEAAERYERCPARYILGPWAPLLVNAARPTAGE
Ga0318547_106485192	3300031781	Soil	LNTGQQFQLSDEAAERYERCAARYILGPWAPLLVNAARPAAGERVLDI
Ga0318548_103669201	3300031793	Soil	LNTGQQFQLSDEAAERYERCPARYILGPWAPLLVN
Ga0318550_100587003	3300031797	Soil	LDTGEQFQLSDEAAERYECCPARYILGPWAPSLVN
Ga0307410_112278811	3300031852	Rhizosphere	MNTEEQWQVSKEAAEAYERHVARYILGPWAPLLVDAARLAPGE
Ga0310892_108045272	3300031858	Soil	MAKNGQWQLSVEAAERYERYVARYILGPWASLLVDA
Ga0310900_100777901	3300031908	Soil	MSANEQWQLSAKAAELYQRIPARYILGPWAPLLVERAAVA
Ga0310891_100412491	3300031913	Soil	MNKHEQWHLAAEAAELYERYVARYILGPWAPLLADAARLAP
Ga0310885_106061951	3300031943	Soil	MSANEQWQLSAKAAELYQRIPARYILGPWAPLLVERAAVAQGER
Ga0310899_105186472	3300032017	Soil	MNKHEQWHLAAEAAELYERYVARYILGPWAPLLADAARL
Ga0307470_116645991	3300032174	Hardwood Forest Soil	MAKNGQWQLSAEAAELYECYVARYILGPWAHLLVDIAH
Ga0307471_1007040241	3300032180	Hardwood Forest Soil	MSKNGQWQLDGSAAELYERYVARHILGPWVPGLLDRAGV
Ga0307471_1012380142	3300032180	Hardwood Forest Soil	MNKHEPWHLSAEAAELYERYVARYILGPWAPLLVDAAC
Ga0335083_107024431	3300032954	Soil	VSANGQWRLDGNAAELYERYVARYILGPWVPRLLDIANVRP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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