Metagenome Family F080104

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080104
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	74 residues
Representative Sequence	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEGAPEAF
Number of Associated Samples	101
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	42.73 %
% of genes near scaffold ends (potentially truncated)	93.91 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.217 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.391 % of family members)
Environment Ontology (ENVO)	Unclassified (40.870 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.37% β-sheet: 23.71% Coil/Unstructured: 63.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF12697	Abhydrolase_6	12.17
PF12680	SnoaL_2	6.09
PF13545	HTH_Crp_2	6.09
PF12695	Abhydrolase_5	4.35
PF00903	Glyoxalase	4.35
PF00378	ECH_1	3.48
PF00196	GerE	2.61
PF03819	MazG	2.61
PF12681	Glyoxalase_2	2.61
PF00753	Lactamase_B	1.74
PF03061	4HBT	1.74
PF09084	NMT1	1.74
PF03572	Peptidase_S41	1.74
PF04140	ICMT	1.74
PF05368	NmrA	0.87
PF13345	Obsolete Pfam Family	0.87
PF00282	Pyridoxal_deC	0.87
PF09335	SNARE_assoc	0.87
PF12728	HTH_17	0.87
PF07110	EthD	0.87
PF00067	p450	0.87
PF03372	Exo_endo_phos	0.87
PF00248	Aldo_ket_red	0.87
PF01258	zf-dskA_traR	0.87
PF01027	Bax1-I	0.87
PF00296	Bac_luciferase	0.87
PF01757	Acyl_transf_3	0.87
PF03706	LPG_synthase_TM	0.87
PF07883	Cupin_2	0.87
PF08240	ADH_N	0.87
PF13539	Peptidase_M15_4	0.87
PF13433	Peripla_BP_5	0.87
PF01425	Amidase	0.87
PF03466	LysR_substrate	0.87
PF03734	YkuD	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.74
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	1.74
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.74
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.87
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.87
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.87
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.87
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.87
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.87
COG2124	Cytochrome P450	Defense mechanisms [V]	0.87
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.87
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.22 %
Unclassified	root	N/A	14.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.70 %
Unclassified	root	N/A	14.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.48 %
Unclassified	root	N/A	14.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	42.61 %
Unclassified	root	N/A	14.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	40.00 %
Unclassified	root	N/A	14.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.74 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.87 %
Sporichthyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales	0.87 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.87 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.87 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.87 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.78 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	2.61 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.74 %
Paraconexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.87 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.87 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.87 %
Sporichthyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae	0.87 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.78 %
Solirubrobacterales bacterium 70-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	2.61 %
Paraconexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter	0.87 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.87 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.87 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.87 %
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	0.87 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.87 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.78 %
Solirubrobacterales bacterium 70-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	2.61 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	0.87 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.87 %
unclassified Kitasatospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora	0.87 %
Paraconexibacter antarcticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	0.87 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.87 %
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.87 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	14.78 %
Solirubrobacterales bacterium 70-9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	2.61 %
Kitasatospora sp. MY 5-36	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. MY 5-36	0.87 %
Nakamurella endophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	0.87 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.87 %
Paraconexibacter antarcticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	0.87 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.87 %
Sporichthya	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	0.87 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.87 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.87 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_104306546	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300000956\|JGI10216J12902_113567444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1361	Open in IMG/M
3300001686\|C688J18823_10016960	All Organisms → cellular organisms → Bacteria	4858	Open in IMG/M
3300001686\|C688J18823_10048446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2939	Open in IMG/M
3300001686\|C688J18823_10071239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2411	Open in IMG/M
3300002568\|C688J35102_120867078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1903	Open in IMG/M
3300003267\|soilL1_10074039	All Organisms → cellular organisms → Bacteria	3232	Open in IMG/M
3300004081\|Ga0063454_101140209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	640	Open in IMG/M
3300004153\|Ga0063455_100114022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1150	Open in IMG/M
3300004156\|Ga0062589_100592779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	959	Open in IMG/M
3300005329\|Ga0070683_100517059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300005329\|Ga0070683_101304065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	698	Open in IMG/M
3300005344\|Ga0070661_100631337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300005344\|Ga0070661_101895561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	507	Open in IMG/M
3300005355\|Ga0070671_101165407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	678	Open in IMG/M
3300005365\|Ga0070688_101421762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	563	Open in IMG/M
3300005366\|Ga0070659_100123000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2103	Open in IMG/M
3300005435\|Ga0070714_100878857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	870	Open in IMG/M
3300005455\|Ga0070663_101141274	All Organisms → cellular organisms → Bacteria → Terrabacteria group	683	Open in IMG/M
3300005457\|Ga0070662_101067946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	692	Open in IMG/M
3300005544\|Ga0070686_100979038	All Organisms → cellular organisms → Bacteria → Terrabacteria group	692	Open in IMG/M
3300005546\|Ga0070696_100453902	Not Available	1012	Open in IMG/M
3300005547\|Ga0070693_101245400	Not Available	573	Open in IMG/M
3300005549\|Ga0070704_101029036	All Organisms → cellular organisms → Bacteria → Terrabacteria group	746	Open in IMG/M
3300005564\|Ga0070664_100418518	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300005577\|Ga0068857_101814030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	597	Open in IMG/M
3300005615\|Ga0070702_100171944	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300005718\|Ga0068866_10215114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	1156	Open in IMG/M
3300005842\|Ga0068858_102116938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	556	Open in IMG/M
3300005843\|Ga0068860_101785396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	637	Open in IMG/M
3300005844\|Ga0068862_100563949	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300005937\|Ga0081455_10460957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300006358\|Ga0068871_101713804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	596	Open in IMG/M
3300006755\|Ga0079222_12439013	All Organisms → cellular organisms → Bacteria → Terrabacteria group	524	Open in IMG/M
3300006854\|Ga0075425_102109289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300006954\|Ga0079219_12335464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	518	Open in IMG/M
3300009094\|Ga0111539_12001358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	672	Open in IMG/M
3300009098\|Ga0105245_10392867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	1384	Open in IMG/M
3300009098\|Ga0105245_12433774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	577	Open in IMG/M
3300009148\|Ga0105243_11406652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	718	Open in IMG/M
3300009156\|Ga0111538_13569448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	539	Open in IMG/M
3300009551\|Ga0105238_11597320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300009789\|Ga0126307_11122044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	636	Open in IMG/M
3300010038\|Ga0126315_10095429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1698	Open in IMG/M
3300010044\|Ga0126310_11070144	Not Available	640	Open in IMG/M
3300010360\|Ga0126372_11239469	Not Available	772	Open in IMG/M
3300010371\|Ga0134125_11685406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300010375\|Ga0105239_11855457	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010403\|Ga0134123_10387431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1276	Open in IMG/M
3300011119\|Ga0105246_10738351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300012204\|Ga0137374_10368814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1152	Open in IMG/M
3300012212\|Ga0150985_121818668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	972	Open in IMG/M
3300012355\|Ga0137369_10993080	Not Available	557	Open in IMG/M
3300012505\|Ga0157339_1007015	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300012893\|Ga0157284_10199775	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012915\|Ga0157302_10448318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	545	Open in IMG/M
3300012986\|Ga0164304_11041093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	651	Open in IMG/M
3300013102\|Ga0157371_11534230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	520	Open in IMG/M
3300013105\|Ga0157369_12103915	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300013306\|Ga0163162_10878237	Not Available	1011	Open in IMG/M
3300014325\|Ga0163163_10693181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300014487\|Ga0182000_10116892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	919	Open in IMG/M
3300014488\|Ga0182001_10373704	All Organisms → cellular organisms → Bacteria → Terrabacteria group	609	Open in IMG/M
3300014488\|Ga0182001_10705818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300014745\|Ga0157377_11453341	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300014969\|Ga0157376_12986362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300015372\|Ga0132256_103754382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	511	Open in IMG/M
3300015374\|Ga0132255_103924372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	632	Open in IMG/M
3300018051\|Ga0184620_10079626	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300018482\|Ga0066669_12076911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	535	Open in IMG/M
3300022534\|Ga0224452_1132811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	766	Open in IMG/M
3300025904\|Ga0207647_10492016	All Organisms → cellular organisms → Bacteria → Terrabacteria group	684	Open in IMG/M
3300025925\|Ga0207650_10802972	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300025926\|Ga0207659_11709553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300025927\|Ga0207687_10283632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium 70-9	1328	Open in IMG/M
3300025933\|Ga0207706_10780877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	812	Open in IMG/M
3300025935\|Ga0207709_11240273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300026067\|Ga0207678_10574679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300026067\|Ga0207678_10658681	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300026088\|Ga0207641_10547945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1128	Open in IMG/M
3300026089\|Ga0207648_12236118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	507	Open in IMG/M
3300026118\|Ga0207675_100300902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1562	Open in IMG/M
3300026118\|Ga0207675_102292572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	554	Open in IMG/M
3300026121\|Ga0207683_10248204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1624	Open in IMG/M
3300028380\|Ga0268265_11155914	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300028380\|Ga0268265_12175994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	562	Open in IMG/M
3300028596\|Ga0247821_10437243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	822	Open in IMG/M
3300028721\|Ga0307315_10199425	Not Available	619	Open in IMG/M
3300028771\|Ga0307320_10311740	Not Available	625	Open in IMG/M
3300028778\|Ga0307288_10077342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1184	Open in IMG/M
3300028778\|Ga0307288_10202384	Not Available	765	Open in IMG/M
3300028782\|Ga0307306_10130881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	687	Open in IMG/M
3300028799\|Ga0307284_10376447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	576	Open in IMG/M
3300028811\|Ga0307292_10505240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	518	Open in IMG/M
3300028814\|Ga0307302_10132441	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300028828\|Ga0307312_10744414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	649	Open in IMG/M
3300028872\|Ga0307314_10038278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1167	Open in IMG/M
3300028875\|Ga0307289_10353311	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300028880\|Ga0307300_10184775	Not Available	669	Open in IMG/M
3300028881\|Ga0307277_10076395	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300028881\|Ga0307277_10153887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Sporichthyales → Sporichthyaceae → Sporichthya	998	Open in IMG/M
3300028884\|Ga0307308_10156054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1093	Open in IMG/M
3300028885\|Ga0307304_10405080	Not Available	616	Open in IMG/M
3300031152\|Ga0307501_10023682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella endophytica	1194	Open in IMG/M
3300031995\|Ga0307409_100891203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → unclassified Kitasatospora → Kitasatospora sp. MY 5-36	903	Open in IMG/M
3300031996\|Ga0308176_10516744	Not Available	1215	Open in IMG/M
3300031996\|Ga0308176_11490270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300032002\|Ga0307416_103295620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	540	Open in IMG/M
3300032159\|Ga0268251_10396395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Paraconexibacteraceae → Paraconexibacter → Paraconexibacter antarcticus	596	Open in IMG/M
3300034384\|Ga0372946_0226545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.78%
Host-Associated	Host-Associated	45.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.04%
Plants	Host-Associated → Plants	45.22%
Aquatic	Environmental → Aquatic	1.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.52%
Sediment	Environmental → Aquatic → Sediment	1.74%
Roots	Host-Associated → Plants → Roots	1.74%
Phylloplane	Host-Associated → Plants → Phylloplane	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.78%
Loam	Environmental → Terrestrial → Soil → Loam	13.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.74%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.87%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.22%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.87%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.87%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1043065461	3300000956	Soil	MDDLFIPLWPPMWVEDHALGDEQLVAAGDQVRLMSAVRSDERVLLSVSWPGGRRYLMIDPHGSA
JGI10216J12902_1135674441	3300000956	Soil	MTESAGMDDLLIPLWPPAWVDDHDVSDEQLIDAGEHVKLMSAQRSDQRVLLSVSWPGGRRYLMIDPEGGAAPEAFRAGAPSADTELARAIDAMWSQALRL
C688J18823_100169607	3300001686	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMI
C688J18823_100484461	3300001686	Soil	MDDLFIPLWPPAWLEGHTLGDEQLVAAGDDVKLMTAVRSDERVLLSVSWPGGRRYLMVDPHGDAAAEAFHAGAPSADSDFARSIDAMWSQALR
C688J18823_100712393	3300001686	Soil	MIPLWPPAWVEDHTVSDEQLVEAGDDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPAGSAPPEAFRAGAVSADTDLARSIDAMWSQALRLAKQ
C688J35102_1208670781	3300002568	Soil	MIPLWPPAWVEDHTVSDEQLVEAGDDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPAGSAPPEAFRAGA
soilL1_100740394	3300003267	Sugarcane Root And Bulk Soil	VVGLDTRDYVAMDDLFIPLWPPAWVEGYTLSDEQLVAAGDDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPNGDAAPEAFRAGAXGAEARQADRRRRAAVAR*
Ga0063454_1011402091	3300004081	Soil	MDDLFIPLWPPAWVSEYTLSDEQFVAAAEDVKLMSAARSDERILLSVSWPGGRRYLMIDPHGDAAAEALRAGPTATDPDTARAIDAMWSQAL
Ga0062593_1003393483	3300004114	Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGDEVRLMSALRSDQRVLLSVS
Ga0063455_1001140224	3300004153	Soil	MAGACVPAAWDAQDYVAMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPNGDGPPEAFRAGA
Ga0062589_1005927792	3300004156	Soil	MDDLFIPLWPPAWLEDHTVSDEQIVEAAEDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPTGDAAPEAFRAGATSTDTDTARSIDALWSQALLLA
Ga0070683_1005170592	3300005329	Corn Rhizosphere	MDDLFIPLWPPAWLEDHTVSDEQIVEAAEDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPTG
Ga0070683_1013040651	3300005329	Corn Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEGAPEAFRAGTTSTDADLARSIDAMWSQAL
Ga0070661_1006313371	3300005344	Corn Rhizosphere	MDDLFIPLWPPAWLEDHTVSDEQIVEAAEDVRLMSAVRSDERVLLSVSWP
Ga0070661_1018955611	3300005344	Corn Rhizosphere	MDDIFIPLWPPAWVEDHTLSDEQLVAAGEEVRLMSAQRSDQRVLLSVSWPGGRRYL
Ga0070671_1011654071	3300005355	Switchgrass Rhizosphere	MDDLFIPLWPPPWLEGHTLSDEQLVAAGDEVKLMAAVRSDERVLLSVSWPGGRRYLMIDPHGDAAAEAFRAGDTSTDSDFARSIDAMWSQAL
Ga0070688_1014217622	3300005365	Switchgrass Rhizosphere	MTYASAVAAAATDAQDYVGMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEGAPEAFRAGTTSTDADLARSIDA
Ga0070659_1001230002	3300005366	Corn Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPQGEGAAEAFRAGDLSTDPDLARAIDAM
Ga0070714_1008788573	3300005435	Agricultural Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGDDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEGPPEAFRA
Ga0070663_1011412741	3300005455	Corn Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPG
Ga0070662_1010679461	3300005457	Corn Rhizosphere	LATDAQDYVGMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPQGEGAAEAFRAGDLSTDPDLARAIDAMWS
Ga0070686_1009790382	3300005544	Switchgrass Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMI
Ga0070696_1004539021	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWP
Ga0070693_1012454002	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGR
Ga0070704_1010290361	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSTDA
Ga0070664_1004185181	3300005564	Corn Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEEVRLMSAQRSDQRVLLSVSWPGGRRYLMIDPVGGAAPEAFRAGETSSD
Ga0068857_1018140302	3300005577	Corn Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEGAPEAFRAGTTSTDADLARSIDAM
Ga0070702_1001719443	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGDDVRLMSALRSDQRVLLSVSWPGGRRYLMIDPEGDAAPEAFRAGETS
Ga0068866_102151142	3300005718	Miscanthus Rhizosphere	LATDAQDYVGMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWP
Ga0068858_1021169381	3300005842	Switchgrass Rhizosphere	MRGRLAGPSGAPATGAQDYGGMDDLFIPLWPPGWLEGHTISDEQLVAAGEDVKLMSAVRSDERVLLSLSWPGGRRYLLIDAHGDHAPEAFRAGATSTDPDVARSIDAMWSQALL
Ga0068860_1017853962	3300005843	Switchgrass Rhizosphere	MTYASAVAAAATDAQDYVGMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGDGPPEAFRAGATSTDAGLARSIDAMW
Ga0068862_1005639491	3300005844	Switchgrass Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVRLMSAQRSDQRVLLSVSWPG
Ga0081455_104609572	3300005937	Tabebuia Heterophylla Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSW
Ga0068871_1017138041	3300006358	Miscanthus Rhizosphere	MDDIFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAG
Ga0079222_124390131	3300006755	Agricultural Soil	MDDLFIPLWPPAWLEDHTLTDEQLVTAGEDVKLMSALRSDERVLLSVSWPG
Ga0075425_1021092891	3300006854	Populus Rhizosphere	MRGRLAGPSGAPATGAQDYGCMDDLFIPLWPPAWLEGHTISDEQLVAAGEDVKLMSAVRSDERVLLSLSWPGGRRYLMIDAHGDHAPEAFRAGATSTDPD
Ga0079219_123354642	3300006954	Agricultural Soil	MDDLFIPLWPPQWLEEHTLAEEQLVAAGEDVKLMSALRSDQRVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSTDTDLARSIDAMWSQALH
Ga0111539_120013582	3300009094	Populus Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPQGVGAAEAFRAGELSTDPDLARSI
Ga0105245_103928671	3300009098	Miscanthus Rhizosphere	LATDAQDYVGMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPQGEGAAEAFRAGDLSTDPDL
Ga0105245_124337741	3300009098	Miscanthus Rhizosphere	MTDAQDYVVVDDLFIPLWPPPWVENHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWSGGRRYLMIDPHGDAAPEAFRAGETSTDAGLARSID
Ga0105243_114066521	3300009148	Miscanthus Rhizosphere	MDDLFIPLWPPAWLEGHTISEEQLVAAGEDVKLMSAVRSDERVLLSLSWPGGRRYLMIDAHGDHAPEAFRAGATSTDPDVARSIDAMWSQ
Ga0111538_135694481	3300009156	Populus Rhizosphere	MDDLFIPLWPPAWLEDHTVGDEQIVEAAEDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPTGDAAPEAFRAGATSTDTDTARS
Ga0105238_115973202	3300009551	Corn Rhizosphere	MDDLLIPLWPPAWVDEHDVGDEELIDAGEDVRLMSARRSDQRVLLSVSWPG
Ga0126307_111220442	3300009789	Serpentine Soil	MDDLFIPLWPPAWVEDHTLSDEQFVAAAEDVKLMTAVRSDERVLLSVSWPGGRRYLMIDPHGDSAAEALRA
Ga0126315_100954291	3300010038	Serpentine Soil	MDDLFIPLWPPAWVEDHTLSDEQFVAAAEDVKLMTAVRSDERVLLSVSWPGGRRYLMIDPHG
Ga0126310_110701442	3300010044	Serpentine Soil	MDDIFIPLWPHQWVEDHILSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWPGG
Ga0126372_112394692	3300010360	Tropical Forest Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWP
Ga0134125_116854062	3300010371	Terrestrial Soil	MTDAQDYVVVDDLFIPLWPPPWVENHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWAGGRRYLMIDPHGDAAPEAFRAGET
Ga0105239_118554572	3300010375	Corn Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGDEVRLMSALRSDQRVLLSVSWPGGRRYLMIDPEGGA
Ga0134123_103874311	3300010403	Terrestrial Soil	MTDAQDYVVVDDLFIPLWPPPWVENHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWSGGRRYLMIDPHGDAAPEAFRAGETSTDSDLARSIDAMWSQALH
Ga0105246_107383511	3300011119	Miscanthus Rhizosphere	MDDLFIPLWPPAWLEGHTISEEQLVAAGEDVKLMSAVRSDERVLLSLAWPGGRRYLM
Ga0137374_103688141	3300012204	Vadose Zone Soil	MDDLLIPLWPPAWVESHDVGDEQLIAAGEDVKLMSGVRSDQRVLLSVSWPGGRRYLMIDPEGGAAAEAFRAGSPAADADLARAIDAMWSQALLLA
Ga0150985_1218186682	3300012212	Avena Fatua Rhizosphere	MDDLFIPLWPPAWLEDHTVSDEQIVEASEDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPTGDAAPEAFRAGETSTDTDTARSIDALWSQALLL
Ga0137369_109930801	3300012355	Vadose Zone Soil	MDDLLIPLWPPAWVESHDVGDEQLIAAGEDVKLMSGVRSDQRVLLSVSWSGGWRYLMIDPEGGVAAEAFRAGSPVADADL
Ga0157339_10070151	3300012505	Arabidopsis Rhizosphere	MDDIFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWP
Ga0157284_101997752	3300012893	Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGDEVRLMSALRSDQRVLLSVSWPGGRRYLMIDPEGGAAPEAFRAGATSSDSEL
Ga0157302_104483181	3300012915	Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHG
Ga0164304_110410932	3300012986	Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEEVRLMSALRSDQRVLLSVSWPGGRRYLMIDPDGGAAPEAFRAGETSSDSELARAIDAMWSQALQLA*
Ga0157371_115342301	3300013102	Corn Rhizosphere	MTYASAVAAAATDAQDYVAMDDLFIPLWPPAWVEGHTLGDEQLVAAGEDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGAISTDSDLARAIDAMWSQ
Ga0157369_121039151	3300013105	Corn Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEEVRLMSAVRSDQRVLLSVSWPGGRRYLMIDPEGGAAPAA
Ga0163162_108782371	3300013306	Switchgrass Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSTDAGLARSTDA
Ga0163163_106931811	3300014325	Switchgrass Rhizosphere	MDDLFIPLWPPAWLEDHTVGDEQIVEAAEDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPTGAAAPAAFRAGATS
Ga0182000_101168921	3300014487	Soil	MDDLLIPLWPPAWVDDYELSDEQLVDASEDVKLMSALRSDQRVLLSVSWPGGRRYLMIDPEADAPAEAFRAGSPSE
Ga0182001_103737041	3300014488	Soil	MDDLFIPLWPPAWVENHTLSDEQLVEAAEDVKLMSAIRSDERVLLSVSWPG
Ga0182001_107058181	3300014488	Soil	MDDLFIPLWPPAWVEDHTLSDEQFVAAAEDVKLMTAARSDECVLLSVSWPGGRRYLMIDPHGV
Ga0157377_114533411	3300014745	Miscanthus Rhizosphere	VPRAADAQDYVVMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVRLMSAQRSDQRVLLSVSWPGGRRYLMIDPDGGAAPAAFRAGETSSDAE
Ga0157376_129863622	3300014969	Miscanthus Rhizosphere	MDDLFIPLWPPAWLEGHTISEEQLVAAGEDVKLMSAVRSDERVLLSLSWPGGRRYLM
Ga0132256_1037543822	3300015372	Arabidopsis Rhizosphere	MDDLFIPLWPPAWVEDHTLGDEQMVAAGDDVNLMSAVRSDERVLLSVSWPGGRRYLMIDPRGD
Ga0132255_1039243722	3300015374	Arabidopsis Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVRLMSATRSDQRVLLSVSWPGG
Ga0184620_100796263	3300018051	Groundwater Sediment	MDDLFIPLWPPAWVEEHTLSDEQLVAAGDDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFR
Ga0066669_120769111	3300018482	Grasslands Soil	LQLFDLHPDDDAQDFVVMDDLFIPLWPPAWVEDHALSDERLVAAGDDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPHGGGAAEAFRAGATS
Ga0224452_11328112	3300022534	Groundwater Sediment	MDDLFIPLWPPAWVEDHALSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSADSEFARSIDAMWSQA
Ga0207647_104920161	3300025904	Corn Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDP
Ga0207643_105768502	3300025908	Miscanthus Rhizosphere	MDDLFIPLWPPAWLEDHTVGDEQIVEAAEDVRLMSAVRSDERVLLSV
Ga0207650_108029722	3300025925	Switchgrass Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEGAPEAF
Ga0207659_117095531	3300025926	Miscanthus Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGR
Ga0207687_102836321	3300025927	Miscanthus Rhizosphere	LATDAQDYVGMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPQGEGAAEAFRA
Ga0207706_107808771	3300025933	Corn Rhizosphere	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSTDAGL
Ga0207709_112402731	3300025935	Miscanthus Rhizosphere	MRGRLAGPSGAPATGAQDYGGMDDLFIPLWPPAWLEGHTISEEQLVAAGEDVKLMSAVRSDERVLLSLSWPGGRRYLMIDAHGDHAPEAFRAGA
Ga0207670_104729532	3300025936	Switchgrass Rhizosphere	MDDIFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLL
Ga0207678_105746792	3300026067	Corn Rhizosphere	MDDLFIPLWPPAWLEDHTVGDEQIVEAAEDVRLMSAVRSDERVLLSVSWPGGRRY
Ga0207678_106586811	3300026067	Corn Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGDDVRLMSALRSDQRVLLSVSWPGGRRYLMIDPEGDA
Ga0207641_105479452	3300026088	Switchgrass Rhizosphere	MDDIFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSTDTDLARSIDAMWSQALH
Ga0207648_122361181	3300026089	Miscanthus Rhizosphere	LATDAQDYVGMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPHGEGAAEAFRAGDLSTDPDLARAIDAMWSQAL
Ga0207675_1003009023	3300026118	Switchgrass Rhizosphere	MDDLFIPLWPPAWVEDHTLSDEQLVAAGDDVRLMSALRSDQRVLLSVSWPGGRRYLMIDPDGDAAPEAFRAGETSADPDLA
Ga0207675_1022925722	3300026118	Switchgrass Rhizosphere	MDDLFIPLWPPAWVEDHNLSDEQLVAAGEDVRLMSAQRSDQRVLLSVSWPGGRRYLMIDPDGGAAPEAFRAGETSSDAELARAIDAMWSQALQLA
Ga0207683_102482043	3300026121	Miscanthus Rhizosphere	MDDIFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEGAPEAFRAGTTSTDADLARSIDAM
Ga0268265_111559142	3300028380	Switchgrass Rhizosphere	VPRAADAQDYVVMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVRLMSAQRSDQRVLLSVSWPGGRRYL
Ga0268265_121759941	3300028380	Switchgrass Rhizosphere	LATDAQDYVGMDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDP
Ga0247821_104372431	3300028596	Soil	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSTDAGLARSIDAMWSQALHLA
Ga0307315_101994252	3300028721	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGDDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAG
Ga0307320_103117401	3300028771	Soil	MDDLFIPLWPPAWVEEHTLSDEQLVAAGEDVKLMSAVRSDERVLLSVSWSGGRRYL
Ga0307288_100773421	3300028778	Soil	MDDLFIPLWPPAWVEEHTLSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSADSEFARSIDAMWSQA
Ga0307288_102023843	3300028778	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRR
Ga0307306_101308812	3300028782	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGGA
Ga0307284_103764471	3300028799	Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGGAAKAYRAG
Ga0307292_105052402	3300028811	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGDDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSADSEFA
Ga0307302_101324412	3300028814	Soil	MDDLFIPLWPPAWVEDHTLNDEQLVAAGEDVRLMSAVRSDQRILLSVSWPGGRRYLMIDPHGDGAPAAFRAGALSA
Ga0307312_107444142	3300028828	Soil	MDDLFIPLWPPAWVEDHTLNDEQLVAAGEDVRLMSAVRSDQRILLSVSWPGGRRYLMIDPHGDGAPEAFRAGELSADPDLARAIDAMWS
Ga0307314_100382781	3300028872	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRA
Ga0307289_103533112	3300028875	Soil	MDDLFIPLWPPAWVEDHTLNDEQLVAAGEDVRLMSAVRSDQRILLSVSWPGGRRYLMIDPHGDGAPA
Ga0307300_101847751	3300028880	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRAGETSADSEFA
Ga0307277_100763953	3300028881	Soil	MDDLFIPLWPPPWVEDHTLSDEQLVAAGEDVKLMSAVRSDQRILLSVSWPGGRRYLMIDPHGDGGPEA
Ga0307277_101538871	3300028881	Soil	MDDLFIPLWPPAWVEDHTLSHEQLVAAGDDVKLMSAVRSDQRVLLSVSWPGGRRYLMIDPEGGGAAEAFRAGATSTDSDFARSIDAMWSQAL
Ga0307308_101560542	3300028884	Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGGAAEAYRAGETSTDSELARSIDAMW
Ga0307304_104050802	3300028885	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGDDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGEAAPEAFRA
Ga0247827_103821482	3300028889	Soil	MDDIFIPLWPPAWVEDHTLNDEQLVAAGEDVKLMSALRSDERVLLSVSW
Ga0247827_104795551	3300028889	Soil	MDDLFIPLWPPAWVEEHTLSDEQLVAAGEDVRLMSALRSDQRVLLSV
Ga0307501_100236823	3300031152	Soil	MDDLFIPLWPPAWVEDHALSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPDGGAAA
Ga0307409_1008912032	3300031995	Rhizosphere	MVDVDARDYVAMDDIFIPLWPPAWVEGYSLGDEQLVAAGDDVRLMSAVRSDERVLLSVSWPGGRRYLMIDPHGD
Ga0308176_105167442	3300031996	Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSALRSDERVLLSVSWPGGRRYLMIDPHGDAAP
Ga0308176_114902701	3300031996	Soil	MDDLFIPLWPPAWVEDHTLSDEQLVAAGEDVKLMSAVRSDERVLLSVSWPGGRRYLMIDPHGG
Ga0307416_1032956201	3300032002	Rhizosphere	MDDLLIPLWPPAWVEDHDVSDEQLMDASEDVKLMSAMRSDQRVLLSVSWPGGRRYLMIDP
Ga0268251_103963952	3300032159	Agave	MDDLLIPLWPPAWVDDYELSDEQLVDASEDVKLMSALRSDQRVLLSVSWPGGRRYLMIDPEGDAPAEACLL
Ga0372946_0226545_1_201	3300034384	Soil	MDDIFIPLWPPAWVEDYTLSDEQLVAAGEDVRLMSAVRSDQRVLLSVSWPGGRRYLMIDPHGDGAAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080104

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences