Metagenome / Metatranscriptome Family F080315

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080315
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	39 residues
Representative Sequence	MPNDEHVAMLARGAAAWNEWRADRDETPDLSRAGLRGL
Number of Associated Samples	98
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.78 %
% of genes near scaffold ends (potentially truncated)	98.26 %
% of genes from short scaffolds (< 2000 bps)	90.43 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.435 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.391 % of family members)
Environment Ontology (ENVO)	Unclassified (33.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.652 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.85% β-sheet: 0.00% Coil/Unstructured: 65.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00805	Pentapeptide	87.83
PF00111	Fer2	1.74
PF07505	DUF5131	0.87
PF00106	adh_short	0.87
PF07690	MFS_1	0.87
PF00496	SBP_bac_5	0.87
PF00296	Bac_luciferase	0.87
PF01527	HTH_Tnp_1	0.87
PF00166	Cpn10	0.87
PF01850	PIN	0.87
PF13817	DDE_Tnp_IS66_C	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	87.83
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.87
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.87
COG4422	Bacteriophage protein gp37	Mobilome: prophages, transposons [X]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.65 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	50.43 %
Unclassified	root	N/A	29.57 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	46.96 %
Unclassified	root	N/A	29.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	46.96 %
Unclassified	root	N/A	29.57 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_107989729	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300004082\|Ga0062384_100269830	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300004092\|Ga0062389_101882648	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300005332\|Ga0066388_105869141	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300005555\|Ga0066692_10963724	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300006046\|Ga0066652_101919604	Not Available	530	Open in IMG/M
3300006175\|Ga0070712_100530712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	990	Open in IMG/M
3300006175\|Ga0070712_100792673	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300006175\|Ga0070712_101280477	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300007265\|Ga0099794_10280626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300009088\|Ga0099830_11465031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300009089\|Ga0099828_11363040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300009137\|Ga0066709_102871045	Not Available	637	Open in IMG/M
3300009143\|Ga0099792_10249928	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300010048\|Ga0126373_10559580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1192	Open in IMG/M
3300010358\|Ga0126370_12336092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300010359\|Ga0126376_10194725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1673	Open in IMG/M
3300010359\|Ga0126376_13218363	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300010361\|Ga0126378_11046847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	919	Open in IMG/M
3300010376\|Ga0126381_100776170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1375	Open in IMG/M
3300010376\|Ga0126381_102871106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	687	Open in IMG/M
3300010376\|Ga0126381_104287449	Not Available	552	Open in IMG/M
3300010398\|Ga0126383_12359846	Not Available	617	Open in IMG/M
3300011120\|Ga0150983_10569356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	759	Open in IMG/M
3300011271\|Ga0137393_11710047	Not Available	518	Open in IMG/M
3300012582\|Ga0137358_10368762	Not Available	972	Open in IMG/M
3300012685\|Ga0137397_10830357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300012922\|Ga0137394_10352616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1256	Open in IMG/M
3300012923\|Ga0137359_11292544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300012927\|Ga0137416_12208579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300012971\|Ga0126369_10651010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1128	Open in IMG/M
3300012984\|Ga0164309_11571375	Not Available	563	Open in IMG/M
3300016341\|Ga0182035_10214543	Not Available	1532	Open in IMG/M
3300016341\|Ga0182035_11780659	Not Available	557	Open in IMG/M
3300016371\|Ga0182034_10029544	All Organisms → cellular organisms → Bacteria	3403	Open in IMG/M
3300016422\|Ga0182039_10888258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	795	Open in IMG/M
3300016445\|Ga0182038_10808296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300020579\|Ga0210407_10847545	Not Available	703	Open in IMG/M
3300020580\|Ga0210403_10610169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880	Open in IMG/M
3300020580\|Ga0210403_11028143	Not Available	643	Open in IMG/M
3300020582\|Ga0210395_10969784	Not Available	630	Open in IMG/M
3300021088\|Ga0210404_10292310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300021168\|Ga0210406_10875456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	677	Open in IMG/M
3300021178\|Ga0210408_11231941	Not Available	570	Open in IMG/M
3300021180\|Ga0210396_11009551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	704	Open in IMG/M
3300021403\|Ga0210397_11124994	Not Available	610	Open in IMG/M
3300021405\|Ga0210387_10766516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300021405\|Ga0210387_10929019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300021406\|Ga0210386_11259918	Not Available	624	Open in IMG/M
3300021432\|Ga0210384_11625844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300021478\|Ga0210402_10384080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1304	Open in IMG/M
3300021479\|Ga0210410_11739313	Not Available	517	Open in IMG/M
3300021560\|Ga0126371_13857809	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300021560\|Ga0126371_13943912	Not Available	500	Open in IMG/M
3300022724\|Ga0242665_10117362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300025898\|Ga0207692_10196607	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300025898\|Ga0207692_11113743	Not Available	523	Open in IMG/M
3300025906\|Ga0207699_11112390	Not Available	585	Open in IMG/M
3300025910\|Ga0207684_10693021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	866	Open in IMG/M
3300025915\|Ga0207693_10534303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	915	Open in IMG/M
3300025939\|Ga0207665_10030378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3569	Open in IMG/M
3300026547\|Ga0209156_10130865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1225	Open in IMG/M
3300026547\|Ga0209156_10476817	Not Available	515	Open in IMG/M
3300026551\|Ga0209648_10221776	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300026557\|Ga0179587_10516449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	784	Open in IMG/M
3300027537\|Ga0209419_1099213	Not Available	580	Open in IMG/M
3300027674\|Ga0209118_1185561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300027684\|Ga0209626_1172592	Not Available	573	Open in IMG/M
3300027737\|Ga0209038_10008690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2985	Open in IMG/M
3300027829\|Ga0209773_10467429	Not Available	520	Open in IMG/M
3300027884\|Ga0209275_10319369	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300028906\|Ga0308309_10828832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	803	Open in IMG/M
3300028906\|Ga0308309_11009464	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300028906\|Ga0308309_11236746	Not Available	643	Open in IMG/M
3300029636\|Ga0222749_10554756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300031231\|Ga0170824_109247236	All Organisms → cellular organisms → Bacteria	3469	Open in IMG/M
3300031561\|Ga0318528_10088611	All Organisms → cellular organisms → Bacteria → Proteobacteria	1612	Open in IMG/M
3300031640\|Ga0318555_10049380	All Organisms → cellular organisms → Bacteria	2129	Open in IMG/M
3300031679\|Ga0318561_10052572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2043	Open in IMG/M
3300031680\|Ga0318574_10345167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300031708\|Ga0310686_116619851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300031719\|Ga0306917_10056986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2654	Open in IMG/M
3300031744\|Ga0306918_10266103	All Organisms → cellular organisms → Bacteria → Proteobacteria	1312	Open in IMG/M
3300031747\|Ga0318502_10774570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300031748\|Ga0318492_10184670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300031754\|Ga0307475_10285272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1325	Open in IMG/M
3300031768\|Ga0318509_10863187	Not Available	500	Open in IMG/M
3300031769\|Ga0318526_10247241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300031780\|Ga0318508_1136970	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300031781\|Ga0318547_10603294	Not Available	681	Open in IMG/M
3300031781\|Ga0318547_10890727	Not Available	555	Open in IMG/M
3300031792\|Ga0318529_10229691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300031796\|Ga0318576_10501692	Not Available	572	Open in IMG/M
3300031798\|Ga0318523_10347784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300031823\|Ga0307478_11288411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300031859\|Ga0318527_10015506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2618	Open in IMG/M
3300031890\|Ga0306925_10956580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300031890\|Ga0306925_11314135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	718	Open in IMG/M
3300031890\|Ga0306925_11580653	Not Available	638	Open in IMG/M
3300031897\|Ga0318520_10967200	Not Available	537	Open in IMG/M
3300031910\|Ga0306923_10563794	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300031941\|Ga0310912_10605278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300031947\|Ga0310909_10034570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3778	Open in IMG/M
3300031981\|Ga0318531_10008400	All Organisms → cellular organisms → Bacteria → Proteobacteria	3770	Open in IMG/M
3300032001\|Ga0306922_11862427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300032010\|Ga0318569_10164648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1024	Open in IMG/M
3300032043\|Ga0318556_10428420	Not Available	692	Open in IMG/M
3300032043\|Ga0318556_10644497	Not Available	552	Open in IMG/M
3300032051\|Ga0318532_10162355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300032055\|Ga0318575_10421003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300032076\|Ga0306924_10351761	All Organisms → cellular organisms → Bacteria → Proteobacteria	1689	Open in IMG/M
3300032089\|Ga0318525_10064895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1828	Open in IMG/M
3300032094\|Ga0318540_10441504	Not Available	629	Open in IMG/M
3300032174\|Ga0307470_11439258	Not Available	570	Open in IMG/M
3300032180\|Ga0307471_101817037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.52%
Aquatic	Environmental → Aquatic	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.52%
Freshwater	Environmental → Aquatic → Freshwater	3.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.87%
Loam	Environmental → Terrestrial → Soil → Loam	15.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.48%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.04%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.35%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1079897291	3300000955	Soil	MTKDEYVAALGRGAASWNAWRAEHDEVPDLSSAALRGLDR
Ga0062384_1002698301	3300004082	Bog Forest Soil	MPKDEHVAMLGRGAAAWNAWRAENDETPDLSRAGLRGLDLSGF
Ga0062389_1018826482	3300004092	Bog Forest Soil	MPKDEHVAVLGRGAAAWNAWRVENDETPDLSRAALRGLDLS
Ga0066388_1058691412	3300005332	Tropical Forest Soil	MPKDELVALLGQGAAAWNAWRAAHDETPDLSRTGFRGLNLN
Ga0066692_109637241	3300005555	Soil	MLARGAAVWNEWRATHDEMPNLSRAGLRGIDLSGFDLSRTDLRDA
Ga0066652_1019196041	3300006046	Soil	MKDEYVGLLGRGFGTWNAWRAEHDEVPDLSSANLRALDLSGFDLS
Ga0070712_1005307121	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDEHVARLGHGAAAWDEWRAKLDETPDLSRAGLRGLDLSGF
Ga0070712_1007926731	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDEHVAMLARGAEVWNGWRADYDKTPDLSRAGLRGVDLSGFDLSG
Ga0070712_1012804772	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MANDEHVAMLGHGAAVWNEWRAKSHDTPNLSGAGLR
Ga0099794_102806261	3300007265	Vadose Zone Soil	MPNDEHVAMLGRGAAVWNEWRAKFPVAPDLSRAGLRG
Ga0099830_114650311	3300009088	Vadose Zone Soil	MPKDEHVAVLGRGAAVWSAWPAENDEVPDLSRAGLRGLDLTGF
Ga0099828_113630401	3300009089	Vadose Zone Soil	MPNDDHVAMLGRGADVWNEWRAKHDHAPDLSGAGLRGL
Ga0066709_1028710451	3300009137	Grasslands Soil	MPKNEHVALLGRGAAAWNEWRAGHGKMPDLSRAALRGRDLSGFDLSRRDRG
Ga0099792_102499281	3300009143	Vadose Zone Soil	VPNDDHVAMLGRGAAVWNEWRAKHDDAPDLSGAGLRGLD
Ga0126373_105595801	3300010048	Tropical Forest Soil	MPSDEHVALLRKGTGAWNAWRNERDEAPDLSRAGLRGLDLSG
Ga0126370_123360921	3300010358	Tropical Forest Soil	MPNAEHVAVLRRGAAAWNAWRAESSEAPDLSQAGLR
Ga0126376_101947253	3300010359	Tropical Forest Soil	MPKDEHVAVLGRGAAVWNAWRAEQDEVPDLSQAGLRGFDLTGF
Ga0126376_132183632	3300010359	Tropical Forest Soil	MLRRGAAAWNAWRAENRETPDLPLAGLRGLDLSGFDLSQVDL
Ga0126378_110468471	3300010361	Tropical Forest Soil	MANVDHVELLRRGAAVWNVWRADHDVIPDLSEASLRGLD
Ga0126381_1007761702	3300010376	Tropical Forest Soil	MPNANQIDVLRRGAAAWNAWRAEQDVTPDLSGAGLR
Ga0126381_1028711061	3300010376	Tropical Forest Soil	MPNDEHVAMLRRGAAAWNAWRAENRETPDLPLAGLRGL
Ga0126381_1042874492	3300010376	Tropical Forest Soil	MPNDDHVALLKRGAAAWNAWRAEHDEAPDLSRAGL
Ga0126383_123598461	3300010398	Tropical Forest Soil	MPKDEHVVVLGHGAAVWNAWRAEHDEVPDLSQAALRG
Ga0150983_105693562	3300011120	Forest Soil	MPKDEHVAVLGRGAAVWNTWRAEHDEVPDLSRAALRGLDL
Ga0137393_117100472	3300011271	Vadose Zone Soil	MPNDEDLAMLGCGAAAWNAWRAEHDEAPDLSQAALRG
Ga0137358_103687621	3300012582	Vadose Zone Soil	MANDEHVAMLARGAAVWDKWRADRDETLDLSRASLRG
Ga0137397_108303572	3300012685	Vadose Zone Soil	MPKDEHVALLGRGAAVWNAWRTAHDEVPDLSRAGLRGLDLS
Ga0137394_103526161	3300012922	Vadose Zone Soil	MPKDEHIAVLGRSAAVWNAWRAEHSEVPDLSRAAL
Ga0137359_112925441	3300012923	Vadose Zone Soil	MPKDEHVAVLGRGAAVWNAWRAEHDQVLDLSRAALRG
Ga0137416_122085791	3300012927	Vadose Zone Soil	MPNDEHVAMLGHGAAAWNERRPKHHETPDLSGAGLIWGRPA
Ga0126369_106510102	3300012971	Tropical Forest Soil	MPKDEHVAVLARGAAASNAWRAEHDEAPDLSQAALRG
Ga0164309_115713751	3300012984	Soil	MPNDEHVAMLARGAEVWNAWRADHDESPDLSRAGLR
Ga0182035_102145433	3300016341	Soil	MPNDEHVALLVQGATAWNEWRAKFDGTLDLSRAGL
Ga0182035_117806591	3300016341	Soil	MLGRGAAAWNAWRAEQDETPDLPRAGLRGLDLSGFDL
Ga0182034_100295441	3300016371	Soil	MADDELLAALQRGAAAWNARRAEHAEAPDLSGASLRGLDL
Ga0182039_108882581	3300016422	Soil	MPKDEHVAVLARGAAAWSAWRAKRNEAPDLSQAALRG
Ga0182038_108082961	3300016445	Soil	MPNDEHVILLRRGADAWSSWRAERDDTPDLSQASLRGLDLSGFDFTRAD
Ga0210407_108475452	3300020579	Soil	MPNDEHVVMLAREAAAWNEWRADHDETPDLSRLACEGSI
Ga0210403_106101692	3300020580	Soil	MATDEHVAMLARGAEVWNGWRADHNETPDLSRAGLRGLD
Ga0210403_110281431	3300020580	Soil	MPNDEHVAMLARGAAAWNEWRADRDETPDLSRAGLRGL
Ga0210395_109697841	3300020582	Soil	MPNDEHVARLGHGAAAWDEWRAKLDETPDLSRAGLRGLDLSG
Ga0210404_102923101	3300021088	Soil	MPNDEHVAMLAWGAEVWNGWRADHDETPELSRAGVRGCDLSGFDLSSADL
Ga0210406_108754562	3300021168	Soil	MANDEHVAMLARGAAASNEWRANRDETPDLSRAGLRGLDLSGFD
Ga0210408_112319412	3300021178	Soil	MPKDEHVAVLGRGAAVWNAWRAEHDEVPDLSRAGLRGL
Ga0210396_110095511	3300021180	Soil	MANDEHVAMLGRGATVWNEWRATHDEMPDLSRAGLRGLD
Ga0210397_111249941	3300021403	Soil	MPNDEHVAMLARGAAAWNEWRADRDETPDLSRAGL
Ga0210387_107665161	3300021405	Soil	MPNDEHVAMLARGTAVWNEWRAKSHDTPNLSGAGLR
Ga0210387_109290191	3300021405	Soil	MANDEHVSVLGRGAAAWNEWRADRDEMPDLSRAGL
Ga0210386_112599182	3300021406	Soil	MPNDEHVAMLARGAAAWNEWRADRDETPDLSRAGLVYAGL
Ga0210384_116258442	3300021432	Soil	MPKDEHVAVLGRGAAVWNAWRAEHDESPDLSRAGLRG
Ga0210402_103840804	3300021478	Soil	MPKDEHIAVLGRGAAAWNAWRAEHDEAPDLSRAPLR
Ga0210410_117393132	3300021479	Soil	MPNDEHVAMLARGTAVWNEWRAKSHDTPNLSGAGLRGLDLSGF
Ga0126371_138578092	3300021560	Tropical Forest Soil	MPSDEHVALIRKGATAWNVWRNERDEAPDLSRAGLRGLDLSGFNLSRADLQ
Ga0126371_139439122	3300021560	Tropical Forest Soil	MSNDDHVGLLKRGAAAWNAWRGEHDEAPDLSRAGL
Ga0242665_101173622	3300022724	Soil	MPKDEHVAVLGRGAAVWNAWRAEHDESPDLSRAGLRGLDL
Ga0207692_101966071	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MPNHEHVAMLARGTAAWNEWRADRDETPDLSRAGLRG
Ga0207692_111137431	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MANDEHVAMLGRGAKVRNDWPATHDEMPNLSRAGLRGLDLSGFDVSRA
Ga0207699_111123902	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MANDEHVAMLGRGAAAWNEWRTDRDKTPDLSRAGLR
Ga0207684_106930211	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTKDEYVGLLGLGIAAWNAWRAEHDEVPDLSSANLR
Ga0207693_105343032	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPNDEPIAILARGAAAWNAWRADRDETPDLSRAGLRG
Ga0207665_100303781	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MANDEHVAMLGRGAKVRNDWPATHDEMPNLSRAGLRGLDLSGFDVSRADLRG
Ga0209156_101308652	3300026547	Soil	MANDEHVTMLGRGVTMWNEWRATHEEMPDLSRAGL
Ga0209156_104768172	3300026547	Soil	MPKDEHVAVLGRGATVWNAWRAEHDQVPDLSRAALRG
Ga0209648_102217763	3300026551	Grasslands Soil	MPNDEHVAMLARGAAAWNEWRAKDDEAPDLSRAGLRGLDL
Ga0179587_105164491	3300026557	Vadose Zone Soil	MPNDEHVAMLGRGAAVWNEWRAKFPVASELSRAGLRGLDLSGYDL
Ga0209419_10992132	3300027537	Forest Soil	MPNDEHVVMLGRGATVWNEWRATHDEMPDLSRAGLRGLDLSGF
Ga0209118_11855612	3300027674	Forest Soil	MPNDDHVAMLGRGAAVWNEGRAKHDDAPDLSGAGLRGLDLSGFDLSR
Ga0209626_11725922	3300027684	Forest Soil	MPNDEQVAMLGRGAAVWNAWRAEHDEAPDLSRAAL
Ga0209038_100086905	3300027737	Bog Forest Soil	MPKDEHVAMLGRGAAAWNARRAEKGETPDLSRAGLRGLDLSGFD
Ga0209773_104674291	3300027829	Bog Forest Soil	MPNDEHVVMLARGAAAWNEWRADRDETPDLSRAGLRGL
Ga0209275_103193693	3300027884	Soil	MPNDEHVAMLARGAEVWNGWRADHDETPDLSRAGV
Ga0308309_108288321	3300028906	Soil	MPNDEHVAMLARGAAAWNEWRAKDDEAPDLSRAGLRGLD
Ga0308309_110094641	3300028906	Soil	MPNDEHVAMLARGAEVWNEWRAEQDERADLSLASLRGLDLRGFCLS
Ga0308309_112367462	3300028906	Soil	MANDEHVVMLARGAEVWNGWRADHNETPDLSRAGLRGLEL
Ga0222749_105547562	3300029636	Soil	MPKDEHVAVLGLGAAAWKAWRAEHDEVPDLSRAGLRGLDL
Ga0170824_1092472361	3300031231	Forest Soil	MPKDEHIAVLSRGAATWSAWRAEHSEVPDLSRGALRGL
Ga0318528_100886111	3300031561	Soil	MPNDEHVILLRRGADAWNSWRAERDDTPDLSQASLR
Ga0318555_100493801	3300031640	Soil	MSNDEHLAVLRRGVAAWDAWRAQHDDAPDLSRAGLRGLD
Ga0318561_100525725	3300031679	Soil	MPDDEHVAVLRRGAAEWNAWRAEHDQTPDLSRAGLRG
Ga0318574_103451671	3300031680	Soil	MSNDEHLMLLRRGADEWNSWRAERDDTPDLSQAGLRGLDLSGF
Ga0310686_1166198512	3300031708	Soil	MPKDEHISVLGSGAAVWNEWRAKHDETPELSRAGL
Ga0306917_100569862	3300031719	Soil	MANDEHVAMLGRGAAAWNEWRAKVDETPDLSRPVCAGSI
Ga0306918_102661033	3300031744	Soil	MPNDEHLAVLQRGVAAWDAWRAEHDEAPDLSRAGLRGL
Ga0318502_107745702	3300031747	Soil	MPNDEHVAMLGRGAAAWNAWRAEQDETPDLPRAGLR
Ga0318492_101846702	3300031748	Soil	MPNEAHVAVLRRGAAAWNAWRTEHEEAPDLSRAGLR
Ga0307475_102852721	3300031754	Hardwood Forest Soil	VPKNEHVALLGRGAAAWNAWRAENGEVPDLSRAAL
Ga0318509_108631871	3300031768	Soil	MADDELLAALQRGAAAWNTRREEHDEAPDLSGAGLRGLDLSGFDLSRA
Ga0318526_102472412	3300031769	Soil	MADDEHLAVLRRSAAAWNAWRATHDEGPDLSRAGL
Ga0318508_11369703	3300031780	Soil	MPNDEHVALLRRGSAAWNAWRAEREETPDLSRAGLRG
Ga0318547_106032941	3300031781	Soil	MPKDEHVAVLARGAAAWSAWRAKRNEAPDLSQAALRGL
Ga0318547_108907271	3300031781	Soil	MSNDEHLMLLRRGADEWNSWRAERDDTPDLSQAGLRGLD
Ga0318529_102296911	3300031792	Soil	MADDELLAALQRGAAAWNARRAERDEAPDLSGTGLRGLDLSGFDLSR
Ga0318576_105016921	3300031796	Soil	MPNEAHVAVLRRGAAAWNAWRTEHEEAPDLSRAGLRGL
Ga0318523_103477842	3300031798	Soil	MPNDEHLMLLRRGAGAWNSWRAERNETPDLSQAGLRGLDLSG
Ga0307478_112884111	3300031823	Hardwood Forest Soil	MPNDEHVAMLARGAEVWNGWRADHDETPDLSRAGVRGCDLSGF
Ga0318527_100155061	3300031859	Soil	MPDEEHLAVLRRGVAEWGDWRVEHDQAPDLSRASLRG
Ga0306925_109565801	3300031890	Soil	MANDELLAALQRGAAAWNARRAEHDEAPDLSGASLRGLD
Ga0306925_113141351	3300031890	Soil	MSNDEHVAMLGRGAAAWNKWRAEQDETPDLSRAGLRGL
Ga0306925_115806532	3300031890	Soil	MPDDEHLAVLRRGAAVWNAWRTMHEEAPDLSRAGLRGLDL
Ga0318520_109672002	3300031897	Soil	MLNDEHVAMLGRGAVAWNEWRADRDETPDVSRAGLRGLDLSGF
Ga0306923_105637941	3300031910	Soil	MPNDDHVAMLGRGAAAWNAWRTAHRESPDLSRAGLRGLD
Ga0310912_106052781	3300031941	Soil	MPNDEHVAMLGRGAAARNARCAERNETPDLPRAGLRGLDLSG
Ga0310909_100345701	3300031947	Soil	MPNDEHVILLRRGADAWNSWRAERDDTPDLSQASLRGLDL
Ga0318531_100084005	3300031981	Soil	MANDELLAALQRGAAAWNARRAEHDEAPDLSGASLRGLDLS
Ga0306922_118624271	3300032001	Soil	MSNDEHVAMLGRGAAAWNKWRAEQDETPDLSRAGL
Ga0318569_101646481	3300032010	Soil	MPNDDHVAMLGRGAAAWNAWRTAHRESPDLSRAGLRGLDL
Ga0318556_104284202	3300032043	Soil	MPNDEHVILLRRGAGAWNSWRAERDERPDLSQAGLRGLDLSGYDLF
Ga0318556_106444971	3300032043	Soil	MANDEHVILVQHGAGAWNSWRAERDERPDLSQAGLRGLDL
Ga0318532_101623552	3300032051	Soil	MPNDEHLMLLRRGAGAWNSWRAERNETPDLSQAGLRGLDLSGYD
Ga0318575_104210032	3300032055	Soil	MANDELLAALQRGAAAWNARRAERDEAPDLSGTGLRGLDLSGFD
Ga0306924_103517611	3300032076	Soil	MPNADHIAVLERGAAIWNAWRTEQQETPDLSGVGLRG
Ga0318525_100648951	3300032089	Soil	MADDEHLAVLRRSAAAWNAWRATHDEGPDLSRAGLRGLDL
Ga0318540_104415042	3300032094	Soil	MPKDEHVAVLARGAAAWNAWRAKGDEAPDLSQAALR
Ga0307470_114392582	3300032174	Hardwood Forest Soil	MPKDEHVAVLGRGAAVWNAWRAEHDEVPDLSLAGLRGLD
Ga0307471_1018170372	3300032180	Hardwood Forest Soil	MTTDEHVALLGRGAAVWNEWRADRDETPDLSRAGRRGLDLSGFDL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F080315

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences