Metagenome Family F080052

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F080052
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	50 residues
Representative Sequence	MEPINFLILFAVCITSAFAGGYVLGNLKATCESEQTRRWWMNRQIKRERR
Number of Associated Samples	82
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.74 %
% of genes near scaffold ends (potentially truncated)	26.96 %
% of genes from short scaffolds (< 2000 bps)	70.43 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (73.913 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (26.956 % of family members)
Environment Ontology (ENVO)	Unclassified (60.870 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (66.957 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.26% β-sheet: 0.00% Coil/Unstructured: 39.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13479	AAA_24	16.52
PF13539	Peptidase_M15_4	9.57
PF04448	DUF551	5.22
PF10926	DUF2800	2.61
PF05037	DUF669	2.61
PF04851	ResIII	1.74
PF12635	DUF3780	0.87
PF02557	VanY	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	0.87
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
All Organisms	root	All Organisms	26.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
cellular organisms	root	All Organisms → cellular organisms	20.00 %
Viruses	superkingdom	All Organisms → Viruses	6.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.00 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.22 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.22 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.87 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.87 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.87 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.87 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.91 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.22 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %
Verrucomicrobium spinosum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	0.87 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10013378	All Organisms → cellular organisms → Bacteria	3116	Open in IMG/M
3300000882\|FwDRAFT_10012458	Not Available	6044	Open in IMG/M
3300003413\|JGI25922J50271_10016885	Not Available	1889	Open in IMG/M
3300003413\|JGI25922J50271_10049360	Not Available	949	Open in IMG/M
3300005581\|Ga0049081_10018689	Not Available	2628	Open in IMG/M
3300005581\|Ga0049081_10026676	All Organisms → Viruses → Predicted Viral	2194	Open in IMG/M
3300005581\|Ga0049081_10109017	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005581\|Ga0049081_10215226	Not Available	685	Open in IMG/M
3300005582\|Ga0049080_10242433	Not Available	589	Open in IMG/M
3300005582\|Ga0049080_10289295	Not Available	530	Open in IMG/M
3300005585\|Ga0049084_10283670	Not Available	551	Open in IMG/M
3300005662\|Ga0078894_11416993	Not Available	580	Open in IMG/M
3300006484\|Ga0070744_10007066	Not Available	3366	Open in IMG/M
3300007559\|Ga0102828_1075783	Not Available	802	Open in IMG/M
3300007562\|Ga0102915_1261430	Not Available	559	Open in IMG/M
3300007597\|Ga0102919_1012535	Not Available	2537	Open in IMG/M
3300007600\|Ga0102920_1144419	Not Available	762	Open in IMG/M
3300007642\|Ga0102876_1129067	Not Available	680	Open in IMG/M
3300008108\|Ga0114341_10181826	Not Available	1192	Open in IMG/M
3300008110\|Ga0114343_1007853	Not Available	7491	Open in IMG/M
3300008261\|Ga0114336_1050300	All Organisms → cellular organisms → Bacteria	2164	Open in IMG/M
3300008448\|Ga0114876_1058349	Not Available	1702	Open in IMG/M
3300008450\|Ga0114880_1125645	Not Available	957	Open in IMG/M
3300008450\|Ga0114880_1202284	Not Available	664	Open in IMG/M
3300008999\|Ga0102816_1094434	Not Available	911	Open in IMG/M
3300009026\|Ga0102829_1005406	Not Available	3496	Open in IMG/M
3300009026\|Ga0102829_1025468	Not Available	1707	Open in IMG/M
3300009079\|Ga0102814_10157181	Not Available	1242	Open in IMG/M
3300009155\|Ga0114968_10265664	Not Available	970	Open in IMG/M
3300009158\|Ga0114977_10301178	Not Available	913	Open in IMG/M
3300009158\|Ga0114977_10387500	Not Available	781	Open in IMG/M
3300009161\|Ga0114966_10012189	Not Available	6795	Open in IMG/M
3300009163\|Ga0114970_10245915	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1035	Open in IMG/M
3300009164\|Ga0114975_10086117	Not Available	1826	Open in IMG/M
3300009181\|Ga0114969_10016437	Not Available	5285	Open in IMG/M
3300010160\|Ga0114967_10315952	Not Available	798	Open in IMG/M
3300011337\|Ga0153702_1569	Not Available	12311	Open in IMG/M
3300011339\|Ga0153700_11205	All Organisms → cellular organisms → Bacteria	11369	Open in IMG/M
3300012017\|Ga0153801_1007587	Not Available	2012	Open in IMG/M
3300012282\|Ga0157136_1002460	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1398	Open in IMG/M
3300012666\|Ga0157498_1002400	All Organisms → cellular organisms → Bacteria	3218	Open in IMG/M
3300013372\|Ga0177922_10578707	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1375	Open in IMG/M
3300013372\|Ga0177922_10682346	Not Available	526	Open in IMG/M
3300013372\|Ga0177922_11228040	Not Available	1078	Open in IMG/M
3300014811\|Ga0119960_1007342	Not Available	980	Open in IMG/M
3300017716\|Ga0181350_1126058	Not Available	611	Open in IMG/M
3300017716\|Ga0181350_1127459	Not Available	607	Open in IMG/M
3300017736\|Ga0181365_1078088	Not Available	812	Open in IMG/M
3300017761\|Ga0181356_1153705	Not Available	711	Open in IMG/M
3300017766\|Ga0181343_1008265	Not Available	3443	Open in IMG/M
3300017774\|Ga0181358_1081693	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300017774\|Ga0181358_1158215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	768	Open in IMG/M
3300017777\|Ga0181357_1120680	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300017777\|Ga0181357_1166898	Not Available	803	Open in IMG/M
3300017777\|Ga0181357_1312928	Not Available	530	Open in IMG/M
3300017780\|Ga0181346_1218260	Not Available	680	Open in IMG/M
3300017784\|Ga0181348_1100605	Not Available	1129	Open in IMG/M
3300017784\|Ga0181348_1127069	Not Available	974	Open in IMG/M
3300017784\|Ga0181348_1198602	Not Available	721	Open in IMG/M
3300017785\|Ga0181355_1198705	Not Available	789	Open in IMG/M
3300019784\|Ga0181359_1021884	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300019784\|Ga0181359_1029278	Not Available	2121	Open in IMG/M
3300019784\|Ga0181359_1130982	Not Available	884	Open in IMG/M
3300019784\|Ga0181359_1195570	Not Available	655	Open in IMG/M
3300020159\|Ga0211734_10661491	Not Available	1180	Open in IMG/M
3300020161\|Ga0211726_10618130	Not Available	1514	Open in IMG/M
3300020172\|Ga0211729_10415152	Not Available	549	Open in IMG/M
3300020205\|Ga0211731_11106619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1905	Open in IMG/M
3300022190\|Ga0181354_1103692	Not Available	925	Open in IMG/M
3300022407\|Ga0181351_1158751	Not Available	804	Open in IMG/M
3300022407\|Ga0181351_1236989	Not Available	579	Open in IMG/M
3300023184\|Ga0214919_10047827	Not Available	4132	Open in IMG/M
3300023184\|Ga0214919_10093172	All Organisms → cellular organisms → Bacteria	2602	Open in IMG/M
3300024346\|Ga0244775_10010503	All Organisms → cellular organisms → Bacteria	8818	Open in IMG/M
3300024346\|Ga0244775_10074358	Not Available	2910	Open in IMG/M
3300024346\|Ga0244775_10312256	Not Available	1302	Open in IMG/M
3300027225\|Ga0208025_1000246	All Organisms → cellular organisms → Bacteria	16691	Open in IMG/M
3300027237\|Ga0208930_1011315	Not Available	1298	Open in IMG/M
3300027256\|Ga0208932_1000515	All Organisms → cellular organisms → Bacteria	4312	Open in IMG/M
3300027278\|Ga0208439_1018807	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1429	Open in IMG/M
3300027320\|Ga0208923_1001808	Not Available	4026	Open in IMG/M
3300027659\|Ga0208975_1016288	All Organisms → cellular organisms → Bacteria	2487	Open in IMG/M
3300027659\|Ga0208975_1019707	Not Available	2224	Open in IMG/M
3300027679\|Ga0209769_1138039	Not Available	775	Open in IMG/M
3300027707\|Ga0209443_1211879	Not Available	676	Open in IMG/M
3300027733\|Ga0209297_1158148	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300027736\|Ga0209190_1143981	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1041	Open in IMG/M
3300027754\|Ga0209596_1003926	Not Available	11489	Open in IMG/M
3300027769\|Ga0209770_10002544	All Organisms → cellular organisms → Bacteria	9073	Open in IMG/M
3300027769\|Ga0209770_10057024	Not Available	1649	Open in IMG/M
3300027769\|Ga0209770_10095265	Not Available	1230	Open in IMG/M
3300027769\|Ga0209770_10147674	Not Available	949	Open in IMG/M
3300027770\|Ga0209086_10019637	All Organisms → cellular organisms → Bacteria → Proteobacteria	4270	Open in IMG/M
3300027797\|Ga0209107_10122574	Not Available	1362	Open in IMG/M
3300027963\|Ga0209400_1099227	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1360	Open in IMG/M
3300027969\|Ga0209191_1180220	Not Available	844	Open in IMG/M
3300028025\|Ga0247723_1001860	Not Available	11866	Open in IMG/M
3300031772\|Ga0315288_11381673	Not Available	591	Open in IMG/M
3300031772\|Ga0315288_11458511	Not Available	568	Open in IMG/M
3300031951\|Ga0315904_10191503	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300031999\|Ga0315274_10748692	Not Available	1046	Open in IMG/M
3300031999\|Ga0315274_11889670	Not Available	542	Open in IMG/M
3300032053\|Ga0315284_11758321	Not Available	642	Open in IMG/M
3300032118\|Ga0315277_11545190	Not Available	565	Open in IMG/M
3300032173\|Ga0315268_10958878	Not Available	860	Open in IMG/M
3300032173\|Ga0315268_11450036	Not Available	698	Open in IMG/M
3300032173\|Ga0315268_12673939	Not Available	512	Open in IMG/M
3300032177\|Ga0315276_10187058	All Organisms → cellular organisms → Bacteria → PVC group	2169	Open in IMG/M
3300032177\|Ga0315276_10670589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1113	Open in IMG/M
3300032256\|Ga0315271_10210674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	1561	Open in IMG/M
3300032342\|Ga0315286_12052069	Not Available	530	Open in IMG/M
3300032516\|Ga0315273_13153009	Not Available	511	Open in IMG/M
3300032516\|Ga0315273_13222397	Not Available	504	Open in IMG/M
3300034105\|Ga0335035_0290910	Not Available	968	Open in IMG/M
3300034356\|Ga0335048_0010222	All Organisms → cellular organisms → Bacteria	7004	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.13%
Terrestrial	Environmental → Terrestrial	0.87%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	83.48%
Marine	Environmental → Aquatic → Marine	15.65%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.87%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	42.61%
Lentic	Environmental → Aquatic → Freshwater → Lentic	36.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	12.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.48%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.61%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	34.78%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	29.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	13.04%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	12.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.48%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.61%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	26.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	13.04%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	12.17%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	12.17%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.83%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.48%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.48%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.61%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.61%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.74%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.74%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.87%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.87%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.87%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.87%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300003413	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005585	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ON33MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007562	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007642	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-3	Environmental	Open in IMG/M
3300008108	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NA	Environmental	Open in IMG/M
3300008110	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300008999	Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300011337	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Ilsan	Environmental	Open in IMG/M
3300011339	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Hannam	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012282	Freshwater microbial communities from Central Basin Methane Hotpot in Lake Erie, Ontario, Canada - Station 1365 - Bottom - Depth 20.5m	Environmental	Open in IMG/M
3300012666	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Surface Ice version 2	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017761	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.N	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020161	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027225	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3 (SPAdes)	Environmental	Open in IMG/M
3300027237	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-3 (SPAdes)	Environmental	Open in IMG/M
3300027256	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3 (SPAdes)	Environmental	Open in IMG/M
3300027278	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027707	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DCMD (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027797	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100133784	3300000756	Freshwater And Sediment	MEPINFLILFAVCITSAFVGGYVLGNLKATCEMEQTRRWWMNRQIRRERK*
FwDRAFT_100124583	3300000882	Freshwater And Marine	MEPLTFLALFATCTLCAFIAGYLIGNIKATCDSEQTRRWWMNRQIRRERR*
JGI25922J50271_100168853	3300003413	Freshwater Lake	MEPLTFLVLFGICTLCAFIAGYLIGNLKATCESEQTRRWWMNRQIKRERR*
JGI25922J50271_100493601	3300003413	Freshwater Lake	MEPLTFLALFGICTCCAFIAGYLIGNIKATCEMEQARRWWMNRQIKRERR*
Ga0049081_100186896	3300005581	Freshwater Lentic	MEPLTFLALFATCTICAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0049081_100266761	3300005581	Freshwater Lentic	MEPLTFLALFATCTICAFIAGYLIGNIKATCESEQTRRWWMNRQIRRE
Ga0049081_101090171	3300005581	Freshwater Lentic	MEPLTFLALFATCTTCAFIAGYLIGNIKATCESEQTRRWWMNR
Ga0049081_102152261	3300005581	Freshwater Lentic	MEPINFLILFAVCITSAFVGGYVLGNLKSHSEAEQTRRWWMNRQIKRERR*
Ga0049080_102424331	3300005582	Freshwater Lentic	MEPINFLILFAVCMSSAFAGGYVLGNMKAHSETEKSRRWWMNRQIRRERGE*
Ga0049080_102892952	3300005582	Freshwater Lentic	MEPLTFLALFATCTCCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0049084_102836702	3300005585	Freshwater Lentic	MEPLTFAILFAVCITSAFAGGYVLGNLKSHSEAEKIRRWWMNRQIKRERGEE*
Ga0078894_114169931	3300005662	Freshwater Lake	MEPLTFLALFATCTTCAFIAGYLIGNIKATCESEQARRWWMNRQIKRERR*
Ga0070744_100070663	3300006484	Estuarine	MEPLTFLALFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIKRERGE*
Ga0102828_10757832	3300007559	Estuarine	MEPLTFLALFATCTLCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0102915_12614302	3300007562	Estuarine	MEPINFLILFAVCITSAFAGGYVLGNLKATCESEQTRRWWMNRQIKRERR*
Ga0102919_10125356	3300007597	Estuarine	MEPLTFLALFGICTCCAFIAGYLIGNIKATCDLEQTRRWWMNRQIKRERR*
Ga0102920_11444191	3300007600	Estuarine	MEPLTFLALFGTCTCCAFIAGYLLGNIKATCESEQTRRWWMNRQIKRERR
Ga0102876_11290671	3300007642	Estuarine	MEPINFLILFAVCITSAFAGGYVLGNLKATCESEQTRRWWMNRQIKRER
Ga0114341_101818261	3300008108	Freshwater, Plankton	ISFQHNFMEPLTFLILFTVCITSAFVGGYVLGNLKATCESEQTRRWWMNRQIKRERR*
Ga0114343_10078534	3300008110	Freshwater, Plankton	MEPLTFLAIFATCMICSFIGGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0114336_10503001	3300008261	Freshwater, Plankton	MEPLTFLALFGICTCCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0114876_10583494	3300008448	Freshwater Lake	MEPLTFLALFGACTCCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0114880_11256451	3300008450	Freshwater Lake	LALFGICTCCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0114880_12022843	3300008450	Freshwater Lake	MEPLTFLALFGICTCCAFIAGYLIGNIKATCESEQTRRWWMNR
Ga0102816_10944341	3300008999	Estuarine	QILQHLKYMEPLTFLALFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIKRERGE*
Ga0102829_10054066	3300009026	Estuarine	MEPINFLILFAVCCTSAFAGGYVLGNLKAHSEAEKSRRWWMNRQIRRERGE*
Ga0102829_10254683	3300009026	Estuarine	MEPINFLILFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIRRERGE*
Ga0102814_101571812	3300009079	Estuarine	MEPINFLILFAVCCTSAFAGGYVLGNLKATCESEQTRRWWMNRQIKRERR*
Ga0114968_102656643	3300009155	Freshwater Lake	LALFATCTICAFIAGYLIGNIKATCQAEQTRRWWMNRQIRRERGEE*
Ga0114977_103011782	3300009158	Freshwater Lake	MEPINFLILFAVCITSAFAGGYVLGNIKATCEMEQTRKWWMNRQIRRERK*
Ga0114977_103875002	3300009158	Freshwater Lake	MEPLTFLALFATCTICAFIAGYLIGNMKATCQAEQTRRWWMNRQIRRERGE*
Ga0114966_1001218911	3300009161	Freshwater Lake	MEPINFLILFAVCITSAFVGGYVLGNIKATCEMEQTRKWWMSRQIRRERK*
Ga0114970_102459153	3300009163	Freshwater Lake	MEPINFLILFAVCITSAFVGGYVLGNLKATCQAEQTRRWWMNRQIRRERGEETK*
Ga0114975_100861174	3300009164	Freshwater Lake	MEPLTFLILFTVCCTSAFAGGYVLGNMKAHSETEKSRRWWRNRQIRRERGEETK*
Ga0114969_100164372	3300009181	Freshwater Lake	MEPINFLILFAVCITSAFAGGYILGNMKAHSETEKSRRWWMNRQIRRERGE*
Ga0114967_103159522	3300010160	Freshwater Lake	NFKYMEPINFLILFAVCITSAFVGVYVLGNIKATCEMEQTRKWWMSRQIRRERK*
Ga0153702_156922	3300011337	Freshwater	MEPLTFLAIFATCMICSFIGGYLIGSIKATCEAEQTRRWWMNRQTRRERR*
Ga0153700_1120513	3300011339	Freshwater	MEPLTFLALFATCTLCAFIAGYLLGNIKATCEAEQTRRWWMNRQIKRERR*
Ga0153801_10075871	3300012017	Freshwater	ILFTVCITSAFAGGYVLGNIKATCESEQTRRWWMNRQIRRERR*
Ga0157136_10024601	3300012282	Freshwater	LFGICTCCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0157498_10024004	3300012666	Freshwater, Surface Ice	MEPINFLILFTVCITSAFAGGYVLGNIKATCESEQTRRWWMNRQIRRERR*
Ga0177922_105787072	3300013372	Freshwater	MEPLTFLALFATCTTCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0177922_106823462	3300013372	Freshwater	MEPLTFLALFATCPTCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0177922_112280403	3300013372	Freshwater	MEPLTFLALFATCTTCAFIAGYLIGNIKATCELEQTRRWWMNRQ
Ga0119960_10073422	3300014811	Aquatic	MEPITFLALFVTCTTCAFIAGYLIGNIKATCESEQTRRWWMNRQIKRERR*
Ga0181350_11260582	3300017716	Freshwater Lake	MEPLTFLGLFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIRRERGEE
Ga0181350_11274592	3300017716	Freshwater Lake	MEPLTFLILFTVCCTSAFVGGYVLGNLKSHSEAEKIRRWWMNRQIRRERGEE
Ga0181365_10780881	3300017736	Freshwater Lake	MEPINFLILFAVCCTSAFAGGYVLGNLKSHSEAEKSRRWWMNRQIRRERGEETK
Ga0181356_11537054	3300017761	Freshwater Lake	INFLILFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIKRERGEETK
Ga0181343_10082659	3300017766	Freshwater Lake	MEPLTFLILFTTCMTCSFIGGYLLGNIKATCESEQTRRWWMNRQIKRERR
Ga0181358_10816932	3300017774	Freshwater Lake	MEPLTFLGLFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIRRERGE
Ga0181358_11582151	3300017774	Freshwater Lake	MEPLNFLILFAVCCTSAFAGGYVLGNMKAHSETEKSRRWWMNRQIRRERGE
Ga0181357_11206803	3300017777	Freshwater Lake	MEPINFLILFTVCCTSAFAGGYVLGNMKAHSETEKSRRWWMNRQIRRERGE
Ga0181357_11668981	3300017777	Freshwater Lake	MEPLTFAILFTVCITSAFVGGYVLGNLKATCQAEQTRRWWMNRQIKRERGEETK
Ga0181357_13129281	3300017777	Freshwater Lake	MEPLTFLILFTVCCTSSFVGGYVLGNMKAHSEAEKSRRWWMNRQIRRERGE
Ga0181346_12182602	3300017780	Freshwater Lake	MEPLNFLILFAVCITSAFAGGYVLGNLKAHSETEKSRRWWMNRQIKRERGE
Ga0181348_11006053	3300017784	Freshwater Lake	MEPLNFLILFAVCCTSAFVGGYVLGNLKATCQAEQTRRWWMNRQIRRERGE
Ga0181348_11270693	3300017784	Freshwater Lake	MEPLTFAILFTVCCTSAFVGGYVLGNLKSHSEAEKTRRWWMNRQIRRERGE
Ga0181348_11986021	3300017784	Freshwater Lake	LILFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIKRERGE
Ga0181355_11987053	3300017785	Freshwater Lake	MEPLTFLILFTVCCTSAFVGGYVLGNLKSHSEAEKTRRWWMNRQIRRERGE
Ga0181359_10218847	3300019784	Freshwater Lake	MEPLTFLILFTVCCTSSFVGGYVLGNLKATCQAEQTRRWWMNRQIRRERGE
Ga0181359_10292784	3300019784	Freshwater Lake	MEPINFLILFAVCITSAFAGGYVLGNLKAHSETEKSRRWWMNRQIRRERGE
Ga0181359_11309822	3300019784	Freshwater Lake	MEPINFLILFAVCITSAFVGGYVLGNLKATCQAEQTRRWWMNRQIRRERGE
Ga0181359_11955703	3300019784	Freshwater Lake	MEPINFLILFAVCITSAFAGGYVLGNMKAHSEIEKSRRWWMNRQTRRERGE
Ga0211734_106614912	3300020159	Freshwater	MEPLTFLALFGICTTCAFIAGYLIGNIKATCELEQTRKWWMNRQIKRERR
Ga0211726_106181302	3300020161	Freshwater	MEPINFLILFAVCITSAFAGGYVLGNMRAHSESEKSRRWWMNRQIRRERGEETK
Ga0211729_104151522	3300020172	Freshwater	MEPINFLILFAVCITSAFAGGYTLGNMKAHTEAEKSRRWWMNRQIKRERR
Ga0211731_111066191	3300020205	Freshwater	TTETKTKYMEPLTFLALFGICTCCAFIAGYLIGNIKATCELEQTRRWWMNRQTRRERR
Ga0181354_11036922	3300022190	Freshwater Lake	MEPINFLILFAVCITSAFAGGYVLGNMKAHSEAEKSRRWWMNRQIRRERGE
Ga0181351_11587511	3300022407	Freshwater Lake	RKILQHLKYMEPLTFAILFTVCCTSAFVGGYVLGNLKATCQAEQTRRWWMNRQIRRERGEETK
Ga0181351_12369892	3300022407	Freshwater Lake	MEPLNFLILFAVCMSSAFAGGYVLGNLKAHSETEKSRRWWMNRQIKRERGE
Ga0214919_100478276	3300023184	Freshwater	MEPINFLILFTVCCTSAFAGGYVLGNLKSHSEAEKSRRWWMNRQIKQERR
Ga0214919_100931721	3300023184	Freshwater	YMEPLTFLALFATCMICSFIGGYLIGNIKATCESEQTRRWWMNRQARRERR
Ga0244775_100105034	3300024346	Estuarine	MEPLTFLALFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIKRERGE
Ga0244775_100743585	3300024346	Estuarine	MEPLTFLALFATCTICAFIAGYLIGNLKATCQAEQTRRWWMNRQIRRERGEE
Ga0244775_103122561	3300024346	Estuarine	LEPINFLILFAVCCTSAFAGGYVLGNLKAHSEAEKSRRWWMNRQIRRERGE
Ga0208025_100024615	3300027225	Estuarine	MEPLTFLALFGICTCCAFIAGYLIGNIKATCDLEQTRRWWMNRQIKRERR
Ga0208930_10113154	3300027237	Estuarine	FGICTCCAFIAGYLIGNIKATCDLEQTRRWWMNRQIKRERR
Ga0208932_10005158	3300027256	Estuarine	LFGICTCCAFIAGYLIGNIKATCDLEQTRRWWMNRQIKRERR
Ga0208439_10188074	3300027278	Estuarine	MEPINFLILFAVCCTSAFAGGYVLGNLKATCESEQTRRWWMNR
Ga0208923_10018084	3300027320	Estuarine	MEPLTFLALFGICTCCAFIAGYLIGNIKATCEMEQARKWWMNRQIRRERR
Ga0208975_10162884	3300027659	Freshwater Lentic	MEPLTFLVLFATCTICAFIAGYLIGNMKATCEMEQARKWWMNRQIRRERK
Ga0208975_10197076	3300027659	Freshwater Lentic	MEPLTFLALFATCTCCAFIAGYLIGNIKATCEMEQTRRWWMNRQIKR
Ga0209769_11380391	3300027679	Freshwater Lake	MEPINFLILFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIRRERGEETK
Ga0209443_12118791	3300027707	Freshwater Lake	MEPINFLILFAVCCTSAFAGGYVLGNLKAHSETEKSRRWWMNRQIRRERGEETK
Ga0209297_11581482	3300027733	Freshwater Lake	MEPLTFLALFATCTICAFIAGYLIGNMKATCQAEQTRRWWMNRQIRRERGEE
Ga0209190_11439811	3300027736	Freshwater Lake	MEPINFLILFAVCITSAFVGGYVLGNLKATCQAEQTRRWWMNRQIRRERGEETK
Ga0209596_100392615	3300027754	Freshwater Lake	MEPINFLILFAVCITSAFAGGYILGNMKAHSETEKSRRWWMNRQIRRERGE
Ga0209770_1000254415	3300027769	Freshwater Lake	MEPLTFLALFATCTTCAFIAGYLIGNIKATCESEQARRWWMNRQIKRERR
Ga0209770_100570242	3300027769	Freshwater Lake	MEPLTFLVLFGICTLCAFIAGYLIGNLKATCESEQTRRWWMNRQIKRERR
Ga0209770_100952652	3300027769	Freshwater Lake	MEPLTFLVLFGICTLCAFIAGYLIGNIKATCEMEQARRWWMNRQIRRERR
Ga0209770_101476741	3300027769	Freshwater Lake	MEPLTFLALFGICTCCAFIAGYLIGNIKATCEMEQARRWWMNRQIKRERR
Ga0209086_100196376	3300027770	Freshwater Lake	MEPINFLILFAVCITSAFVGGYVLGNIKATCEMEQTRKWWMSRQIRRERK
Ga0209107_101225742	3300027797	Freshwater And Sediment	MEPLNFLILFAVCCTSAFAGGYVLGNLKATCEMEQARKWWMNRQIRRERK
Ga0209400_10992271	3300027963	Freshwater Lake	MEPINFLILFAVCITSAFAGGYVLGNMKAHSETEKSRRWWMNRQIRRERG
Ga0209191_11802203	3300027969	Freshwater Lake	MEPLTFLILFTVCCTSAFAGGYVLGNMKAHSETEKSRRWWRNRQIRRERGEE
Ga0247723_10018604	3300028025	Deep Subsurface Sediment	MEPLTFLAIFATCMICSFIGGYLIGNIKATCELEQTRKWWMNRQIKRERR
Ga0315288_113816732	3300031772	Sediment	MEPINFIILFTVCCTSAFVGGYVLGNMKATCQAEQTRRWWMNRQIRRERGEK
Ga0315288_114585112	3300031772	Sediment	MEPLTFLALFATCTTCAFIAGYLIGNMKATCQAEQTRRWWMNRQIRRERGE
Ga0315904_101915033	3300031951	Freshwater	MEPINFLILFAVCITSAFAGGYVLGNMKATCQAEQTRRWWMNRQIKRERR
Ga0315274_107486923	3300031999	Sediment	MEPLTFLALFTVCCTSAFVGGYVLGNMKATCQAEQTRRWWMNRQIRRERGE
Ga0315274_118896702	3300031999	Sediment	MEPLTFLILFTVCCTSAFVGGYVLGNMKATCQAEQTRRWWM
Ga0315284_117583213	3300032053	Sediment	PLTFLILFTVCCTSAFVGGYVLGNLKATCQAEQTRRWWMNRQIRRERGE
Ga0315277_115451902	3300032118	Sediment	MEPINFIILFTVCCTSAFVGGYVLGNMKATCQAEQTRRWWMNRQIRRERGEE
Ga0315268_109588782	3300032173	Sediment	MEPLTFLILFTVCCTSAFVGGYVLGNLKATCQAEQTRRWWMNRQLRRERGE
Ga0315268_114500363	3300032173	Sediment	YMEPLTFLILFTVCCTSAFVGGYVLGNLKATCQAEQTRRWWMNRQIRRERGEETK
Ga0315268_126739392	3300032173	Sediment	MEPLTFLALFATCTTCAFIAGYLIGNMKATCQAEQTRRWWMNRQIRRERGEETK
Ga0315276_101870582	3300032177	Sediment	MEPLTFLALFATCTLCAFIAGYLIGNMKATCQAEQTRRWWMNRQIRRERGEETK
Ga0315276_106705892	3300032177	Sediment	MEPLTFLALFAICTLCAFIAGYLIGNLKAHSETEKSRRWWMNRQIRRERGEK
Ga0315271_102106744	3300032256	Sediment	MEPLTFLALFATCTTCAFIAGYLIGNMKATCQAEQTRRWWMNRQIRRERGEK
Ga0315286_120520692	3300032342	Sediment	MEPLTFLALFATCTICAFIAGYLIGNMKATCQAEQTRRWWMNRQLRRERGEK
Ga0315273_131530092	3300032516	Sediment	MEPLTFLALFGICTCCAFIAGYLIGNLKAHSETEKSRRWWMNRQIRRERGE
Ga0315273_132223972	3300032516	Sediment	MEPLTFLALFTVCITSAFIAGYLIGNMKATCQAEQTRRWWMNRQIRRERGE
Ga0335035_0290910_2_142	3300034105	Freshwater	MEPLTFLALFATCTCCAFIAGYLIGNIKATCELEQTRKWWMNRQIRR
Ga0335048_0010222_5142_5294	3300034356	Freshwater	MEPLTFLALFATCTCCAFIAGYLIGNIKATCELEQTRKWWMNRQIRRERK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080052

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences