Metagenome Family F079879

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079879
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	69 residues
Representative Sequence	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC
Number of Associated Samples	96
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.22 %
% of genes near scaffold ends (potentially truncated)	35.65 %
% of genes from short scaffolds (< 2000 bps)	73.04 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (28.696 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.78% β-sheet: 20.29% Coil/Unstructured: 44.93%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF05231	MASE1	31.30
PF03721	UDPG_MGDP_dh_N	4.35
PF01933	CofD	3.48
PF13229	Beta_helix	2.61
PF00196	GerE	1.74
PF13426	PAS_9	1.74
PF13401	AAA_22	1.74
PF13692	Glyco_trans_1_4	1.74
PF00512	HisKA	1.74
PF02518	HATPase_c	1.74
PF12847	Methyltransf_18	0.87
PF00072	Response_reg	0.87
PF02397	Bac_transf	0.87
PF00535	Glycos_transf_2	0.87
PF10082	BBP2_2	0.87
PF14279	HNH_5	0.87
PF13581	HATPase_c_2	0.87
PF08241	Methyltransf_11	0.87
PF03720	UDPG_MGDP_dh_C	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	31.30
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	31.30
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	31.30
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	4.35
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	4.35
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	4.35
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	4.35
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	4.35
COG0391	Archaeal 2-phospho-L-lactate transferase/Bacterial gluconeogenesis factor, CofD/UPF0052 family	Carbohydrate transport and metabolism [G]	3.48
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.17 %
Unclassified	root	N/A	7.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.17 %
Unclassified	root	N/A	7.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.17 %
Unclassified	root	N/A	7.83 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	45.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.83 %
Unclassified	root	N/A	7.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.35 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.87 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	45.22 %
Unclassified	root	N/A	7.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.74 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.87 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	45.22 %
Unclassified	root	N/A	7.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.74 %
Acidiferrobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales	0.87 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	45.22 %
Unclassified	root	N/A	7.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %
Acidiferrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae	0.87 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.87 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	45.22 %
Unclassified	root	N/A	7.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %
Sulfuricaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Sulfuricaulis	0.87 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.87 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	45.22 %
Unclassified	root	N/A	7.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.74 %
Sulfuricaulis limicola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Sulfuricaulis → Sulfuricaulis limicola	0.87 %
Nitrospira moscoviensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101565798	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105660599	Not Available	1001	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10061021	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300001661\|JGI12053J15887_10510328	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	574	Open in IMG/M
3300002562\|JGI25382J37095_10185863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300002908\|JGI25382J43887_10063309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2002	Open in IMG/M
3300002908\|JGI25382J43887_10143995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1217	Open in IMG/M
3300004114\|Ga0062593_102272137	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300004633\|Ga0066395_10043740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1946	Open in IMG/M
3300005167\|Ga0066672_10105366	All Organisms → cellular organisms → Bacteria	1725	Open in IMG/M
3300005178\|Ga0066688_10038314	All Organisms → cellular organisms → Bacteria	2704	Open in IMG/M
3300005179\|Ga0066684_10874059	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300005180\|Ga0066685_10002943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8128	Open in IMG/M
3300005330\|Ga0070690_100797562	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300005332\|Ga0066388_100072848	All Organisms → cellular organisms → Bacteria → Proteobacteria	3754	Open in IMG/M
3300005336\|Ga0070680_101918630	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300005440\|Ga0070705_100002237	All Organisms → cellular organisms → Bacteria → Proteobacteria	9808	Open in IMG/M
3300005468\|Ga0070707_100098080	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2838	Open in IMG/M
3300005471\|Ga0070698_100009648	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10327	Open in IMG/M
3300005526\|Ga0073909_10036035	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300005544\|Ga0070686_101079356	Not Available	662	Open in IMG/M
3300005545\|Ga0070695_101177298	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300005546\|Ga0070696_100828232	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	763	Open in IMG/M
3300005555\|Ga0066692_10351770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	935	Open in IMG/M
3300005557\|Ga0066704_11021401	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	510	Open in IMG/M
3300005560\|Ga0066670_10222166	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300005576\|Ga0066708_10952977	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300005713\|Ga0066905_100050820	All Organisms → cellular organisms → Bacteria	2536	Open in IMG/M
3300005713\|Ga0066905_100090348	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300005713\|Ga0066905_101344937	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300005764\|Ga0066903_103427679	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	855	Open in IMG/M
3300005983\|Ga0081540_1155697	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300006049\|Ga0075417_10007019	All Organisms → cellular organisms → Bacteria	3954	Open in IMG/M
3300006049\|Ga0075417_10063679	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300006058\|Ga0075432_10016802	All Organisms → cellular organisms → Bacteria → Acidobacteria	2498	Open in IMG/M
3300006794\|Ga0066658_10069531	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300006794\|Ga0066658_10924210	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	504	Open in IMG/M
3300006800\|Ga0066660_11647719	Not Available	510	Open in IMG/M
3300006844\|Ga0075428_100186292	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300006847\|Ga0075431_101481381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	637	Open in IMG/M
3300006852\|Ga0075433_10037192	All Organisms → cellular organisms → Bacteria	4197	Open in IMG/M
3300006852\|Ga0075433_10694766	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300006852\|Ga0075433_10979734	Not Available	737	Open in IMG/M
3300006854\|Ga0075425_100058226	All Organisms → cellular organisms → Bacteria	4331	Open in IMG/M
3300006854\|Ga0075425_100840879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1051	Open in IMG/M
3300009100\|Ga0075418_10645264	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300009444\|Ga0114945_10054741	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2179	Open in IMG/M
3300010043\|Ga0126380_10664053	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	832	Open in IMG/M
3300010335\|Ga0134063_10117235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1218	Open in IMG/M
3300010335\|Ga0134063_10737952	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300010336\|Ga0134071_10314732	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	787	Open in IMG/M
3300010358\|Ga0126370_11901886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	579	Open in IMG/M
3300010359\|Ga0126376_10276264	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300010362\|Ga0126377_10285573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1621	Open in IMG/M
3300010868\|Ga0124844_1206017	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300010868\|Ga0124844_1206880	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300012189\|Ga0137388_10023055	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira moscoviensis	4719	Open in IMG/M
3300012202\|Ga0137363_11714588	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	521	Open in IMG/M
3300012203\|Ga0137399_10017602	All Organisms → cellular organisms → Bacteria	4572	Open in IMG/M
3300012211\|Ga0137377_10034620	All Organisms → cellular organisms → Bacteria	4602	Open in IMG/M
3300012944\|Ga0137410_10055161	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2844	Open in IMG/M
3300012971\|Ga0126369_12575642	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	593	Open in IMG/M
3300014154\|Ga0134075_10536977	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	526	Open in IMG/M
3300014969\|Ga0157376_12297862	Not Available	578	Open in IMG/M
3300015371\|Ga0132258_11068717	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300016371\|Ga0182034_11578417	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300016445\|Ga0182038_12133446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300017659\|Ga0134083_10423821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	584	Open in IMG/M
3300018058\|Ga0187766_11394258	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300018064\|Ga0187773_10266001	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300018431\|Ga0066655_10077404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1801	Open in IMG/M
3300018433\|Ga0066667_11917954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300018468\|Ga0066662_10006128	All Organisms → cellular organisms → Bacteria	5955	Open in IMG/M
3300018468\|Ga0066662_10425119	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1178	Open in IMG/M
3300022563\|Ga0212128_10201785	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1268	Open in IMG/M
3300026309\|Ga0209055_1000858	All Organisms → cellular organisms → Bacteria	20549	Open in IMG/M
3300026324\|Ga0209470_1000092	All Organisms → cellular organisms → Bacteria	62878	Open in IMG/M
3300026325\|Ga0209152_10054085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1416	Open in IMG/M
3300026326\|Ga0209801_1125259	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1099	Open in IMG/M
3300026328\|Ga0209802_1236331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300026342\|Ga0209057_1124707	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	949	Open in IMG/M
3300026342\|Ga0209057_1141133	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	823	Open in IMG/M
3300026523\|Ga0209808_1222085	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	610	Open in IMG/M
3300026530\|Ga0209807_1291970	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300026536\|Ga0209058_1165121	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1008	Open in IMG/M
3300027527\|Ga0209684_1011950	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1379	Open in IMG/M
3300027646\|Ga0209466_1001072	All Organisms → cellular organisms → Bacteria	5487	Open in IMG/M
3300027654\|Ga0209799_1050318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	932	Open in IMG/M
3300027655\|Ga0209388_1147409	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	666	Open in IMG/M
3300027873\|Ga0209814_10006953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4374	Open in IMG/M
3300027873\|Ga0209814_10056175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1645	Open in IMG/M
3300027874\|Ga0209465_10191909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1019	Open in IMG/M
3300027907\|Ga0207428_10000693	All Organisms → cellular organisms → Bacteria	39143	Open in IMG/M
3300028381\|Ga0268264_11542114	Not Available	675	Open in IMG/M
3300028536\|Ga0137415_10023136	All Organisms → cellular organisms → Bacteria	6144	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1018751	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300031184\|Ga0307499_10037890	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1022918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → Sulfuricaulis → Sulfuricaulis limicola	1490	Open in IMG/M
3300031538\|Ga0310888_10012181	All Organisms → cellular organisms → Bacteria	3340	Open in IMG/M
3300031538\|Ga0310888_10599415	Not Available	668	Open in IMG/M
3300031549\|Ga0318571_10300645	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300031562\|Ga0310886_10679338	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300031720\|Ga0307469_10008532	All Organisms → cellular organisms → Bacteria	4849	Open in IMG/M
3300031720\|Ga0307469_10054993	All Organisms → cellular organisms → Bacteria	2530	Open in IMG/M
3300031720\|Ga0307469_10062660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2414	Open in IMG/M
3300031720\|Ga0307469_11652268	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300031820\|Ga0307473_10366164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	933	Open in IMG/M
3300031890\|Ga0306925_11259235	Not Available	737	Open in IMG/M
3300032012\|Ga0310902_11161810	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	542	Open in IMG/M
3300032017\|Ga0310899_10289435	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300032174\|Ga0307470_10558265	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300032174\|Ga0307470_10875883	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300032205\|Ga0307472_101081844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	757	Open in IMG/M
3300034818\|Ga0373950_0102939	Not Available	617	Open in IMG/M
3300034820\|Ga0373959_0084442	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.61%
Host-Associated	Host-Associated	17.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.87%
Plants	Host-Associated → Plants	17.39%
Aquatic	Environmental → Aquatic	1.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.13%
Loam	Environmental → Terrestrial → Soil → Loam	18.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.04%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.74%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Sand	Environmental → Terrestrial → Soil → Sand	1.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.35%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	1.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.74%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.74%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.87%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015657982	3300000364	Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPA*
INPhiseqgaiiFebDRAFT_1056605992	3300000364	Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFLREYGVCSECGESRLVTRAPC*
AF_2010_repII_A1DRAFT_100610211	3300000597	Forest Soil	MIARDKVTAFLLAHRGRAFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGG
JGI12053J15887_105103281	3300001661	Forest Soil	GRPATAALSVGRRAVILMIARDKVATFLLAHRGLYYCERCVAHAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPC*
JGI25382J37095_101858632	3300002562	Grasslands Soil	FLLAHKGRYYCEPCMARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC
JGI25382J43887_100633092	3300002908	Grasslands Soil	MIARDKVATFLLAHKGRYYCEPCMARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC*
JGI25382J43887_101439952	3300002908	Grasslands Soil	MIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSQC*
Ga0062593_1022721371	3300004114	Soil	AVPAVRGPPAMIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFQREYGVCSECGESRLVTRAPC*
Ga0066395_100437402	3300004633	Tropical Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC*
Ga0066672_101053662	3300005167	Soil	MIARDKVATFLLAHKGRYYCEPCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC*
Ga0066688_100383141	3300005178	Soil	RMIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSQC*
Ga0066684_108740592	3300005179	Soil	HRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC*
Ga0066685_100029436	3300005180	Soil	MAADKAMIARDKVAAFLLAHRGRAFCERCLGHAVGIDPSTGHRAATRIARAGGFVREYEVCSECGESRLVTRAPA*
Ga0070690_1007975622	3300005330	Switchgrass Rhizosphere	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC*
Ga0066388_1000728484	3300005332	Tropical Forest Soil	MIARDKVATFLLAHRGRCFCERCLGHAVGIDPSTGHRAATRISRAGGFVREYGVCSECGESRLVTRAPA*
Ga0070680_1019186302	3300005336	Corn Rhizosphere	MIARDKVSAFLVAHRGRCFCERCLGRAVGIDPSTGHRAATRIARAGGFIREYGVCSECGESRLVTRAVLLTSTGDVPGE*
Ga0070705_1000022377	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFLREYGVCSECGESRLVTRAPC*
Ga0070707_1000980803	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPC*
Ga0070698_1000096481	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIARDKVATFLLAHKGRYYCEPCMARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTR
Ga0073909_100360352	3300005526	Surface Soil	MIARDKVAAFLQAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPY*
Ga0070686_1010793561	3300005544	Switchgrass Rhizosphere	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFQREYGVCSECGESRLVTRAP
Ga0070695_1011772981	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFQREYGVCSECGESRLVTRAPC*
Ga0070696_1008282322	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGACSECGESRLVTRAPC*
Ga0066692_103517702	3300005555	Soil	PAAAAVSAVAGPSQGMIARDKVATFLLAHKGRYYCEPCMARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC*
Ga0066704_110214011	3300005557	Soil	AHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC*
Ga0066670_102221662	3300005560	Soil	MIARDKVATFLLAHKGRYYCEPCMARAVGIDPSTGHRTATRIARAGGFVREYGVCSQCGESRLVTRSPC*
Ga0066708_109529771	3300005576	Soil	MIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC*
Ga0066905_1000508203	3300005713	Tropical Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAP
Ga0066905_1000903482	3300005713	Tropical Forest Soil	MGADRPMIARDKVAAFLLAHRGRFFCERCLGHAVGIDPSTGHRAATRISRTGGFVREYGVCSECGESRLVTRAPA*
Ga0066905_1013449372	3300005713	Tropical Forest Soil	MGADRPMIARDKVATFLLAHRGRCFCERCLGHAVGIDPSTGHRAATRISRAGGFVREYGVCSECGESRLVTRAPA*
Ga0066903_1034276792	3300005764	Tropical Forest Soil	RPMIARDKVATFLLAHRGRCFCERCLGHAVGIDPSTGHRAATRISRAGGFIREYGVCSECGESRLVTRAPA*
Ga0081540_11556972	3300005983	Tabebuia Heterophylla Rhizosphere	MYMMIAREKVATFLLAHKGRYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYNVCSECGESRLVTRSPC*
Ga0075417_100070193	3300006049	Populus Rhizosphere	MMIAREKVATFLLAHKGRYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYNVCSECGESRLVTRSPG*
Ga0075417_100636792	3300006049	Populus Rhizosphere	MIARDKVSAFLVAHRGRCFCERCLGRAVGIDPSTGHRAATRIARAGGFIREYGVCAECGESRLVTRAVLLTSTGDVSGE*
Ga0075432_100168022	3300006058	Populus Rhizosphere	MIARDKVAAFLVAHRGRCFCERCLGHAVGIDPSTGHRAATRIARAGGFIREYGVCSECGESRLVTRAVLLTSTGDVPGE*
Ga0066658_100695312	3300006794	Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAVTRIARTGGFVREYGVCSECGESRLVTRAPC*
Ga0066658_109242102	3300006794	Soil	MLMIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPC*
Ga0066660_116477192	3300006800	Soil	MIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCS
Ga0075428_1001862922	3300006844	Populus Rhizosphere	MIARDKVAAFLLAHRGRCFCERCLGHAVGIDPSTGHRAATRIARTGGFIREYGVCSECGESRLVTRAAVLTSTGESPK*
Ga0075431_1014813812	3300006847	Populus Rhizosphere	MIARDKVAAFLLANRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC*
Ga0075433_100371924	3300006852	Populus Rhizosphere	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPY*
Ga0075433_106947661	3300006852	Populus Rhizosphere	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC*
Ga0075433_109797342	3300006852	Populus Rhizosphere	MIARDKVAAFLVAHRGRCFCERCLGHAVGIDPSTGHRAATRIARAGGFIREYGVCSECGESR
Ga0075425_1000582262	3300006854	Populus Rhizosphere	MIARDKVATFLLAHKGRYYCEPCMARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPC*
Ga0075425_1008408793	3300006854	Populus Rhizosphere	MIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRL
Ga0075418_106452644	3300009100	Populus Rhizosphere	MMIAREKVATFLLAHKGRYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYNVCSECGESRLVT
Ga0114945_100547412	3300009444	Thermal Springs	MIAKDRAAAFLSANAARAFCDRCLARALGIDPSTGHRAATKVRRSAEFVREYGVCSACRESRLVTRAIR*
Ga0126380_106640531	3300010043	Tropical Forest Soil	MIARDKVAAFLLAHRGRWFCERCLGHAVGIDPSTGHRAATRISRAGFFVREYGVCAECGESRLVTRAPE*
Ga0134063_101172352	3300010335	Grasslands Soil	MIARDKVAAFLLAHKGRYYCEPCMARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC*
Ga0134063_107379521	3300010335	Grasslands Soil	MIARDKVATFLLAHKGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESR
Ga0134071_103147322	3300010336	Grasslands Soil	MIARDKVATFLLAHKGRYYCEPCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPG*
Ga0126370_119018862	3300010358	Tropical Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGHAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC*
Ga0126376_102762642	3300010359	Tropical Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPG*
Ga0126377_102855731	3300010362	Tropical Forest Soil	MIARDKVAAFLLAHQGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRANC*
Ga0124844_12060172	3300010868	Tropical Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRA
Ga0124844_12068802	3300010868	Tropical Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTR
Ga0137388_100230559	3300012189	Vadose Zone Soil	MIARDKVATFLLAHRGRYFCERCVAHAVGIDPSTGHRAATRIARAGGFVREYGVCSKCGESRLVTRSPC*
Ga0137363_117145882	3300012202	Vadose Zone Soil	MIARDKVSAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC*
Ga0137399_100176022	3300012203	Vadose Zone Soil	MIARDKVATFLLAHRGLYYCERCVAHAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPC*
Ga0137377_100346202	3300012211	Vadose Zone Soil	MIARDKVATFLLAHKGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC*
Ga0137410_100551613	3300012944	Vadose Zone Soil	MIARDKVAAFLLAHRGRFFCEPCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC*
Ga0126369_125756421	3300012971	Tropical Forest Soil	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC*
Ga0134075_105369771	3300014154	Grasslands Soil	TRMIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSQC*
Ga0157376_122978621	3300014969	Miscanthus Rhizosphere	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFLREYGVCSECGE
Ga0132258_110687172	3300015371	Arabidopsis Rhizosphere	MIARDKVAAFLQAHRGRYFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC*
Ga0182034_115784172	3300016371	Soil	FLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC
Ga0182038_121334462	3300016445	Soil	IARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC
Ga0134083_104238212	3300017659	Grasslands Soil	MIARVKVATFLLAHKGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPS
Ga0187766_113942581	3300018058	Tropical Peatland	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAP
Ga0187773_102660011	3300018064	Tropical Peatland	MIARDKVAAFLLAHHGRFFCERCIGRAVGIDPSTGHRAATRIARTGGFVREYGVCSE
Ga0066655_100774042	3300018431	Grasslands Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC
Ga0066667_119179541	3300018433	Grasslands Soil	MIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPC
Ga0066662_100061282	3300018468	Grasslands Soil	MIARDKVATFLLAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSQC
Ga0066662_104251192	3300018468	Grasslands Soil	MIARDKVATFLLAHKGRYYCEPCMARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC
Ga0212128_102017852	3300022563	Thermal Springs	MIAKDRAAAFLSANAARAFCDRCLARALGIDPSTGHRAATKVRRSAEFVREYGVCSACRESRLVTRAIR
Ga0209055_10008585	3300026309	Soil	MIARDKVATFLLAHKGRYYCEPCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC
Ga0209470_100009227	3300026324	Soil	MAADKAMIARDKVAAFLLAHRGRAFCERCLGHAVGIDPSTGHRAATRIARAGGFVREYEVCSECGESRLVTRAPA
Ga0209152_100540852	3300026325	Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAVTRIARTGGFVREYGVCSECGESRLVTRAPC
Ga0209801_11252592	3300026326	Soil	SQGMIARDKVATFLLAHKGRYYCEPCMARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC
Ga0209802_12363312	3300026328	Soil	TRMIARDKVATFLLAHKGRYYCEPCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC
Ga0209057_11247072	3300026342	Soil	MIARDKVATFLLAHKGRYYCEPCVARAVGIDPSTGHRAATRIARSGGFVREYGVCSQCGESRLVTRSPC
Ga0209057_11411332	3300026342	Soil	MIARDKVATFLLAHKGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPG
Ga0209808_12220852	3300026523	Soil	RDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC
Ga0209807_12919702	3300026530	Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAP
Ga0209058_11651212	3300026536	Soil	LAHRGLYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSQCGESRLVTRSPC
Ga0209684_10119502	3300027527	Tropical Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPG
Ga0209466_10010723	3300027646	Tropical Forest Soil	MGADRPMIARDKVAAFLLAHRGRFFCERCLGHAVGIDPSTGHRAATRISRTGGFVREYGVCSECGESRLVTRAPA
Ga0209799_10503181	3300027654	Tropical Forest Soil	AMGADRPMIARDKVAAFLLAHRGRFFCERCLGHAVGIDPSTGHRAATRISRAGGFVREYGVCSECGESRLVTRAPA
Ga0209388_11474092	3300027655	Vadose Zone Soil	FLLAHQGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC
Ga0209814_100069533	3300027873	Populus Rhizosphere	MMIAREKVATFLLAHKGRYYCERCVARAVGIDPSTGHRAATRIARAGGFVREYNVCSECGESRLVTRSPG
Ga0209814_100561752	3300027873	Populus Rhizosphere	MIARDKVSAFLVAHRGRCFCERCLGRAVGIDPSTGHRAATRIARAGGFIREYGVCAECGESRLVTRAVLLTSTGDVSGE
Ga0209465_101919092	3300027874	Tropical Forest Soil	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRISRTGGFVREYGVCSECGESRLATRAPC
Ga0207428_1000069312	3300027907	Populus Rhizosphere	MIARDKVAAFLVAHRGRCFCERCLGHAVGIDPSTGHRAATRIARAGGFIREYGVCSECGESRLVTRAVLLTSTGDVPGE
Ga0268264_115421142	3300028381	Switchgrass Rhizosphere	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFLREYGVCSECGESRLVTRAPC
Ga0137415_100231362	3300028536	Vadose Zone Soil	MIARDKVATFLLAHRGLYYCERCVAHAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPC
(restricted) Ga0255311_10187513	3300031150	Sandy Soil	MIARDKVATFLLAHRGRYFCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPR
Ga0307499_100378901	3300031184	Soil	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGACSECGESRLVTCAPC
(restricted) Ga0255312_10229181	3300031248	Sandy Soil	MIARDKVATFLLAHRGRYFCERCVARAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRSPC
Ga0310888_100121812	3300031538	Soil	MIARDKVSAFLVAHRGRCFCERCLGRAVGIDPSTGHRAATRIARAGGFIREYGVCSECGESRLVTRAVLLTSTGDVPGE
Ga0310888_105994152	3300031538	Soil	MIARDKVAAFLQAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLV
Ga0318571_103006451	3300031549	Soil	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVTRAPC
Ga0310886_106793382	3300031562	Soil	MIARDKVAAFLQAHRGRFFCERCLGRAVGIDPSTGHRAASRIARAGGFVREYGVCSECGESRLVTRAPY
Ga0307469_100085322	3300031720	Hardwood Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC
Ga0307469_100549931	3300031720	Hardwood Forest Soil	MIARDKVAAFLQAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC
Ga0307469_100626602	3300031720	Hardwood Forest Soil	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGACSECGESRLVTRAPC
Ga0307469_116522682	3300031720	Hardwood Forest Soil	MIARDKVAAFLLAHRGRFFCEPCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC
Ga0307473_103661641	3300031820	Hardwood Forest Soil	DKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGACSECGESRLVTRAPC
Ga0306925_112592352	3300031890	Soil	MIARDKVAAFLLAHRGRWFCERCLGRAVGIDPSTGHRAATRIARTGGFVREYGVCSECGESRLVT
Ga0310902_111618101	3300032012	Soil	IARDKVAAFLQAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPY
Ga0310899_102894351	3300032017	Soil	MIARDKVAAFLQAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPY
Ga0307470_105582652	3300032174	Hardwood Forest Soil	MIARDKVSAFLVAHRGRCFCERCLGRAVGIDPSTGHRAATRIARAGGFIREYGVCSECGESRLVTRA
Ga0307470_108758832	3300032174	Hardwood Forest Soil	MIARDKVAAFLLAHRGRFFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSE
Ga0307472_1010818441	3300032205	Hardwood Forest Soil	MIARDKVAAFLLAHRGRYFCERCLGRAVGIDPSTGHRAATRIARAGGFVREYGVCSECGESRLVTRAPC
Ga0373950_0102939_399_617	3300034818	Rhizosphere Soil	MIARDKVSAFLVAHRGRCFCERCLGRAVGIDPSTGHRAATRIARAGGFIREYGVCSECGESRLVTRAVLLTST
Ga0373959_0084442_527_736	3300034820	Rhizosphere Soil	MIARDKVSAFLVAHRGRCFCERCLGRAVGIDPSTGHRAATRIARAGGFIREYGVCSECGESRLVTRAVLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters