Metagenome Family F079969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079969
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	57 residues
Representative Sequence	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS
Number of Associated Samples	82
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.09 %
% of genes near scaffold ends (potentially truncated)	24.35 %
% of genes from short scaffolds (< 2000 bps)	67.83 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (24.348 % of family members)
Environment Ontology (ENVO)	Unclassified (37.391 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.609 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.86% β-sheet: 3.45% Coil/Unstructured: 70.69%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF08241	Methyltransf_11	29.57
PF02574	S-methyl_trans	6.96
PF07992	Pyr_redox_2	4.35
PF00149	Metallophos	4.35
PF00990	GGDEF	3.48
PF13451	zf-trcl	2.61
PF13476	AAA_23	2.61
PF13649	Methyltransf_25	1.74
PF02965	Met_synt_B12	1.74
PF02540	NAD_synthase	0.87
PF03795	YCII	0.87
PF00581	Rhodanese	0.87
PF02607	B12-binding_2	0.87
PF01257	2Fe-2S_thioredx	0.87
PF12674	Zn_ribbon_2	0.87
PF04002	RadC	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	6.96
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	6.96
COG1410	Methionine synthase I, cobalamin-binding domain	Amino acid transport and metabolism [E]	1.74
COG0171	NH3-dependent NAD+ synthetase	Coenzyme transport and metabolism [H]	0.87
COG1905	NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)	Energy production and conversion [C]	0.87
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.87
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.87 %
Unclassified	root	N/A	39.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.87 %
Unclassified	root	N/A	39.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	39.13 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.91 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	33.04 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	30.43 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Tylenchina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Panagrolaimomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Strongyloidoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Strongyloididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Parastrongyloides	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	30.43 %
Parastrongyloides trichosuri	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918006\|FACEMD_F1OL2UU01DP7PJ	Not Available	563	Open in IMG/M
2124908028\|beta3_all_NODE_96077_len_1169_cov_10_135159	Not Available	1219	Open in IMG/M
2124908038\|B3_all_c_ConsensusfromContig70542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3214	Open in IMG/M
3300001213\|JGIcombinedJ13530_102115938	Not Available	1374	Open in IMG/M
3300001870\|JGI24129J20441_1028962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1435	Open in IMG/M
3300002549\|JGI24130J36418_10005003	All Organisms → cellular organisms → Bacteria	4484	Open in IMG/M
3300002549\|JGI24130J36418_10035054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1417	Open in IMG/M
3300002549\|JGI24130J36418_10070092	Not Available	856	Open in IMG/M
3300003852\|Ga0031655_10130373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	990	Open in IMG/M
3300005938\|Ga0066795_10153804	Not Available	686	Open in IMG/M
3300005947\|Ga0066794_10000809	All Organisms → cellular organisms → Bacteria	6937	Open in IMG/M
3300006640\|Ga0075527_10080898	Not Available	889	Open in IMG/M
3300006642\|Ga0075521_10055572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1738	Open in IMG/M
3300006642\|Ga0075521_10244662	Not Available	857	Open in IMG/M
3300006642\|Ga0075521_10294238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	781	Open in IMG/M
3300006795\|Ga0075520_1062268	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300009029\|Ga0066793_10097544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1701	Open in IMG/M
3300009029\|Ga0066793_10782028	Not Available	542	Open in IMG/M
3300009549\|Ga0116137_1000392	All Organisms → cellular organisms → Bacteria	37178	Open in IMG/M
3300012931\|Ga0153915_10530846	Not Available	1348	Open in IMG/M
3300014490\|Ga0182010_10012057	All Organisms → cellular organisms → Bacteria	3900	Open in IMG/M
3300014490\|Ga0182010_10058528	Not Available	1852	Open in IMG/M
3300014494\|Ga0182017_10013959	Not Available	5640	Open in IMG/M
3300014494\|Ga0182017_10025940	All Organisms → cellular organisms → Bacteria	4014	Open in IMG/M
3300014494\|Ga0182017_10125392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1671	Open in IMG/M
3300014494\|Ga0182017_10160175	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300014494\|Ga0182017_10221378	Not Available	1203	Open in IMG/M
3300014494\|Ga0182017_10617025	Not Available	660	Open in IMG/M
3300014494\|Ga0182017_10625064	Not Available	655	Open in IMG/M
3300014496\|Ga0182011_10009972	All Organisms → cellular organisms → Bacteria	7165	Open in IMG/M
3300014496\|Ga0182011_10138498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1683	Open in IMG/M
3300014496\|Ga0182011_10304397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1057	Open in IMG/M
3300014496\|Ga0182011_10473480	Not Available	809	Open in IMG/M
3300014498\|Ga0182019_10001100	All Organisms → cellular organisms → Bacteria	13581	Open in IMG/M
3300014498\|Ga0182019_10185906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1337	Open in IMG/M
3300014502\|Ga0182021_10007687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	12781	Open in IMG/M
3300014502\|Ga0182021_10100952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3351	Open in IMG/M
3300014502\|Ga0182021_10116718	All Organisms → cellular organisms → Bacteria	3101	Open in IMG/M
3300014502\|Ga0182021_10192925	Not Available	2379	Open in IMG/M
3300014502\|Ga0182021_10250504	Not Available	2076	Open in IMG/M
3300014839\|Ga0182027_10004755	All Organisms → cellular organisms → Bacteria	20915	Open in IMG/M
3300014839\|Ga0182027_10008206	All Organisms → cellular organisms → Bacteria	15246	Open in IMG/M
3300014839\|Ga0182027_10035337	All Organisms → cellular organisms → Bacteria	6441	Open in IMG/M
3300014839\|Ga0182027_12128016	Not Available	534	Open in IMG/M
3300017929\|Ga0187849_1001376	All Organisms → cellular organisms → Bacteria	26581	Open in IMG/M
3300017938\|Ga0187854_10003961	All Organisms → cellular organisms → Bacteria	11452	Open in IMG/M
3300018005\|Ga0187878_1000047	All Organisms → cellular organisms → Bacteria	135643	Open in IMG/M
3300018024\|Ga0187881_10417136	Not Available	550	Open in IMG/M
3300019785\|Ga0182022_1029829	Not Available	3353	Open in IMG/M
3300019785\|Ga0182022_1193701	Not Available	1492	Open in IMG/M
3300019788\|Ga0182028_1043183	Not Available	991	Open in IMG/M
3300019788\|Ga0182028_1084285	Not Available	871	Open in IMG/M
3300023075\|Ga0224520_1079714	Not Available	735	Open in IMG/M
3300023311\|Ga0256681_12185008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2502	Open in IMG/M
3300024233\|Ga0224521_1053236	Not Available	900	Open in IMG/M
3300024240\|Ga0224522_1035703	Not Available	1250	Open in IMG/M
3300025481\|Ga0208079_1033497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1343	Open in IMG/M
3300025548\|Ga0208716_1116487	Not Available	520	Open in IMG/M
3300025650\|Ga0209385_1004506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5958	Open in IMG/M
3300025692\|Ga0209744_1080617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1151	Open in IMG/M
3300025725\|Ga0209638_1004315	All Organisms → cellular organisms → Bacteria	8290	Open in IMG/M
3300025852\|Ga0209124_10105517	Not Available	1162	Open in IMG/M
3300025857\|Ga0209014_10123722	Not Available	980	Open in IMG/M
3300025878\|Ga0209584_10235910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300026271\|Ga0209880_1113913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300027825\|Ga0209039_10190436	Not Available	838	Open in IMG/M
3300027896\|Ga0209777_10002392	All Organisms → cellular organisms → Bacteria	24791	Open in IMG/M
3300028069\|Ga0255358_1025948	Not Available	820	Open in IMG/M
3300028556\|Ga0265337_1020730	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300028573\|Ga0265334_10076435	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300028679\|Ga0302169_10012588	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300028732\|Ga0302264_1009698	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2216	Open in IMG/M
3300028855\|Ga0302257_1038634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1051	Open in IMG/M
3300028861\|Ga0302259_1090905	Not Available	739	Open in IMG/M
3300028865\|Ga0302291_10195534	Not Available	688	Open in IMG/M
3300028869\|Ga0302263_10046466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1714	Open in IMG/M
3300029984\|Ga0311332_10255703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1332	Open in IMG/M
3300029987\|Ga0311334_11723618	Not Available	533	Open in IMG/M
3300029990\|Ga0311336_11153219	Not Available	676	Open in IMG/M
3300030000\|Ga0311337_10014168	All Organisms → cellular organisms → Bacteria	6200	Open in IMG/M
3300030002\|Ga0311350_11465101	Not Available	606	Open in IMG/M
3300030114\|Ga0311333_10006161	All Organisms → cellular organisms → Bacteria	7711	Open in IMG/M
3300031240\|Ga0265320_10136018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1115	Open in IMG/M
3300031255\|Ga0315554_1034437	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300031277\|Ga0307425_1241077	Not Available	541	Open in IMG/M
3300031360\|Ga0307444_1012169	All Organisms → cellular organisms → Bacteria	3200	Open in IMG/M
3300031726\|Ga0302321_102230264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300031902\|Ga0302322_100146682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2522	Open in IMG/M
3300031918\|Ga0311367_10851658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	920	Open in IMG/M
3300032137\|Ga0316585_10043155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1439	Open in IMG/M
3300032177\|Ga0315276_11956133	Not Available	599	Open in IMG/M
3300032770\|Ga0335085_10315903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1845	Open in IMG/M
3300032783\|Ga0335079_10814772	Not Available	966	Open in IMG/M
3300032828\|Ga0335080_10273934	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300032893\|Ga0335069_10247571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2146	Open in IMG/M
3300032893\|Ga0335069_10355134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1731	Open in IMG/M
3300032897\|Ga0335071_11430757	Not Available	636	Open in IMG/M
3300033416\|Ga0316622_102243835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	632	Open in IMG/M
3300033433\|Ga0326726_10760138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	937	Open in IMG/M
3300033482\|Ga0316627_100704246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	939	Open in IMG/M
3300033487\|Ga0316630_11305225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300033489\|Ga0299912_10776759	Not Available	735	Open in IMG/M
3300033743\|Ga0334844_085376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300033743\|Ga0334844_086118	Not Available	615	Open in IMG/M
3300033798\|Ga0334821_099944	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300033890\|Ga0334810_001460	All Organisms → cellular organisms → Bacteria	7957	Open in IMG/M
3300033890\|Ga0334810_019410	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300033890\|Ga0334810_042659	Not Available	1119	Open in IMG/M
3300033890\|Ga0334810_057160	Not Available	950	Open in IMG/M
3300033890\|Ga0334810_073991	Not Available	824	Open in IMG/M
3300034125\|Ga0370484_0137210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	652	Open in IMG/M
3300034195\|Ga0370501_0002664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4409	Open in IMG/M
3300034195\|Ga0370501_0005522	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri	3274	Open in IMG/M
3300034195\|Ga0370501_0017602	All Organisms → cellular organisms → Bacteria	2052	Open in IMG/M
3300034281\|Ga0370481_0226052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.52%
Host-Associated	Host-Associated	3.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.48%
Aquatic	Environmental → Aquatic	13.04%
Plants	Host-Associated → Plants	3.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.13%
Peat	Environmental → Terrestrial → Peat	24.35%
Freshwater	Environmental → Aquatic → Freshwater	9.57%
Marine	Environmental → Aquatic → Marine	3.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.48%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	40.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	24.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.09%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.61%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.74%
Lake	Environmental → Aquatic → Freshwater → Lake	1.74%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	28.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	24.35%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	16.52%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.17%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.35%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.61%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.87%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.87%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.87%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	24.35%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	14.78%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	13.04%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	10.43%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	4.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.48%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.61%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.74%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.74%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.87%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.87%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.87%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.87%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.87%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.87%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918006	Soil microbial communities from sample at FACE Site 1 Maryland Estuary CO2+	Environmental	Open in IMG/M
2124908028	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908038	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300023311	Combined Assembly of Gp0281739, Gp0281740, Gp0281741	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028861	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031255	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70	Environmental	Open in IMG/M
3300031277	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-30	Environmental	Open in IMG/M
3300031360	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-40	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032137	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC	Host-Associated	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033743	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9	Environmental	Open in IMG/M
3300033798	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEMDE_3420040	2035918006	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAVSPS
beta3_all_01346970	2124908028	Soil	MARPVRTAVATTPLRPVKSHLIEDYNARTNVVRCDCGWSGIADEFAVHRRAVGAASPS
B3_all_c_01837400	2124908038	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS
JGIcombinedJ13530_1021159382	3300001213	Wetland	MARPVRTSVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGATSPS*
JGI24129J20441_10289622	3300001870	Arctic Peat Soil	MARPMRSVVASTPLRPAKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAASPS*
JGI24130J36418_100050034	3300002549	Arctic Peat Soil	MARPMRSVVVPTPLRPAKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGASSPS*
JGI24130J36418_100350541	3300002549	Arctic Peat Soil	MARPVRTAVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGFADDFAVHRRAVGAASPS*
JGI24130J36418_100700922	3300002549	Arctic Peat Soil	MARPMRSVVVPTPLRPAKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGASS
Ga0031655_101303732	3300003852	Freshwater Lake Sediment	MARPVRTTVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGAASPS*
Ga0066795_101538041	3300005938	Soil	MARPMRSVVVPTPLRPAKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGASSPS*
Ga0066794_100008094	3300005947	Soil	MARPVRTPVTPNPLRPAKSHLIEEYNARTNVVRCDCGWSGYADDFAVHRRAVGAASPS*
Ga0075527_100808982	3300006640	Arctic Peat Soil	MARPMRSVVAPTPLRPAKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAASPS*
Ga0075521_100555723	3300006642	Arctic Peat Soil	MARPVRTPVAPNPLRPAKSHLIEEYNARTNIVRCDCGWSGYADDFAVHRRAVGAASPS*
Ga0075521_102446621	3300006642	Arctic Peat Soil	MARPVRTAVATTPLRPVKSHLIEDYNARTNVVRCDCGWSGIADEFAVHRRAVGAASPS*
Ga0075521_102942382	3300006642	Arctic Peat Soil	MARPVRTPVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGYADDFAVHRRAVGAASPS*
Ga0075520_10622682	3300006795	Arctic Peat Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS*
Ga0066793_100975442	3300009029	Prmafrost Soil	MARPVRTAVAPNPLRPAKSHLIEEYNARTNIVRCDCGWSGFADDFAVHRRAVGAASPS*
Ga0066793_107820282	3300009029	Prmafrost Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVH
Ga0116137_100039218	3300009549	Peatland	MARPIRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS*
Ga0153915_105308461	3300012931	Freshwater Wetlands	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGHADDFAVHRRAVGAASPS*
Ga0182010_100120575	3300014490	Fen	MARPVRTSVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGAASPS*
Ga0182010_100585283	3300014490	Fen	MVRPVRTAVATTPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAIHRRAVGAASPS*
Ga0182017_100139593	3300014494	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWTGVADEFAVHRRAVGAASPS*
Ga0182017_100259402	3300014494	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAASPS*
Ga0182017_101253921	3300014494	Fen	NPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAASPS*
Ga0182017_101601752	3300014494	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGATSPS*
Ga0182017_102213782	3300014494	Fen	MVRPVRTAVAPTPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAIHRRAVGAASPS*
Ga0182017_106170251	3300014494	Fen	TAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS*
Ga0182017_106250641	3300014494	Fen	MARPVRTSVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFAVH
Ga0182011_100099722	3300014496	Fen	MARPVRTAVAPTPLRPVKSHLIEDYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS*
Ga0182011_101384982	3300014496	Fen	MARPVRTAVAPNPLRPAKSHLIEEYNARTNIVRCDCGWSGMADDFAVHRRAVGAASPS*
Ga0182011_103043971	3300014496	Fen	MARPVRTAVAPPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAIHRRAVGAASPS*
Ga0182011_104734802	3300014496	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAASP
Ga0182019_100011006	3300014498	Fen	MARPVRTPVTPNPLRPAKSHLIEEYNARTNVVRCDCGWSGFADDFAVHRRAVGAASPS*
Ga0182019_101859062	3300014498	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAIHRRAVGAASPS*
Ga0182021_1000768712	3300014502	Fen	MARPVRTAVAPPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGATSPS*
Ga0182021_101009522	3300014502	Fen	MARPVRTGVAPAPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAIHRRAVGATSPS*
Ga0182021_101167184	3300014502	Fen	PNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGAASPS*
Ga0182021_101929253	3300014502	Fen	MARPVRTAVAPTPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAIHRRAVGAASPS*
Ga0182021_102505042	3300014502	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS*
Ga0182027_1000475514	3300014839	Fen	MARPVRTSVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGATSPS*
Ga0182027_1000820611	3300014839	Fen	MEEELMARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS*
Ga0182027_100353374	3300014839	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGAASPS*
Ga0182027_121280161	3300014839	Fen	MARPVRTSVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS*
Ga0187849_100137612	3300017929	Peatland	MARPIRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS
Ga0187854_100039614	3300017938	Peatland	MARPVRTTVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGAASPS
Ga0187878_100004755	3300018005	Peatland	MARPVRTAVAPTPLRPVKSHLIEDYNARTNVVRCDCGWSGIADEFAIHRRAVGAASPS
Ga0187881_104171361	3300018024	Peatland	MARPVRTAVATTPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAIHRRAVGAASPS
Ga0182022_10298293	3300019785	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAIHRRAVGAASPS
Ga0182022_11937012	3300019785	Fen	MARPVRTAVAPTLLRPAKSHLIEQYNARTNVVRCDCGWSGHADDFAVHRRSVGAASPS
Ga0182028_10431832	3300019788	Fen	MEEELMARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS
Ga0182028_10842851	3300019788	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS
Ga0224520_10797141	3300023075	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRR
Ga0256681_121850084	3300023311	Freshwater	MARPIRAAGAPNPLRPVKSHLIEDYNARTNVVRCDCGWTGNADEFAVHRRAVGAASPS
Ga0224521_10532362	3300024233	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGAASPS
Ga0224522_10357032	3300024240	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFANDRR
Ga0208079_10334972	3300025481	Arctic Peat Soil	MARPVRTPVTPNPLRPAKSHLIEEYNARTNVVRCDCGWSGYADDFAVHRRAVGAASPS
Ga0208716_11164871	3300025548	Arctic Peat Soil	MARPVRTPVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS
Ga0209385_10045065	3300025650	Arctic Peat Soil	MARPVRTPVAPNPLRPAKSHLIEEYNARTNIVRCDCGWSGYADDFAVHRRAVGAASPS
Ga0209744_10806171	3300025692	Arctic Peat Soil	MARPVRAPVAPNPLRPAKSHLIEEYNARTNVVRCDCGWSGYADDFAVHRRAVGAASPS
Ga0209638_10043153	3300025725	Arctic Peat Soil	MARPMRSVVVPTPLRPAKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGASSPS
Ga0209124_101055172	3300025852	Arctic Peat Soil	MARPVRTPVTPNPLRPAKSHLIEEYNARTNVVRCDCGWSGYADDFAVHRRAV
Ga0209014_101237222	3300025857	Arctic Peat Soil	MARPMRSVVAPTPLRPAKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGASSPS
Ga0209584_102359101	3300025878	Arctic Peat Soil	DGGGTMARPVRTPVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGYADDFAVHRRAVGAASPS
Ga0209880_11139132	3300026271	Soil	TYGITPVFGNRGGRMARPMRSVVVPTPLRPAKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGASSPS
Ga0209039_101904361	3300027825	Bog Forest Soil	MARPIRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0209777_1000239216	3300027896	Freshwater Lake Sediment	MARPVRTSVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGAASPS
Ga0255358_10259482	3300028069	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWTGVADEFAVHRRAVGAASPS
Ga0265337_10207302	3300028556	Rhizosphere	MARPMRSVVVPTPLRPAKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGASSPS
Ga0265334_100764352	3300028573	Rhizosphere	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGATSPS
Ga0302169_100125883	3300028679	Fen	MARPVRTPVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGYADDFAVHRRAVGAASPS
Ga0302264_10096982	3300028732	Fen	MARPVRTAVATTPLRPVKSHLIEDYNARTNVVRCDCGWSGIADEFAVHRRAVVAASPS
Ga0302257_10386342	3300028855	Fen	MARPVRTPVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGYADDFAVHRRA
Ga0302259_10909052	3300028861	Fen	VRTSVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGATSPS
Ga0302291_101955341	3300028865	Fen	VRTAVATTPLRPVKSHLIEDYNARTNVVRCDCGWSGIADEFAVHRRAVGAASPS
Ga0302263_100464663	3300028869	Fen	MARPVRTAVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGLADDFAVHRRAVGAASPS
Ga0311332_102557031	3300029984	Fen	MARPVRTPVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGFADDFAVHRRAVGAASQS
Ga0311334_117236182	3300029987	Fen	MARPVRTAVATTPLRPVKSHLIEDYNARTNVVRCDCGWSGIADEFAVHRRAVGA
Ga0311336_111532192	3300029990	Fen	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAV
Ga0311337_100141683	3300030000	Fen	MSEMGDGGGTMARPVRTPVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGYADDFAVHRRAVGAASPS
Ga0311350_114651011	3300030002	Fen	MARPMRSVVVPTPLRPAKSHLIEEYNARTNIVRCDCGWSGNAEEFAVHR
Ga0311333_100061612	3300030114	Fen	MARPVRTSVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGATSPS
Ga0265320_101360182	3300031240	Rhizosphere	MARPVRTVSPTPLRPVKSHLIEDYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0315554_10344371	3300031255	Salt Marsh Sediment	MARPVRSTLSPAPPRPAKTHLIKDYNARSNVVHCDCGWSGSAEEFAVHRRAVGATSPS
Ga0307425_12410771	3300031277	Salt Marsh	MARPVRSTLSPAPLRPAKSHLIEDYNARTNVVRCDCGWSGNADEFAVHRRAVGASSPS
Ga0307444_10121695	3300031360	Salt Marsh	MARPVRSTLSPAPPRPAKTHLIKDYNARSNVVHCDCGWSGSAEEFAVHRRAVGATGPS
Ga0302321_1022302641	3300031726	Fen	MARPVRTGVAPAPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAIHRRAVGATSPS
Ga0302322_1001466822	3300031902	Fen	MARPVRTPVTPNPLRPAKSHLIEEYNARTNIVRCDCGWSGFADDFAVHRRAVGAASPS
Ga0311367_108516581	3300031918	Fen	MARPVRTPVTPNPLRPAKSHLIEEYNARTNVVRCDCGWSGFADDFAVHRRAVGAASPS
Ga0316585_100431552	3300032137	Rhizosphere	MARPVRSTLSPAPPRPAKTHLIKDYNARTNVVNCDCGWSGSAEEFAVHRRAVGASSPS
Ga0315276_119561331	3300032177	Sediment	MARPVRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGHADDFAVHRRAVGAASPS
Ga0335085_103159031	3300032770	Soil	APNPLRPVKSHLIEDYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0335079_108147721	3300032783	Soil	MARPVRTSVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGATSPS
Ga0335080_102739343	3300032828	Soil	MARPVRTAVAPNPLRPVKSHLIEDYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0335069_102475711	3300032893	Soil	VRTAVAPNPLRPVKSHLIEEYNARTNVVRCDCGWTGNADDFAVHRRAVGAASPS
Ga0335069_103551342	3300032893	Soil	MARPVRTAVAPNPLRPVKSHLIEDYNARTNIVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0335071_114307572	3300032897	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWTGNADEFAVHRRAVGAASPS
Ga0316622_1022438352	3300033416	Soil	MARPVRSTLSPAPLRPAKSHLIEDYNARTNIVRCDCGWSGNADDFAVHRRAVGASSPS
Ga0326726_107601382	3300033433	Peat Soil	MARPVRSTLSPAPLRPAKSHLIEDYNARTNVVRCDCGWSGNADDFAVHRRAVGASNPS
Ga0316627_1007042462	3300033482	Soil	MARPVRSTLSPAPLRPPKSHIIEDYNARTNIVRCDCGWSGNADEFAVHRRAVGASSPS
Ga0316630_113052251	3300033487	Soil	MARPVRTAVATTPVRPVKSHLIEDYNARTNVVRCDCGWTGNADDFAVHRRAVGASSPS
Ga0299912_107767591	3300033489	Soil	MARPVRTAVAPTPLRPVKSHLIEDYNARTNVVRCDCGWTGNADDFAIHRRAVGASSPS
Ga0334844_085376_192_368	3300033743	Soil	MARPVRTSVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGAASPS
Ga0334844_086118_2_148	3300033743	Soil	PNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0334821_099944_395_559	3300033798	Soil	MRSVVVPTPLRPAKSHLIEEYNARTNVVRCDCGWSGNADEFAVHRRAVGASSPS
Ga0334810_001460_538_714	3300033890	Soil	MARPVRTAVAPTPLRPVKSHLIEDYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0334810_019410_2_154	3300033890	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRA
Ga0334810_042659_209_385	3300033890	Soil	MARPVRTSVAPNPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0334810_057160_786_950	3300033890	Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAA
Ga0334810_073991_2_154	3300033890	Soil	VAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADDFAVHRRAVGAASPS
Ga0370484_0137210_292_468	3300034125	Untreated Peat Soil	MARPVRTAVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGAADDFAVHRRAVGAASPS
Ga0370501_0002664_1236_1412	3300034195	Untreated Peat Soil	MARPVRTPVNPNPLRPAKSHLIEEYNARTNIVRCDCGWSGFADDFAVHRRAVGAASPS
Ga0370501_0005522_594_770	3300034195	Untreated Peat Soil	MARPVRTSVAPNPLRPVKSHLIEEYNARTNIVRCDCGWSGNADEFAVHRRAVGATSPS
Ga0370501_0017602_291_467	3300034195	Untreated Peat Soil	MVRPVRTAVATTPLRPVKSHLIEEYNARTNVVRCDCGWSGNADDFAIHRRAVGAASPS
Ga0370481_0226052_482_667	3300034281	Untreated Peat Soil	GGNMARPVRTAVAPNPLRPAKSHLIEEYNARTNIVRCDCGWSGMADDFAVHRRAVGAASP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences