NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080226

Metagenome / Metatranscriptome Family F080226

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080226
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 67 residues
Representative Sequence MIRYTLFVLTVLGSAATAIAAIAPSHDMPLANAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV
Number of Associated Samples 98
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 80.00 %
% of genes near scaffold ends (potentially truncated) 21.74 %
% of genes from short scaffolds (< 2000 bps) 89.57 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (55.652 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil
(16.522 % of family members)
Environment Ontology (ENVO) Unclassified
(37.391 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(33.043 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 21.28%    β-sheet: 0.00%    Coil/Unstructured: 78.72%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF04542Sigma70_r2 26.09
PF08281Sigma70_r4_2 8.70
PF10099RskA 2.61
PF11008DUF2846 1.74
PF01165Ribosomal_S21 0.87
PF00731AIRC 0.87
PF02787CPSase_L_D3 0.87
PF08402TOBE_2 0.87
PF07859Abhydrolase_3 0.87
PF02786CPSase_L_D2 0.87
PF14588YjgF_endoribonc 0.87
PF00289Biotin_carb_N 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 26.09
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 26.09
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 26.09
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 26.09
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 0.87
COG0828Ribosomal protein S21Translation, ribosomal structure and biogenesis [J] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A55.65 %
All OrganismsrootAll Organisms44.35 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004020|Ga0055440_10180475Not Available540Open in IMG/M
3300004463|Ga0063356_100075558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium3529Open in IMG/M
3300004643|Ga0062591_100759289Not Available887Open in IMG/M
3300004778|Ga0062383_10139161Not Available1078Open in IMG/M
3300004808|Ga0062381_10275859Not Available610Open in IMG/M
3300005353|Ga0070669_100850370Not Available777Open in IMG/M
3300005440|Ga0070705_100754335Not Available770Open in IMG/M
3300005455|Ga0070663_100386870Not Available1140Open in IMG/M
3300005459|Ga0068867_100890567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria800Open in IMG/M
3300005655|Ga0073905_10017521All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3517Open in IMG/M
3300005657|Ga0073903_10078459All Organisms → cellular organisms → Bacteria → Proteobacteria1556Open in IMG/M
3300005659|Ga0073900_10352935Not Available661Open in IMG/M
3300005833|Ga0074472_10935457Not Available515Open in IMG/M
3300005833|Ga0074472_11449638All Organisms → cellular organisms → Bacteria → Proteobacteria8624Open in IMG/M
3300005844|Ga0068862_100511878All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1141Open in IMG/M
3300006042|Ga0075368_10351088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria642Open in IMG/M
3300006051|Ga0075364_11106141All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria538Open in IMG/M
3300006195|Ga0075366_10618225Not Available672Open in IMG/M
3300009032|Ga0105048_10145097All Organisms → cellular organisms → Bacteria → Proteobacteria2994Open in IMG/M
3300009053|Ga0105095_10426309Not Available733Open in IMG/M
3300009083|Ga0105047_10035115All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales7283Open in IMG/M
3300009778|Ga0116151_10017507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5449Open in IMG/M
3300009795|Ga0105059_1066912Not Available510Open in IMG/M
3300009804|Ga0105063_1027534Not Available714Open in IMG/M
3300009809|Ga0105089_1082333Not Available547Open in IMG/M
3300010166|Ga0126306_10794350Not Available763Open in IMG/M
3300010400|Ga0134122_10209399All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1622Open in IMG/M
3300011395|Ga0137315_1042481Not Available646Open in IMG/M
3300011406|Ga0137454_1022608Not Available861Open in IMG/M
3300011406|Ga0137454_1065706Not Available602Open in IMG/M
3300011407|Ga0137450_1054119Not Available740Open in IMG/M
3300011424|Ga0137439_1007228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1556Open in IMG/M
3300011425|Ga0137441_1077628All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria783Open in IMG/M
3300011428|Ga0137456_1121742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria688Open in IMG/M
3300011433|Ga0137443_1074412Not Available953Open in IMG/M
3300012034|Ga0137453_1009940All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis1349Open in IMG/M
3300012040|Ga0137461_1080017All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria919Open in IMG/M
3300012225|Ga0137434_1003704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1446Open in IMG/M
3300012226|Ga0137447_1029855Not Available896Open in IMG/M
3300012226|Ga0137447_1030640All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria888Open in IMG/M
3300012228|Ga0137459_1180808Not Available620Open in IMG/M
3300014326|Ga0157380_12903154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria546Open in IMG/M
3300014884|Ga0180104_1185097Not Available621Open in IMG/M
3300015249|Ga0180071_1078364Not Available522Open in IMG/M
3300015251|Ga0180070_1016694Not Available838Open in IMG/M
3300015251|Ga0180070_1042364All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria609Open in IMG/M
3300015254|Ga0180089_1035975Not Available948Open in IMG/M
3300015360|Ga0163144_10678751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1082Open in IMG/M
3300018028|Ga0184608_10199833Not Available875Open in IMG/M
3300018051|Ga0184620_10225863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria626Open in IMG/M
3300018063|Ga0184637_10101025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis1776Open in IMG/M
3300018066|Ga0184617_1007580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis2047Open in IMG/M
3300018073|Ga0184624_10510068Not Available522Open in IMG/M
3300018074|Ga0184640_10394999Not Available623Open in IMG/M
3300018077|Ga0184633_10350924Not Available745Open in IMG/M
3300018079|Ga0184627_10156892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1206Open in IMG/M
3300018429|Ga0190272_10372102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1150Open in IMG/M
3300018429|Ga0190272_10440787All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1081Open in IMG/M
3300018429|Ga0190272_12991180Not Available524Open in IMG/M
3300018429|Ga0190272_13246676Not Available507Open in IMG/M
3300018469|Ga0190270_11679404All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria688Open in IMG/M
3300018476|Ga0190274_10983831All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria917Open in IMG/M
3300018481|Ga0190271_11220418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria874Open in IMG/M
3300018920|Ga0190273_11546012Not Available589Open in IMG/M
3300019377|Ga0190264_10734353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria737Open in IMG/M
3300019377|Ga0190264_11235718Not Available624Open in IMG/M
3300019377|Ga0190264_11701389Not Available561Open in IMG/M
3300019487|Ga0187893_10321794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis1089Open in IMG/M
3300022756|Ga0222622_10585222Not Available805Open in IMG/M
3300022756|Ga0222622_11235868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria550Open in IMG/M
3300025167|Ga0209642_10479500Not Available689Open in IMG/M
3300025313|Ga0209431_10192778All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis1612Open in IMG/M
3300025313|Ga0209431_10932202Not Available620Open in IMG/M
3300025324|Ga0209640_10501836Not Available989Open in IMG/M
3300025325|Ga0209341_10937170Not Available642Open in IMG/M
3300025538|Ga0210132_1067511Not Available537Open in IMG/M
3300025847|Ga0209607_1044117Not Available2277Open in IMG/M
3300025908|Ga0207643_10546184Not Available743Open in IMG/M
3300025942|Ga0207689_11563274Not Available550Open in IMG/M
3300026067|Ga0207678_10505181Not Available1054Open in IMG/M
3300026089|Ga0207648_10285355All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1477Open in IMG/M
3300026089|Ga0207648_11762568Not Available581Open in IMG/M
3300027878|Ga0209181_10404592All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1097Open in IMG/M
3300027885|Ga0209450_10909735Not Available629Open in IMG/M
3300028380|Ga0268265_12435870Not Available530Open in IMG/M
3300028786|Ga0307517_10588528Not Available550Open in IMG/M
(restricted) 3300031248|Ga0255312_1091775Not Available739Open in IMG/M
3300031455|Ga0307505_10003330All Organisms → cellular organisms → Bacteria → Proteobacteria10170Open in IMG/M
3300031455|Ga0307505_10161579All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1025Open in IMG/M
3300031730|Ga0307516_10082619All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3054Open in IMG/M
3300031731|Ga0307405_11344101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria623Open in IMG/M
3300031772|Ga0315288_11667675Not Available516Open in IMG/M
3300031834|Ga0315290_10928944Not Available737Open in IMG/M
3300031911|Ga0307412_10681138Not Available880Open in IMG/M
3300031911|Ga0307412_11121544Not Available701Open in IMG/M
3300032002|Ga0307416_101666639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria743Open in IMG/M
3300032002|Ga0307416_103440593Not Available530Open in IMG/M
3300032164|Ga0315283_10066335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Dongia → unclassified Dongia → Dongia sp. URHE00603690Open in IMG/M
3300032420|Ga0335397_10048131All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4705Open in IMG/M
3300033233|Ga0334722_10348139Not Available1075Open in IMG/M
3300033814|Ga0364930_0176453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales728Open in IMG/M
3300033814|Ga0364930_0194637Not Available690Open in IMG/M
3300034126|Ga0370486_078657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria776Open in IMG/M
3300034127|Ga0370489_0176652All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria631Open in IMG/M
3300034128|Ga0370490_0040058All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1547Open in IMG/M
3300034155|Ga0370498_078218All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria755Open in IMG/M
3300034157|Ga0370506_124903Not Available586Open in IMG/M
3300034164|Ga0364940_0056533Not Available1064Open in IMG/M
3300034177|Ga0364932_0225113Not Available711Open in IMG/M
3300034178|Ga0364934_0063705All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aestuariivirgaceae → Aestuariivirga → Aestuariivirga litoralis1369Open in IMG/M
3300034178|Ga0364934_0270575Not Available644Open in IMG/M
3300034257|Ga0370495_0053370All Organisms → cellular organisms → Bacteria → Proteobacteria1222Open in IMG/M
3300034643|Ga0370545_020037Not Available1115Open in IMG/M
3300034690|Ga0364923_0170599Not Available575Open in IMG/M
3300034773|Ga0364936_064215Not Available685Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil16.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.17%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.96%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment6.96%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil4.35%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.35%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere4.35%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment3.48%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater3.48%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.61%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.61%
Activated SludgeEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge2.61%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.74%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.74%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.74%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.74%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza1.74%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.74%
Anaerobic Digestor SludgeEngineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge1.74%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.87%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.87%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.87%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.87%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.87%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.87%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.87%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.87%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004020Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300004808Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1FreshEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005655Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_supernatantEngineeredOpen in IMG/M
3300005657Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_bulkEngineeredOpen in IMG/M
3300005659Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-KitEngineeredOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006195Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1Host-AssociatedOpen in IMG/M
3300009032Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009083Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)EnvironmentalOpen in IMG/M
3300009778Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC117_MetaGEngineeredOpen in IMG/M
3300009795Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50EnvironmentalOpen in IMG/M
3300009804Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40EnvironmentalOpen in IMG/M
3300009809Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011395Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT200_2EnvironmentalOpen in IMG/M
3300011406Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2EnvironmentalOpen in IMG/M
3300011407Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT454_2EnvironmentalOpen in IMG/M
3300011424Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT200_2EnvironmentalOpen in IMG/M
3300011425Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2EnvironmentalOpen in IMG/M
3300011428Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2EnvironmentalOpen in IMG/M
3300011433Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2EnvironmentalOpen in IMG/M
3300012034Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2EnvironmentalOpen in IMG/M
3300012040Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2EnvironmentalOpen in IMG/M
3300012225Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2EnvironmentalOpen in IMG/M
3300012226Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2EnvironmentalOpen in IMG/M
3300012228Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300015249Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293A_16_10DEnvironmentalOpen in IMG/M
3300015251Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT293_16_10DEnvironmentalOpen in IMG/M
3300015254Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10DEnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025167Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025325Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025538Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025847Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Hong Kong - AD_UKC117_MetaG (SPAdes)EngineeredOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027878Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028786Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EMHost-AssociatedOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032420Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033814Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17EnvironmentalOpen in IMG/M
3300034126Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_16EnvironmentalOpen in IMG/M
3300034127Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16EnvironmentalOpen in IMG/M
3300034128Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16EnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M
3300034157Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M
3300034177Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M
3300034257Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17EnvironmentalOpen in IMG/M
3300034643Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034690Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17EnvironmentalOpen in IMG/M
3300034773Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0055440_1018047523300004020Natural And Restored WetlandsMIRYTLFVLTVLGTAATAIAAVHPATSSTLGNPNNVTVLLKNQAFPVYGPIAVEKCAKEDCSDVQS*
Ga0063356_10007555863300004463Arabidopsis Thaliana RhizosphereRYTFFVLTVLGSAATAIAAITPASDMPLANARNVTVIEMNQAFPVYGPIVVEKCAVENCSDVEA*
Ga0062591_10075928913300004643SoilMIRYTLFVLIVLGSAATAIAAIAPNNDMPLAGSKNVTVIEMNQDFPVYGPIVVEQCAVEDCSDVKA*
Ga0062383_1013916123300004778Wetland SedimentMARYSLFVLLVIGSAATAIAAIAPDRSIPLTGRNVTVIEKNQAFPVLGPVVVEQCASEDCSDFRG*
Ga0062381_1027585923300004808Wetland SedimentMIRYTLFVLTIIGSAATAIAAIAPNHELVPARNVTIIDKNQAFPVYGPIVVEQCAVEDCSDVEQG*
Ga0070669_10085037013300005353Switchgrass RhizosphereMLVPRSEHTRGNHTMIRYTLFVLIVLGSAATAIAAIAPNNDMPLAGSKNVTVIEMNQDFPVYGPIVVEQCAVEDCSDVKA*
Ga0070705_10075433513300005440Corn, Switchgrass And Miscanthus RhizosphereMIRYTLFVLTVLGSAATAIASIAPNHDMPVAGSKNVTVIEMNQAFPVYGPIVVEQCAVEDCSDVEV*
Ga0070663_10038687013300005455Corn RhizosphereMIRYTFFVLTVLGSAVTAIAAIAPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVKA*
Ga0068867_10089056713300005459Miscanthus RhizosphereMIRYTLFVLIVLGSAATAIAAIAPNNDMPLAGSKNVTVIEMNQDFPVYGPIVVEQCAVEDCSDVKA*SNCPAQSA
Ga0073905_1001752153300005655Activated SludgeMIRYTFFVLTVLGSAATAIAAIAPASDMPSANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSDAKA*
Ga0073903_1007845913300005657Activated SludgeTFFVLTVLGSAATAIAAIAPASDMPSANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSDAKA*
Ga0073900_1035293513300005659Activated SludgeMIRYTFFVLTVLGSAATAIAAIAPASDMPSANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSD
Ga0074472_1093545713300005833Sediment (Intertidal)MIRYSLFVLTTLATAAAAIAAIAPAHEQIDPTAKNVTVIEKNQAYPAYGPIVVEQCAAQDCSEVQS*
Ga0074472_1144963883300005833Sediment (Intertidal)MKPVATTLEKTMIRCTLFIPTTLATAASAISAIAPVHKDIDLMARNVTVIEKNQAFPAYRPIVVKDCATKDCSEVRS*
Ga0068862_10051187823300005844Switchgrass RhizosphereMIRYTLFVLIVLGSAATAIAAIAPNNDMPLAGSKNVTVIQMNQDFPVYGPIVVEQCAVEDCSDVKA*
Ga0075368_1035108823300006042Populus EndosphereMIRYTFFVLTVLGSAATAIAAITPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAV
Ga0075364_1110614113300006051Populus EndosphereMIRYTFFVLTVLGSAATAIAAIAPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAVEN
Ga0075366_1061822523300006195Populus EndosphereLTVLGSAATAIAAITPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVKA*
Ga0105048_1014509723300009032FreshwaterMNGTFSLGSSLAQYVGFKIEYTRGNHLMIRYTFFVLTILGSAATAIAAITPSSDMPSANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSDVKV*
Ga0105095_1042630923300009053Freshwater SedimentMIRYTLFVLTVLGSAATAIAAIAPSHDMPMAGSKNVTIIEMNQAFPVYGPIVVEQCAVENCSDVEV*
Ga0105047_1003511553300009083FreshwaterMNGTFSLGSSLAQYVGFKIEYTRGNHIMIRYTFFVLTILGSAATAIAAITPSSDMPSANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSDVKA*
Ga0116151_1001750753300009778Anaerobic Digestor SludgeMIRYAFFVLTVMATAATAIAAVHPTGFEPAQAKGNVTVIEKNSPFPVLGPIIVEECAVEDCSDVQS*
Ga0105059_106691213300009795Groundwater SandMIRYTLFVLTVIGSAATAIASIAPNHDMPVAGSKNVTVIEMNQAFPVYGPIVVEQCAVEDCSDVEV*
Ga0105063_102753413300009804Groundwater SandMIRYTLFVLTVIGSAATAIASIAPNHDMPVAGSKNVTFIEMNQAFPVYGPIVVEQCAVENCSDTEV*
Ga0105089_108233323300009809Groundwater SandMIRYSLFVLTVVATAATAIASIAPTADKVDMMGPNVTVIEKNQAFPVYGPITVEECATEDCSGIRT*
Ga0126306_1079435023300010166Serpentine SoilMIRYTLFILTVLGSAATAIAAIAPASDMPLANAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV*
Ga0134122_1020939923300010400Terrestrial SoilMIRYTLFVLTVLGSAATAIAAIAPNNDMPLAGSKNVTVIEMNQDFPVYGPIVVEQCAVEDCSDVKA*
Ga0137315_104248123300011395SoilMGKLVPRSKHTRGNHTMIRYTLFVLTVLGTAATAIASIAPNHDMPLAGSKNVTVIDMNQAFPVYGPIVVEQCAVENCYDVEA*
Ga0137454_102260823300011406SoilMIRYTLFVLTVLGSAATAIAAIAPSHEMIPANGNFTVIEKNQAFPVYGPIVVEQCAVEDCSDVESAET*
Ga0137454_106570633300011406SoilIRYTFFVLTVLGTAATAIAAIAPNHQAAPTNPNNVTIIEKNQFFPIYGKIIVEPCAVEDCSDVTS*
Ga0137450_105411913300011407SoilMIRYTLFVLTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPIVVEQCAVENCSDVEGTET*
Ga0137439_100722833300011424SoilMIRYTLFVLTVLGSAATAIAAIAPAHDMIPANGNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVEGTET*
Ga0137441_107762823300011425SoilMIRYTLFVLTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVESTET
Ga0137456_112174213300011428SoilMIRYTLFVLTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPIVVEQCAVEDCSDV
Ga0137443_107441223300011433SoilMIRYTLFILTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVEGVET*
Ga0137453_100994033300012034SoilMIRYTLFVLTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPLVVEQCAVENCSDVESTET*
Ga0137461_108001723300012040SoilMIRYTLFVLTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVESTET*
Ga0137434_100370413300012225SoilMIRYTLFVLTVIGSAATAIAAIAPNHDMPLANTRNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV*
Ga0137447_102985523300012226SoilMIRYTFFVLTVLGTAATAIAAIAPNHQAAPTNPNNVTIIEKNQFFPIYGKIIVEPCAVEDCSDVTS*
Ga0137447_103064023300012226SoilMIRYTLFVLTVLGSAATAIASIAPNHDMPLAGSKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVQA*
Ga0137459_118080813300012228SoilMLGSRSKYTRGNHTMIRYTFFVLTVLGSAATAIAAITPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDTEA*
Ga0157380_1290315423300014326Switchgrass RhizosphereMIRYTFFVLTVLGSAATALAAIAPASDMPLPNAKNVTVIEMNQAF
Ga0180104_118509713300014884SoilMKHATVQKKKEKNMIRYTLFLLTVLSGAASAIAAMAPAHEKIDLSAGNVTVIEKNQAFPVFGPIVVEDCAAEDCSELRT*
Ga0180071_107836413300015249SoilMLGSRSKYTRGNHIMIRYTFFVLTVLGSAATAIAAIAPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV*
Ga0180070_101669423300015251SoilVLTVLGSAATAIASIAPNHDMPVAGSKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEA*
Ga0180070_104236423300015251SoilMIRYTLFVLTVLGSAATAIAAIAPAHDMIPANGNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVESTET*
Ga0180089_103597523300015254SoilMIRYTLFVLTVLGSAATAIAAIAPGHEMVPANGNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVEGTET*
Ga0163144_1067875133300015360Freshwater Microbial MatMIRYTFFVLTVLGSAATAIAAITPASDMPLANAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVDA*
Ga0184608_1019983333300018028Groundwater SedimentMIRYTLFVLTVLGSAATAIAAIAPNNDMPSANAKNVTVIEMNQDFPVYGPIVVEQCAVEDCSDVEA
Ga0184620_1022586313300018051Groundwater SedimentMIRYTLFVLTVFGSAATAIAAIAPNHDMPLAGSKNVTVIEMNQDFP
Ga0184637_1010102533300018063Groundwater SedimentMIRYTLFVLTVLGSAATAIAAIAPNHGMTLANSKNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVES
Ga0184617_100758033300018066Groundwater SedimentMIRYTLFLLTVLGSAATAIAAIAPASDMPLANAKNVTVIEMNQAFPVYGPIVVEQCAVENCSEVEV
Ga0184624_1051006813300018073Groundwater SedimentMIRYTLFVLTVLGSAATAIAAITPASDMPLANAKNVTVIEMNQAFPVYGPIVVEQCAVENCSEVEV
Ga0184640_1039499913300018074Groundwater SedimentSVIERRHNMIRYTLFVLTILATAASAIAAMAPAHEDIDLSAGNVTVIEKNQAFPVLGPIVVEDCAVEDCSEVRS
Ga0184633_1035092413300018077Groundwater SedimentMIRYTLFVLTILATAASAIAAMAPAPEDIDLSASNVTVIEKNQAFPVLGPIVVEDCAVEDCSEVRT
Ga0184627_1015689223300018079Groundwater SedimentMIRYTLFVLTVLGSAATAIAAIAPNHDMIPANGRNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVESDQSA
Ga0190272_1037210223300018429SoilMIRYTFFVLTVLGSAATAIAAITPASDMPLPNARNVTVIEMNQAFPVYGPIVVEQCAVENCSEVEV
Ga0190272_1044078723300018429SoilMIRYTLFVLTVLGSAATAIAAIAPNHVMPMAGSKNVTIIEMNQAFPVYGPIVVEQCAVEDCSDTEA
Ga0190272_1299118013300018429SoilMIRYSLFVLTVIATAATGIAAIAPTRQDIDLTARNVTVIEKNQAFPVFGPIEVEDCATEDCSEVHS
Ga0190272_1324667613300018429SoilYVGFKIEYTRGNHIMIRYTFFVLTVLGSAATAIAAIAPANDMPEANSRNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEA
Ga0190270_1167940413300018469SoilMIRYTLFVLTVLGSAATAIAAIAPSHDMPLANAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV
Ga0190274_1098383123300018476SoilMIRYTFFILTVLGSAATAIAAITPASDMPLANARNVTVIEMNQAFPVYGPIIVEQCAVENCSDVKA
Ga0190271_1122041813300018481SoilMIRYTFFVLTVLGSAATAIAAITPASDMPLANARNVTVIEMNQAFPVYGPIVVEKCAVENCSEVEA
Ga0190273_1154601223300018920SoilMIRYTLFVLTVLGSAATAIAAIAPNHDIALANAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVGV
Ga0190264_1073435323300019377SoilMIRYTFFVLTVLGSAATAIAAIAPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDTEA
Ga0190264_1123571813300019377SoilMIRYTLFVLTVLGSAATAIAAIAPNHDMPLANTRNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV
Ga0190264_1170138913300019377SoilMNGTFRFGSGLPRYIGFKIECTRGNHIMIRYTLFLLTVLGSAATAIAAISPASDMPLANARNVTVIEMNQAFPVYGPIVVEQCAVENCSEVEV
Ga0187893_1032179433300019487Microbial Mat On RocksVLGSAATAIAAITPASDMPLANAKNVTVIEMNQAYPVYGPLVVEQCAVEDCSDVEV
Ga0222622_1058522223300022756Groundwater SedimentMNGTFRLGSGLGAYVGFKIEYTRGNHIMIRHTLFLLTVLGSAATAIAAITPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAVENCSEVEV
Ga0222622_1123586813300022756Groundwater SedimentMIRYTLFVLTVFGSAATAIAAIAPANDMPLANAKNVTVIEMNQDFPVYGPIVVEKCA
Ga0209642_1047950023300025167SoilMIRYTLFVLTVLGSAATAIAAIAPNHDMPLANDKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV
Ga0209431_1019277823300025313SoilMIRYTLFVLAVLGSAATAIAAIAPGHEMVPANGNVTVIEKNQAFPVYGPIVVEQCAVENCSDVESVET
Ga0209431_1093220213300025313SoilMIRYTLFVLTTLATAASAISAIAPAHVGIDLSARNVTVIEKNQAFPVYGPIVVEDCATEDCSEVHS
Ga0209640_1050183613300025324SoilMIRYTLFVLTTLATAAAAIAAIAPAHEEIDPAATNVTVIEKNQAFPVHGPIVVEQCATQDCSEVQS
Ga0209341_1093717033300025325SoilLFVLTTLATAATAIAAIAPAHEEIDVTARNVTVIEKNQAFPVYGPIVVEQCATEDCSEVR
Ga0210132_106751123300025538Natural And Restored WetlandsMIRYTLFVLTVLGTAATAIAAVHPATSSTLGNPNNVTVLLKNQAFPVYGPIAVEKCAKEDCSDVQS
Ga0209607_104411733300025847Anaerobic Digestor SludgeMIRYAFFVLTVMATAATAIAAVHPTGFEPAQAKGNVTVIEKNSPFPVLGPIIVEECAVEDCSDVQS
Ga0207643_1054618413300025908Miscanthus RhizosphereMIRYTLFVLIVLGSAATAIAAIAPNNDMPLAGSKNVTVIEMNQDFPVYGPIVVEQCAVEDCSDVKA
Ga0207689_1156327413300025942Miscanthus RhizosphereMIRYTLFVLIVLGSAATAIAAIAPNNDMPLAGSKNVTVIEMNQDFPVYGPIVV
Ga0207678_1050518133300026067Corn RhizosphereMIRYTFFVLTVLGSAVTAIAAIAPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVKA
Ga0207648_1028535533300026089Miscanthus RhizosphereMIRYTLFVLTVLGSAATAIASIAPNHDMPVAGSKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEA
Ga0207648_1176256813300026089Miscanthus RhizosphereHTMIRYTLFVLIVLGSAATAIAAIAPNNDMPLAGSKNVTVIEMNQDFPVYGPIVVEQCAVEDCSDVKA
Ga0209181_1040459213300027878FreshwaterMIRYTFFVLTILGSAATAIAAITPSSDMPSANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSDVKA
Ga0209450_1090973513300027885Freshwater Lake SedimentMIRYTLFVLTILGSAATAIAAIAPSHELVPATNVTVIEKNQAFPVYGPIVVEQCAVEDCSDVEEG
Ga0268265_1243587023300028380Switchgrass RhizosphereMIRYTLFVLTVLGSAATAIASMAPNHDMPVAGSKNVTVIEMNQAFPVYGPIVVEQCAVEDCSDVEV
Ga0307517_1058852813300028786EctomycorrhizaMIRYSFFVLTILGSAATAIAAIAPASDMPLANARNVTIIEMNQAFPVYGPIVVEQCAVENCSDVEA
(restricted) Ga0255312_109177513300031248Sandy SoilMIRYTLFVLTTLATAASAISAMAPVHEDITLMTKNVTVIEKNQAFPVHGPIVVEQCATQDCPEVQS
Ga0307505_1000333013300031455SoilMIRYSFFVLTILGSAATAIAAIAPASDMPPANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSDVEA
Ga0307505_1016157923300031455SoilMIRYTFFVLTVLGSAATAIAAITPANDMPLANAKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV
Ga0307516_1008261943300031730EctomycorrhizaMIRYTFFVLTVLGSAATAIAAITPASDMPLPNAKNVTVIEMNQAFPVYGPIVVEKCAVENCSEVEV
Ga0307405_1134410113300031731RhizosphereMIRYTLFVLTILGSAATAIAAIAPNHDMPLANARNVTVIEMNQAFPVYGPIVVEQCAVENCS
Ga0315288_1166767513300031772SedimentMIRYSFFVLTIIGTAATAIAAIAPKYTPVPKNGANVTVITKNQAFPIYGPIVVEKCAVEDCSDAT
Ga0315290_1092894423300031834SedimentMIRYSFFVLTIIGTAATAIAAIAPKYTPVPKNGANVTVITKNQAFPIYGPIVVEKCAMEDCSDAT
Ga0307412_1068113813300031911RhizosphereMIRYTLFVLTILGSAATAIAAIAPNHDMPLANARNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV
Ga0307412_1112154413300031911RhizosphereMIRYTLFILTVLGSAATAIAAIAPASDMPLPNARNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEV
Ga0307416_10166663913300032002RhizosphereMIRYTFFVLTVLGSAATAIAAITPASDMPLANARNVTVIEMNQA
Ga0307416_10344059313300032002RhizosphereIMIRYTFFVLTVLGSAATAIAAITPASDMPLANARNVTVIEMNQAFPVYGPIVVEKCAVENCSDVEA
Ga0315283_1006633513300032164SedimentMIRYSFFVLTIIGTAATAIAAIAPKYMPVPKNGANVTVITKNQAFPIYGPIVVEKCAVEDCSDAT
Ga0335397_1004813143300032420FreshwaterMIRYTFFVLTILGSAATAIAAITPSSDMPSANAKNVTVIHMNQAFPVYGPMVVEQCAVENCSDVKV
Ga0334722_1034813923300033233SedimentMIRYTLFVLTTLATTAAAIAAIAPAREQVDPTAKNVTVIEKNQAFPVYGPIVVEPCATQDCSEVQS
Ga0364930_0176453_307_5073300033814SedimentMIRYTLFVLTTLATAASTVSAIAPVHEDIDLTAKNITVIEKNQAFPLYGPIVVEGCATEYCSEVRS
Ga0364930_0194637_373_6093300033814SedimentVLYATVEKKEKNMIRYTLFVLTVLASAASAITAISPAHEDLDLSARNITVIEKNQVFPIHGPIIVEGCATEDCSEVRS
Ga0370486_078657_374_6163300034126Untreated Peat SoilMLGSRSKYTRGNHIMIRYTFFVLTVLGSAATAIAAIAPASDMPSANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSDVKA
Ga0370489_0176652_3_1763300034127Untreated Peat SoilMIRYTFFVLTILGTAATAIAAITPNHSAMPTNGLNVTVVQKNQAFPVYGPIVVEQCAV
Ga0370490_0040058_1060_12603300034128Untreated Peat SoilMIRYTFFVLTVLGSAATAIAAIAPASDMPSANAKNVTVIHMNQAFPVYGPIVVEQCAVENCSDVKA
Ga0370498_078218_34_2883300034155Untreated Peat SoilMVKLVSRSKHTRGNHTMIRYTLFILTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPLVVEQCAVENCSDVESTET
Ga0370506_124903_243_4403300034157Untreated Peat SoilMIRYTFFVLTILGTAATAIAAITPNHSAMPTNGLNVTVVQKNQAFPVYGPIVVEQCAVEDCSDVE
Ga0364940_0056533_393_6323300034164SedimentMKHATVRKKKEKNMIRYTLFVLTVLASAASAIAAISPAHEDIDLSARNITVIEKNQVFPIHGPIVVEGCATEDCSEVRS
Ga0364932_0225113_352_5523300034177SedimentMIRYTLFVLTVLGSAATAIAAIAPNHDMPLANSKNVTVIEMNQAFPVYGPIVVEQCAVEDCSDVEV
Ga0364934_0063705_24_1913300034178SedimentLGSAATAIAAIAPNHDMPLANSKNVTVIEMNQAFPVYGPVVVEQCAVEDCSDVEV
Ga0364934_0270575_210_4403300034178SedimentMPIYATVEKNMIRYTLFVLTVLATAASAIAAISPAHEDLDLSARNITVIEKNQIFPIHDPIVVEGCATEDCSEVRS
Ga0370495_0053370_1013_12193300034257Untreated Peat SoilMIRYTLFVLTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPIVVEQCAVENCSDVEGTET
Ga0370545_020037_898_10983300034643SoilMIRYTLFVLTVLGSAATAIAAIAPNHDMPLAGSKNVTVIEMNQDFPVYGPIVVEQCAVEDCSDSEA
Ga0364923_0170599_54_2603300034690SedimentMIRYTLFVLTVLGSAATAIAAIAPAHEMIPANGNVTVIEKNQAFPVYGPLVVEQCAVENCSDVESTET
Ga0364936_064215_198_3983300034773SedimentMIRYTLFVLTVLGSAATAIASIAPNHDMPLAGSKNVTVIEMNQAFPVYGPIVVEQCAVENCSDVEA

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