NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F079833

Metagenome / Metatranscriptome Family F079833

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079833
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 58 residues
Representative Sequence AVELAERIRLDHMKGMHSGIIRELSEAERGRDSERVARLEAEARELARAITDMERRS
Number of Associated Samples 95
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.51 %
% of genes near scaffold ends (potentially truncated) 93.04 %
% of genes from short scaffolds (< 2000 bps) 91.30 %
Associated GOLD sequencing projects 91
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.130 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil
(26.087 % of family members)
Environment Ontology (ENVO) Unclassified
(45.217 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.826 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Mixed Signal Peptide: No Secondary Structure distribution: α-helix: 61.18%    β-sheet: 0.00%    Coil/Unstructured: 38.82%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domaind1fpoa21fpo0.94314
a.25.1.1: Ferritind2cf7a_2cf70.9335
a.25.1.0: automated matchesd5hjfa_5hjf0.93228
a.25.1.1: Ferritind4cvra_4cvr0.92221
a.25.1.1: Ferritind3t9ja_3t9j0.9141

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF03979Sigma70_r1_1 73.04
PF04542Sigma70_r2 14.78
PF04545Sigma70_r4 4.35
PF13545HTH_Crp_2 1.74
PF10410DnaB_bind 0.87
PF13155Toprim_2 0.87
PF08281Sigma70_r4_2 0.87
PF08450SGL 0.87
PF13189Cytidylate_kin2 0.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 87.83
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 14.78
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 14.78
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 14.78
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 0.87
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 0.87

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.13 %
UnclassifiedrootN/A0.87 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002911|JGI25390J43892_10042482All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300002914|JGI25617J43924_10072992All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300004153|Ga0063455_100680178All Organisms → cellular organisms → Bacteria → Terrabacteria group688Open in IMG/M
3300005172|Ga0066683_10875056All Organisms → cellular organisms → Bacteria → Terrabacteria group516Open in IMG/M
3300005172|Ga0066683_10882766All Organisms → cellular organisms → Bacteria → Terrabacteria group513Open in IMG/M
3300005176|Ga0066679_10018787All Organisms → cellular organisms → Bacteria3621Open in IMG/M
3300005176|Ga0066679_10240326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1164Open in IMG/M
3300005176|Ga0066679_10404234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium894Open in IMG/M
3300005439|Ga0070711_100955402All Organisms → cellular organisms → Bacteria → Terrabacteria group734Open in IMG/M
3300005446|Ga0066686_10708355All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300005467|Ga0070706_101942271All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005471|Ga0070698_100697069All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300005559|Ga0066700_10117433All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300005568|Ga0066703_10862512All Organisms → cellular organisms → Bacteria → Terrabacteria group516Open in IMG/M
3300005576|Ga0066708_10211437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis1220Open in IMG/M
3300005587|Ga0066654_10462749All Organisms → cellular organisms → Bacteria → Terrabacteria group694Open in IMG/M
3300005938|Ga0066795_10004568All Organisms → cellular organisms → Bacteria3545Open in IMG/M
3300005938|Ga0066795_10245203All Organisms → cellular organisms → Bacteria → Terrabacteria group530Open in IMG/M
3300005947|Ga0066794_10245279All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300005947|Ga0066794_10247014All Organisms → cellular organisms → Bacteria → Terrabacteria group535Open in IMG/M
3300006797|Ga0066659_11375985All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300006854|Ga0075425_102906143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium525Open in IMG/M
3300006903|Ga0075426_10085856All Organisms → cellular organisms → Bacteria2251Open in IMG/M
3300007076|Ga0075435_101397143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium613Open in IMG/M
3300009029|Ga0066793_10694237All Organisms → cellular organisms → Bacteria → Terrabacteria group578Open in IMG/M
3300009029|Ga0066793_10729899All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300009029|Ga0066793_10783116All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300009089|Ga0099828_11958717All Organisms → cellular organisms → Bacteria → Terrabacteria group513Open in IMG/M
3300009137|Ga0066709_104214500All Organisms → cellular organisms → Bacteria → Terrabacteria group524Open in IMG/M
3300009660|Ga0105854_1056730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1198Open in IMG/M
3300010048|Ga0126373_11413299All Organisms → cellular organisms → Bacteria → Terrabacteria group761Open in IMG/M
3300010081|Ga0127457_1042025All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300010090|Ga0127471_1007568All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300010099|Ga0127450_1075963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium951Open in IMG/M
3300010107|Ga0127494_1045825All Organisms → cellular organisms → Bacteria → Terrabacteria group521Open in IMG/M
3300010112|Ga0127458_1066614All Organisms → cellular organisms → Bacteria → Terrabacteria group518Open in IMG/M
3300010114|Ga0127460_1055376All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300010118|Ga0127465_1103912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium544Open in IMG/M
3300010121|Ga0127438_1072339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium645Open in IMG/M
3300010122|Ga0127488_1001862All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300010128|Ga0127486_1003057All Organisms → cellular organisms → Bacteria → Terrabacteria group536Open in IMG/M
3300010141|Ga0127499_1070296All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300010321|Ga0134067_10006087All Organisms → cellular organisms → Bacteria3261Open in IMG/M
3300010335|Ga0134063_10165458All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1031Open in IMG/M
3300010335|Ga0134063_10389780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium682Open in IMG/M
3300010401|Ga0134121_11218955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium753Open in IMG/M
3300010905|Ga0138112_1077240All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium748Open in IMG/M
3300010905|Ga0138112_1163446All Organisms → cellular organisms → Bacteria → Terrabacteria group548Open in IMG/M
3300011271|Ga0137393_10669174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium890Open in IMG/M
3300011271|Ga0137393_11361184All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300012198|Ga0137364_10457158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium958Open in IMG/M
3300012198|Ga0137364_11116516All Organisms → cellular organisms → Bacteria → Terrabacteria group593Open in IMG/M
3300012202|Ga0137363_10081702All Organisms → cellular organisms → Bacteria2409Open in IMG/M
3300012203|Ga0137399_10346003All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300012203|Ga0137399_11257309All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300012349|Ga0137387_10222997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1356Open in IMG/M
3300012351|Ga0137386_10611205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium784Open in IMG/M
3300012357|Ga0137384_11489197All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300012362|Ga0137361_11632982All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300012374|Ga0134039_1060116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1319Open in IMG/M
3300012377|Ga0134029_1188287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium825Open in IMG/M
3300012378|Ga0134025_1168672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium786Open in IMG/M
3300012379|Ga0134058_1103367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium544Open in IMG/M
3300012379|Ga0134058_1183583All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium556Open in IMG/M
3300012392|Ga0134043_1324000All Organisms → cellular organisms → Bacteria → Terrabacteria group548Open in IMG/M
3300012393|Ga0134052_1095843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium607Open in IMG/M
3300012401|Ga0134055_1061199All Organisms → cellular organisms → Bacteria → Terrabacteria group764Open in IMG/M
3300012401|Ga0134055_1237815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium510Open in IMG/M
3300012409|Ga0134045_1220508All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300012409|Ga0134045_1409190All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1118Open in IMG/M
3300012685|Ga0137397_10372616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1064Open in IMG/M
3300012922|Ga0137394_11099753All Organisms → cellular organisms → Bacteria → Terrabacteria group658Open in IMG/M
3300012930|Ga0137407_10643825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium996Open in IMG/M
3300014154|Ga0134075_10094650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1259Open in IMG/M
3300015078|Ga0167660_1012897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium918Open in IMG/M
3300017656|Ga0134112_10249427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium704Open in IMG/M
3300018433|Ga0066667_12241783All Organisms → cellular organisms → Bacteria → Terrabacteria group510Open in IMG/M
3300018468|Ga0066662_10008035All Organisms → cellular organisms → Bacteria5341Open in IMG/M
3300019872|Ga0193754_1031282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium567Open in IMG/M
3300019878|Ga0193715_1095692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium601Open in IMG/M
3300020004|Ga0193755_1015320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium2525Open in IMG/M
3300021080|Ga0210382_10053417All Organisms → cellular organisms → Bacteria1595Open in IMG/M
3300021088|Ga0210404_10290761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium897Open in IMG/M
3300021178|Ga0210408_11139149All Organisms → cellular organisms → Bacteria → Terrabacteria group598Open in IMG/M
3300021559|Ga0210409_10772844All Organisms → cellular organisms → Bacteria → Terrabacteria group833Open in IMG/M
3300022694|Ga0222623_10077352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium1291Open in IMG/M
3300022724|Ga0242665_10324958All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300025898|Ga0207692_10924439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium574Open in IMG/M
3300025910|Ga0207684_11688238All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300025917|Ga0207660_10807294All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300025929|Ga0207664_11487194All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300025929|Ga0207664_11532990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium588Open in IMG/M
3300026223|Ga0209840_1086159All Organisms → cellular organisms → Bacteria → Terrabacteria group683Open in IMG/M
3300026271|Ga0209880_1005791All Organisms → cellular organisms → Bacteria3444Open in IMG/M
3300026271|Ga0209880_1022163All Organisms → cellular organisms → Bacteria1545Open in IMG/M
3300026296|Ga0209235_1115309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1137Open in IMG/M
3300026315|Ga0209686_1170835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium618Open in IMG/M
3300026327|Ga0209266_1050932All Organisms → cellular organisms → Bacteria2039Open in IMG/M
3300026327|Ga0209266_1172874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium834Open in IMG/M
3300026343|Ga0209159_1103927All Organisms → cellular organisms → Bacteria1231Open in IMG/M
3300026524|Ga0209690_1098697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1199Open in IMG/M
3300027388|Ga0208995_1020535All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1143Open in IMG/M
3300027480|Ga0208993_1018379All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300027667|Ga0209009_1027596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1393Open in IMG/M
3300027725|Ga0209178_1278134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium611Open in IMG/M
3300027842|Ga0209580_10147001All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300027986|Ga0209168_10531765All Organisms → cellular organisms → Bacteria → Terrabacteria group566Open in IMG/M
3300028536|Ga0137415_10429366All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1126Open in IMG/M
3300028824|Ga0307310_10626842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium549Open in IMG/M
3300031740|Ga0307468_100343026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1109Open in IMG/M
3300031740|Ga0307468_102058289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium548Open in IMG/M
3300032180|Ga0307471_101407300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium857Open in IMG/M
3300032180|Ga0307471_103101601All Organisms → cellular organisms → Bacteria → Terrabacteria group589Open in IMG/M
3300032261|Ga0306920_104274384All Organisms → cellular organisms → Bacteria → Terrabacteria group514Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil26.09%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.04%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil6.09%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.22%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.48%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.48%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil2.61%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.61%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.61%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.74%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.74%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.74%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.87%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.87%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.87%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.87%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.87%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.87%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.87%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.87%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300005947Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009029Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010081Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010090Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010097Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010099Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010107Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010112Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010114Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010118Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010121Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010122Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010128Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010905Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012374Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012377Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012378Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012379Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012393Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012401Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015078Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019872Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026223Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)EnvironmentalOpen in IMG/M
3300026271Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027388Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027480Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027667Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25390J43892_1004248213300002911Grasslands SoilAVELAERIRLEHMKGMHSGIIRQLSEAERGRDSERVAQLEAEARELARAITDMERRG*
JGI25617J43924_1007299213300002914Grasslands SoilNVDEDVAVELAERIRLDHMRSRHSGIIRELSEAERGSDSERVARLETEARELARAIAEMERRG*
Ga0063455_10068017823300004153SoilPPPNVDDEVAIELTERIRLDHMKGMHNGIIRELSEAERGRDSERVARLETEARELARAITDMERRS*
Ga0066683_1087505613300005172SoilRIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRN*
Ga0066683_1088276613300005172SoilRIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRS*
Ga0066679_1001878713300005176SoilVELAERIRLDHMRGRHSGIIRELSEAERGRDSERVARLEAEARELARAISDMERRV*
Ga0066679_1024032623300005176SoilVDDEVAVELAERIRLEHMKGMHSGIIRQLSEAERGKDSERVAQLEAEAREIYRAISDMERRS*
Ga0066679_1040423423300005176SoilVDDEVAVELAERIRLEHMKGMHSGIIRQLSEAERGKDSEKVAQLEAEAREIYRAIADMERRG*
Ga0070711_10095540213300005439Corn, Switchgrass And Miscanthus RhizosphereVDDEVAVELAERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRS*
Ga0066686_1070835513300005446SoilARLRLDRMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0070706_10194227123300005467Corn, Switchgrass And Miscanthus RhizosphereVDDEVAVELAERIRLEHMKGMHSGIIRELSEAERGRDSERVARLEAEARELARAITDMERRD*
Ga0070698_10069706913300005471Corn, Switchgrass And Miscanthus RhizosphereAEELVARIRLDRMKVRHSGIIRELSEAERGREAERVARLEAEASELARAINDMERSR*
Ga0066700_1011743313300005559SoilLAERIRLDHMKGRHSGIIRELSEAERGRDSDMVARLEAEARELGRAIQEMERRG*
Ga0066703_1086251223300005568SoilELAERIRLEHMKGMQNGIIRELSEAERGQDSERVAQLEAQARELGRAITDMERRS*
Ga0066708_1021143713300005576SoilPPPNVDDEVAIELAERIRLEHMKGMQNGIIRELSEAERGQDSERVAQLEAQARELGRAITDMERRS*
Ga0066654_1046274913300005587SoilRLEHMKGMQNGIIRELSEAERGQDSERVAQLEAQARELGRAITDMVRRS*
Ga0066795_1000456813300005938SoilAAPPPSVDDEVAVELAERIRLDHMKGLHSGIIRELSEAESGKDSERVARLEAKARELARAINDLERRS*
Ga0066795_1024520323300005938SoilEVAVELAERIRLDHMKGLHSGIIRELSEAESGKDSERVARLEAEARELARAINELERRS*
Ga0066794_1024527913300005947SoilERIRLDHMKGLHSGIIRELSEAESGKDSERVARLEAEARELARAINELERRS*
Ga0066794_1024701423300005947SoilAERIRLDHMKGLHSGIIRELSEAESGKDSERVARLEAEARELARAITDMERRG*
Ga0066659_1137598523300006797SoilAAPPPNVDDEVAVELAERIRLDHMKGMHSGIIRELSEAERGRDSERVARLEAEARELARAITDMERRS*
Ga0075425_10290614323300006854Populus RhizospherePNVDDDLAVELTERIRLDHMKGMHNGIIRELSEAERGRDSERVTRLETQARELARAITDMERRS*
Ga0075426_1008585633300006903Populus RhizosphereLAARIRLEHMKGMHSGIIRELSEAERGKDSEKVARLEAEARELARAITDMERRG*
Ga0075435_10139714313300007076Populus RhizosphereIRLEHMKGMHSGIIRELSEAERGQDSERVARLETEARELARAITDMERRG*
Ga0066793_1069423723300009029Prmafrost SoilPSVDDEVAVELAERVRLDHMKGLHSGIIRELSEAESGKDSERVGRLEAKARELARAINDLERRG*
Ga0066793_1072989913300009029Prmafrost SoilRIRLDHMKGLHSGIIRELSEAESGKDSERVARLEAKARELARAINDLERRS*
Ga0066793_1078311613300009029Prmafrost SoilRIRLDHMKGLHSGIIRELSEAESGKDSERVARLEAKARELARAINELERRS*
Ga0099828_1195871713300009089Vadose Zone SoilRLEHMKGMRSGIIRELSEAERGKDSERVARLEAEARELARAISDMERRG*
Ga0066709_10421450013300009137Grasslands SoilERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRS*
Ga0105854_105673013300009660Permafrost SoilVDDDLAVELAERIRLDRMKSRESAIIRELSEAERGRDVQGVARLEAEARELAHAIGDLERRMSSSRE*
Ga0126373_1141329913300010048Tropical Forest SoilHMKGMHSGIIRELSDAERGRDSERVVRLEAEAGELARAIKDMERRGLTSRG*
Ga0127457_104202523300010081Grasslands SoilLRLDRMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0127471_100756823300010090Grasslands SoilAAPPPNVDGQVAEELAARLRLDRMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0127501_102657123300010097Grasslands SoilDRMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0127450_107596313300010099Grasslands SoilRLDHMKGRHSGIIRELSEAERGRDLDMVARLEAEARELGRAIQEMERRG*
Ga0127494_104582513300010107Grasslands SoilPPPNVDDEVAVELAERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRS*
Ga0127458_106661423300010112Grasslands SoilLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRS*
Ga0127460_105537623300010114Grasslands SoilVAEELVARLRLDLMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0127465_110391213300010118Grasslands SoilPNVDDELAVELTERIRLDHMKGMHSGIIRELSEAERGRDSERVARLETEARELARAITDMERRG*
Ga0127438_107233923300010121Grasslands SoilAVELAERIRLDHMKGMHSGIIRELSEAERGRDSERVARLEAEARELARAITDMERRS*
Ga0127488_100186223300010122Grasslands SoilAHLRLDRMEGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0127486_100305723300010128Grasslands SoilDEVAVELAERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRN
Ga0127499_107029623300010141Grasslands SoilPSVDDEVAVELAERIRLDHMKSRHSAIIRELSEAERGWDLEGVARLESEARELAHAINDLERRV*
Ga0134067_1000608763300010321Grasslands SoilVDDEVAVELTERIRLDHMKGMHNGIIRELSEAERGRDSERVARLEAEARELARAITDMERRS*
Ga0134063_1016545823300010335Grasslands SoilAIELAERIRLEHMKGMHSGIIRELSEAERGRDSERVARLEAEARELSRAITDMERRS*
Ga0134063_1038978013300010335Grasslands SoilLAERIRLEHMKGMHSGIIRELSEAERGRDSERVVRLEAEARELARAIKDMERRG*
Ga0134121_1121895513300010401Terrestrial SoilAAPPPSVDDELAVELTERIRLDHMKGMHSGIIRELSEAERNRDSERGTRLETQARELARAITEMERRS*
Ga0138112_107724013300010905Grasslands SoilRLRLDRMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0138112_116344613300010905Grasslands SoilLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRN*
Ga0137393_1066917423300011271Vadose Zone SoilRITLDHMRGRHSGIIRELSEAERGKDSERVARLEAEAREIGHAIDEMERRG*
Ga0137393_1136118413300011271Vadose Zone SoilLDHMKGLHSGIIRELSEAESGKDSEGVARLEAKARELARAINELERRG*
Ga0137364_1045715823300012198Vadose Zone SoilVAVELAERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRS*
Ga0137364_1111651623300012198Vadose Zone SoilVAVELAERIRLEHMKGMQNGIIRELSEAERGRDLDMVARLEAEARELGRAIQEMERRG*
Ga0137363_1008170213300012202Vadose Zone SoilEVAVELAERIRLDHMKGRHSGIIRELSEAERGKDSERVARLEAEARELARAIADMERRG*
Ga0137399_1034600323300012203Vadose Zone SoilLAERIRLDHMRGRHSGIIRELSEAERGRDSERVARLEAEARELARAISDMERRV*
Ga0137399_1125730923300012203Vadose Zone SoilAVRVHLDHMKGLHSGIIRELSEAERGNDSERVGRLEAKARELARAINEMERSG*
Ga0137387_1022299723300012349Vadose Zone SoilAERIRLEHMKGMQNGIIRELSEAERGKDSDRVGRLEAEARELARAITDMERRG*
Ga0137386_1061120523300012351Vadose Zone SoilDDEVAVELAERIRLDHMKSRHSAIIRELSEAERGRDLEGVARLESEARELAHAINDLERRV*
Ga0137384_1148919723300012357Vadose Zone SoilAPPPNVDEEVAVELAERIRLDRMKGCHSGIIRELSEAERGQDSERVARLEAEARELGRVIADMERRG*
Ga0137361_1163298223300012362Vadose Zone SoilDEEVAVELAERIRLDRMKGRHSGIIRELSEAERGKDWERVARLEAEARELARAIAEMERRG*
Ga0134039_106011613300012374Grasslands SoilVAVELAERIRLDHMKGMHSGIIRELSEAERGRDSERVARLEAEARELARAITDMERRS*
Ga0134029_118828713300012377Grasslands SoilLAERIRLEHMKGMQNGIIRELSEAERGQDSERVAQLEAQARELGRAITDMERRS*
Ga0134025_116867213300012378Grasslands SoilEELAARLRLDRMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0134058_110336713300012379Grasslands SoilELAERIRLEHMKGMHSGIIRELSEAERGRDSDRVVRLEAEARELARAIKDMERRG*
Ga0134058_118358313300012379Grasslands SoilAAPPPNVDDEVAVELTERIRLDHMKGMHNGIIRELSEAERGRDSERVARLETEARELARAITDMERRS*
Ga0134043_132400023300012392Grasslands SoilDDEVAVELAERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRN*
Ga0134052_109584313300012393Grasslands SoilELAERIRLEHMKGMHSGIIRELSEAERGRDSERVLRLEAEARELARAIKDMERRG*
Ga0134055_106119913300012401Grasslands SoilPPPNVDDEVAVELAERIRLDHMKGRHSGIIRELSEAERGRDSDMVARLEAEARELGRAIQEMERRG*
Ga0134055_123781523300012401Grasslands SoilAVELAERIRLEHMKGMHSGIIRELSEAERGRDSERVARLETEARELARAITDMERRG*
Ga0134045_122050823300012409Grasslands SoilVDGQVAEELVARLRLDRMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS*
Ga0134045_140919013300012409Grasslands SoilERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRN*
Ga0137397_1037261613300012685Vadose Zone SoilSVDDQVAEELAVRVRLDHMKGLQSGIIRELSEAERGNDSERVGRLEAKARELARAINEMERSG*
Ga0137394_1109975313300012922Vadose Zone SoilPNIDDEVAIELAERIRLEHMKGMHSGIIRELSEAERGRDSERVARLEAEARELARAITDMERRS*
Ga0137407_1064382523300012930Vadose Zone SoilVAVGLAERIRLDHMRARHSGIIRELSEAERGKDSELVARLEAQAAELARAINEIERRN*
Ga0134075_1009465023300014154Grasslands SoilDDEVAVELAERIRLEHMKGMHSGIIRELSEAERGRDSDRVVRLEAEARELARAIKDMERRG*
Ga0167660_101289733300015078Glacier Forefield SoilVDDDLAVELAERIRLDRMKSRESAIIRELSEAERGRDVQGVGRLEAEARELAHAIGDLERRMSSSRE*
Ga0134112_1024942723300017656Grasslands SoilELAERIRLEHMKGMHSGIIRELSEAERGRDSERVVRLEAEARELARAIKDMERRG
Ga0066667_1224178323300018433Grasslands SoilERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRS
Ga0066662_1000803553300018468Grasslands SoilVAVELADRIRLEHMKGMHSGIIRELSEAERGKDSDRVGRLEAEARELARAIKDMERRG
Ga0193754_103128213300019872SoilAVELAERIRLDRMKGRHSAIIRELSEAERGRDSEGVGRLEAEARELAHAIGDLERRMSSSRE
Ga0193715_109569223300019878SoilVELADRIRLDRMKTREGAIIRELSEAERGRNVEGVARLEAEARELAHAIGDLERRMSSSR
Ga0193755_101532013300020004SoilVDDEVAVELAERIRLDRMKGRHSAIIRELSEAERGRDSEGVGRLEAEARELAHAIGDLERRMSSSRE
Ga0210382_1005341723300021080Groundwater SedimentMKSREGAIIRELSEAERGRDIQGVARLEAEARELAHAIGDLERRMSSSRE
Ga0210404_1029076123300021088SoilQQSVDYELAVELAQRIRLDHMKNRESAIIRELSEAERERDMGRVARLETEAKEIARAISELERRV
Ga0210408_1113914913300021178SoilAAPPPSVDDEVAVELAERIRLDHMKGLHSGIIRELSEAESGKDSERVARLEAKARELARAINELERRS
Ga0210409_1077284413300021559SoilSVDDEVAVELAERIRLDHMKGLHSGIIRELSEAESGKDSERVARLEADARELARAINELERRG
Ga0222623_1007735213300022694Groundwater SedimentDRIRLDRMKTREGAIIRELSEAERGRNVEGVARLEAEARELAHAIGDLERRMSSSRE
Ga0242665_1032495823300022724SoilAPPPNVDDEVAVELASRIRLDHMKGRHSGIIRELSEAERKQDATGVARLEAEARELAHAIQDLERRG
Ga0207692_1092443923300025898Corn, Switchgrass And Miscanthus RhizosphereLAEELVARIRLDRMKVRHSGIIRELSEAERGREADRVARLEAEASELARAINDMERSR
Ga0207684_1168823813300025910Corn, Switchgrass And Miscanthus RhizospherePPPSVDDDVAAELAERIRLDHMKGRHSGIIRELSEAERKQDTPGVARLEAEARELAHAIQDLERRV
Ga0207660_1080729423300025917Corn RhizosphereDEELAEWIRLDHMRGRHNGIIRELSEAERGKDSGRVAQLEAEARELARAISDMERRGESSRA
Ga0207664_1148719423300025929Agricultural SoilIRLEHMKGMHSGIIRQLSEAERGRDSERVAQLEAEARELARAISDMERRS
Ga0207664_1153299023300025929Agricultural SoilLAEELVVRIRLDRMKVRHSGIIRELSEAERGREADRVARLEAEASELARAINDMERSR
Ga0209840_108615923300026223SoilLAERIRLDRMKSRESAIIRELSEAERGRDVQGVGRLEAEARELAHAIGDLERRMSSSRE
Ga0209880_100579113300026271SoilRLDHMKGLHSGIIRELSEAESGKDSERVARLEAKARELARAINDLERRS
Ga0209880_102216323300026271SoilRLDHMKGLHSGIIRELSEAESGKDSERVARLEAEARELARAINELERRS
Ga0209235_111530913300026296Grasslands SoilAERIRLEHMKGMHSGIIRELSEAERGRDSERVARLEAEARELARAITDMERRS
Ga0209686_117083523300026315SoilDDEVAIELAERIRLEHMKGMHSGIIRELSEAERGRDSERVARLEAEARELSRAITDMERR
Ga0209266_105093223300026327SoilVAVELAERIRLEHMKGMHSGIIRELSEAERGQDSEGVVRLEAEARELARAIKDMERRGQISRG
Ga0209266_117287423300026327SoilVAEELVARLRLDRMKGRHSGIIRELSEAERGREAERVARLEAEARELARAINDMERSS
Ga0209159_110392723300026343SoilAERIRLEHMKGMQNGIIRELSEAERGRDSERVAQLEAQARELGRAITDMERRN
Ga0209690_109869723300026524SoilRLEHMKGMHSGIIRQLSEAERGKDSEKVAQLEAEAREIYRAIADMERRG
Ga0208995_102053523300027388Forest SoilPPSVDDDVAEELAVRVRLDHMKGLHSGIIRELSEAERGNDSERVGRLEAKARELARAINEMERSG
Ga0208993_101837923300027480Forest SoilPPNVDDDVAEELAVRIRLDHMRALHSGIIRELSEAERGKDSELVTRLEAQAGELARAINDIERRG
Ga0209009_102759613300027667Forest SoilSVDDEVAVELAERIRLDHMKGLHSGIIRELSEAESGKDSERVARLEAKARELARAINELERRS
Ga0209178_127813413300027725Agricultural SoilLADRIRLEHMKGMHSGIIRELSEAERGLDSEKVVRLEAEARELARAIRELERRG
Ga0209580_1014700113300027842Surface SoilSVDDDLAVELADRIRLERMKGMHSGIIRELSEAERGRDSERVARLEAEARELARAIEAASTDIERRS
Ga0209168_1053176523300027986Surface SoilDEVAEDLADRIRLEHMKGMHSGIIRELSEAERGRDSDRVARLEAQARELARAITDMERRG
Ga0137415_1042936623300028536Vadose Zone SoilVDEEVAVELAERIRLDHMRGRHSGIIRELSEAERGKDSERVARLEAEARELFRAINDIERRG
Ga0307310_1062684213300028824SoilIRLDRMKTREGAIIRELSEAERGRNVEGVARLEAEARELAHAIGDLERRMSSSRE
Ga0307468_10034302613300031740Hardwood Forest SoilLDHMKGMHSGIIRELSEAERGRDSERVARLETEARELARAITDMERRG
Ga0307468_10205828913300031740Hardwood Forest SoilRLDRMKGRHSAIIRELSEAERGRDSEGVGRLEAEARELAHAIGDLERRMSSSRE
Ga0307471_10140730023300032180Hardwood Forest SoilDEEVAVELAERIRLDHMKGRHSGIIRELSEAERGKDSERVARLEAEARELARAIADMERR
Ga0307471_10310160113300032180Hardwood Forest SoilTVDDELAIELADRIRLEHMKGMHSGIIRELSEAERGRDSERVARLESEARELRRAITDMERRGQTSRA
Ga0306920_10427438413300032261SoilEDEVAVELAERIRLEHMKGMHSGIIRQLSEAERGRDSESVARLESQARELARAITDMERR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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