Metagenome Family F079770

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079770
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	67 residues
Representative Sequence	VQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Number of Associated Samples	77
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	84.35 %
% of genes from short scaffolds (< 2000 bps)	74.78 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.130 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.696 % of family members)
Environment Ontology (ENVO)	Unclassified (71.304 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.696 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.30% β-sheet: 0.00% Coil/Unstructured: 83.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF02652	Lactate_perm	68.70
PF02754	CCG	3.48
PF07635	PSCyt1	2.61
PF13545	HTH_Crp_2	1.74
PF08241	Methyltransf_11	0.87
PF11854	MtrB_PioB	0.87
PF00582	Usp	0.87
PF04945	YHS	0.87
PF00873	ACR_tran	0.87
PF04972	BON	0.87
PF02913	FAD-oxidase_C	0.87
PF02589	LUD_dom	0.87
PF00034	Cytochrom_C	0.87
PF13183	Fer4_8	0.87
PF00037	Fer4	0.87
PF11604	CusF_Ec	0.87
PF06147	DUF968	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1620	L-lactate permease	Energy production and conversion [C]	68.70
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	3.48
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	3.48
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.13 %
Unclassified	root	N/A	20.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.13 %
Unclassified	root	N/A	20.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.13 %
Unclassified	root	N/A	20.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.22 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.48 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.87 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4.35 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	3.48 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.87 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.87 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	3.48 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.61 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	1.74 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.87 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.87 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	3.48 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.61 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1.74 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.87 %
Pseudomonas fluorescens group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group	3.48 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.61 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	1.74 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.87 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.87 %
Pseudomonas fluorescens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	3.48 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.61 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	1.74 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	0.87 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.87 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101851655	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1022916	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300005332\|Ga0066388_100074348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3726	Open in IMG/M
3300005332\|Ga0066388_101780357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1094	Open in IMG/M
3300005332\|Ga0066388_102615395	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300005332\|Ga0066388_106167705	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005764\|Ga0066903_106385761	Not Available	615	Open in IMG/M
3300010037\|Ga0126304_10276147	All Organisms → cellular organisms → Bacteria → Proteobacteria	1109	Open in IMG/M
3300010048\|Ga0126373_11597432	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300010359\|Ga0126376_10210857	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300010359\|Ga0126376_12141089	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300010360\|Ga0126372_10773773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300010366\|Ga0126379_11883213	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012199\|Ga0137383_10886461	All Organisms → cellular organisms → Bacteria → Proteobacteria	651	Open in IMG/M
3300012201\|Ga0137365_10260960	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300012204\|Ga0137374_10127876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	2320	Open in IMG/M
3300012204\|Ga0137374_10170184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1917	Open in IMG/M
3300012355\|Ga0137369_10099370	All Organisms → cellular organisms → Bacteria	2392	Open in IMG/M
3300012359\|Ga0137385_10902350	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300012359\|Ga0137385_10913189	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012360\|Ga0137375_10141391	All Organisms → cellular organisms → Bacteria	2367	Open in IMG/M
3300016294\|Ga0182041_11394525	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300016294\|Ga0182041_11509478	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300016341\|Ga0182035_10988806	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300016371\|Ga0182034_11801577	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300016387\|Ga0182040_10933443	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300016387\|Ga0182040_11627566	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300016404\|Ga0182037_11351555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300016422\|Ga0182039_11057858	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300016422\|Ga0182039_11100132	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300016445\|Ga0182038_10129252	All Organisms → cellular organisms → Bacteria	1892	Open in IMG/M
3300016445\|Ga0182038_10913148	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300016445\|Ga0182038_11108792	Not Available	703	Open in IMG/M
3300016445\|Ga0182038_11171373	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300021560\|Ga0126371_12084753	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300026981\|Ga0207822_1027954	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031545\|Ga0318541_10043393	All Organisms → cellular organisms → Bacteria → Proteobacteria	2284	Open in IMG/M
3300031546\|Ga0318538_10536678	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031561\|Ga0318528_10477794	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300031572\|Ga0318515_10139947	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300031573\|Ga0310915_10602736	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300031573\|Ga0310915_11137870	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031640\|Ga0318555_10133053	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300031668\|Ga0318542_10000875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	8458	Open in IMG/M
3300031668\|Ga0318542_10184046	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300031679\|Ga0318561_10126291	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300031679\|Ga0318561_10466175	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031680\|Ga0318574_10865689	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031681\|Ga0318572_10067291	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300031681\|Ga0318572_10567359	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031682\|Ga0318560_10205380	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300031719\|Ga0306917_11163208	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031719\|Ga0306917_11236437	Not Available	579	Open in IMG/M
3300031736\|Ga0318501_10123573	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300031736\|Ga0318501_10300511	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300031748\|Ga0318492_10291351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	848	Open in IMG/M
3300031764\|Ga0318535_10530015	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031768\|Ga0318509_10592674	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031771\|Ga0318546_10888816	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300031777\|Ga0318543_10066373	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300031778\|Ga0318498_10074456	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300031778\|Ga0318498_10174541	Not Available	977	Open in IMG/M
3300031779\|Ga0318566_10435291	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300031781\|Ga0318547_10151319	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300031781\|Ga0318547_10745651	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300031793\|Ga0318548_10282012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	816	Open in IMG/M
3300031795\|Ga0318557_10018076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2706	Open in IMG/M
3300031797\|Ga0318550_10074757	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300031798\|Ga0318523_10231884	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300031805\|Ga0318497_10468753	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031819\|Ga0318568_10691134	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031845\|Ga0318511_10266424	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300031890\|Ga0306925_10020613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	6571	Open in IMG/M
3300031890\|Ga0306925_11278550	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031912\|Ga0306921_11013171	Not Available	936	Open in IMG/M
3300031941\|Ga0310912_11099772	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031941\|Ga0310912_11496539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	508	Open in IMG/M
3300031946\|Ga0310910_10805560	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300031959\|Ga0318530_10049089	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300032025\|Ga0318507_10299373	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300032042\|Ga0318545_10150477	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300032043\|Ga0318556_10305559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	832	Open in IMG/M
3300032044\|Ga0318558_10086608	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300032052\|Ga0318506_10438853	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300032055\|Ga0318575_10200316	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300032055\|Ga0318575_10282159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas fluorescens group → Pseudomonas fluorescens	839	Open in IMG/M
3300032064\|Ga0318510_10071285	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300032064\|Ga0318510_10127671	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300032076\|Ga0306924_10228334	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300032076\|Ga0306924_11340747	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300032076\|Ga0306924_12585370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	507	Open in IMG/M
3300032090\|Ga0318518_10126769	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300032091\|Ga0318577_10001030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	8855	Open in IMG/M
3300032091\|Ga0318577_10007124	All Organisms → cellular organisms → Bacteria → Proteobacteria	4230	Open in IMG/M
3300032261\|Ga0306920_102834869	Not Available	659	Open in IMG/M
3300033289\|Ga0310914_11059384	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300033289\|Ga0310914_11095433	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.65%
Host-Associated	Host-Associated	4.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.65%
Plants	Host-Associated → Plants	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.43%
Loam	Environmental → Terrestrial → Soil → Loam	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.22%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018516551	3300000364	Soil	AVAAAPAAQAIQDCSAFYDDYAVRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW*
AP72_2010_repI_A100DRAFT_10229161	3300000837	Forest Soil	DDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW*
JGI10216J12902_1036944712	3300000956	Soil	WGSGPGTSVGFGTFEGALPRYPINEFPNWYGDCLNWGHYSATGTAFGSGR*
Ga0066388_1000743481	3300005332	Tropical Forest Soil	RPAPAAAAQAVPVQDCSVFYADSQRGFGWGSGPGRSVGFGTFEGALPRYPDNSFPNWYGLCREWGHYSSTGSPRW*
Ga0066388_1017803571	3300005332	Tropical Forest Soil	RGFGWGSGPGSSVGFGAFEGALPRYPPNSFPNWYGDCVNWGHYSATGSPRW*
Ga0066388_1026153951	3300005332	Tropical Forest Soil	AIQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW*
Ga0066388_1061677051	3300005332	Tropical Forest Soil	NCTVFYEPYYIRGFGWGSGPGLGVGFGTFEGAFPEYPSNSFPNWYGACVTWGPYSATGSAR*
Ga0066903_1063857611	3300005764	Tropical Forest Soil	AEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW*
Ga0075428_1000540838	3300006844	Populus Rhizosphere	MIKTIVAAVSLAAVCLPGFANAADVKAKPAVVAAPVVVPVQDCSAFYDDYARRGFTWGVGPGLGVGFGTLEGALPRYPLNEFPNWYGLCEQWGRYSAAGAARW*
Ga0126304_102761471	3300010037	Serpentine Soil	DYARPGFTWGVGPGRGIGFGTLEGSLPRYPANEFPNWYGLCQNWGRYSATGSARW*
Ga0126373_115974322	3300010048	Tropical Forest Soil	AAAGAAVAAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALSRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR*
Ga0126376_102108572	3300010359	Tropical Forest Soil	AFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR*
Ga0126376_121410892	3300010359	Tropical Forest Soil	CSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW*
Ga0126372_107737731	3300010360	Tropical Forest Soil	DVKASPAIAAPVVAPVQDCSVFYDDYARRGFTWGSGPGTSIGLGTFEGALPRYPPNSFPNWYGECAQWGHYSASGTARR*
Ga0126379_118832132	3300010366	Tropical Forest Soil	DDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGIGR*
Ga0137383_108864611	3300012199	Vadose Zone Soil	PAAAPSAAVRVADCSAFYDDYRRRGFGWGVGPGSSIGFGAFEGALPRYKKNEFPNWYGSCVNWGHYSSSGSAPF*
Ga0137365_102609601	3300012201	Vadose Zone Soil	FYDDYAVRGWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAAPW*
Ga0137365_112613731	3300012201	Vadose Zone Soil	RGWGWGSGPGTSVGFGTFEGALPRYPANEFPNWYGDCVNWGNYSATGSARW*
Ga0137374_101278761	3300012204	Vadose Zone Soil	LLAGTANAKDVRTKPAAAGATVAAAPAAEPVQDCSAFYDDYAVRGWGWGSGPGTSVGFGTFEGALPRYPINEFPNWYGDCVNWGNYSATGSARW*
Ga0137374_101701843	3300012204	Vadose Zone Soil	DQVAKATPVAPAAAPSAAVRVADCSAFYDDYRRRGFGWGVGPGSSIGFGAFEGALPRYKKNEFPNWYGSCVNWGHYSSSGSAPF*
Ga0137369_100993703	3300012355	Vadose Zone Soil	FYDDYAVRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW*
Ga0137369_107365412	3300012355	Vadose Zone Soil	AVPVQDCSTFYDDNARRGFGWGSGPGSSLGFGTFEGALPRYPANEFPNWYGACLTWGHYSATGSARW*
Ga0137368_102127061	3300012358	Vadose Zone Soil	RGRPVAAVAAAAPAVPVQDCSTFYDDNARRGFGWGSGPGSSLGFGTFEGALPRYPANEFPNWYGACLTWGHYSATGSARW*
Ga0137385_109023502	3300012359	Vadose Zone Soil	KDVRTKPAAAGAAVATAPAVEPVQDCSAFYDDYAVRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW*
Ga0137385_109131892	3300012359	Vadose Zone Soil	LAGTANAKDVRTKPAAAGAAVAAAPAVEPVQDCSAFYDDYAVRGWGWGSGPGTSVGFGTFEGALPRYPANEFPNWYGDCVNWGHYSATGSAAPW*
Ga0137375_101413911	3300012360	Vadose Zone Soil	VRGWGWGSGPGTSVGYGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW*
Ga0137375_113629302	3300012360	Vadose Zone Soil	AAVVTEVRVQDCSVFYDDYRRRGFGWGSGPGSSLGFGTFEGALPRYPANSFPNWYGTCLNWGHYSAAKSVRW*
Ga0132258_139221201	3300015371	Arabidopsis Rhizosphere	ALEARAADVKAPVVAAPVLVVPAQDCSAFYDDYANRGFGWGSGPGSSLGFGAFEGALNRYPPDSFPNWYGACVTWGRYSASGRASRW*
Ga0132256_1036089351	3300015372	Arabidopsis Rhizosphere	PPPVVVLVEPVQDCSAFYDDYSRRGFGWGSGPGTSVGFGTFEGALPRYTKNSFPNWYGSCLNWGHYSAAKAVRY*
Ga0132257_1022121512	3300015373	Arabidopsis Rhizosphere	VIVEPVQDCSAFYDDYSRRGFGWGSGPGTSVGFGTFEGALPRYTKNSFPNWYGSCLNWGHYSAAKAVRY*
Ga0182041_113945251	3300016294	Soil	QDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGNYSATGSARW
Ga0182041_115094782	3300016294	Soil	FYDDYAVRGWGWGSGPGTSAGFGTFGGALPRYPLNSFPNWYGDCVNWGHYSATGSAAPW
Ga0182035_109888061	3300016341	Soil	EPVQDCSVFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0182034_118015772	3300016371	Soil	WGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAAPW
Ga0182040_109334432	3300016387	Soil	FYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSG
Ga0182040_116275662	3300016387	Soil	YARRGWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGNYSATGSARW
Ga0182037_113515552	3300016404	Soil	QDCSSFYDPYDSRGFGPGSVPGVGVGFGTFEGALPMYPQDNSFPNWYGACVTWGRYNAAGSAPK
Ga0182039_110578581	3300016422	Soil	AFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0182039_111001321	3300016422	Soil	DYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0182038_101292522	3300016445	Soil	VQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGNYSATGSARW
Ga0182038_109131481	3300016445	Soil	PVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAHW
Ga0182038_111087921	3300016445	Soil	DCSEFYESYYYRGFGWGSSPASGLGFGTFEDALPMYPSNSFPNWYGACARRGRYSATGTA
Ga0182038_111713732	3300016445	Soil	AFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0126371_120847532	3300021560	Tropical Forest Soil	AAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAHW
Ga0207822_10279541	3300026981	Tropical Forest Soil	DPYSYRGFGWGSGPDSSLGFGTFEGAFAAYPMNSFPNWYGLCETWGHYSATGSAPR
Ga0209382_104939452	3300027909	Populus Rhizosphere	MIKTIVAAVSLAAVCLPGFANAADVKAKPAVVAAPVVVPVQDCSAFYDDYARRGFTWGVGPGLGVGFGTLEGALPRYPLNEFPNWYGLCEQWGRYSAAGAARW
Ga0318541_100433931	3300031545	Soil	AEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318538_105366782	3300031546	Soil	VQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318528_102041992	3300031561	Soil	GWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAHW
Ga0318528_104777941	3300031561	Soil	ARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAHW
Ga0318515_101399471	3300031572	Soil	VRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0310915_106027362	3300031573	Soil	KDVRTKPAAAGAAVAAAPAAEPVQDCSVFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0310915_111378702	3300031573	Soil	DYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAHW
Ga0318555_101330532	3300031640	Soil	QDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318542_100008751	3300031668	Soil	CSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318542_101840461	3300031668	Soil	AKDVRTRPAAAGAAVATAPAAEPVQDCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318561_101262911	3300031679	Soil	DCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318561_104661751	3300031679	Soil	AEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0318574_108656891	3300031680	Soil	QDCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318572_100672911	3300031681	Soil	PTAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318572_105673591	3300031681	Soil	GAAVVAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318572_106850551	3300031681	Soil	GWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGNYSATGSARW
Ga0318560_102053801	3300031682	Soil	AEPVQDCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0306917_111632082	3300031719	Soil	DDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0306917_112364371	3300031719	Soil	YRTRGFGWGSGPGLGVGFGTFEGALPLYPQNEFPNWYGSCVNWGHYSSTGTAR
Ga0318501_101235731	3300031736	Soil	VRTKPAAAGAAVAAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318501_103005111	3300031736	Soil	FYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318492_102913512	3300031748	Soil	VQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318494_109526042	3300031751	Soil	PPERVQDCSHFADPYSYRGFGWGSGPDSSLGFGTFEGAFAAYPMDSFPNWYGLCETWGHYSATGSAPR
Ga0318535_105300152	3300031764	Soil	TAPAAEPVQDCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318509_105926741	3300031768	Soil	ANAKDVWTKPAAAGAAVAAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318546_108888162	3300031771	Soil	DDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAHW
Ga0318543_100663732	3300031777	Soil	FYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGTAFGSG
Ga0318498_100744561	3300031778	Soil	VAAAPAAEAIQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318498_101745411	3300031778	Soil	APITIIGRVQDCSRFYDPYRIRGFGWGSGPGLGVGFGTFEGALPLYPRNEFPNWYGSCVNWGHYSSSGTAR
Ga0318566_104352911	3300031779	Soil	PVQDCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318547_101513191	3300031781	Soil	DYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318547_107456512	3300031781	Soil	YARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318548_102820122	3300031793	Soil	RGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318557_100180761	3300031795	Soil	AAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318550_100747572	3300031797	Soil	VAAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318523_102318841	3300031798	Soil	AEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318497_104687531	3300031805	Soil	DCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAAPW
Ga0318568_106911341	3300031819	Soil	QDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318511_102664242	3300031845	Soil	PAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0306925_100206131	3300031890	Soil	RRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0306925_112785501	3300031890	Soil	DDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0306921_110131712	3300031912	Soil	PIWIAERVENCSVFYEPYRIRGFGWGSGPGLGVGFGTFEGALPRYPLNSFPNWYGACKRWGRYSATGSAR
Ga0306921_115666921	3300031912	Soil	RGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0306921_116549171	3300031912	Soil	ADVKAKPGAAAAPVVVERVQDCSAFYDDYAVRGFGWGSGPGTSVGFGTFEGALPRVPLNAFPNWHGECVNWGHYSATGTAKPP
Ga0310912_110997721	3300031941	Soil	FYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0310912_114965392	3300031941	Soil	PAAAGAAVAAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAHW
Ga0310910_108055601	3300031946	Soil	DCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318530_100490892	3300031959	Soil	CSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAR
Ga0318507_102993731	3300032025	Soil	EPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGNYSATGSARW
Ga0318545_101504772	3300032042	Soil	GWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318556_103055591	3300032043	Soil	AAEAIQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318558_100866081	3300032044	Soil	FYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGNYSATGSARW
Ga0318506_104388532	3300032052	Soil	EAIQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGNYSATGSARW
Ga0318575_102003161	3300032055	Soil	FYDDYARRGWGWGSGPGTSAGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSAHW
Ga0318575_102440921	3300032055	Soil	RGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0318575_102821591	3300032055	Soil	PAAAGAAVATAPAAEPVQDCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0318510_100712851	3300032064	Soil	GSAAGAAVAAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318510_101276711	3300032064	Soil	SCTGSAAGAAVATAPAAEPVQDCSAFYDDYAVRGWGWGSGPGTSAGFGTFEGALPRYPLNSFPNWYGDCVNWGHYSATGSAHW
Ga0306924_102283341	3300032076	Soil	ATANAKDVRTKPAAAGAAVAAVPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0306924_104403444	3300032076	Soil	AAQPATSPPPERVQDCSHFADPYSYRGFGWGSGPDSSLGFGTFEGAFAAYPMDSFPNWYGLCETWGHYSATGSAPR
Ga0306924_113407472	3300032076	Soil	AAAPAAEPVQDCSVFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0306924_125853701	3300032076	Soil	PTGAAVIAAPAIEPVQNCSVFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCLNWGHYSATGTAFGSGR
Ga0318518_101267691	3300032090	Soil	VAAAPAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNSFPNWYGDCVNWGNYSATGSARW
Ga0318577_100010309	3300032091	Soil	APAAEPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGHYSATGTAFGSGR
Ga0318577_100071241	3300032091	Soil	IQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW
Ga0306920_1021258902	3300032261	Soil	EAPVRKAAPAPAATVVERVQDCSAFYDPYLSRGFGWGSGPGLGVGMGAFEGALPRYPSDSFPNWYGECLTWGHYSATGSAR
Ga0306920_1028348692	3300032261	Soil	EAADVKAKPGAAAAPVVVERVQDCSAFYDDYAVRGFGWGSGPGTSVGFGTFEGALPRVPLNSFPNWHGECVNWGHYSATGTAKPP
Ga0310914_110593842	3300033289	Soil	AEPVQDCSVFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPLNEFPNWYGDCVNWGNYSATGTAFGSGR
Ga0310914_110954332	3300033289	Soil	EPVQDCSAFYDDYARRGWGWGSGPGTSVGFGTFEGALPRYPVNEFPNWYGDCVNWGNYSATGSARW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079770

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences