Metagenome / Metatranscriptome Family F079768

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079768
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	64 residues
Representative Sequence	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDYAEEEGALT
Number of Associated Samples	69
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.83 %
% of genes near scaffold ends (potentially truncated)	19.13 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.087 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (28.696 % of family members)
Environment Ontology (ENVO)	Unclassified (41.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.826 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.26% β-sheet: 11.96% Coil/Unstructured: 84.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13730	HTH_36	1.74
PF04392	ABC_sub_bind	1.74
PF08028	Acyl-CoA_dh_2	1.74
PF13360	PQQ_2	1.74
PF02796	HTH_7	1.74
PF12867	DinB_2	1.74
PF00561	Abhydrolase_1	1.74
PF13191	AAA_16	0.87
PF14690	zf-ISL3	0.87
PF01384	PHO4	0.87
PF13489	Methyltransf_23	0.87
PF09084	NMT1	0.87
PF14319	Zn_Tnp_IS91	0.87
PF02371	Transposase_20	0.87
PF02433	FixO	0.87
PF04978	DUF664	0.87
PF00128	Alpha-amylase	0.87
PF10258	PHAX_RNA-bd	0.87
PF01850	PIN	0.87
PF01695	IstB_IS21	0.87
PF13546	DDE_5	0.87
PF03255	ACCA	0.87
PF12844	HTH_19	0.87
PF03400	DDE_Tnp_IS1	0.87
PF04185	Phosphoesterase	0.87
PF00119	ATP-synt_A	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.74
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.74
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.87
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.87
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.87
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.87
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.87
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.87
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.87
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.87
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.87
COG2993	Cbb3-type cytochrome oxidase, cytochrome c subunit FixO	Energy production and conversion [C]	0.87
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.87
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.87
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.87
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
All Organisms	root	All Organisms	33.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
cellular organisms	root	All Organisms → cellular organisms	33.04 %
Viruses	superkingdom	All Organisms → Viruses	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.09 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.74 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.87 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.87 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.74 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.87 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.87 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.87 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.87 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.87 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.87 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.87 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.87 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.87 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.87 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.87 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.87 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.87 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.87 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.87 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.87 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.87 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.87 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.87 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.87 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.87 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.87 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.87 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.87 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.87 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.87 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.87 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.09 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.87 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.87 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.87 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.87 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.87 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.87 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.87 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.87 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.87 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.87 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0973340	Not Available	1198	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0326242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	752	Open in IMG/M
3300000550\|F24TB_11273419	Not Available	1195	Open in IMG/M
3300004801\|Ga0058860_12157096	Not Available	896	Open in IMG/M
3300005289\|Ga0065704_10256927	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005289\|Ga0065704_10355906	Not Available	804	Open in IMG/M
3300005332\|Ga0066388_100597593	Not Available	1726	Open in IMG/M
3300005332\|Ga0066388_100603774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1719	Open in IMG/M
3300005332\|Ga0066388_100931681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1442	Open in IMG/M
3300005332\|Ga0066388_103650598	Not Available	785	Open in IMG/M
3300005332\|Ga0066388_107107038	Not Available	563	Open in IMG/M
3300005341\|Ga0070691_10374348	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300005466\|Ga0070685_11266414	Not Available	562	Open in IMG/M
3300005471\|Ga0070698_100240077	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1745	Open in IMG/M
3300005545\|Ga0070695_101900295	Not Available	500	Open in IMG/M
3300005719\|Ga0068861_101428145	Not Available	677	Open in IMG/M
3300005764\|Ga0066903_100510843	Not Available	2041	Open in IMG/M
3300005764\|Ga0066903_100581990	All Organisms → cellular organisms → Bacteria	1932	Open in IMG/M
3300005764\|Ga0066903_100869965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	1625	Open in IMG/M
3300005764\|Ga0066903_100997307	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300005764\|Ga0066903_101375377	Not Available	1324	Open in IMG/M
3300005764\|Ga0066903_101638156	Not Available	1222	Open in IMG/M
3300005764\|Ga0066903_106985747	Not Available	585	Open in IMG/M
3300005764\|Ga0066903_109117531	Not Available	501	Open in IMG/M
3300005937\|Ga0081455_10295342	Not Available	1165	Open in IMG/M
3300005981\|Ga0081538_10102473	Not Available	1435	Open in IMG/M
3300005983\|Ga0081540_1157300	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	887	Open in IMG/M
3300005985\|Ga0081539_10214452	Not Available	880	Open in IMG/M
3300006049\|Ga0075417_10024694	All Organisms → cellular organisms → Bacteria	2434	Open in IMG/M
3300006844\|Ga0075428_100102436	All Organisms → cellular organisms → Bacteria	3121	Open in IMG/M
3300006844\|Ga0075428_100217724	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300006845\|Ga0075421_100070222	All Organisms → cellular organisms → Bacteria	4421	Open in IMG/M
3300006845\|Ga0075421_101889159	Not Available	640	Open in IMG/M
3300006846\|Ga0075430_100378925	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300006847\|Ga0075431_101572212	Not Available	616	Open in IMG/M
3300006847\|Ga0075431_102240480	Not Available	500	Open in IMG/M
3300006853\|Ga0075420_100731208	Not Available	853	Open in IMG/M
3300006854\|Ga0075425_101348091	Not Available	808	Open in IMG/M
3300006969\|Ga0075419_10436154	Not Available	902	Open in IMG/M
3300009094\|Ga0111539_10238505	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2116	Open in IMG/M
3300009100\|Ga0075418_10834032	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300009100\|Ga0075418_11624133	Not Available	702	Open in IMG/M
3300009100\|Ga0075418_12562391	Not Available	557	Open in IMG/M
3300009156\|Ga0111538_11038519	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1037	Open in IMG/M
3300009156\|Ga0111538_11086939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1011	Open in IMG/M
3300009156\|Ga0111538_13997025	Not Available	509	Open in IMG/M
3300009177\|Ga0105248_10484695	Not Available	1394	Open in IMG/M
3300009553\|Ga0105249_10069021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3261	Open in IMG/M
3300009553\|Ga0105249_10585933	Not Available	1169	Open in IMG/M
3300009553\|Ga0105249_11008213	Not Available	901	Open in IMG/M
3300009792\|Ga0126374_11084032	Not Available	634	Open in IMG/M
3300010040\|Ga0126308_10545226	Not Available	787	Open in IMG/M
3300010041\|Ga0126312_10565323	Not Available	816	Open in IMG/M
3300010042\|Ga0126314_10127815	Not Available	1753	Open in IMG/M
3300010043\|Ga0126380_10288076	Not Available	1161	Open in IMG/M
3300010043\|Ga0126380_10976600	Not Available	711	Open in IMG/M
3300010043\|Ga0126380_11664304	Not Available	572	Open in IMG/M
3300010046\|Ga0126384_11226887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	693	Open in IMG/M
3300010047\|Ga0126382_10074308	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2097	Open in IMG/M
3300010047\|Ga0126382_11288046	Not Available	660	Open in IMG/M
3300010047\|Ga0126382_11670644	Not Available	593	Open in IMG/M
3300010047\|Ga0126382_12106366	Not Available	540	Open in IMG/M
3300010145\|Ga0126321_1430476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1741	Open in IMG/M
3300010358\|Ga0126370_10425259	Not Available	1099	Open in IMG/M
3300010358\|Ga0126370_10720556	Not Available	879	Open in IMG/M
3300010359\|Ga0126376_10338649	Not Available	1327	Open in IMG/M
3300010360\|Ga0126372_10381042	All Organisms → cellular organisms → Bacteria → Proteobacteria	1279	Open in IMG/M
3300010360\|Ga0126372_10542484	Not Available	1102	Open in IMG/M
3300010360\|Ga0126372_10687810	Not Available	996	Open in IMG/M
3300010362\|Ga0126377_10969167	Not Available	916	Open in IMG/M
3300010362\|Ga0126377_11209798	Not Available	826	Open in IMG/M
3300010362\|Ga0126377_11434398	Not Available	763	Open in IMG/M
3300010362\|Ga0126377_12003439	Not Available	655	Open in IMG/M
3300010362\|Ga0126377_12095779	Not Available	642	Open in IMG/M
3300010362\|Ga0126377_12982423	Not Available	546	Open in IMG/M
3300010366\|Ga0126379_11434945	Not Available	796	Open in IMG/M
3300010366\|Ga0126379_11466607	Not Available	788	Open in IMG/M
3300010375\|Ga0105239_10912189	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300010398\|Ga0126383_11398125	Not Available	790	Open in IMG/M
3300010398\|Ga0126383_12026089	Not Available	663	Open in IMG/M
3300012208\|Ga0137376_11376275	Not Available	596	Open in IMG/M
3300012212\|Ga0150985_119320787	Not Available	727	Open in IMG/M
3300012469\|Ga0150984_119394124	Not Available	544	Open in IMG/M
3300012948\|Ga0126375_10285945	Not Available	1136	Open in IMG/M
3300012948\|Ga0126375_10436173	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300012948\|Ga0126375_10596626	Not Available	843	Open in IMG/M
3300012948\|Ga0126375_10639597	Not Available	819	Open in IMG/M
3300012971\|Ga0126369_10082254	All Organisms → cellular organisms → Bacteria	2861	Open in IMG/M
3300012971\|Ga0126369_10175749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2041	Open in IMG/M
3300012971\|Ga0126369_12070328	Not Available	657	Open in IMG/M
3300012971\|Ga0126369_13417051	Not Available	520	Open in IMG/M
3300013306\|Ga0163162_10060495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3823	Open in IMG/M
3300013308\|Ga0157375_10704574	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300015371\|Ga0132258_11936128	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1484	Open in IMG/M
3300025945\|Ga0207679_11695887	Not Available	578	Open in IMG/M
3300025961\|Ga0207712_10270988	Not Available	1381	Open in IMG/M
3300025961\|Ga0207712_12030220	Not Available	515	Open in IMG/M
3300026118\|Ga0207675_102172910	Not Available	570	Open in IMG/M
3300027873\|Ga0209814_10011829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3441	Open in IMG/M
3300027874\|Ga0209465_10039232	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	2249	Open in IMG/M
3300027880\|Ga0209481_10081981	Not Available	1539	Open in IMG/M
3300027907\|Ga0207428_10220345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1422	Open in IMG/M
3300027907\|Ga0207428_10271861	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300027909\|Ga0209382_10005992	All Organisms → cellular organisms → Bacteria	15700	Open in IMG/M
3300027909\|Ga0209382_10210124	All Organisms → Viruses → Predicted Viral	2226	Open in IMG/M
3300028889\|Ga0247827_10876549	Not Available	601	Open in IMG/M
3300031547\|Ga0310887_11137969	Not Available	502	Open in IMG/M
3300032075\|Ga0310890_11529070	Not Available	551	Open in IMG/M
3300032205\|Ga0307472_101833361	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300033551\|Ga0247830_11464152	Not Available	546	Open in IMG/M
3300034661\|Ga0314782_107149	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300034663\|Ga0314784_103225	Not Available	597	Open in IMG/M
3300034663\|Ga0314784_150449	Not Available	527	Open in IMG/M
3300034665\|Ga0314787_008793	Not Available	1271	Open in IMG/M
3300034678\|Ga0314803_082751	Not Available	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.00%
Host-Associated	Host-Associated	40.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.13%
Plants	Host-Associated → Plants	39.13%
Aquatic	Environmental → Aquatic	0.87%
Human	Host-Associated → Human	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.70%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Digestive System	Host-Associated → Human → Digestive System	0.87%
Roots	Host-Associated → Plants → Roots	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.83%
Loam	Environmental → Terrestrial → Soil → Loam	16.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.87%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.87%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.87%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	28.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.87%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.22%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.87%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.87%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.87%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.87%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.87%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09733402	2228664022	Soil	MTIHDAGEGQRVGCRTCDVVFRDRTSDALARVPCPVCGLAGAVIRLPIPDTWPTDYAEEETIK
ICChiseqgaiiDRAFT_03262421	3300000033	Soil	MTIHDEGEGQRVGCRTCDVVFRDRTSDAMALVPCPVCGLAGAVISLPIPDTW
F24TB_112734191	3300000550	Soil	MTIHHGGEGQRVGCRTCDVVFRDRTIGNLARVPCPVCGLEGEVISLPMPDTWPSDYADEEGAIK*
Ga0058860_121570961	3300004801	Host-Associated	MTIHGGGEGQRVGCRTCDVVFRDRTTGNLALVPCPVCGLAGEVISLPRPDTWPSDEADEEGAIR*
Ga0065704_102569271	3300005289	Switchgrass Rhizosphere	MTTNLGGEGQRVGCRACDVVFRDRTAESLALVPCPACGLQGEVISLPIPDTWPSDYAGEEGSIK*
Ga0065704_103559061	3300005289	Switchgrass Rhizosphere	MTIYRGGEGQRVGCRACNVVFRDTTTSDLALALCPVCDVQGEVISLPMTDTWPSDYADEEGALK*
Ga0066388_1005975932	3300005332	Tropical Forest Soil	MTPRFGDEGQRVGCRACNVVFRDRTTQSLALVSCPVCDLQGAVISLPIPNTWPSDSAEDEEMIKYPPVL*
Ga0066388_1006037742	3300005332	Tropical Forest Soil	MPPTFGDEDQRVGCRACNVVFRARTTQSLALVPCPVCDLQGQVIRLPLPNTWPNDYAEDEETIQ*
Ga0066388_1009316813	3300005332	Tropical Forest Soil	MTIHEAGEGQRVGCRTCDVVFRDRTSDDLTRVPCPVCGRAGEVIRLPRPDTWPTDYAEEETRT*
Ga0066388_1036505981	3300005332	Tropical Forest Soil	MTPRFGDEGQRVGCRTCNVVFRDRTTQSLALVSCPVCDLQRAVVSLPIPNTWPSDSAEDEEMIKYPPVL*
Ga0066388_1071070381	3300005332	Tropical Forest Soil	MTPMFGDEGQRVGCRACNIVFRDRTTQSLTLVSCPVCDLQGAVISLPIPNTWPSDAAEDEEMIQSPPVL*
Ga0070691_103743482	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GEGQRVGCRTCDVVFRDRTTGNLALVPCPVCGLAGEVISLPRPDTWPSDEADEEGAIR*
Ga0070685_112664141	3300005466	Switchgrass Rhizosphere	MTIHGGGEGQRVGCRTCDVVFRDRTTGNLALVPCPVCGLAGEVISLPMPDTWPSDYTDEAGAIK*
Ga0070698_1002400771	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTPTFGDEGQRVGCRACNVVFRDRTTRSLALVPCPVCDLQGQVIGLPIPNTWPSDYAEDEETIQ*
Ga0070695_1019002952	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTIHGGGEGQRVGCRTCDVVFRDRTSGDLALVPCPVCGLAGEVISLPMPDTWPS
Ga0068861_1014281452	3300005719	Switchgrass Rhizosphere	MTIHCGGEGQRVGCRACDVVFHDRTTRDLALVPCPVCDLQSEVMSLPMPDTWPSD*
Ga0066903_1005108434	3300005764	Tropical Forest Soil	MPPMFGDEGQRVGCRACNVVFRDRTTQSLDLVACPVCDVQGAVIPLPIPDTYPSDYIEDEETLP*
Ga0066903_1005819903	3300005764	Tropical Forest Soil	MTPMFGDEGQRVGCRTCNVVFRDRTTRSLALVPCPVCDLQGAVISLPIPNTWPSDYAEDEETIQ*
Ga0066903_1008699653	3300005764	Tropical Forest Soil	MTIHDEGEGQRVGCRTCNVVFRDRTSDDLALVPCPICGLAGEVISLPIPDTWPTDYAAVQTRK*
Ga0066903_1009973074	3300005764	Tropical Forest Soil	MTPRFGDEGQRVGCRACNVVFRDRTTQSLALVPCPVCDLQGAVISLPIPNTWPRDSAEDEEMLKDLPVV*
Ga0066903_1013753772	3300005764	Tropical Forest Soil	MTPRFGDEGQRVGCRACNVVFRDRTTQSLALVSCPVCDLQGAVISLPIPNTWPSDSAEDEEMIKYPPVV*
Ga0066903_1016381562	3300005764	Tropical Forest Soil	MTIHEEGEGQRVGCRTCNVVFRDRTRDDLALVPCPVCGLAGEVISLPIPDTWPTDYPAAQTRK*
Ga0066903_1069857472	3300005764	Tropical Forest Soil	MAPKVGDKGQRVGCRACNVVFRDQSTRSLAMVPCPACGLQGEVISLPIPGTWPSDYAEAEEETIKGSVANFAQEVMKGQ*
Ga0066903_1091175311	3300005764	Tropical Forest Soil	MTIHDKGEGQRVGCRTCNVVFRDRTRDDLALVPCPVCGLAGEVISLPIPDTWPTDSAAAQTRK*
Ga0081455_102953422	3300005937	Tabebuia Heterophylla Rhizosphere	MTIHDAGEGQRVGCRTCDVVFRDRTSDDLALVPCPVCGLAGEVVSLPIPDTWPTDYAEEETIT*
Ga0081538_101024731	3300005981	Tabebuia Heterophylla Rhizosphere	MTIHNEGEGQRVGCRTCDVVFRARASADLALVPCPVCGLAGEVISLPIPDTWPTDYAEETIK*
Ga0081540_11573002	3300005983	Tabebuia Heterophylla Rhizosphere	GQRVGCRTCDVVFRDRSSDDLARVLCPVCGLAGEVISLPIPDTWPTDYAEETIK*
Ga0081539_102144522	3300005985	Tabebuia Heterophylla Rhizosphere	MPPMFGDEGQRVGCRACNVVFRDRSTRSLALVPCPVCDQQGQVISLPIPDTWPSDYVAGVEPIP*
Ga0075417_100246942	3300006049	Populus Rhizosphere	MTPNSGDKGQRVGCRACNVVFRDRTTRSLALVPCPACGLQGAVISLPIPDTWPSDYAEEEIIK*
Ga0075428_1001024366	3300006844	Populus Rhizosphere	MTSHRVDEGQRVGCRLCDVVFRDRTRGDLALVPCPVCGLTGEVISLPRPDMWPSDSADKEGALK*
Ga0075428_1002177242	3300006844	Populus Rhizosphere	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDYADEESALK*
Ga0075421_1000702225	3300006845	Populus Rhizosphere	PMTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDYAEEEGALT*
Ga0075421_1018891591	3300006845	Populus Rhizosphere	MTTNGGGEGQRVGCRACDVVFRDRTTESLALVPCPACGLQGEVMSLPIPDTWPSDYAGEEGSIK*
Ga0075430_1003789252	3300006846	Populus Rhizosphere	RTAMTPNSGDKGQRVGCRACNVVFRDRTTRSLALVPCPACGLQGAVISLPIPDTWPSDYAEEEIIK*
Ga0075431_1015722122	3300006847	Populus Rhizosphere	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDSAEEEGALK*
Ga0075431_1022404802	3300006847	Populus Rhizosphere	MTIHDGGEGQRVGCRTCDVVFRDRSRDDLALVPCPVCGLAGEVISLPIPDTWPTDYAEEETIK*
Ga0075420_1007312081	3300006853	Populus Rhizosphere	MMTNLGGKGQRVGCRACDVVFRDRTTESLALVPCPACGLQGEVMSLPIPDTWPSDYAGEEGTIK*
Ga0075425_1013480911	3300006854	Populus Rhizosphere	MTPMFGDEGQRVGCRACNVVFRDRTTQSLALVSCPVCDLQGAVIRLPIPNTWPSDSTE
Ga0075419_104361542	3300006969	Populus Rhizosphere	MTIHRGGEGQRVDCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDSAEEEGALT*
Ga0111539_102385053	3300009094	Populus Rhizosphere	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVLCPVCDVQGEVISLPMTDTWPSDSAEEEGALK*
Ga0075418_108340321	3300009100	Populus Rhizosphere	MTIHRGGEGKRVGCRACNVVFRDNTTMDLALVACPVCDVQGEVISLPTTDTWPSNYVDEEGALT*
Ga0075418_116241332	3300009100	Populus Rhizosphere	MTIHRGGEGQRVGCRACNVVFRDNTPRDLALVPCPVCDVQGEVISLPMTDTWPSDYA
Ga0075418_125623911	3300009100	Populus Rhizosphere	MPSTFGDQGQRVGCRACNVVFRDRTTENLALVACPVCNLQGQVIGLPIPDTWPTDYAEDEETIP*
Ga0111538_110385192	3300009156	Populus Rhizosphere	MTIHRGGEGQRVGCRPCEVVFHNRTTGDLALVPCPVCGLEGEVISLPRPDTWPSDYADEEGALK*
Ga0111538_110869393	3300009156	Populus Rhizosphere	GQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDSAEEEGALK*
Ga0111538_139970251	3300009156	Populus Rhizosphere	GQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDYAEEEGALT*
Ga0105248_104846952	3300009177	Switchgrass Rhizosphere	MTIHGGGEGHRVGCRTCDVVFRDRTTGNLALVPCPVCGLAGEVISLPRPDTWPSDEADEEGAIR*
Ga0105249_100690212	3300009553	Switchgrass Rhizosphere	MPTNLGGEGHRVGCRACDVVFRDRTAENLALVPCPACGLQGEVMRLPLPDTWPSNYADAEEAIP*
Ga0105249_105859332	3300009553	Switchgrass Rhizosphere	MTIHCGGEGQRVGCRACDVVFHDRTTRDLALVPCPVCDLQGEVMSLPMPDTWPSD*
Ga0105249_110082132	3300009553	Switchgrass Rhizosphere	MTTKLSGEGQRVGCRACDVVFRDRTAESLTLVPCPACGLQGEVVSLPIPDTWPSDYAGEEERIK*
Ga0126374_110840321	3300009792	Tropical Forest Soil	MTPRFGDEGQRVGCRACNVVFRDRTTQSLALVLCPVCDLQGAVISLPIPNTWPRDSAEDEEMLKDLPVV*
Ga0126308_105452262	3300010040	Serpentine Soil	MTPHVGDEGQRVGCRACDVVFRDRTTRSLAMVPCPACGLQGQVISLPIPDTWPSDYAEEAEPIK*
Ga0126312_105653232	3300010041	Serpentine Soil	MTPHVGDEGQRVGCRACDVVFRDRTTRSRALVPCPACGLQGQVISLPIPDTWPSDYAEEAEPIK*
Ga0126314_101278154	3300010042	Serpentine Soil	MTIHHRGEGQRVGCRTCDVVFRDKTCEDLAHVPCPVCGLASEVISLPMPDTWPSDYADEAGAIKETPIFSIVLCGRDGR*
Ga0126380_102880762	3300010043	Tropical Forest Soil	HLSDRSPPMTIHDAGEGQRVGCRTCNVVFRDRTSDDLTLVPCPVCGLAGEVIHLPIPATWPTDYAEETIT*
Ga0126380_109766001	3300010043	Tropical Forest Soil	MTIYEEGQGQRVGCRTCNVVFRDRTSDDLALVPCPVCGLAGEVISLPRPDTWPTDYAAAQTRK*
Ga0126380_116643041	3300010043	Tropical Forest Soil	MTIHDAGEGQRVGCRTCDVVFRDRSSDDLARVLCPVCGLAGEVISLPMPDTWPTDYAEETIK*
Ga0126384_112268872	3300010046	Tropical Forest Soil	MTTNRGGEGQRVGCRACDVVFRDRTAESLALVPCPACGLQGEVVSLPIPDTWPSDYAGEEEKVCHRC*
Ga0126382_100743082	3300010047	Tropical Forest Soil	MTPIFGDEGQRVGCRACNVVFRDRTTQSLTLVSCPVCDLQGAVISLPIPNTWPSDYVEDEEMIQSPPVL*
Ga0126382_112880462	3300010047	Tropical Forest Soil	MTTKLGGEGHRVGCRACDVVFRDRTAESLALVPCPACGLQGEVVSLPIPDTWPSDYAGEEGSINLLYLST*
Ga0126382_116706441	3300010047	Tropical Forest Soil	MPPTFRDEGQRVGCRACNVVFRDRTTENLALVACPACNLQGQVIGLPIPNTWPSDYAEDEETIP*
Ga0126382_121063662	3300010047	Tropical Forest Soil	MTIHEAGEGQRIGCRTCNVVFRDRTSDDLALVPCPVCGLAGEVISLPIPDTWPTDYAAA*
Ga0126321_14304762	3300010145	Soil	MTPHFGDEGQRVGCRACDVVFRDRTTRHLAMVPCPACGRQGEVIRLPIPDTWPSDYAEEETIK*
Ga0126370_104252592	3300010358	Tropical Forest Soil	MTPRFGDEGQRVGCRACNVVFRDRTTQSLALVSCPVCDLQGAVVSLPIPNTWPSDSAEDEEMIKYPPVV*
Ga0126370_107205561	3300010358	Tropical Forest Soil	MPIYEEGQGQRVGCRTCNVVFRDRASDDLALVPCPVCGLAGEVISLPIPDTWPTDYAEEEPIK*
Ga0126376_103386492	3300010359	Tropical Forest Soil	MTPMFGDEGQRVGCRACNVVFRDRTTQSLPLVFCPVCDLQGAVISLPIPNTWPSDAAADDEMRKSPPVV*
Ga0126372_103810422	3300010360	Tropical Forest Soil	MTIHDKGEGQRVGCRTCNVVFRDRTSDDLALVPCPVCGLAGEVISLPIPDTWPTDSAAAQTRK*
Ga0126372_105424841	3300010360	Tropical Forest Soil	MTIYEEGQGQRVGCRTCNVVFRDRASDDLALVPCPVCGLAGEVISLPRPDTWPTDYAAEETTK*
Ga0126372_106878102	3300010360	Tropical Forest Soil	MTSMFGDEGQRVGCRACNVVFRDRTTQSLALVSCPVCDLQGAVVSLPIPNTWPSDSAEDEEMIKYPPVV*
Ga0126377_109691671	3300010362	Tropical Forest Soil	MTIYEEGQGQRVGCRTCNVVFRDRASDDLALVPCPVCGLAGEVISLPIPDTWPTDYAEEETTK*
Ga0126377_112097982	3300010362	Tropical Forest Soil	MTIYDAGEGQRVGCRTCEVVFRDRASDDLARVPCPVCGLAGEVIPLPIPDTWPTD
Ga0126377_114343982	3300010362	Tropical Forest Soil	MIPMFGDEGQRVGCRACNVVFRDRTTQSLALLSCPVCDLQGAVISLPIPNTWPSDAAEDEEMIQSPPVV*
Ga0126377_120034391	3300010362	Tropical Forest Soil	MPPTFGDEGQRVGCRACNVVFRDRATQSLALVPCPVCDLQGQVIRLPLPNTWPNDYAEDEETIQ*
Ga0126377_120957791	3300010362	Tropical Forest Soil	MTIPEAGEGQRVGCRTCDVVFRDRTSADLTRVSCPVCGRAGAVIRIPRPDTWPTDSAEEETRT*
Ga0126377_129824232	3300010362	Tropical Forest Soil	MTPMFGDEGQRVGCRACNVVFRDRTTQSLALVSCPVCDLQGAVVSLPIPNTWPSDSAEDEKMIQSPPVL*
Ga0126379_114349451	3300010366	Tropical Forest Soil	MTVHDEGKGQRVGCRTCNVVFRDRTSDDLALVPCPVCGLAGEVISLPIPDTWPTDYAAAQTRK*
Ga0126379_114666071	3300010366	Tropical Forest Soil	MAPKVGDKGQRVGCRACNVVFRDQSTRSLAMVPCPACGLQGEVISLPIPNTWPSDYAEAEEETRK*
Ga0105239_109121892	3300010375	Corn Rhizosphere	MAISTSRTLPIYRGGEGQRVGCRACNVVFRDTTTSDLALALCPVCDVQGEVISLPMTDTWPSDSADEEGALK*
Ga0126383_113981252	3300010398	Tropical Forest Soil	MTIHDKGEGQRVGCRTCNVVFRDRTRDDLALVPCPVCGLAGEVISLPIPDTWPTDYPAAQTRK*
Ga0126383_120260892	3300010398	Tropical Forest Soil	MPPTFGDEGQRVGCRACNVAFRDRTTQSLALVPCPVCDLQGQVIRLPLPNTWPNDYAEDEETIQ*
Ga0137376_113762751	3300012208	Vadose Zone Soil	MTIHDEGEGQRVGCRTCNVVFRDRSSDDLALVPCPVCGLAGEVISLPIPDTWPTDYAEETIK*
Ga0150985_1193207871	3300012212	Avena Fatua Rhizosphere	ASSCVDERRTPMTIYRGGEGQRVGCRACNVVFRDTTTSDLALALCPVCDVQGEVISLPMTDTWPSDYADEEGALK*
Ga0150984_1193941242	3300012469	Avena Fatua Rhizosphere	MTSHGGGEGQRVGCRTCDVVFRDRTSGDLALVPCPVCGLAGEVISLPMPDTWPSDEADEEGAIK*
Ga0126375_102859451	3300012948	Tropical Forest Soil	MPPTCRDEGQRVGCRACNVVFRDRTTANLALVACPACNLQGQVIGLPIPNTWPSDYAEDEETIQ*
Ga0126375_104361732	3300012948	Tropical Forest Soil	MTIYEEGQGQRVGCRTCHVVFRDKASDDLALMPCPVCGLAGEVISLPIPDTWPT
Ga0126375_105966262	3300012948	Tropical Forest Soil	MTPMFGDEGQRVGCRACHVVFRDRTTQSLALVSCPVCDLQGAVIRLPIPNTWPSDAAEDEEIITSPPVV*
Ga0126375_106395972	3300012948	Tropical Forest Soil	MTPTCEDKGQRVGCRACNVVFRDRTTRSLALVPCPVCDLQGVVISLPIPHTWPNDYAEDE
Ga0126369_100822544	3300012971	Tropical Forest Soil	MTIHDKGEGQRVGCRTCNVVFRDRTRDDLALVPCPVCGLAGEVISLPIPDTWPTDYAAAQTRK*
Ga0126369_101757492	3300012971	Tropical Forest Soil	MTPRFGDEGQRVGCRACNVVFHDRTTQSLALVSCPVCDLQGAVISLPIPNTWPSDSAEDEEMIKYPPVV*
Ga0126369_120703281	3300012971	Tropical Forest Soil	MPIYEEGQGQRVGCRTCNVVFRDRASDDLALVPCPVCGLAGEVISLPIPDTWPTDYAAEETTK*
Ga0126369_134170511	3300012971	Tropical Forest Soil	MPPMFGDEGQRVGCRACNVVFRDRTTQSLALVACPVCAVQGAVIPLPIPDTYPSDYTEDEATIQ*
Ga0163162_100604953	3300013306	Switchgrass Rhizosphere	MPTNLGGEGHRVGCRACDVVFRDRTAENLALVPCPACGLQGEVMRLPLPDTWPSNYADAEGAIP*
Ga0157375_107045741	3300013308	Miscanthus Rhizosphere	MTIHCGGEGQRVGCRACDVVFHDRTTWDLALVPCPVCDLQSEVMSLPMPDTWPSD*
Ga0132258_119361282	3300015371	Arabidopsis Rhizosphere	MTIHRGGEGQRVGCRTCEVVFHDRTTGDLALVPCPVCGLEGEVISLPRPDTWPSDYADEEGALK*
Ga0207679_116958872	3300025945	Corn Rhizosphere	MTSHGGGEGQRVGCRTCDVVFRDRTSGDLALVPCPVCGLAGEVISLPMPDTWPSDEADEEGAIK
Ga0207712_102709881	3300025961	Switchgrass Rhizosphere	MTIYRGGEGQRVGCRACNVVFRDTTTSDLALALCPVCDVQGEVISLPMTDTWPSDYADEEGALK
Ga0207712_120302201	3300025961	Switchgrass Rhizosphere	MTTKLSGEGQRVGCRACDVVFRDRTAESLTLVPCPACGLQGEVVSLPIPDTWPSDYAGEEERIK
Ga0207675_1021729102	3300026118	Switchgrass Rhizosphere	MTIYRGGEGQRVGCRACNVVFRDTTTSDLALALCPVCDVQGEVISLPMTDTWPSDYTDEEGALK
Ga0209814_100118291	3300027873	Populus Rhizosphere	AMTPNSGDKGQRVGCRACNVVFRDRTTRSLALVPCPACGLQGAVISLPIPDTWPSDYAEEEIIK
Ga0209465_100392323	3300027874	Tropical Forest Soil	MTIHDEGEGQRVGCRTCNVVFRDRTSDDLALVPCPICGLAGEVISLPIPDTWPTDYAAVQTRK
Ga0209481_100819813	3300027880	Populus Rhizosphere	MTIHCGGEGQRVGCRACDVVFHDRTTRDLALVPCPVCDLQSEVMSLPMPDTWPSD
Ga0207428_102203453	3300027907	Populus Rhizosphere	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDSAEEEGDLK
Ga0207428_102718612	3300027907	Populus Rhizosphere	RVGCRACNVVFRDRTTRSLALVPCPACGLQGAVISLPIPDTWPSDYAEEEIIK
Ga0209382_100059926	3300027909	Populus Rhizosphere	MTPNSGDKGQRVGCRACNVVFRDRTTRSLALVPCPACGLQGAVISLPIPDTWPSDYAEEEIIK
Ga0209382_102101245	3300027909	Populus Rhizosphere	MTIHDEGEGQRVGCRTCNVVFRDRSRDDLALVPCPVCGLAGEVISLPIPDTWPTDYAEEETIK
Ga0247827_108765492	3300028889	Soil	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDYADEESALK
Ga0310887_111379691	3300031547	Soil	MTIHRGGEGKRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDSAEEEGALK
Ga0310890_115290701	3300032075	Soil	MTIHRGGEGQRVGCRACHVVFRDNTASDLALVPCPVCDVQGEVISLSMTDTWPSDSADEEGALK
Ga0307472_1018333612	3300032205	Hardwood Forest Soil	MTSHRGGEGQRVGCRTCDVVFRDRASGDLALIPCPVCGLEGEVISLPMPDTWPSDYVDEEGAPHSPEFS
Ga0247830_114641521	3300033551	Soil	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDSAEEEGALK
Ga0314782_107149_40_234	3300034661	Soil	MTIHRGGEGKRVGCRACNVVFRDNTTMDLALVPCPVCDVQGEVISLPTTDTWPSNYVDEEGALT
Ga0314784_103225_1_168	3300034663	Soil	QRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDSAEEEGALK
Ga0314784_150449_18_212	3300034663	Soil	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDYAEEEGALT
Ga0314787_008793_1035_1229	3300034665	Soil	MTIHRGGEGQRVGCRACNVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDYAYEEGAHT
Ga0314803_082751_327_521	3300034678	Soil	MTIHRGGEGQRVGCRACHVVFRDNTASDLALVPCPVCDVQGEVISLPMTDTWPSDSAEEEGALK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079768

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences