Metagenome / Metatranscriptome Family F079913

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079913
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	121 residues
Representative Sequence	MRRPTLVLALAVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Number of Associated Samples	105
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.61 %
% of genes near scaffold ends (potentially truncated)	47.83 %
% of genes from short scaffolds (< 2000 bps)	92.17 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.565 % of family members)
Environment Ontology (ENVO)	Unclassified (33.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.130 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.48% β-sheet: 36.77% Coil/Unstructured: 47.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.1.18.0: automated matches	d6nfra_	6nfr	0.6043
b.1.2.1: Fibronectin type III	d1iarb1	1iar	0.60091
b.1.4.1: beta-Galactosidase/glucuronidase domain	d4cu7a2	4cu7	0.59725
b.1.18.0: automated matches	d5icua_	5icu	0.5948
b.1.2.1: Fibronectin type III	d3d85d2	3d85	0.58458

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF06253	MTTB	31.30
PF12680	SnoaL_2	7.83
PF05988	DUF899	6.09
PF01266	DAO	2.61
PF09394	Inhibitor_I42	1.74
PF13305	TetR_C_33	1.74
PF07690	MFS_1	0.87
PF01144	CoA_trans	0.87
PF02518	HATPase_c	0.87
PF00440	TetR_N	0.87
PF12681	Glyoxalase_2	0.87
PF00005	ABC_tran	0.87
PF00903	Glyoxalase	0.87
PF11139	SfLAP	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	31.30
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	6.09
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.87
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.87
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.26 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.26 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.26 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.30 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.30 %
Unclassified	root	N/A	41.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.96 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	19.13 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5.22 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.35 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.87 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.13 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4.35 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	1.74 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.74 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.87 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.13 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples	4.35 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	1.74 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.74 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.87 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.13 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	4.35 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	1.74 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.87 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.87 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.13 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	4.35 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	1.74 %
Mycobacterium sp. UNC267MFSha1.1M11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UNC267MFSha1.1M11	0.87 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.87 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2273009	Not Available	1010	Open in IMG/M
3300001686\|C688J18823_10155549	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300003203\|JGI25406J46586_10147985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300004081\|Ga0063454_100127186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1291	Open in IMG/M
3300004114\|Ga0062593_101335313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300004153\|Ga0063455_100824507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UNC267MFSha1.1M11	646	Open in IMG/M
3300004463\|Ga0063356_106330988	Not Available	507	Open in IMG/M
3300005332\|Ga0066388_102088508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1019	Open in IMG/M
3300005334\|Ga0068869_100388697	Not Available	1145	Open in IMG/M
3300005547\|Ga0070693_101559680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005562\|Ga0058697_10303162	Not Available	762	Open in IMG/M
3300005564\|Ga0070664_101062971	Not Available	762	Open in IMG/M
3300005578\|Ga0068854_101880277	Not Available	550	Open in IMG/M
3300005614\|Ga0068856_100179078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	2132	Open in IMG/M
3300005614\|Ga0068856_100846670	Not Available	934	Open in IMG/M
3300005614\|Ga0068856_101916438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300005719\|Ga0068861_100791537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300005843\|Ga0068860_102853044	Not Available	501	Open in IMG/M
3300005844\|Ga0068862_101484504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300005983\|Ga0081540_1000993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25522	Open in IMG/M
3300005985\|Ga0081539_10017027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	5137	Open in IMG/M
3300006755\|Ga0079222_11095372	Not Available	699	Open in IMG/M
3300006806\|Ga0079220_10306804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	984	Open in IMG/M
3300006844\|Ga0075428_101652923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300006845\|Ga0075421_101299521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300006847\|Ga0075431_100156173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2347	Open in IMG/M
3300006904\|Ga0075424_101295139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300006954\|Ga0079219_12120348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300009147\|Ga0114129_12165136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300009545\|Ga0105237_12220937	Not Available	558	Open in IMG/M
3300009551\|Ga0105238_12165021	Not Available	591	Open in IMG/M
3300009553\|Ga0105249_12042158	Not Available	646	Open in IMG/M
3300010041\|Ga0126312_11357475	Not Available	527	Open in IMG/M
3300010042\|Ga0126314_10630567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	783	Open in IMG/M
3300010362\|Ga0126377_12913503	Not Available	552	Open in IMG/M
3300010371\|Ga0134125_10758752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1068	Open in IMG/M
3300010375\|Ga0105239_10500523	Not Available	1381	Open in IMG/M
3300010396\|Ga0134126_11338764	Not Available	792	Open in IMG/M
3300010401\|Ga0134121_12376586	Not Available	570	Open in IMG/M
3300012353\|Ga0137367_10659339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	730	Open in IMG/M
3300012355\|Ga0137369_10486442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	874	Open in IMG/M
3300012358\|Ga0137368_10636402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300012360\|Ga0137375_10124697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2567	Open in IMG/M
3300012960\|Ga0164301_11169702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300013102\|Ga0157371_10291649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1180	Open in IMG/M
3300013307\|Ga0157372_10563892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1327	Open in IMG/M
3300013308\|Ga0157375_12879169	Not Available	575	Open in IMG/M
3300014487\|Ga0182000_10687886	Not Available	504	Open in IMG/M
3300014497\|Ga0182008_10377728	Not Available	757	Open in IMG/M
3300014968\|Ga0157379_10544844	Not Available	1079	Open in IMG/M
3300015371\|Ga0132258_10848294	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300017792\|Ga0163161_11413995	Not Available	608	Open in IMG/M
3300017997\|Ga0184610_1275595	Not Available	556	Open in IMG/M
3300018027\|Ga0184605_10446687	Not Available	570	Open in IMG/M
3300018051\|Ga0184620_10089047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300018054\|Ga0184621_10005320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3517	Open in IMG/M
3300018066\|Ga0184617_1142428	Not Available	697	Open in IMG/M
3300018071\|Ga0184618_10258956	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300018081\|Ga0184625_10360504	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300019867\|Ga0193704_1086970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300019873\|Ga0193700_1043411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300019875\|Ga0193701_1025934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1202	Open in IMG/M
3300021078\|Ga0210381_10020867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1740	Open in IMG/M
3300022534\|Ga0224452_1118260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	814	Open in IMG/M
3300022694\|Ga0222623_10159549	Not Available	878	Open in IMG/M
3300022756\|Ga0222622_10228018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1251	Open in IMG/M
3300025898\|Ga0207692_10929193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300025933\|Ga0207706_10356407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	1271	Open in IMG/M
3300025942\|Ga0207689_11361059	Not Available	596	Open in IMG/M
3300025981\|Ga0207640_10703365	Not Available	867	Open in IMG/M
3300025981\|Ga0207640_11448831	Not Available	616	Open in IMG/M
3300026023\|Ga0207677_11379031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	649	Open in IMG/M
3300026075\|Ga0207708_11900394	Not Available	522	Open in IMG/M
3300026078\|Ga0207702_11692996	Not Available	625	Open in IMG/M
3300026118\|Ga0207675_100651680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1059	Open in IMG/M
3300027809\|Ga0209574_10038157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1178	Open in IMG/M
3300027909\|Ga0209382_10482330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1368	Open in IMG/M
3300028380\|Ga0268265_11495451	Not Available	679	Open in IMG/M
3300028704\|Ga0307321_1015575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1313	Open in IMG/M
3300028705\|Ga0307276_10067428	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300028713\|Ga0307303_10022050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1226	Open in IMG/M
3300028715\|Ga0307313_10023272	Not Available	1700	Open in IMG/M
3300028720\|Ga0307317_10058903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1240	Open in IMG/M
3300028720\|Ga0307317_10273272	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300028722\|Ga0307319_10031980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1631	Open in IMG/M
3300028744\|Ga0307318_10024082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1966	Open in IMG/M
3300028755\|Ga0307316_10271672	Not Available	618	Open in IMG/M
3300028768\|Ga0307280_10284226	Not Available	601	Open in IMG/M
3300028771\|Ga0307320_10058573	Not Available	1429	Open in IMG/M
3300028778\|Ga0307288_10446923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300028787\|Ga0307323_10286546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300028796\|Ga0307287_10243314	Not Available	681	Open in IMG/M
3300028811\|Ga0307292_10428966	Not Available	563	Open in IMG/M
3300028814\|Ga0307302_10227933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	911	Open in IMG/M
3300028824\|Ga0307310_10072903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1479	Open in IMG/M
3300028828\|Ga0307312_10776294	Not Available	635	Open in IMG/M
3300028828\|Ga0307312_11082471	Not Available	530	Open in IMG/M
3300028875\|Ga0307289_10036934	Not Available	1936	Open in IMG/M
3300028876\|Ga0307286_10209714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300028878\|Ga0307278_10007912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5027	Open in IMG/M
3300028878\|Ga0307278_10008962	All Organisms → cellular organisms → Bacteria	4715	Open in IMG/M
3300028878\|Ga0307278_10374980	Not Available	626	Open in IMG/M
3300028881\|Ga0307277_10083435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1340	Open in IMG/M
3300028881\|Ga0307277_10270347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	751	Open in IMG/M
3300028881\|Ga0307277_10393108	Not Available	619	Open in IMG/M
3300028884\|Ga0307308_10425999	Not Available	636	Open in IMG/M
3300028885\|Ga0307304_10181895	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300031938\|Ga0308175_101274261	Not Available	818	Open in IMG/M
3300031996\|Ga0308176_10509042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300031996\|Ga0308176_12168761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300032002\|Ga0307416_102788989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300032013\|Ga0310906_10197616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1217	Open in IMG/M
3300032126\|Ga0307415_100642772	Not Available	950	Open in IMG/M
3300032174\|Ga0307470_10970129	Not Available	674	Open in IMG/M
3300034680\|Ga0370541_035290	Not Available	615	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.48%
Host-Associated	Host-Associated	36.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.91%
Plants	Host-Associated → Plants	36.52%
Aquatic	Environmental → Aquatic	9.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.52%
Sediment	Environmental → Aquatic → Sediment	8.70%
Phylloplane	Host-Associated → Plants → Phylloplane	1.74%
Freshwater	Environmental → Aquatic → Freshwater	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.70%
Loam	Environmental → Terrestrial → Soil → Loam	6.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.74%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.48%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.48%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.09%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.48%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.74%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.74%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_22730092	3300000033	Soil	MRRPLLVVALAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIDGHKASVRHVGASTKFYVGRLPSSVKLHFGKRYRVVIXACSKLGCSRAVRDKTLPKPSL*
C688J18823_101555493	3300001686	Soil	TLVLAIAAVVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIDGHNAPVRHVGAKTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
JGI25406J46586_101479851	3300003203	Tabebuia Heterophylla Rhizosphere	MRGALVLGLVVAVVVAVPAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIAGHSTTVRHVGAKTKFYVAKVASSVRLHFGKKYRVVIRACDKTGCSRTVRDK
Ga0063454_1001271862	3300004081	Soil	MRRPTLVLAIAAVVLALTAAPALAVPRLAPRTLNLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIDGHNAPVRHVGAKTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0062593_1013353132	3300004114	Soil	MRRPMLVLAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDVSANFFLTVKVLGKNVSVTIAGHRATVRHVGGATKFYVGTLPSSVKLHFGKRYRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0063455_1008245071	3300004153	Soil	MRRPTLVLAIAAVVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIDGHNAPVRHVGAKTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0063356_1063309882	3300004463	Arabidopsis Thaliana Rhizosphere	AIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDVSANFFLTVKVLGKNVSVTIAGHRATVRHVGGATKFYVGTLPSSVKLHFGKRYRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0066388_1020885081	3300005332	Tropical Forest Soil	MKRALALGAVLALCVAVPALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPSSIELHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0068869_1003886971	3300005334	Miscanthus Rhizosphere	MLRLSLLLALVAGALAAAPALAAPQLAPGTINLSGTPTGSGNLERDVAASFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVAKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0070693_1015596801	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPTLVVAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIAGHKATVRHVGGATKFYVGRLASGVRLHFGKRYSVVIV
Ga0058697_103031622	3300005562	Agave	MKRALAIGVLLALCVALPALAAPQLAPGTINLSGTPTGSGTLMTDVAANFFLTKRVLGKQVHVTIDGHNAKVRHVGAKTKFYVGTLPSSIKLRYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0070664_1010629711	3300005564	Corn Rhizosphere	VAPGWKTARMLRLSLLLALVAGALAAAPALAAPQLAPGTINLSGTPTGSGNLDRDVAANFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVGKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0068854_1018802771	3300005578	Corn Rhizosphere	MLRLSLLLALVAGALAAAPALAAPQLAPGTINLSGTPTGSGNLDRGVAANFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVAKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0068856_1001790781	3300005614	Corn Rhizosphere	MLRLSLLLALVAGALAAAPALAAPQLAPGTINLSGTPTGSGNLDRDVAANFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVGKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0068856_1008466701	3300005614	Corn Rhizosphere	MRRPSVVLVLAAVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVSANFFLTVKVLGKNVSVTIAGRKATVRHVGGATKFYVGTLPSSIKLHFGRRYRVVITACSKLGCARAVRDKTLPKPSL*
Ga0068856_1019164381	3300005614	Corn Rhizosphere	MRRLPAVLALTVAFAACLVATALAAPRLAPGTINLSGTPTGNGNLEKDVAANFFLTKRVLGKQVHVTIAGHNAAVRHVGASTRFYVGKLPSAIRLPFGRRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0068861_1007915372	3300005719	Switchgrass Rhizosphere	MKRVLALAVALALCIAVPALAAPQLAPGTINLSGTPVGSGTFEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0068860_1028530441	3300005843	Switchgrass Rhizosphere	MLRLSLLLALVAAALAAAPALAAPQLAPGTINLSGTPTGSGNLDRDVAANFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVGKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPS
Ga0068862_1014845042	3300005844	Switchgrass Rhizosphere	MKRVLALAVALALCIAVPALAAPQLAPGTINLSGTPVGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0081540_100099325	3300005983	Tabebuia Heterophylla Rhizosphere	VPALAAPRLAPGTINLSGTPVGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTRFYVAKLPSSIRLRYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0081539_100170277	3300005985	Tabebuia Heterophylla Rhizosphere	MRGALVLGLVVAVVVAVPAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIAGHSTTVRHVGAKTKFYVAKVASSVRLHFGKKYRVVIRACDKTGCSRTVRDKTLPKPGL*
Ga0079222_110953721	3300006755	Agricultural Soil	TAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIAGHKATVRHVGGATKFYVGTLPSSIKLHFGKRYRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0079220_103068042	3300006806	Agricultural Soil	MRRPTLVVAFAAALLALFAASAIAAPQLAPGTINLSGTPTGSGTLENDIAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0075428_1016529232	3300006844	Populus Rhizosphere	MKRALGLAAVLALSIAVPALAAPQLAPGTINLSGTPVGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0075421_1012995211	3300006845	Populus Rhizosphere	MKRALGLAAVLALCIAVPALAAPQLAPGTINLSGTPVGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPS
Ga0075431_1001561732	3300006847	Populus Rhizosphere	MKRALGLAAVLALCIAVPALAAPQLAPGTINLSGTPVGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0075424_1012951392	3300006904	Populus Rhizosphere	MRRPTLVLAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIAGRKATVRHVGGATKFYVGTLPSSIKLHFGRRYRVVITACSKLGCSRAVRDKALPKPSL*
Ga0079219_121203482	3300006954	Agricultural Soil	MRRPTLVVAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIAGHKATVRHVGGATKFYVGRLASGVRLHFGKRYSVVIVACSKLGCSRAVR
Ga0114129_121651361	3300009147	Populus Rhizosphere	VVLGVALALAIAVPAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0105237_122209372	3300009545	Corn Rhizosphere	APGTINLSGTPTGSGNLERDVAASFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVAKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0105238_121650212	3300009551	Corn Rhizosphere	MRRCSRVLALTVVFVACFVASAAAAPQLAPGTINLSGTPTGDGNLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0105249_120421582	3300009553	Switchgrass Rhizosphere	LVLAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIAGHKATVRHVGGATKFYVGRLPSSVKLHFGKRYRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0126312_113574751	3300010041	Serpentine Soil	MRRLSFVLVLSVVLLACTATLAMAAPQLAPGTINLSGTPTGSGTLMKDVAANFFLTKRVLGKQVHVTIAGHNAKVRHVGAKTKFYVGTLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0126314_106305672	3300010042	Serpentine Soil	MRRLSFVLVLSVVLLACTATLAIAAPQLAPGTINLSGTPTGSGTLERDVAANFFLTKRVLGKQVHVTIDGRATTVRHVGASTKFYVAKLPSAIKLHFGRRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0126377_129135032	3300010362	Tropical Forest Soil	MRRLTLATAFAAVLLAVLAASAIAAPQLAPGTINLSGTPTGSGTLENDIAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGTLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0134125_107587522	3300010371	Terrestrial Soil	MLVLAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIAGHKATVRHVGGATKFYVGTLPSSIKLHFGKRYRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0105239_105005232	3300010375	Corn Rhizosphere	MLVLAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDVSANFFLTVKVLGKNVSVTIAGHRATVRHVGGATKFYVGTLPSSVKLHFGKRYRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0134126_113387641	3300010396	Terrestrial Soil	IAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIAGHKATVRHVGGATKFYVGTLPSSIKLHFGKRYRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0134121_123765862	3300010401	Terrestrial Soil	QLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIDGNNAPVRHVGASTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0137367_106593392	3300012353	Vadose Zone Soil	MRGLPFVLALTVVFAACIAVPAIAAPQLAPGTINLSGTPIGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRIVIRACDKTGCSRTVRDKTLPKPSL*
Ga0137369_104864422	3300012355	Vadose Zone Soil	MRRLPFVLALTVVFAACIAVPAIAAPQLAPGTINLSGTPIGSGTLEKDVAANFFLTRRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0137368_106364022	3300012358	Vadose Zone Soil	VTAIAAPQLAPGTINLSGTPIGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAKVRHVGASTKFYVGTLPSSIKLHYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0137375_101246971	3300012360	Vadose Zone Soil	MRRLPFVLALTVVFAACIAVPAIAAPQLAPGTINLSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAKVRHVGASTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0164301_111697021	3300012960	Soil	MLVLAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVRVLGKNVSVTIAGHKATVRHVGAGTRFYVGTLPSSIKLRFGKRHRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0157371_102916492	3300013102	Corn Rhizosphere	MLRLSLLLALVAGALAAAPALAAPQLAPGTINLSGTPTGSGNLERDVAANFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVAKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0157372_105638922	3300013307	Corn Rhizosphere	MLVLAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDVSANFFLTVKVLGKNVSVTIAGHRATVRHVGGATKFYVGTLPRSVKLHFGKRYRVVIVACSKLGCSRAVRDKTLPKPSL*
Ga0157375_128791691	3300013308	Miscanthus Rhizosphere	PQLAPGTINLSGTPTGNGNLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSVRLAFGKRYRVVIRACDRTGCSRTVRDKTLPKPSL*
Ga0182000_106878861	3300014487	Soil	MKRALAIGVLLALCVALPALAAPQLAPGTINLSGTPTGSGTLMTDVAANFFLTKRVLGKQVHVTIDGHNAKVRHVGAKTKFYVGTLPSSIKLHYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0182008_103777282	3300014497	Rhizosphere	MRRLAAVLAVTVVFGACFVATALAAPQLALGTINLSGTPTGNGNLDKDVAANFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVGKLPSSIRLAFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0157379_105448442	3300014968	Switchgrass Rhizosphere	GALAAAPALAAPQLAPGTINLSGTPTGSGNLERDVAASFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVAKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL*
Ga0132258_108482942	3300015371	Arabidopsis Rhizosphere	MLIVAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVSIAGHKATVRHVGGATRFYVGTLPSSVKLRFGKRYRVVITACSKLGCSRAVRDKTLPKPSL*
Ga0163161_114139951	3300017792	Switchgrass Rhizosphere	VPALAAPQLAPGTINLSGTPVGSGTFEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0184610_12755952	3300017997	Groundwater Sediment	AVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDIAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0184605_104466871	3300018027	Groundwater Sediment	MRRFPPVLALALVLVVCFVASAVAAPQLAPGTINLSGTPTGNGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGRLPSSVKLHFSKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0184620_100890471	3300018051	Groundwater Sediment	MRRPRLVLALTVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0184621_100053202	3300018054	Groundwater Sediment	MRRPTLVLALTVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0184617_11424282	3300018066	Groundwater Sediment	MKRVLALAVVLAAGIAVPAIAAPQLAPGTINLSGTPTGSGTLEKDIAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0184618_102589562	3300018071	Groundwater Sediment	MLRLIVLLALVITAVVAVPALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGASTKFYVGKLPSSVKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0184625_103605043	3300018081	Groundwater Sediment	QLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNAPVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0193704_10869701	3300019867	Soil	MRRPTLVLALAVVLAAALAATALAAPQLAPGTINLRGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKTSL
Ga0193700_10434111	3300019873	Soil	MRRPTLVLALTVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0193701_10259342	3300019875	Soil	MRRPTLVLALAVILAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0210381_100208672	3300021078	Groundwater Sediment	MRRPTLVLALAVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0224452_11182601	3300022534	Groundwater Sediment	MRRPTLVLALAVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQIHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTV
Ga0222623_101595492	3300022694	Groundwater Sediment	MRRTSLALALGVVLAACAAATAIAAPQLAPGTINLSGTPTGNGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0222622_102280182	3300022756	Groundwater Sediment	MRRTSLALALGVVLAACAAATAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHVGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0207692_109291931	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRRPMLVLAIAAAVLALTAAPALAVPRLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGRNVSVTIAGHKATVRHVGGATKFYVGTLPSSIKLHFGKRYRVVIT
Ga0207706_103564071	3300025933	Corn Rhizosphere	LCIAVPALAAPQLAPGTINLSGTPVGSGTFEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0207689_113610592	3300025942	Miscanthus Rhizosphere	GVAPGWKTARMLRLSLLLALVAGALAAAPALAAPQLAPGTINLSGTPTGSGNLERDVAASFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVAKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0207640_107033652	3300025981	Corn Rhizosphere	MLRLSLLLALVAGALAAAPALAAPQLAPGTINLSGTPTGSGNLDRGVAANFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVAKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0207640_114488311	3300025981	Corn Rhizosphere	ALAATALAAPQLAPGTINLSGTPTGSGTLEKDISANFFLTVKVLGKNVSVTIAGHKATVRQVGGATKFYVGRLPSSVKLHFGKRYRVVITACSKLGCSRAVRDKTLPKPSL
Ga0207677_113790312	3300026023	Miscanthus Rhizosphere	TVAFAACLVATALAAPRLAPGTINLSGTPTGNGNLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0207708_119003942	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	RVLALAVALALCIAVPALAAPQLAPGTINLSGTPVGSGTFEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0207702_116929962	3300026078	Corn Rhizosphere	MLRLSLLLALVAGALAAAPALAAPQLAPGTINLSGTPTGSGNLERDVAASFFLTKRVLGKQVHVTIDGHAAGVRHVGASTRFYVGKLPSSVKLPFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0207675_1006516802	3300026118	Switchgrass Rhizosphere	MKRVLALAVALALCIAVPALAAPQLAPGTINLSGTPVGSGTFEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0209574_100381572	3300027809	Agave	MRRALALGVVLALAIAVPAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIAGHNTTVRHVGAKTKFYVAKLPSSIKLHYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0209382_104823301	3300027909	Populus Rhizosphere	MKRALGLAAVLALCIAVPALAAPQLAPGTINLSGTPVGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPSSIRLHFGKRYRVVIRAC
Ga0268265_114954512	3300028380	Switchgrass Rhizosphere	MKRVLALAVALALCIAVPALAAPQLAPGTINLSGTPVGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNTTVRHVGAKTKFYVAKLPTSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307321_10155751	3300028704	Soil	MRRPTVVLALAVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307276_100674282	3300028705	Soil	MRRPAVVLVLAVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIAGHNAPVRHVGAKTKFYVAKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307303_100220502	3300028713	Soil	MRRPTLVLALTVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLSKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307313_100232721	3300028715	Soil	QLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307317_100589033	3300028720	Soil	VILAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307317_102732722	3300028720	Soil	MRRTSLALALGVVLAACAAATAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHFGKRYRVVIRACDKTG
Ga0307319_100319802	3300028722	Soil	MRRPTLVLALAVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307318_100240823	3300028744	Soil	MRRPTLVLALAVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307316_102716721	3300028755	Soil	ALTVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307280_102842262	3300028768	Soil	ALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGASAKFYVGKLPSSIKLHFGRRYRVVIVACDKTGCSRTVRDKTLPKPSL
Ga0307320_100585732	3300028771	Soil	MRRSSLVLALVIVAVMAAPALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGASTKFYVGKLPSSVRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307288_104469231	3300028778	Soil	MRRPTLVLALTVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRT
Ga0307323_102865461	3300028787	Soil	MRRTSLALALGVVLAACAAATAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307287_102433141	3300028796	Soil	ARRPSVDTGIDFGRGPRDGRSSWQTPLMRRLLPVIALALVLIAAVVAPALAAPQLAPGTINLSGTPTGSGTLEKDIAANFFLTKRVLGKQVHVTIDGHNATVRHVGASTKFYVGKLPSSVRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307292_104289661	3300028811	Soil	TALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307302_102279331	3300028814	Soil	GRRPGWETQPMRRSSMVLALVIVAVLAAPALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGASTKFYVGKLPSSVKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307310_100729031	3300028824	Soil	AVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307312_107762942	3300028828	Soil	MRRPTVVLALAVVLVAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307312_110824711	3300028828	Soil	AAGIAVPAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIRLHYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307289_100369343	3300028875	Soil	MRRSSLVLALVIVAVLAAPALAAPQLAPGTINLSGTLEKDVAANFFLTKRVLGKQVHVTIDGHDATVRHVGASTKFYVGKLPSSVKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307286_102097141	3300028876	Soil	MRRTSLALALGVVLAACAAATAIASPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHFGKRYRVVIRACDKTECSRTV
Ga0307278_100079122	3300028878	Soil	MRRTSLVLALGVVLAACAAATAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPTSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307278_100089626	3300028878	Soil	MRRSSLVLALVIVAVLAAPALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGASTKFYVGKLPSSVKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307278_103749802	3300028878	Soil	RLRAMRRTSLVLALGVVLAACVAATAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307277_100834352	3300028881	Soil	MKRVVALAAVFVACIAAPAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307277_102703471	3300028881	Soil	MRRPTLVLALTVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNATVRHVGAKTKFYVGKLQSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307277_103931081	3300028881	Soil	LAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIRLHYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307308_104259992	3300028884	Soil	LAVVLVAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307304_101818952	3300028885	Soil	LTVVLAAALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGNQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0308175_1012742612	3300031938	Soil	MKRTLALAAVFVACIAATAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0308176_105090422	3300031996	Soil	MKRTLALAAVFVACIAATAIAAPRLALGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIKLHYGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0308176_121687612	3300031996	Soil	MRRRTLVLVLAAVLAVALAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIDGHNAPVRHVGAKTRFYVGTLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307416_1027889891	3300032002	Rhizosphere	MKRALALAAVLALCVAVPALAAPQLAPGTINLSGTPTGSGTLMKDVAANFFLTKRVLGKQVHVTIAGHNAKVRHVGAKTKFYVGTLPSSIKLHFGKRYRVVIRAC
Ga0310906_101976161	3300032013	Soil	MRRPTVVLVLAVALAAAFAATALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGSQVHVTIDGHNAPVRHVGASTKFYVGKLPSSIRLHFGKRYRVVI
Ga0307415_1006427722	3300032126	Rhizosphere	SSLVLALVIVAVIAAPALAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0307470_109701292	3300032174	Hardwood Forest Soil	TLVLILAVAVLALTAAPAFAVPKLAPGTLNLSGTPTGSGTLEKDISANFFLTVKVLGKQVHVTIDGHNATVRHVGGGTKFYVGKLPSSIRLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL
Ga0370541_035290_2_355	3300034680	Soil	GVVLAACAAATAIAAPQLAPGTINLSGTPTGSGTLEKDVAANFFLTKRVLGKQVHVTIDGHNATVRHVGAKTKFYVGKLPSSIKLHFGKRYRVVIRACDKTGCSRTVRDKTLPKPSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079913

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences