Metagenome / Metatranscriptome Family F080370

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080370
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	53 residues
Representative Sequence	MSRVTMPVLVRLLLCAALFGVLGASSTPSQESASTPESHLPTTNSLSGYIIAVG
Number of Associated Samples	89
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.61 %
% of genes near scaffold ends (potentially truncated)	29.57 %
% of genes from short scaffolds (< 2000 bps)	87.83 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.652 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.174 % of family members)
Environment Ontology (ENVO)	Unclassified (23.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.565 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.39% β-sheet: 0.00% Coil/Unstructured: 75.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13424	TPR_12	18.26
PF07719	TPR_2	5.22
PF01136	Peptidase_U32	1.74
PF02222	ATP-grasp	0.87
PF01642	MM_CoA_mutase	0.87
PF12392	DUF3656	0.87
PF00378	ECH_1	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0826	23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family	Translation, ribosomal structure and biogenesis [J]	1.74
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.65 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	93.04 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	93.04 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	83.48 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	6.96 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	83.48 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	6.96 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	83.48 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6.96 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	83.48 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	6.96 %
Unclassified	root	N/A	4.35 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	83.48 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6.96 %
Unclassified	root	N/A	4.35 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10025459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1757	Open in IMG/M
3300002568\|C688J35102_120360670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1014	Open in IMG/M
3300003163\|Ga0006759J45824_1122267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	731	Open in IMG/M
3300003267\|soilL1_10024278	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2056	Open in IMG/M
3300003544\|Ga0007417J51691_1066605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1143	Open in IMG/M
3300003573\|Ga0007412J51696_1102317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	689	Open in IMG/M
3300003576\|Ga0007413J51701_1032292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1180	Open in IMG/M
3300004153\|Ga0063455_100028194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1646	Open in IMG/M
3300004799\|Ga0058863_11692184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1178	Open in IMG/M
3300004803\|Ga0058862_12383209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	673	Open in IMG/M
3300005167\|Ga0066672_10439659	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	852	Open in IMG/M
3300005171\|Ga0066677_10289927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300005177\|Ga0066690_10102900	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1835	Open in IMG/M
3300005178\|Ga0066688_10112357	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1676	Open in IMG/M
3300005187\|Ga0066675_10380963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1038	Open in IMG/M
3300005187\|Ga0066675_10800401	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	712	Open in IMG/M
3300005345\|Ga0070692_10576031	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	741	Open in IMG/M
3300005434\|Ga0070709_10022753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3671	Open in IMG/M
3300005434\|Ga0070709_10030355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3243	Open in IMG/M
3300005434\|Ga0070709_10168748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1528	Open in IMG/M
3300005434\|Ga0070709_10545976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	886	Open in IMG/M
3300005435\|Ga0070714_100048899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3599	Open in IMG/M
3300005436\|Ga0070713_100001863	All Organisms → cellular organisms → Bacteria	13610	Open in IMG/M
3300005436\|Ga0070713_101835322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300005439\|Ga0070711_101903073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300005451\|Ga0066681_10285616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1007	Open in IMG/M
3300005458\|Ga0070681_10168020	All Organisms → cellular organisms → Bacteria	2116	Open in IMG/M
3300005547\|Ga0070693_100277118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1122	Open in IMG/M
3300005563\|Ga0068855_100937304	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	913	Open in IMG/M
3300005578\|Ga0068854_101015948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	735	Open in IMG/M
3300005587\|Ga0066654_10248520	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	937	Open in IMG/M
3300005587\|Ga0066654_10604803	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300005614\|Ga0068856_101035983	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	839	Open in IMG/M
3300005616\|Ga0068852_100490307	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300005875\|Ga0075293_1014052	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	954	Open in IMG/M
3300006028\|Ga0070717_10157311	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1970	Open in IMG/M
3300006028\|Ga0070717_12155722	Not Available	501	Open in IMG/M
3300006173\|Ga0070716_101421963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300006175\|Ga0070712_100028755	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3721	Open in IMG/M
3300006358\|Ga0068871_102372045	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300006755\|Ga0079222_10605652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	838	Open in IMG/M
3300006755\|Ga0079222_11138946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300006804\|Ga0079221_10094367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1455	Open in IMG/M
3300006804\|Ga0079221_10994509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	629	Open in IMG/M
3300006806\|Ga0079220_11015124	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	660	Open in IMG/M
3300006854\|Ga0075425_101490408	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M
3300006871\|Ga0075434_100628696	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1092	Open in IMG/M
3300006903\|Ga0075426_10516692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
3300006954\|Ga0079219_10010404	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3095	Open in IMG/M
3300009551\|Ga0105238_12562626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300010095\|Ga0127475_1073301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	749	Open in IMG/M
3300010140\|Ga0127456_1009491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	589	Open in IMG/M
3300010320\|Ga0134109_10424375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	536	Open in IMG/M
3300010325\|Ga0134064_10107805	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	924	Open in IMG/M
3300010401\|Ga0134121_13130551	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300011332\|Ga0126317_10496827	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1046	Open in IMG/M
3300012212\|Ga0150985_100789697	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1317	Open in IMG/M
3300012212\|Ga0150985_102039205	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	765	Open in IMG/M
3300012212\|Ga0150985_104257712	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	960	Open in IMG/M
3300012212\|Ga0150985_107632003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	899	Open in IMG/M
3300012212\|Ga0150985_114718874	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	665	Open in IMG/M
3300012212\|Ga0150985_116558785	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300012212\|Ga0150985_118124858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	991	Open in IMG/M
3300012212\|Ga0150985_119963465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1190	Open in IMG/M
3300012384\|Ga0134036_1078324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1005	Open in IMG/M
3300012384\|Ga0134036_1146938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1154	Open in IMG/M
3300012388\|Ga0134031_1090441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300012397\|Ga0134056_1196719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1209	Open in IMG/M
3300012405\|Ga0134041_1136116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1196	Open in IMG/M
3300012405\|Ga0134041_1171667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	989	Open in IMG/M
3300012469\|Ga0150984_102784155	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1274	Open in IMG/M
3300012469\|Ga0150984_110340571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	941	Open in IMG/M
3300012469\|Ga0150984_112246377	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	700	Open in IMG/M
3300012469\|Ga0150984_120926434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	870	Open in IMG/M
3300012955\|Ga0164298_10502418	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	811	Open in IMG/M
3300012957\|Ga0164303_11487613	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300012961\|Ga0164302_10745304	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	732	Open in IMG/M
3300012961\|Ga0164302_11426732	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300012986\|Ga0164304_10617336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	812	Open in IMG/M
3300012986\|Ga0164304_10745911	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	749	Open in IMG/M
3300012989\|Ga0164305_10603425	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	882	Open in IMG/M
3300013102\|Ga0157371_10989918	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	641	Open in IMG/M
3300013105\|Ga0157369_10236606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1908	Open in IMG/M
3300013105\|Ga0157369_10615439	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1121	Open in IMG/M
3300013105\|Ga0157369_12524996	Not Available	520	Open in IMG/M
3300013296\|Ga0157374_10458926	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1276	Open in IMG/M
3300013307\|Ga0157372_13382146	Not Available	508	Open in IMG/M
3300014487\|Ga0182000_10014176	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2003	Open in IMG/M
3300018433\|Ga0066667_10499378	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1002	Open in IMG/M
3300020070\|Ga0206356_10696878	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	787	Open in IMG/M
3300020077\|Ga0206351_10255623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300020078\|Ga0206352_10625544	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300021362\|Ga0213882_10206162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	811	Open in IMG/M
3300021445\|Ga0182009_10365604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	739	Open in IMG/M
3300021560\|Ga0126371_10605163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1245	Open in IMG/M
3300022531\|Ga0242660_1069959	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	806	Open in IMG/M
3300025911\|Ga0207654_11397600	Not Available	510	Open in IMG/M
3300025915\|Ga0207693_10007208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9154	Open in IMG/M
3300025929\|Ga0207664_10096078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2439	Open in IMG/M
3300025933\|Ga0207706_11072719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	674	Open in IMG/M
3300025989\|Ga0207998_1009412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	827	Open in IMG/M
3300026142\|Ga0207698_12087742	Not Available	580	Open in IMG/M
3300026300\|Ga0209027_1020411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2511	Open in IMG/M
3300026316\|Ga0209155_1029972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2209	Open in IMG/M
3300026322\|Ga0209687_1036847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1591	Open in IMG/M
3300026342\|Ga0209057_1178289	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	615	Open in IMG/M
3300026542\|Ga0209805_1329557	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	579	Open in IMG/M
3300030511\|Ga0268241_10017126	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1397	Open in IMG/M
3300030511\|Ga0268241_10062497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	816	Open in IMG/M
3300034268\|Ga0372943_0002768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	8728	Open in IMG/M
3300034659\|Ga0314780_019081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1148	Open in IMG/M
3300034661\|Ga0314782_076656	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	718	Open in IMG/M
3300034665\|Ga0314787_015609	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1039	Open in IMG/M
3300034667\|Ga0314792_025906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1149	Open in IMG/M
3300034668\|Ga0314793_014255	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1171	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.70%
Host-Associated	Host-Associated	31.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.83%
Plants	Host-Associated → Plants	29.57%
Human	Host-Associated → Human	1.74%
Aquatic	Environmental → Aquatic	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.91%
Digestive System	Host-Associated → Human → Digestive System	1.74%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.87%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.09%
Loam	Environmental → Terrestrial → Soil → Loam	19.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.22%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.22%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.35%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.87%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.87%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.57%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	9.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.09%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.35%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.74%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.87%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003163	Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003544	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003573	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Bulk_28 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003576	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Bulk_29 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010140	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012384	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012397	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025989	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303 (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_100254592	3300001305	Soil	LPVMARLLLCAALFGVMGASATPSQEGASTQESHLPTTNSLSGYIIAVG*
C688J35102_1203606701	3300002568	Soil	MSRVHLPVMARLLLCAALFGVMGASATPSQEGASTQESHLPTTNSLSGYIIAVG*
Ga0006759J45824_11222673	3300003163	Avena Fatua Rhizosphere	MSRVTMPVLVRLLLCAALFGVMGASATPSQESASTPDSHLPTTNSLS
soilL1_100242782	3300003267	Sugarcane Root And Bulk Soil	MSRVNLPVLVRLLLCAALFGVLGASTMPSQESASTPESHLPTTNSLSGYIIAVG*
Ga0007417J51691_10666052	3300003544	Avena Fatua Rhizosphere	MSRVTMPVPVRLLLCAALFGVMGASATPSQEGASTPESHLPTTNSLS
Ga0007412J51696_11023172	3300003573	Avena Fatua Rhizosphere	MSRVTMPVPVRLLLCAALFGVMGASATPSQEGASTPESHLPTTNSLSGYIIAVG*
Ga0007413J51701_10322922	3300003576	Avena Fatua Rhizosphere	MSRVTMPVLVRLLLCAALFGVMGASATPSQESASTPDSHLPTTNSLSGYIIAVG*
Ga0063455_1000281943	3300004153	Soil	MSRVHLPVMARLLLCAALFGVMGASATPSQESASTPDSHLPTTNSLSGYIIAVG*
Ga0058863_116921841	3300004799	Host-Associated	MSRVTMPVLVRLLLCAALFGVLGASVTPSQESASTPESHLPTTNSLSGYIIAVG*
Ga0058862_123832091	3300004803	Host-Associated	MSRVHLPVLVRLLACAALFAVMSASMAPSSKSSDEGDMAATHLPTTNSFSGYIIAVG*
Ga0066672_104396592	3300005167	Soil	MPVLVRLLMCAALAGVLSASTEPSQDGASSAATHLPTTNSFSGYIIAVG*
Ga0066677_102899272	3300005171	Soil	MPVLVRLLMCAALAGVLSASTEPSQDGATSAATHLPTTNSFSGYIIAVG*
Ga0066690_101029004	3300005177	Soil	MSRVTMPVLVRLLMCAALAGVLSASTEPSQDGASSAATHLPTTNSFS
Ga0066688_101123572	3300005178	Soil	MSRVTMPVLVRLLMCAALAGVLSASTEPSQDGASSAATHLPTTNSFSGYIIAVG*
Ga0066675_103809631	3300005187	Soil	MSRVTMPVLVRLLLCAALFGVLSASTKPSGLWPEDGASSAAMHLPTTNSLSGYIIAVG*
Ga0066675_108004012	3300005187	Soil	MSRVTMPVLVRLLMCAALVGVLGAATEPSQDGASSAATHLPTTNSFSGYIIAVG*
Ga0070692_105760312	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVNLPVMARLLLCAALFGVLGAATTPSQESANTPESHLPTTNSLSGYIIAVG*
Ga0070709_100227532	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VLVRLLLCAALFGVLSASATPSGQAAYESASMPDGHLPTTNSLSGYIIAVG*
Ga0070709_100303552	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLTMPVLVRLLLCAALFGVPSASATHSGQAAYASASMPDSHLPTTNSLSGYIIAVG*
Ga0070709_101687482	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVTMPVLVRLLMCAALFAVLGASASPSSQWSHEGDSAATHLPTTNSFSGYIIAVG*
Ga0070709_105459762	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVHLPVLVRLLACAALFAVMSASMAPSSKSSDEGDMAATHLPTTNSFSGY
Ga0070714_1000488993	3300005435	Agricultural Soil	MSRLTMPVLVRLLLCAALLGVPSASATHSGQAAYASASMPDSHLPTTNSLSGYIIAVG*
Ga0070713_1000018632	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSQVTMPVLVRLLLCAALFGVLSASATPSGQAAYESASMPDGHLPTTNSLSGYIIAVG*
Ga0070713_1018353221	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSRFRTPVLVRLLMCATLLGVSASATRSGQLPDNSASVAATDLPINSSFSGYIIAVG*
Ga0070711_1019030732	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVNMPVLVRLLMCAALFAVLGASASPSSQWSHEGDAAATHLPTTNSFSG
Ga0066681_102856162	3300005451	Soil	MFRTTMPVLVRLLMCAALFAVLGVSASPSSQWSHEGNSAATHLPTTNSFSGYIIAVG*
Ga0070681_101680202	3300005458	Corn Rhizosphere	MSRVTMPVLVRLLLCAALFGVLGASATPSQESAGTPESHLPTTNSLSGYIIAVG*
Ga0070693_1002771182	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVNLPVLVRLLMCAALFGVLGAATTPSQESAGTPESHLPTTNSLSGYIIAVG*
Ga0068855_1009373041	3300005563	Corn Rhizosphere	MSRVTMPVLVRLLLCAALFGVLSASATPSGQAAYESASMPDGHLPTTNSLSGYIIAVG*
Ga0068854_1010159482	3300005578	Corn Rhizosphere	MSRVTMPVLVRLLLCAALFGVLGASATPSQESGGTPESHLPTTNSLSGYIIAVG*
Ga0066654_102485202	3300005587	Soil	MSLVTMPVVVRLLSCAALFGAVSVSSAPDGQWSQSNASTPATHLPTTNSFSGYIIAVG*
Ga0066654_106048031	3300005587	Soil	LYRTRRRLDPMSRVTMPVLVRLLMCAALFGVLSASTLPSEESASNAATHLPTTNSLSGYIIAVG*
Ga0068856_1010359832	3300005614	Corn Rhizosphere	PVLVRLLMCAALFGVLGAATTPSQESAGTPESHLPTTNSLSGYIIAVG*
Ga0068852_1004903072	3300005616	Corn Rhizosphere	MSRVTMPVLVRLLLCAALFGALGASATPSSESASTPESHLPTTNSLSGYIIAVG*
Ga0075293_10140522	3300005875	Rice Paddy Soil	MSRVTMPVLVRLLMCAALFGVLGTASQPAWCHAQDQASFPSGKLPIKSSFSGYIIAVG*
Ga0070717_101573112	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVTMPVLVRLLLCAALFGVLSASATPSTQSAYESASMPDAHLPTTNSLSGYIIAVG*
Ga0070717_121557221	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVTMPVLVRLLLCAALVVLGASTTPSSQWSNEGDSSAATHLPTTNSFSGYIIAVG*
Ga0070716_1014219631	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LLLCAALFGVLSASATPSGQAAYESASMPDGHLPTTNSLSGYIIAVG*
Ga0070712_1000287551	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VTMPVLVRLLMCAALFAVLGASASPSTQWAHEGDSAATHLPTTNSFSGYIIAVG*
Ga0068871_1023720452	3300006358	Miscanthus Rhizosphere	PRRLDPMSRVTMPVLVRLLLCAALFGVLGASVTPSQESASTPESHLPTTNSLSGYIIAVG
Ga0079222_106056522	3300006755	Agricultural Soil	MSRFRTPVLVRLLMCAALLGVSASATRSGQLPDNSASVAATDLPINSSFSGYIIAVG*
Ga0079222_111389461	3300006755	Agricultural Soil	MSRVTMPVLVRLLLCAALFGVLGGSATPSQESASTPDSHLPTTNSLSGYIIAVG*
Ga0079221_100943672	3300006804	Agricultural Soil	MSRVTTPVLVRLLLCAALVVLGASTTPSNQWSNEGDGSAATHLPTTNSFSGYIIAVG*
Ga0079221_109945092	3300006804	Agricultural Soil	MSRVNLPVLVRLVLCAALFGVLGGSAMPSQESAGTPESHLPTTNSLSGYIIAVG*
Ga0079220_110151242	3300006806	Agricultural Soil	MSRVTMPVLVRLLLCAALFGVLGASSTPSQESASTPESHLPTTNSLSGYIIAVG*
Ga0075425_1014904081	3300006854	Populus Rhizosphere	MSRVNLPVLVRLLTCAALFAVVSASASPSSNEGDVAATHLPTTNSFSGYIIAVG*
Ga0075434_1006286961	3300006871	Populus Rhizosphere	MSQVRMPVLVRLLTCAALVGVLSASTMPTDDASAQGGSSSEHLPTTNSLSGYIIAVG*
Ga0075426_105166921	3300006903	Populus Rhizosphere	MSRVTMPVLVRLLLCAALVVSGARTTPSSQWSNEGDSSAATHLPTTNSFSGYIIAVG*
Ga0079219_100104042	3300006954	Agricultural Soil	MSQVHLPVLVRLLTCAALFAVMSASTAPSSKSSDEGDMAATHLPTTNSFSGYIIAVG*
Ga0105238_125626261	3300009551	Corn Rhizosphere	MPVLVRLLMCAALFGVLGAATTPSQESAGTPESHLPTTNSLSGYIIAVG*
Ga0127475_10733011	3300010095	Grasslands Soil	MPVLVRLLACAALFGAVSVSSAPDGQWSQSSANTPATHLPTTNSFSGYIIAVG*
Ga0127456_10094912	3300010140	Grasslands Soil	MPVLVRLLMCAALFGVLSASTLPSQESASNAATHLPTTNSLSGYIIAVG*
Ga0134109_104243751	3300010320	Grasslands Soil	MFRTTMPVLVRLLMCAALFAVLGVSASPSSQWSHEGNSAATHLPTTNSFSG
Ga0134064_101078052	3300010325	Grasslands Soil	MSRVTMPVLVRLLMCAALAGVLSASTEPPQDGASSAATHLPTTNSFSGYIIAVG*
Ga0134121_131305511	3300010401	Terrestrial Soil	MSRVNMPVLVRLLMCAALFAVLGASASPSSQWSHEADSAATHLPTTNSFSGYIIAVG*
Ga0126317_104968272	3300011332	Soil	MPVLVRLLLCAALFGVMGASATPSQESASTPDSHLPTTNSLSGY
Ga0150985_1007896972	3300012212	Avena Fatua Rhizosphere	MPVLVRLLACAALFGAVSVSSVPDGEWSQSNADTPATHLPTTNSFSGYIIAVG*
Ga0150985_1020392052	3300012212	Avena Fatua Rhizosphere	MPVLFRLLMCAALFGVLSATTLPSDESASSAATHLPTTNSLSGYIIAVG*
Ga0150985_1042577122	3300012212	Avena Fatua Rhizosphere	MPVLVRLLACAALFGAVSVSSVPEGQWSQSNASTPATHLPTTNSFSGYIIAVG*
Ga0150985_1076320032	3300012212	Avena Fatua Rhizosphere	MPVPVRLLLCAALFGVMGASATPSQEGASTPESHLPTTNSLSGYIIAVG*
Ga0150985_1147188742	3300012212	Avena Fatua Rhizosphere	MPVLVRLLMCAALFGVLSASATPSGQPADESATAATHLPTTNSFSGYIIAVG*
Ga0150985_1165587852	3300012212	Avena Fatua Rhizosphere	MPVLVRLLMCAALFGVLGASATPSGQAADESATAATHLPTTNSFSGYII
Ga0150985_1181248582	3300012212	Avena Fatua Rhizosphere	MPVLVRLLLCAALFGVMGAGATPSQESASTPDSHLPTTNSLSGYIIAVG*
Ga0150985_1199634652	3300012212	Avena Fatua Rhizosphere	MPVLVRLLLCAALFGVLGASATPSQESASTPESHLPTTNSLSGYIIAVG*
Ga0134036_10783241	3300012384	Grasslands Soil	MSLVTMPVVVRLLSCAALFGAVSVNSAPDGQWSQSNASTPATHLPTTNSFSGYIIAVG*
Ga0134036_11469381	3300012384	Grasslands Soil	MPVLVRLLACAALFGAVSVSSAPDGQWSQSSANTPATHLPTTNSFS
Ga0134031_10904411	3300012388	Grasslands Soil	MPVLVRLLACAALFGAVSVSSAPDGQWSQSSANTPATHLPTTNSF
Ga0134056_11967191	3300012397	Grasslands Soil	MSRVTMPVLVRLLACAALFGAVSVSSVPEGQWSQSNASTPATHLPTTNSFSGYIIAVG*
Ga0134041_11361161	3300012405	Grasslands Soil	MSLVTMPVVVRLLSCAALFGAVSVSSAPDGQWSQSNASTPATYLPTTNSFSGYIIAVG*
Ga0134041_11716671	3300012405	Grasslands Soil	MPVLVRLLMCAALFGVLSASTLPSEESASNAATHLPTTNSLSGYIIAVG*
Ga0150984_1027841552	3300012469	Avena Fatua Rhizosphere	MSRVNLPVLARLLLCAALFGVMGASVTPSQESAGTPESHLPTTNSLSGYIIAVG*
Ga0150984_1103405711	3300012469	Avena Fatua Rhizosphere	MSHVTMPVLVRLLACAALFGAVSVSSVPEGQWSQSNASTPATHLPTTNSFSGYIIAVG*
Ga0150984_1122463771	3300012469	Avena Fatua Rhizosphere	MPVLVRLLLCAALFGVMGASATPSQESASTPDSHLPTTNSLSGYIIAVG*
Ga0150984_1209264341	3300012469	Avena Fatua Rhizosphere	MARLLLCAALFGVMGASATPSQEGASTQESHLPTTNSLS
Ga0164298_105024181	3300012955	Soil	SSINLLSNPTEARSMSRVTMPVLVRLLMCAALFAVLGASASPSTQWAHEGDSAATHLPTTNSFSGYIIAVG*
Ga0164303_114876131	3300012957	Soil	MPVLVRLLMCAALFAVVSASTNPSSQWSYEGANSAATHLPT
Ga0164302_107453042	3300012961	Soil	MPVLVRLLMCAALFAVLGASASPSSQCSQEGDSAATHLPTTNSFSGYIIAVG*
Ga0164302_114267321	3300012961	Soil	MSRVTMPVLVRLLTCAALFAVMSASASPSSNEGDSAATHLPTTNSFSGYIIAVG*
Ga0164304_106173361	3300012986	Soil	MPVLSRLLLCAALFGVLGASTTPSQESASTPESHLPTTNSLSGYIIAVG*
Ga0164304_107459111	3300012986	Soil	MPVLVRLLMCAALFAVLGASASPSSQWSHEGDSAATHLPTTNSFSGYIIAVG*
Ga0164305_106034252	3300012989	Soil	MPVLVRLLMCAALFAVLGASASPSTQWSHEGDAAATHLPTTNSFSGYIIAVG*
Ga0157371_109899182	3300013102	Corn Rhizosphere	PVLVRLLLCAALFGALGASATPSSESASTPESHLPTTNSLSGYIIAVG*
Ga0157369_102366062	3300013105	Corn Rhizosphere	MPVLVRLLLCAALFGVLGASVTPSQESASTPESHLPTTNSLSGYIIAVG*
Ga0157369_106154392	3300013105	Corn Rhizosphere	MPVLVRLLLCAALFGVLGASATPSQESAGTPESHLPTTNSLSGYIIAVG*
Ga0157369_125249962	3300013105	Corn Rhizosphere	MPVLVRLLLCAALFGALSASATPSGQAAYESASMPDGHLPTTNSLSGYIIAVG*
Ga0157374_104589262	3300013296	Miscanthus Rhizosphere	MPGLVRLLLCAALFGALSASATPSGQAAYESASMPDGHLPTTNSLSGYIIAVG*
Ga0157372_133821461	3300013307	Corn Rhizosphere	MPVLVRLLLCAALFGVLSASATPSGQAAYESASMPDGHLPTTNSLSGYIIAVG*
Ga0182000_100141762	3300014487	Soil	MSRVTMPVLVRLLMCAALFGVLGASTAPSAQWAQESASMPGSHLPTTNSFSGYIIAVG*
Ga0066667_104993782	3300018433	Grasslands Soil	MFRTTMPVLVRLLMCAALFAVLGVSASPSSQWSHEGNSAATHLPTTNSFSGYIIAVG
Ga0206356_106968782	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVTMPVLVRLLLCAALFGVLGASATPSQESAGTPESHLPTTNSLSGYIIAVG
Ga0206351_102556231	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVNLPVMARLLLCAALFGVLGAATTPSQESANTPESHLPTTNSLSG
Ga0206352_106255442	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVNLPVMARLLLCAALFGVLGAATTPSQESANTPESHLP
Ga0213882_102061621	3300021362	Exposed Rock	MSRVTIPVLVRLLLCAALFGVLSATSLQGQSVDESASTPASHLPTTNSFSGYIIAVG
Ga0182009_103656042	3300021445	Soil	MSRVTMPVLVRLLLCAALFGVLGASATPSPESASTPESHLPTTNSLSGYIIAVG
Ga0126371_106051632	3300021560	Tropical Forest Soil	MSRVTMPVLVRLLLCAALVVLGASTTPSSQWSNEGGSSAATHLPTTNSFSGYIIAVG
Ga0242660_10699591	3300022531	Soil	MSRVTMPVLARLLACAALVGVLSVSTMPTDDLSAQGSSSAEHLPTTNSFSGYIIA
Ga0207654_113976001	3300025911	Corn Rhizosphere	MSRVNLPVLVRLLMCAALFGVLGAATTPSQESAGTPESHLPTTNSLSGYIIAVG
Ga0207693_100072083	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSRVTMPVLVRLLMCAALFAVLGASASPSTQWAHEGDSAATHLPTTNSFSGYIIAVG
Ga0207664_100960783	3300025929	Agricultural Soil	MSRLTMPVLVRLLLCAALLGVPSASATHSGQAAYASASMPDSHLPTTNSLSGYIIAVG
Ga0207706_110727192	3300025933	Corn Rhizosphere	SVLVRLLLCAALVGVLGASVTPSQESASTPESHLPTTNSLSGYIIAVG
Ga0207998_10094121	3300025989	Rice Paddy Soil	RLDPMSRVTMPVLVRLLMCAALFGVLGTASQPAWCHAQDQASFPSGKLPIKSSFSGYIIAVG
Ga0207698_120877421	3300026142	Corn Rhizosphere	MSRVTMPVLVRLLLCAALFGALGASATPSSESASTPESHLPTTNSLSGYIIAVG
Ga0209027_10204112	3300026300	Grasslands Soil	MSRVTMPVLVRLLMCAALAGVLSASTEPSQDGASSAATHLPTTNSFSGYIIAVG
Ga0209155_10299721	3300026316	Soil	GSIHMSRVTMPVLVRLLMCAALAGVLSASTEPSQDGASSAATHLPTTNSFSGYIIAVG
Ga0209687_10368472	3300026322	Soil	TTMPVLVRLLMCAALFAVLGVSASPSSQWSHEGNSAATHLPTTNSFSGYIIAVG
Ga0209057_11782891	3300026342	Soil	MSRVTMPVLVRLLMCAALVGVLGAATEPSQDGASSAATHLPTTNSFSGYIIAVG
Ga0209805_13295572	3300026542	Soil	MPVLVRLLMCAALAGVLSASTEPSQDGATSAATHLPTTNSFSGYIIAVG
Ga0268241_100171262	3300030511	Soil	MSRVTMPVLSRLLLCAALFGVMGASATPSQESASMPDSHLPTTNSLSGYIIAVG
Ga0268241_100624972	3300030511	Soil	MSRVHKPVLVRLLMCAALAGVLSASTMPTDQSSVQGGSSVEHLPTTNSFSGYIIAVG
Ga0372943_0002768_1209_1385	3300034268	Soil	MSRVTMPVLVRLLACAALFGAASVSSAPDGQWSQSSASTPTTHLPTTNSFSGYIIAVG
Ga0314780_019081_982_1131	3300034659	Soil	MPVLVRLLTCAALFAVMSASASPSSNEGDSAATHLPTTNSFSGYIIAVG
Ga0314782_076656_591_716	3300034661	Soil	MSRVTMPVLVRLLTCAALFAVMSASASPSSNEGDSAATHLPT
Ga0314787_015609_915_1037	3300034665	Soil	MSRVTMPVLVRLLTCAALFAVMSASASPSSNEGDSAATHLP
Ga0314792_025906_1006_1149	3300034667	Soil	MSRVTMPVLVRLLTCAALFAVMSASASPSSNEGDSAATHLPTTNSFSG
Ga0314793_014255_1011_1169	3300034668	Soil	MSRVTMPVLVRLLTCAALFAVMSASASPSSNEGDSAATHLPTTNSFSGYIIAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080370

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences