NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F080131

Metagenome / Metatranscriptome Family F080131

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F080131
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 71 residues
Representative Sequence MTEMLTAEGYEQTKEKLRALETRLAEIEKRTDLDPDHVASVRRSYKMMMREYLQEIKLYEAKQAKQNPLAPA
Number of Associated Samples 90
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 81.74 %
% of genes near scaffold ends (potentially truncated) 18.26 %
% of genes from short scaffolds (< 2000 bps) 87.83 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (51.304 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(20.000 % of family members)
Environment Ontology (ENVO) Unclassified
(25.217 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.609 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.00%    β-sheet: 0.00%    Coil/Unstructured: 45.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF00171Aldedh 4.35
PF00873ACR_tran 2.61
PF10387DUF2442 2.61
PF05685Uma2 2.61
PF01979Amidohydro_1 1.74
PF12811BaxI_1 1.74
PF02806Alpha-amylase_C 1.74
PF00005ABC_tran 1.74
PF01850PIN 1.74
PF07394DUF1501 0.87
PF05118Asp_Arg_Hydrox 0.87
PF13267DUF4058 0.87
PF04851ResIII 0.87
PF04055Radical_SAM 0.87
PF04343DUF488 0.87
PF13570PQQ_3 0.87
PF13466STAS_2 0.87
PF12770CHAT 0.87
PF02463SMC_N 0.87
PF14559TPR_19 0.87
PF02954HTH_8 0.87
PF01909NTP_transf_2 0.87
PF07929PRiA4_ORF3 0.87
PF08676MutL_C 0.87
PF00248Aldo_ket_red 0.87
PF01381HTH_3 0.87
PF00004AAA 0.87
PF03484B5 0.87
PF13633Obsolete Pfam Family 0.87
PF13560HTH_31 0.87
PF07589PEP-CTERM 0.87
PF01624MutS_I 0.87
PF05534HicB 0.87
PF05448AXE1 0.87
PF02687FtsX 0.87
PF13487HD_5 0.87
PF10083DUF2321 0.87
PF04545Sigma70_r4 0.87
PF10518TAT_signal 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 4.35
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 4.35
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 4.35
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 2.61
COG02961,4-alpha-glucan branching enzymeCarbohydrate transport and metabolism [G] 1.74
COG0366Glycosidase/amylase (phosphorylase)Carbohydrate transport and metabolism [G] 1.74
COG1523Pullulanase/glycogen debranching enzymeCarbohydrate transport and metabolism [G] 1.74
COG0072Phenylalanyl-tRNA synthetase beta subunitTranslation, ribosomal structure and biogenesis [J] 0.87
COG0249DNA mismatch repair ATPase MutSReplication, recombination and repair [L] 0.87
COG0323DNA mismatch repair ATPase MutLReplication, recombination and repair [L] 0.87
COG1506Dipeptidyl aminopeptidase/acylaminoacyl peptidaseAmino acid transport and metabolism [E] 0.87
COG1598Antitoxin component HicB of the HicAB toxin-antitoxin systemDefense mechanisms [V] 0.87
COG3189Uncharacterized conserved protein YeaO, DUF488 familyFunction unknown [S] 0.87
COG3458Cephalosporin-C deacetylase or related acetyl esteraseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.87
COG3555Aspartyl/asparaginyl beta-hydroxylase, cupin superfamilyPosttranslational modification, protein turnover, chaperones [O] 0.87
COG4226Predicted nuclease of the RNAse H fold, HicB familyGeneral function prediction only [R] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms51.30 %
UnclassifiedrootN/A48.70 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q01B9F9BNot Available508Open in IMG/M
2189573005|GZGK9D402GMCL0Not Available521Open in IMG/M
3300001199|J055_10237477Not Available649Open in IMG/M
3300005171|Ga0066677_10738816Not Available548Open in IMG/M
3300005172|Ga0066683_10262894Not Available1071Open in IMG/M
3300005174|Ga0066680_10357882Not Available930Open in IMG/M
3300005178|Ga0066688_10701473Not Available643Open in IMG/M
3300005181|Ga0066678_10203176All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300005332|Ga0066388_100565972All Organisms → cellular organisms → Bacteria1764Open in IMG/M
3300005332|Ga0066388_103530509Not Available798Open in IMG/M
3300005332|Ga0066388_105079408Not Available668Open in IMG/M
3300005532|Ga0070739_10042840All Organisms → cellular organisms → Bacteria → Proteobacteria3069Open in IMG/M
3300005534|Ga0070735_10679192Not Available609Open in IMG/M
3300005556|Ga0066707_10326520Not Available1004Open in IMG/M
3300005764|Ga0066903_100172900All Organisms → cellular organisms → Bacteria3165Open in IMG/M
3300006059|Ga0075017_101343170All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300006354|Ga0075021_10974442Not Available552Open in IMG/M
3300006796|Ga0066665_11505258Not Available525Open in IMG/M
3300006800|Ga0066660_10625972All Organisms → cellular organisms → Bacteria896Open in IMG/M
3300007982|Ga0102924_1413696All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium503Open in IMG/M
3300009012|Ga0066710_100146890All Organisms → cellular organisms → Bacteria3271Open in IMG/M
3300009012|Ga0066710_101509057All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1036Open in IMG/M
3300009084|Ga0105046_11318503Not Available556Open in IMG/M
3300009088|Ga0099830_10193401Not Available1589Open in IMG/M
3300009088|Ga0099830_10722603Not Available820Open in IMG/M
3300009090|Ga0099827_10642736Not Available916Open in IMG/M
3300009137|Ga0066709_102161297Not Available768Open in IMG/M
3300009137|Ga0066709_102794301All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia648Open in IMG/M
3300009147|Ga0114129_12075624All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300009147|Ga0114129_13197970Not Available533Open in IMG/M
3300009175|Ga0073936_10376941Not Available880Open in IMG/M
3300009631|Ga0116115_1195596All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes511Open in IMG/M
3300009824|Ga0116219_10165604All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300010341|Ga0074045_10971028Not Available535Open in IMG/M
3300010343|Ga0074044_10172577All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia1442Open in IMG/M
3300010376|Ga0126381_104589875All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium532Open in IMG/M
3300010379|Ga0136449_100160032All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia4389Open in IMG/M
3300010379|Ga0136449_103261691Not Available625Open in IMG/M
3300010379|Ga0136449_104124228Not Available540Open in IMG/M
3300010396|Ga0134126_11920161All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia648Open in IMG/M
3300011269|Ga0137392_10211312Not Available1589Open in IMG/M
3300011269|Ga0137392_11315533All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300011270|Ga0137391_10488800Not Available1043Open in IMG/M
3300011271|Ga0137393_11188522All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300012096|Ga0137389_10066938All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium2766Open in IMG/M
3300012096|Ga0137389_10309947Not Available1337Open in IMG/M
3300012096|Ga0137389_10643720All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium911Open in IMG/M
3300012096|Ga0137389_11509016Not Available568Open in IMG/M
3300012189|Ga0137388_10938880All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium799Open in IMG/M
3300012198|Ga0137364_10810505Not Available707Open in IMG/M
3300012202|Ga0137363_10153121All Organisms → cellular organisms → Bacteria1813Open in IMG/M
3300012202|Ga0137363_11772209Not Available510Open in IMG/M
3300012205|Ga0137362_11263089All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella gemina623Open in IMG/M
3300012205|Ga0137362_11448167Not Available573Open in IMG/M
3300012211|Ga0137377_11639529Not Available566Open in IMG/M
3300012212|Ga0150985_122794184All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia896Open in IMG/M
3300012362|Ga0137361_10057272All Organisms → cellular organisms → Bacteria3242Open in IMG/M
3300012363|Ga0137390_11996522Not Available506Open in IMG/M
3300012469|Ga0150984_112775941All Organisms → cellular organisms → Bacteria953Open in IMG/M
3300012532|Ga0137373_11040082Not Available590Open in IMG/M
3300012923|Ga0137359_10439765All Organisms → cellular organisms → Bacteria1154Open in IMG/M
3300013772|Ga0120158_10094681Not Available1819Open in IMG/M
3300014152|Ga0181533_1135038All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1033Open in IMG/M
3300014161|Ga0181529_10097824All Organisms → cellular organisms → Bacteria1881Open in IMG/M
3300014501|Ga0182024_10617455Not Available1354Open in IMG/M
3300014501|Ga0182024_11376873All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria813Open in IMG/M
3300014838|Ga0182030_11071792Not Available701Open in IMG/M
3300015195|Ga0167658_1053010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria990Open in IMG/M
3300015241|Ga0137418_10737350Not Available749Open in IMG/M
3300015360|Ga0163144_10861795Not Available898Open in IMG/M
3300015374|Ga0132255_105717256Not Available526Open in IMG/M
3300016319|Ga0182033_12227412Not Available500Open in IMG/M
3300016357|Ga0182032_11088768Not Available685Open in IMG/M
3300017929|Ga0187849_1198112All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes785Open in IMG/M
3300017966|Ga0187776_11525123All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia514Open in IMG/M
3300017988|Ga0181520_10130100All Organisms → cellular organisms → Bacteria2086Open in IMG/M
3300018062|Ga0187784_10147237All Organisms → cellular organisms → Bacteria1924Open in IMG/M
3300018062|Ga0187784_11278838Not Available582Open in IMG/M
3300018079|Ga0184627_10651131Not Available522Open in IMG/M
3300020057|Ga0163151_10293128All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300020109|Ga0194112_10150507All Organisms → cellular organisms → Bacteria1970Open in IMG/M
3300020186|Ga0163153_10186748All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300020195|Ga0163150_10095747All Organisms → cellular organisms → Bacteria1898Open in IMG/M
3300021178|Ga0210408_10552750Not Available914Open in IMG/M
(restricted) 3300023177|Ga0233423_10116508All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae1141Open in IMG/M
(restricted) 3300024054|Ga0233425_10017302All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes7161Open in IMG/M
3300026532|Ga0209160_1338595Not Available515Open in IMG/M
3300026551|Ga0209648_10201702All Organisms → cellular organisms → Bacteria1518Open in IMG/M
3300026551|Ga0209648_10238024Not Available1358Open in IMG/M
3300027902|Ga0209048_10622994Not Available717Open in IMG/M
3300029636|Ga0222749_10738111All Organisms → cellular organisms → Bacteria → PVC group539Open in IMG/M
3300031058|Ga0308189_10546060Not Available505Open in IMG/M
3300031234|Ga0302325_11514059Not Available863Open in IMG/M
3300031236|Ga0302324_102053151Not Available715Open in IMG/M
3300031524|Ga0302320_10278501Not Available2254Open in IMG/M
3300031524|Ga0302320_10655911All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes1206Open in IMG/M
3300031564|Ga0318573_10720315Not Available536Open in IMG/M
3300031640|Ga0318555_10509629All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia652Open in IMG/M
3300031708|Ga0310686_112826459Not Available541Open in IMG/M
3300031945|Ga0310913_10392076All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300031965|Ga0326597_11736001Not Available588Open in IMG/M
3300032118|Ga0315277_10254738All Organisms → cellular organisms → Bacteria1874Open in IMG/M
3300032160|Ga0311301_10066820All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium ADurb.BinA1847698Open in IMG/M
3300032160|Ga0311301_11802009All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia729Open in IMG/M
3300032261|Ga0306920_100147186All Organisms → cellular organisms → Bacteria3508Open in IMG/M
3300032261|Ga0306920_103844428All Organisms → cellular organisms → Bacteria → PVC group548Open in IMG/M
3300032456|Ga0335394_10140452All Organisms → cellular organisms → Bacteria2431Open in IMG/M
3300032515|Ga0348332_10325630All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300032515|Ga0348332_13511790Not Available659Open in IMG/M
3300032896|Ga0335075_10023597All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia9011Open in IMG/M
3300032896|Ga0335075_10171969All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium2653Open in IMG/M
3300032896|Ga0335075_10337312All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae1652Open in IMG/M
3300032896|Ga0335075_10337823All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae1650Open in IMG/M
3300032896|Ga0335075_10453668All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → unclassified Gemmataceae → Gemmataceae bacterium1334Open in IMG/M
3300033289|Ga0310914_11180767Not Available667Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.96%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil5.22%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.22%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.35%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.48%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.48%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog2.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.61%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.74%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.74%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.74%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.74%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.74%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.74%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.74%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.74%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.74%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.87%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.87%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion0.87%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.87%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.87%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.87%
LoticEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic0.87%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.87%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.87%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.87%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.87%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.87%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.87%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.87%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.87%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.87%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2189573005Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen)EnvironmentalOpen in IMG/M
3300001199Lotic microbial communities from nuclear landfill site in Hanford, Washington, USA - IFRC combined assemblyEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005532Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009084Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (megahit assembly)EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009175Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaGEnvironmentalOpen in IMG/M
3300009631Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014152Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaGEnvironmentalOpen in IMG/M
3300014161Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300020057Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2EnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020186Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1EnvironmentalOpen in IMG/M
3300020195Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IBEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300023177 (restricted)Freshwater microbial communities from Lake Matano, South Sulawesi, Indonesia - Watercolumn_Matano_2014_112_MGEnvironmentalOpen in IMG/M
3300024054 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MGEnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032118Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032456Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
E41_001927402170459005Grass SoilMKDLLTAEGYEKTKEKLRNLETRLAEIEKRSDLGPSRLASVRRSYAMMMREFLQDIKLYEAKRDKQNPMSPA
FG3_057717902189573005Grass SoilMTEILTAEGCEQTKEKLRDLEKRLAELEKRNDLDPEHLTSVRRSYKMMMRELLRDIKLYEARQAEQMPPTSR
J055_1023747723300001199LoticPVTEVLTSEGYEQTKRKLVELELRLAAIEDRTDLDAEHLASVRRSYKMMMRDYLKEIKLYEAKHSNPNSKSAH*
Ga0066677_1073881623300005171SoilMSESLTAEGYEQTKEKLRDLETRLAEIEKRTDLSPDHLESVRRSYKMMMREFLQEIKLYEAKQGKRKPLASP*
Ga0066683_1026289423300005172SoilMRETLTPEGYQQTKEKLADLERRLGEIEKRTDLKPDHLAGVRRSYKMIMREYLQEIKLYEAKQRKQASGRTGETSSDS*
Ga0066680_1035788223300005174SoilMKEILSPEGYQQTKEKLADLESRLGQIESRTDLDPEHLASVRRSYKMMIREYMQDIKLYEAKRGKQVSKPPA*
Ga0066688_1070147313300005178SoilMRETLTPEGYQQTKEKLADLERRLGEIEKRTDLKPDHLTSVRRSYKMIMREYLQEIKLYEAKQRKQASGRTGETSSDS*
Ga0066678_1020317613300005181SoilMRETLTPEGYQQTKEKLADLERRLGEIEKRTDLKPDHLASVRRSYKMIMREYLQEIKLYEAKQRKQASGRTGETSSDS*
Ga0066388_10056597223300005332Tropical Forest SoilVTEILTAEGYEQTKEKLRDLEARLAEIEKRTDLSPSHLASVRRSYKMMMREYLQDIKLYETRRAKQTPEAPA*
Ga0066388_10353050923300005332Tropical Forest SoilMRELLTAEGYEQTKEKLRDLETRLAEIEQRTDLDPKRLGSVRRSYKMMMREYVQEIKLYEAKHDKRRPVAPA*
Ga0066388_10507940813300005332Tropical Forest SoilMSEVLTAEGYEQTKEKLRDLESRLAEIEKRTDLEPKRLASVRRSYKMMIREFLQDIKLYEAKQSKQNPLKAM*
Ga0070739_1004284023300005532Surface SoilMTELTADGYQQTKEKLRDLEVRLAEMEKRTDLTAEHLASVRRSYKMMMREYLQEIKLYEARQAMQKPMAQA*
Ga0070735_1067919213300005534Surface SoilTREKLADLERRLAEIEKRTDLDPNHLASVRRSYKMVMREYLEDIRLYEAKNAERASTAEGS*
Ga0066707_1032652023300005556SoilMTELLTREGYDQTKVKLADLEKRLGEIERRTDLDLQHLADVRRSYRMIMREYLKEIKLYEAKHRKESP*
Ga0066903_10017290033300005764Tropical Forest SoilVSEILTAEACEQTREKLRDLERRLAEMEKRTDLNPEHMESVRRSYKMMMREFLRDIRLYEAKHGNQKPSTSL*
Ga0075017_10134317013300006059WatershedsSGGDPMREMLTAEGYEQTKEKLRDLETRLAEIEKRTDLSPTRLASVRRSYAMMMREFLQEIKLYEAKRGKQKPMTPA*
Ga0075021_1097444213300006354WatershedsMREMLTAEGYEQTKEKLRDLETRLAEIEKRTDLSPTRLASVRRSYAMMMREFLQEIKLYEAKRGKQKPMTPA*
Ga0066665_1150525823300006796SoilMTELLTAAGYEQTKEKLRDLETRLAEIEKRTDLDPQHLVSVRRSYKMMMREFLQEIKLYEVKQAKQNPLAPG*
Ga0066660_1062597233300006800SoilMTEILTPEGYEQTKEKLADLEHRLGEIEKRTDLNPDHLENVRRSYRMIMRKFLREIKLYEAKHGKQVPTPRT*
Ga0102924_141369613300007982Iron-Sulfur Acid SpringMKELLTPDGYEQTKNKLRDLETRLVELEKRTDLSREHLASVRRSYKMMMREYLQDIKLYEARQAKHNPFPSAP*
Ga0066710_10014689023300009012Grasslands SoilMRETLTPEGYQQTKEKLADLERRLGEIEKRTDLKRDHLAGVRRSYKMIMREYLQEIKLYEAKRRKQASGRTGETSSDS
Ga0066710_10150905733300009012Grasslands SoilVRLTLSADGFHQTKVKLAKLERRLEQIEKRNDLDAEHLASVRRSYKMMMREYLQDIKLYEAKAAL
Ga0105046_1131850323300009084FreshwaterMSEVLTADGYKQTKAKLAILERRLAEIEQRRDIGPEQLASVQRSYGMMIRLYLKEIALYEASQESTKR*
Ga0099830_1019340133300009088Vadose Zone SoilMTELLTAEGYAQTKEKLRDLETRLAAIEKRTDLDPDHLASVRRSYKMMMREFLQEIKLYEAKRPKHYPLTPA*
Ga0099830_1072260323300009088Vadose Zone SoilMNELLTAEGYEQTKEKLRDLESRLAEIDKRTDLSPTRLASVRRSYAMMMREFLQDIKLYEAKRDKQNPMTPA*
Ga0099827_1064273623300009090Vadose Zone SoilMTELRTREGYDQTKVKLADLEKRLGEIERRTDLDPQHLADVRRSYRMVMREYLKEIKLYEAKHGKESPSVER*
Ga0066709_10216129723300009137Grasslands SoilMSEALTAEGYEQTKQKLRDLETRLAEIEKRTDLDPKRLASVRRSYKMMIREYLQDIKLYEAKQTKQNPLTRA*
Ga0066709_10279430123300009137Grasslands SoilMTEMLTAEGYEQTKEKLRALETRLAEIEKRTDLDPDHVASVRRSYKMMMREYLQEIKLYEAKQAKQNPLAPA*
Ga0114129_1207562423300009147Populus RhizosphereMTEMLTPAGYEQTKEKLRDLETRLAELEKRTDLDPEHLASVRRSYKMMKREFLQEIKLYEAKHAKQNPMAP
Ga0114129_1319797023300009147Populus RhizosphereVTEPLTAEGYEQTKEKLADLERRLGELEKRTDLAPEHFASVRRSYKAMMRQYLEEIKLYESKHAPHAPTRKA*
Ga0073936_1037694113300009175Freshwater Lake HypolimnionEQTKEKLHDLEVRLAQIEKRTDLARGHLASVRRSYNMMIREFLQDIRLYEAKHSKPSPPTPV*
Ga0116115_119559613300009631PeatlandMTELLTADGYEQTKEKLHDLEVRLAEIEKRSDLDPEHLASVRRSYKMMMREFLQGMRLYEAKHARPASR*
Ga0116219_1016560413300009824Peatlands SoilMSELLTAEGYEQTKEKLRDLETRLAEIEKRTDLDAEHLASVRQSYKLMVPEYLQDLKLYEARLAKQKPMAQA*
Ga0074045_1097102813300010341Bog Forest SoilMTELLTDDGYEQTKKKLRDLEFRLAEIEKRTDLAPAHLASVKRSYSMMIREFLQEIRLYEAKHAKPSPLTPA*
Ga0074044_1017257723300010343Bog Forest SoilMSESLTPEGYKQTKEKLRDLEARLAEIEKRTDLDAEHLASVRRSYKMMMREYLQDIKLYEARQAKQKPMPQA*
Ga0126381_10458987523300010376Tropical Forest SoilMSELLTAEGYEQTKEKLRDLETRLAEIEKRTDLDAEHLASVCRSYKMMMQEYLQDIKLYEARQAKHKPIAQANQTNPAKG*
Ga0136449_10016003233300010379Peatlands SoilMTELLTAEGYEQTKEKLRDLETRLAEMEKRADLDPDHLASIRRSYKMMMREFLQDIKLYEAKQAKQNPLGPA*
Ga0136449_10326169113300010379Peatlands SoilKEKLRDLETRLAEIEKRSDLAPAHLASVRRSYNMMIRKFLQEIKLYEASQARPSSLTPA*
Ga0136449_10412422823300010379Peatlands SoilVTELLTAEGYEQTKEKLRDLQSRLAEIKKRTDLAPEHLASVRRSYNSVMREYLQEIRLYEVKHAKPSTVAPA*
Ga0134126_1192016113300010396Terrestrial SoilEKLAALERRLAEIEKRTDLPPEHFASVRRSYKMIMREYLQDIKLFESKHGSQISAPRS*
Ga0137392_1021131223300011269Vadose Zone SoilMQEPLTPEGYQQTKEKLADLERRLGEIEKRTDLNPDHLANVRRSYKMMMREYLQEIKLYQAKQR*
Ga0137392_1131553313300011269Vadose Zone SoilMREVLTSEGYQQTKEKLADLQRRLGEIEKRTDLNPDHLASVQRSYKMMMREYLQEIKLYE
Ga0137391_1048880013300011270Vadose Zone SoilMRETLTIEGYEQTKEKLADLERRLAEIEKRTDLDGEHRASVRRSYKMMMREYQQDIKLFEAKHGKQISTPQG*
Ga0137393_1118852213300011271Vadose Zone SoilVLTSEGYQQTKEKLADLQRRLGEIEKRTDLNPDHLASVQRSYKMMMREYLQEIKLYEAKQEKQIPGKAGEGNSQD*
Ga0137389_1006693823300012096Vadose Zone SoilMSEVLTAEGYEQTKLKLRDLETRLAEIEKRTDLDPKRLASVRRSYKMMIREYLQDIKLYEAKQTKQNPLTRA*
Ga0137389_1030994723300012096Vadose Zone SoilMRETLTPEGYQQTKEKLADLQRRLGEIEKRTDLNPDHLASVQRSYKMMMREYLQEIKLYEAKQGKQASGPTDGEFG*
Ga0137389_1064372013300012096Vadose Zone SoilMTEILTKEGYEQTKGKLRDLETRLTEIEKRTDLDPEHLASVRRSYKMMIREYLQDIKIYEAKLVQAESLDAGVT*
Ga0137389_1150901623300012096Vadose Zone SoilVTEILTAEGYEQTKEKLRDLEARLGEIEKRTDLSPSHLASVRRSYKMMMREYLQDIKLYETRQAKQTPEAPA*
Ga0137388_1093888023300012189Vadose Zone SoilMRDLLTAEGYEQTKEKLRDLETRLAEIEKRTDLSPTRLASVRRSYAMMMREFLQDIKLYEAKRGKQNPMTPA*
Ga0137364_1081050523300012198Vadose Zone SoilMRVTLTPEGYQQTKEKLADLERRLGEIEKRTDLKPDHLAGVRRSYKMIMREYLQEIKLYEAKQRKQASGRTGETSSDS*
Ga0137363_1015312133300012202Vadose Zone SoilMRETLTREGYQQTKEKLADLQRRLGEIEKRTDLNPDHLASVQRSYKMMMREYLQEIKLYEAKQGKQASGPTDGEFG*
Ga0137363_1177220923300012202Vadose Zone SoilMRETLTPEGYQQTKEKLADLERRLGEIEKRTDLKPDHLASVRRSYKMIMREYLQEIKLYEARQRK
Ga0137362_1126308923300012205Vadose Zone SoilMTEMLTAKGYEQTKKKLADLERRLEAIDKRTDLDPEHLASVCRSYRAMMRELLREIKLYEAKHGKQESAPTE*
Ga0137362_1144816713300012205Vadose Zone SoilMIEILTAEGYEQTKEKLRDLEMRLAEIEKRTDLSPDHLESVRRSYKMMMREFLKEIKLYETKQGKQEPLKSP*
Ga0137377_1163952923300012211Vadose Zone SoilMTEMLTDAGYEQTKEKLRDLEARLAEIEKRTDLDPEHLASVRRSYRMIMREFLQDIKLYEARQAKQNPMAQT*
Ga0150985_12279418423300012212Avena Fatua RhizosphereMTEILTAEGCEQTKEKLRDLETRWAELEKRTGLDPERLASVRRSYTTMMREFLRDIKLYEARQAREKPSAPA*
Ga0137361_1005727223300012362Vadose Zone SoilMRETLTPEGYQQTKEKLADLERRLGEIEKRTDLKPDHLASVRRSYKMIMREYLQEIKLYEARQRKQASGRTGETSSDS*
Ga0137390_1199652213300012363Vadose Zone SoilLTPEGYQQTKEKLADLERRLGEIEKRTDLNPDHLANVRRSYKMMMREYLQEIKLYQAKQR
Ga0150984_11277594123300012469Avena Fatua RhizosphereMTEMLTPEGYEQTKEKLRDLETRLAEIEKRTDLHPDHMASVRRSYKMIIREYLQEIKLYEASWASKTH*
Ga0137373_1104008223300012532Vadose Zone SoilVTEPLTEEGYQQTKEKLRDLENRLAEIEKRTDLSPKRLASVRRSYTMMIREFLQEIKLYEAKHNHQTSA*
Ga0137359_1043976523300012923Vadose Zone SoilMAEPLTLEGYEQTKEKLYDLEMRLAQLKTRTDLAPEHLASVRRSYAMMMREYLQDIKLYDAKQARQNPMAPA*
Ga0120158_1009468123300013772PermafrostLLTAEGYEQTKEKLRDLESRLEEISNRKDLDVGHLASVRRSYKMMMREYLQDIKLYEARQAKEQPMAQA*
Ga0181533_113503823300014152BogMTAMLNAEGYEQTKEKLRDLETRLVEIEKRTDLAPAHLASVRRSYQMMIREFLQDIRLYEAKLARPSP*
Ga0181529_1009782423300014161BogMTEPLTTEGYEQTKEKLRDLETRLAEIQKRTDLAPAHLASVRRSYNMMIREFLQEIKLYEAKQAKPNPLTPAQ*
Ga0182024_1061745523300014501PermafrostMIETLSAEGYEQTKAKLRDLETRLAEIEKRTDLNPDHLESVRRSYKMMMRKFLKEIKLYEAKQREMESLTYP*
Ga0182024_1137687323300014501PermafrostMIETLTPEGYAQTKKKLRDLEVRLAEIEKRTDLEPEHLVSVRRSYKMMMREFLRDIKLYEAKQDPSTRA*
Ga0182030_1107179223300014838BogMTKLLTTEGYEQTKEKLRDLEMRLAEIEKRTDLAPSHLASVRRSYRMMIREFLQEIKLYEAKLAKPSSMTPA*
Ga0167658_105301023300015195Glacier Forefield SoilMSELLSAAGYEQTKDKLRDLETRLAVIEKRTDLSPSHLASVRRSYKMMMREFLQDIKLYEAKQAKKNSSTST*
Ga0137418_1073735013300015241Vadose Zone SoilMSEVLTAEGYEQTKQKLRDLETRLAEIEKRTDLDPKRLASVRRSYKMMIREYLQDIKLYEAKQTKRNPLTRA*
Ga0163144_1086179523300015360Freshwater Microbial MatMIETLTAEGYEQTKEKLRALEMRLAEIEKRTDLTSDHLESVRRSYTMMMREYLKEIKLYEAKQGKNEPAKAT*
Ga0132255_10571725613300015374Arabidopsis RhizosphereMSEPLTADGYEQTKEKLRDLERRLAEIEKRSDLAPDHLASVRRSYAMMIREYLQDIRLYEAGHHKSDTLPTA*
Ga0182033_1222741223300016319SoilMTEMLTPEGYEQTREKLAALERRLGEIEKRTDLTPEHLESVRRSYRMMMREYLREIKLYEAKHGNQAQAPRE
Ga0182032_1108876823300016357SoilMSELLTAEGYEQTKEKLRDLETRLAAIEKRTDLVPKRLASVRRSYNMMIREFVQDIRLYEVKQGKGNPATPA
Ga0187849_119811223300017929PeatlandMTELLTADGYEQTKEKLHDLEVRLAEIEKRSDLDPEHLASVRRSYKMMMREFLQGMRLYEAKHARPASR
Ga0187776_1152512323300017966Tropical PeatlandMSEILIAEGYDRTKDKLRDLETRLAEIEKRTDLDPKRLPSVRRSFKMMMREFLQDINLYEAKQRGSVLIP
Ga0181520_1013010043300017988BogMTEPLTTEGYEQTKEKLRDLETRLAEIQKRTDLAPAHLASVRRSYNMMIREFLQEIKLYEAKQAKPNPLTPAQ
Ga0187784_1014723713300018062Tropical PeatlandMTKLTSEGYEQTKDKLRDLETRLAEIEKRTDLAPAQLAGVRRSYNMMIREFLQEIKLYETKMAKPSR
Ga0187784_1127883813300018062Tropical PeatlandMTELLTVQGYEQTKEKLRDLEARLAEIEKRKDLNVEHLASVRRSYKMMMREYLQDIKLYEARHAKQQPMAQT
Ga0184627_1065113123300018079Groundwater SedimentMTEILSAAGYEQTKEKLRDLETRLAEIEKRTDLDPEHLASVRRSYKMMMREYLQEIKLYEAKQAKQNPVAPP
Ga0163151_1029312823300020057Freshwater Microbial MatMTATLTPEGYEQTKEKLRDLETRLAAIENRSDLDASHLESVRRSYKMMMREFLKEIKLYEAKQESLRSS
Ga0194112_1015050723300020109Freshwater LakeMTEFLTAEGYEQTKEKLRDLETRLAEIEKRGDLDPEHLASVRRSYKMMMREYLEDIKLYEAKQARQNPLAAR
Ga0163153_1018674823300020186Freshwater Microbial MatMIETLTAEGYEQTKEKLRALEMRLAEIEKRTDLTSDHLESVRRSYTMMMREYLKEIKLYEAKQGKNEPAKAT
Ga0163150_1009574733300020195Freshwater Microbial MatMTATLTPEGYEQTKEKLRDLETRLAAIENCSDLDASHLESVRRSYKMMMREFLKEIKLYEAKQESLRSS
Ga0210408_1055275023300021178SoilMSESLTAEGYEQTKEKLRDLETRLAEIEKRTDLSPDHLESVRRSYKMMMREFLQEIKLYEAKQGKRKPLASP
(restricted) Ga0233423_1011650833300023177FreshwaterYEQTKEKLRDLETRLGKIEKRTDLDPEHLASVRRSYKMMIREFLQDIRLYEAKLAKQNPLTSRQ
(restricted) Ga0233425_1001730233300024054FreshwaterMIDILTADGYQQTKEKLRDLETRLAEIEKRTDLAPEHLASVRRSYKMMMREFLQDIRLYEAKYAKQNPLTPR
Ga0209160_133859523300026532SoilMKEILSPEGYQQTKEKLADLESRLGQIESRTDLDPEHLASVRRSYKMMIREYMQDIKLYEAKRGKQVSKPPA
Ga0209648_1020170233300026551Grasslands SoilGYEQTKEKLHDLEMRLAQLKTRTDLAPEHLASVRLSYAMMMRKYLQEIKLYEARQARQNPMATA
Ga0209648_1023802423300026551Grasslands SoilMSDLLTAEGYEQTKEKLRDLETRLAEIEKRTDLDAEHVASVRRSYKMMMREYLQDIKLYEARQAKEKPMAQA
Ga0209048_1062299413300027902Freshwater Lake SedimentMTELLTPEGYEQTKEKLHGLETRLAEMEKRTDLVPAHLASVRRSYNMMIREFLQEIKVYEAKQARPNPLTPT
Ga0222749_1073811113300029636SoilMTEPLTAEGYEQTKEKLRDLETRLAEIEKRSDLSPDHLQSVRRSYKMMMREFLQEIKLYEAKQGKRKPLASP
Ga0308189_1054606013300031058SoilMTEMLTADGYEQTKEKLRALETRLSEIEKRTDLSPDHVTSVRKSYKMIMRQYLQEIKLYEAKLAKQKPLAPA
Ga0302325_1151405913300031234PalsaMNDLLTADGYEQTKIKLRELETRLVEIEKRRDIDADRLASVRQSYKMMMREYLQDIKLYEAHQSPNDPLTKR
Ga0302324_10205315123300031236PalsaMTEMLTAEGYEQTRVKLRDLETRLAEIEKRTDLDPARLASIRRSYTMMMREFLRDIKLYEAKQGRAVPSHDGKE
Ga0302320_1027850123300031524BogMTEVLTAEGYEQTKEKLRDLQSRLAEIEKRTDLAPAHLASVRRSYNSMIREYLQDIKLYEVKHAKPDTLASA
Ga0302320_1065591123300031524BogMTKLLTTEGYEQTKEKLRDLEMRLAEIEKRTDLAPSHLASVRRSYRMMIREFLQEIKLYEAKLAKPSSMTPA
Ga0318573_1072031513300031564SoilGGDAMRELLTSEGYEQTKVKLRDLEARLAEIEKRSDLSPEHVASVRQSYRMMMREFMQDIKLYEAKTRKQNPSGRG
Ga0318555_1050962913300031640SoilYEQTKEKLRDLEARLAEIEKRTDLSPSHLASVRRSYKMMMREYLQDIKLYETRRAKQTPEAPA
Ga0310686_11282645923300031708SoilMSEILTPAGYEQTKGKLRDLESRLAAIERRTDLAAGHLASVRRSYKMMMREFLQDIKLYEAKQAKKNPSAST
Ga0310913_1039207613300031945SoilVTEILTAEGYEQTKEKLRDLEARLAEIEKRTDLSPSHLASVRRSYKMMMREYLQDIKLYE
Ga0326597_1173600123300031965SoilMTEPLTAAGYERTKEKLRDLETRLADIEKRTDLNPEHLASVQRSYKMVMREFLREIKLYEAKQPKPNPLASN
Ga0315277_1025473833300032118SedimentMSEILTAEGYEQTKEKLRDLETRLVEIAKRTDLHPEHLASVRRSYKMMMREFLEDIKLFEAKQARQNPLAAR
Ga0311301_1006682013300032160Peatlands SoilMSELLTAEGYEQTKEKLRDLETRLAEIEKRTDLDAEHLASVRQSYKLMVPEYLQDLKLYEARLAKQKPMAQA
Ga0311301_1180200923300032160Peatlands SoilVTELLTAEGYEQTKEKLRDLQSRLAEIKKRTDLAPEHLASVRRSYNSVMREYLQEIRLYEVKHAKPSTVAPA
Ga0306920_10014718623300032261SoilVTEILTAEGYEQTKEKLRDLEARLAEIEKRTDLSPSHLASVRRSYKMMMREYLQDIKLYETRRAKQTPEAPA
Ga0306920_10384442823300032261SoilMTEMLTPKGYEQTKGKLADLERRLAAIEKRTDLDPEHLASVRRSYKMIMRELLREIKLYEAKHGKQVPTPRPS
Ga0335394_1014045233300032456FreshwaterSEVLTADGYKQTKAKLAILERRLAEIEQRRDIGPEQLASVQRSYGMMIRLYLKEIALYEASQESTKR
Ga0348332_1032563013300032515Plant LitterELLTAAGYEQTKGKLRDLETRLAIIEKRTDLSPSHQAGVQRSYRMMMREFLRDIKLYEAKKAKKNSSTST
Ga0348332_1351179023300032515Plant LitterMRETLTAEGYEQTKEKLCDLEMRLAAIEKRTDLDPDHLASVRRSYKMMIREFLQDIKLYEAKLLKQNPLTPA
Ga0335075_1002359773300032896SoilMSEILTAEGYEQTKNKLRDLEIRLAEINKRTDLKPEHLASVRRSYKMMMREYLQDIKLYEAKQARRNPTAPA
Ga0335075_1017196913300032896SoilDAMSEMLTAEGYEQTKKKLRDLEIRLAEIEKRTDLSAERLASVRRSYKMMMREFLRDIKLYEAKQARRNPTAPA
Ga0335075_1033731223300032896SoilMTETLTAEGYEQTKEKLRDLETRLAEMEKRTDLDASHLASVRRSYKMIIREFLQEIRLYERRIEC
Ga0335075_1033782323300032896SoilMTEILTPEGYEQTKAKLRDLESRFAEMEQRTDLDAEHLVSVRRSYKMMIREFLQEIKLYERKQAKPNPLTPA
Ga0335075_1045366813300032896SoilMSGILTAEGYQQTKKKLRDLEIRLAELEKRTDLKAEHLASVRRSYKTMMSEFLQDIKLYEAWR
Ga0310914_1118076713300033289SoilMRELLTSEGYEQTKVKLRDLEARLAEIEKRSDLSPEHVASVRQSYRMMMREFMQDIKLYEAKTRKQNPSGRG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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