NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079715

Metagenome / Metatranscriptome Family F079715

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079715
Family Type Metagenome / Metatranscriptome
Number of Sequences 115
Average Sequence Length 46 residues
Representative Sequence MAAMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRAIK
Number of Associated Samples 108
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 35.45 %
% of genes near scaffold ends (potentially truncated) 26.96 %
% of genes from short scaffolds (< 2000 bps) 90.43 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Eukaryota (73.913 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine
(14.783 % of family members)
Environment Ontology (ENVO) Unclassified
(46.957 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(87.826 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.33%    β-sheet: 0.00%    Coil/Unstructured: 78.67%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF05914RIB43A 44.35
PF00141peroxidase 20.87

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 115 Family Scaffolds
COG0376Catalase (peroxidase I)Inorganic ion transport and metabolism [P] 20.87

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.91 %
UnclassifiedrootN/A26.09 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000120|SA_S2_NOR13_50mDRAFT_c1018521All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1059Open in IMG/M
3300000128|SA_S1_NOR08_45mDRAFT_c10124424All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum773Open in IMG/M
3300000930|BpDRAFT_10266832All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum989Open in IMG/M
3300001263|BBAY83_10125710All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae820Open in IMG/M
3300001354|JGI20155J14468_10111140All Organisms → cellular organisms → Eukaryota943Open in IMG/M
3300003216|JGI26079J46598_1045564All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae911Open in IMG/M
3300003345|JGI26080J50196_1041655All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum926Open in IMG/M
3300005043|Ga0071100_1075674All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae787Open in IMG/M
3300005941|Ga0070743_10030049All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1876Open in IMG/M
3300006029|Ga0075466_1042287All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1373Open in IMG/M
3300006867|Ga0075476_10355501All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae506Open in IMG/M
3300007513|Ga0105019_1053490All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum2405Open in IMG/M
3300007513|Ga0105019_1211565All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae943Open in IMG/M
3300007545|Ga0102873_1106978All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum846Open in IMG/M
3300007548|Ga0102877_1061612All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1078Open in IMG/M
3300007658|Ga0102898_1021299All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1440Open in IMG/M
3300007692|Ga0102823_1017870All Organisms → cellular organisms → Eukaryota1978Open in IMG/M
3300008052|Ga0102893_1062419All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1122Open in IMG/M
3300008740|Ga0115663_1102501Not Available788Open in IMG/M
3300008996|Ga0102831_1315034All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum517Open in IMG/M
3300009071|Ga0115566_10096724All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1905Open in IMG/M
3300009071|Ga0115566_10224108Not Available1137Open in IMG/M
3300009077|Ga0115552_1087595All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1361Open in IMG/M
3300009172|Ga0114995_10190751Not Available1139Open in IMG/M
3300009422|Ga0114998_10586978Not Available524Open in IMG/M
3300009432|Ga0115005_10473876All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae996Open in IMG/M
3300009436|Ga0115008_10276655All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1192Open in IMG/M
3300009466|Ga0126448_1013264All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum2035Open in IMG/M
3300009495|Ga0115571_1378935All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae554Open in IMG/M
3300009497|Ga0115569_10054999All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum2176Open in IMG/M
3300009526|Ga0115004_10154288All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1387Open in IMG/M
3300009538|Ga0129287_10137216All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1046Open in IMG/M
3300009543|Ga0115099_10914306Not Available1017Open in IMG/M
3300009550|Ga0115013_11253715Not Available543Open in IMG/M
3300009599|Ga0115103_1000447Not Available526Open in IMG/M
3300009599|Ga0115103_1903933All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae822Open in IMG/M
3300009608|Ga0115100_11056537All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Peniculida → Parameciidae → Paramecium → Paramecium tetraurelia991Open in IMG/M
3300009790|Ga0115012_11352668Not Available605Open in IMG/M
3300010309|Ga0102890_1042040All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae899Open in IMG/M
3300010370|Ga0129336_10136277All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1424Open in IMG/M
3300010885|Ga0133913_13126588Not Available1098Open in IMG/M
3300012524|Ga0129331_1004100All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae815Open in IMG/M
3300012952|Ga0163180_11050226Not Available656Open in IMG/M
3300012953|Ga0163179_11226090Not Available664Open in IMG/M
3300012954|Ga0163111_10500843All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1120Open in IMG/M
3300012965|Ga0129346_1241220All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum716Open in IMG/M
3300012970|Ga0129338_1076931Not Available698Open in IMG/M
3300017280|Ga0186684_114850All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae826Open in IMG/M
3300017697|Ga0180120_10057118All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1748Open in IMG/M
3300017731|Ga0181416_1167966Not Available530Open in IMG/M
3300017763|Ga0181410_1114445All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae774Open in IMG/M
3300017818|Ga0181565_10222494All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1290Open in IMG/M
3300017952|Ga0181583_10327605All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae968Open in IMG/M
3300018410|Ga0181561_10278196All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum786Open in IMG/M
3300018413|Ga0181560_10235088All Organisms → cellular organisms → Eukaryota878Open in IMG/M
3300018420|Ga0181563_10089465All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum2042Open in IMG/M
3300018420|Ga0181563_10197565All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1229Open in IMG/M
3300018599|Ga0188834_1029058All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae556Open in IMG/M
3300018628|Ga0193355_1008758All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae881Open in IMG/M
3300018846|Ga0193253_1045875All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1080Open in IMG/M
3300018968|Ga0192894_10275519Not Available564Open in IMG/M
3300018981|Ga0192968_10058994All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae1050Open in IMG/M
3300019022|Ga0192951_10258977All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae652Open in IMG/M
3300019031|Ga0193516_10111173Not Available932Open in IMG/M
3300019033|Ga0193037_10334433Not Available534Open in IMG/M
3300019036|Ga0192945_10007155All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum2006Open in IMG/M
3300019045|Ga0193336_10346123All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae672Open in IMG/M
3300019048|Ga0192981_10126937All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Peniculida → Parameciidae → Paramecium → Paramecium tetraurelia1007Open in IMG/M
3300019085|Ga0188830_1021353All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae534Open in IMG/M
3300019095|Ga0188866_1013970Not Available822Open in IMG/M
3300019149|Ga0188870_10135085Not Available569Open in IMG/M
3300019150|Ga0194244_10014635All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae955Open in IMG/M
3300019200|Ga0180036_1067814All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae815Open in IMG/M
3300021325|Ga0210301_1207987All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae808Open in IMG/M
3300021336|Ga0210307_1075718All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae799Open in IMG/M
3300021336|Ga0210307_1146264All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1904Open in IMG/M
3300021348|Ga0206695_1504072Not Available826Open in IMG/M
3300021350|Ga0206692_1923627Not Available868Open in IMG/M
3300021353|Ga0206693_1384596Not Available708Open in IMG/M
3300021365|Ga0206123_10397718Not Available567Open in IMG/M
3300021378|Ga0213861_10130188All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1455Open in IMG/M
3300021378|Ga0213861_10421667All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae651Open in IMG/M
3300021379|Ga0213864_10305758All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae807Open in IMG/M
3300021872|Ga0063132_118404Not Available660Open in IMG/M
3300021927|Ga0063103_1015606All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae805Open in IMG/M
3300021962|Ga0222713_10138311All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1696Open in IMG/M
3300021962|Ga0222713_10459115All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae770Open in IMG/M
3300023087|Ga0255774_10402196All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum616Open in IMG/M
3300024239|Ga0247724_1045017All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae651Open in IMG/M
3300025508|Ga0208148_1019980All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1912Open in IMG/M
3300025699|Ga0209715_1069956All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1404Open in IMG/M
3300025806|Ga0208545_1138850All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae592Open in IMG/M
3300025897|Ga0209425_10056608All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum2563Open in IMG/M
3300027241|Ga0208805_1036200All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum916Open in IMG/M
3300027525|Ga0208437_1160316All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae502Open in IMG/M
3300027571|Ga0208897_1105061All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum717Open in IMG/M
3300027751|Ga0208304_10253441All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum624Open in IMG/M
3300027753|Ga0208305_10178976All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum769Open in IMG/M
3300027833|Ga0209092_10337232All Organisms → cellular organisms → Eukaryota805Open in IMG/M
3300027849|Ga0209712_10321188All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae876Open in IMG/M
(restricted) 3300027997|Ga0255057_10122377All Organisms → cellular organisms → Eukaryota1261Open in IMG/M
3300028282|Ga0256413_1249897All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae630Open in IMG/M
3300028575|Ga0304731_10276742Not Available500Open in IMG/M
3300030859|Ga0073963_11479801All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae795Open in IMG/M
3300031522|Ga0307388_10395486Not Available894Open in IMG/M
3300031569|Ga0307489_10305740All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum1030Open in IMG/M
3300031729|Ga0307391_10348194All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae814Open in IMG/M
3300031742|Ga0307395_10390754All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae604Open in IMG/M
3300031851|Ga0315320_10977134All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae514Open in IMG/M
3300034073|Ga0310130_0245809All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum563Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine14.78%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine13.91%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine13.04%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous6.09%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh6.09%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine6.09%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater4.35%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake3.48%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.48%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.61%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water2.61%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.61%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.74%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine1.74%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine1.74%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.74%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.74%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.87%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.87%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.87%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.87%
Marine Subseafloor AquiferEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine Subseafloor Aquifer0.87%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.87%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.87%
SeawaterEnvironmental → Aquatic → Marine → Gulf → Unclassified → Seawater0.87%
Beach Aquifer PorewaterEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Beach Aquifer Porewater0.87%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond0.87%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.87%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.87%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.87%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.87%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000120Marine microbial communities from chronically polluted sediments in Adventfjord, Norway - Svalbard Archipelago station 2 sample NOR 13_50mEnvironmentalOpen in IMG/M
3300000128Marine microbial communities from chronically polluted sediments in Adventfjord, Norway : sample - Svalbard Archipelago station 1 sample NOR 08_45mEnvironmentalOpen in IMG/M
3300000930Marine microbial communities from the coastal margin of the Columbia River, USA - 33 PSU, 16mEnvironmentalOpen in IMG/M
3300001263Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY83Host-AssociatedOpen in IMG/M
3300001354Pelagic Microbial community sample from North Sea - COGITO 998_met_05EnvironmentalOpen in IMG/M
3300003216Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_59LU_5_DNAEnvironmentalOpen in IMG/M
3300003345Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_90LU_22_DNAEnvironmentalOpen in IMG/M
3300005043Mid-Atlantic Ridge North Pond Expedition - Sample 1382AEnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300007513Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate bEnvironmentalOpen in IMG/M
3300007545Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3EnvironmentalOpen in IMG/M
3300007548Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3EnvironmentalOpen in IMG/M
3300007557Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715EnvironmentalOpen in IMG/M
3300007658Estuarine microbial communities from the Columbia River estuary - metaG 1555A-3EnvironmentalOpen in IMG/M
3300007692Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.743EnvironmentalOpen in IMG/M
3300008052Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02EnvironmentalOpen in IMG/M
3300008740Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300009002Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.573EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009422Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009466Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 2m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009497Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009538Microbial community of beach aquifer porewater from Cape Shores, Lewes, Delaware, USA - H-2WEnvironmentalOpen in IMG/M
3300009543Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009550Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 MetagenomeEnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009608Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_2Apr14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300010309Estuarine microbial communities from the Columbia River estuary - metaG 1552A-3EnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300012524Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012952Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 MetagenomeEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300012954Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaGEnvironmentalOpen in IMG/M
3300012965Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012970Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017280Metatranscriptome of coastal eukaryotic communities from Ligurian Sea in autoclaved artificial seawater, 19 C, 33 psu salinity and 638 ?mol photons light - Strombidium inclinatum S3 (MMETSP0208)Host-AssociatedOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017731Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16EnvironmentalOpen in IMG/M
3300017735Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018410Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018413Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018599Metatranscriptome of marine microbial communities from Baltic Sea - GS675_3p0_dTEnvironmentalOpen in IMG/M
3300018628Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_111 - TARA_N000001820 (ERX1782125-ERR1711885)EnvironmentalOpen in IMG/M
3300018846Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_092 - TARA_N000001299 (ERX1789404-ERR1719503)EnvironmentalOpen in IMG/M
3300018968Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_068 - TARA_N000000713 (ERX1782205-ERR1712096)EnvironmentalOpen in IMG/M
3300018981Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001440 (ERX1782157-ERR1712238)EnvironmentalOpen in IMG/M
3300019022Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001390 (ERX1782474-ERR1712194)EnvironmentalOpen in IMG/M
3300019031Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_142 - TARA_N000003104 (ERX1782386-ERR1711939)EnvironmentalOpen in IMG/M
3300019033Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_040 - TARA_N000000067 (ERX1782334-ERR1712080)EnvironmentalOpen in IMG/M
3300019036Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001382 (ERX1782404-ERR1712086)EnvironmentalOpen in IMG/M
3300019045Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_110 - TARA_N000001752 (ERX1782348-ERR1712224)EnvironmentalOpen in IMG/M
3300019048Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001030 (ERX1782209-ERR1712166)EnvironmentalOpen in IMG/M
3300019085Metatranscriptome of marine microbial communities from Baltic Sea - GS670_3p0_dTEnvironmentalOpen in IMG/M
3300019095Metatranscriptome of marine microbial communities from Baltic Sea - GS694_3p0_dTEnvironmentalOpen in IMG/M
3300019149Metatranscriptome of marine microbial communities from Baltic Sea - GS695_3p0_dTEnvironmentalOpen in IMG/M
3300019150Eukaryotic communities of water from different depths collected during the Tara Oceans expedition - TARA_N000000616 (ERX1782105-ERR1711908)EnvironmentalOpen in IMG/M
3300019200Estuarine microbial communities from the Columbia River estuary - R.1175 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021325Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1033 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021336Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R1073 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021348Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021350Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021353Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021379Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247EnvironmentalOpen in IMG/M
3300021872Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S5 C27 B21 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300021927Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-122M (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300023087Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaGEnvironmentalOpen in IMG/M
3300024239Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-EEnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025699Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)EnvironmentalOpen in IMG/M
3300025806Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025897Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)EnvironmentalOpen in IMG/M
3300027241Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027525Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.705 (SPAdes)EnvironmentalOpen in IMG/M
3300027571Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697 (SPAdes)EnvironmentalOpen in IMG/M
3300027751Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)EnvironmentalOpen in IMG/M
3300027753Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027849Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027997 (restricted)Seawater microbial communities from Amundsen Gulf, Northwest Territories, Canada - Cases_109_6EnvironmentalOpen in IMG/M
3300028282Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_77 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028575Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030859Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_R_5 metaT (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031522Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R2 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031569Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2EnvironmentalOpen in IMG/M
3300031729Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-4.R2 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031742Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-5.R3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031851Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SA_S2_NOR13_50mDRAFT_101852123300000120MarineMESAHRDANLTEKDAKDARWPNMYGDLNPNPDVMKDMVAGADPRTIK*
SA_S1_NOR08_45mDRAFT_1012442423300000128MarineMEGAHRDANLSEKVAKDARWPNMYGDLNPIPDVKKDMVGGADPRPIK*
BpDRAFT_1026683243300000930Freshwater And MarineSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPIK*
BBAY83_1012571033300001263Macroalgal SurfaceMMAAQRDHNLTEKQAKDARWPNMYGDQDPIKEVTKDMVSGADKRPIK*
JGI20155J14468_1011114023300001354Pelagic MarineMVKEHSEAAEAERVAKAARWPNMYGDLNPQPDVQKDMVAGADVRPIK*NPNK*
JGI26079J46598_104556433300003216MarineMEASHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPI
JGI26080J50196_104165523300003345MarineMEASHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPIK*
Ga0071100_107567433300005043Marine Subseafloor AquiferMNNAHRDQHVDDRQAKDERWPNMYGDLNPQPDVTKDMVAGADVRDIK*
Ga0070743_1003004923300005941EstuarineMAAMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRAIK*
Ga0075466_104228743300006029AqueousMAAQHRDQHVEDKEAKDARWPNMYGDLNPIPDVTRDMVANADPRPIK*
Ga0075476_1035550113300006867AqueousMMEAAHRDANLSEKQAKDARWPNMYGDLNPIPDVKKDMVAGANPRPIV*
Ga0105019_105349033300007513MarineMANATKDANLEEKEAKDARWPNMYGDLNPDPNVAKDMVGGADPRPIK*
Ga0105019_121156513300007513MarineVDKAAKDARWPNMYGDLNPIPDVTKDMVGGADVRNIK*
Ga0102873_110697813300007545EstuarineMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRAIK*
Ga0102877_106161223300007548EstuarineMAAMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRGIK*
Ga0102821_107298713300007557EstuarineMAAMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDM
Ga0102898_102129923300007658EstuarineMAAMHRDAHIVDKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRAIK*
Ga0102823_101787023300007692EstuarineMAAMHRDAHLVDKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRGIK*
Ga0102893_106241933300008052EstuarineHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPIK*
Ga0115663_110250143300008740MarineMIANQRDTNKMERDAKDARWPNMYGDLDALPDVKRDMVAESNVRPIK*
Ga0102831_131503423300008996EstuarineAAMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRGIK*
Ga0102810_125042113300009002EstuarineMRADQRDQHLEDKDAKNARWPNMYGDENPLPEVT*
Ga0115566_1009672423300009071Pelagic MarineMEGTHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPIK*
Ga0115566_1022410813300009071Pelagic MarineMMAAHRDQHLADKQAKDARWPNMYGDLNPLPDVKKDMVQGASDRPVNPNVY*
Ga0115552_108759523300009077Pelagic MarineMVKEHSEAAEAERVAKAARWPNMYGDLNPQPDVQKDMVAGADVRPIK*
Ga0114995_1019075113300009172MarineMMAAHRDQHLADKTAKDARWPNMYGDLNPLPDVKKDMVQGASDRPVNPNVY*
Ga0114998_1058697823300009422MarineMMAAHRDQHLADKTAKDARWPNMYGDLNPLPDVKKDMV
Ga0115005_1047387623300009432MarineMSEHRDQHLSDKVAKDERWPNMYGDLDKLPEVKKDMVGGANPRPIV*
Ga0115008_1027665523300009436MarineMLGAQRDHNLEEKNAKDARWPNMYGDQNPLPEVAKDMVTGADPRPI*
Ga0115556_122825313300009437Pelagic MarineMVKEHSEAAEAERVAKAARWPNMYGDLNPQPDVQKDM
Ga0126448_101326413300009466Meromictic PondMMEAHRNQHLVDKVAKDDRWPNMYGDLNPLPPVTKDMVAGANPRPIK*
Ga0115571_137893513300009495Pelagic MarineLAEKEKQLMQEHRDQHLVDKAAKDARWPNMYGDLNPLPDVKKDMVANAQPRPIV*
Ga0115569_1005499923300009497Pelagic MarineMIGAHRDQHLVDKDAKDARWPNMYGDLNPLPDVQKDMVAEAQARPIV*
Ga0115004_1015428833300009526MarineMVKEHSEAAEAERVAKAARWPNMYGDLNPQPDVQQDMVAGADVRPIK*
Ga0129287_1013721623300009538Beach Aquifer PorewaterMLAAMRDHNLQEKEDKEKRWPNMYGDLNPLPDVQKNMVMEADPRPVK*
Ga0115099_1091430613300009543MarineMMAAHRDQHLADKTAKDARWPNMYGDLNPLPDVKKDMVTGASDRPVNPNVY*
Ga0115013_1125371513300009550MarineMGEHRDANLMERDAKNARWPNMYGDLNPLPDVTKDMVGGANPRPIK*
Ga0115103_100044713300009599MarineMSAMHRDQHLVDKVAKEERWPNMYGDLNPLPDVQRDMVAGANPRPIK*
Ga0115103_190393313300009599MarineMSAMHRDQHLVDKVAKEERWPNMYGDLNPIPDVTKNMVEGAAVRPI
Ga0115100_1105653713300009608MarineMAADHRDQALSDKVEKDARWPNMYGDLNPLPNVQKDMVAGADVRPIK*
Ga0115012_1135266813300009790MarineMAEHRDANLAEKDAKNARWPNMYGDLNPLPDVQKDMVGTAVSRPIQ*
Ga0102890_104204023300010309EstuarineMEASHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGAD
Ga0129336_1013627723300010370Freshwater To Marine Saline GradientMAAMHRDAHLVEKVAKDSRWPNMYGDLNPQPDVTKDMVAGANPRGIK*
Ga0133913_1312658813300010885Freshwater LakeMTENHRDHALADKTAKDARWPNMYGDLDPLPDVKKDMVAGANPRTIV*
Ga0129331_100410023300012524AqueousLAEKEKKLMEEHRDQHLVDKAAKDARWPNMYGDLNPLPDVKKDMVANAQVRPIV*
Ga0163180_1105022613300012952SeawaterMAEHRDANLAEKDAKNARWPNMYGDLNPLPDVSKDMVAEANVRPIK*
Ga0163179_1122609013300012953SeawaterMAEHRDANITEKQAKDARWPNMYGDLNPLPDVKKDMVAEADPRPIK*
Ga0163111_1050084313300012954Surface SeawaterMIDAHRDQHLVDKEAKDARWPNMYGDLNPLPEVQKDMVAQSNPRPIV*
Ga0129346_124122023300012965AqueousMAASTRDHNLGEKVEKDARWPNMYGDLDALPNVEKDMVAGAQPREIK*
Ga0129338_107693113300012970AqueousMANAHRVANLKEREEKDARWPNMYGDLDPLPDVKKDMVAGANPRPIK*
Ga0186684_11485013300017280Host-AssociatedMQGSTRDANLDEKVKKDERWPNMYGDLNPIPDVTKDMVAGADPRAIK
Ga0180120_1005711843300017697Freshwater To Marine Saline GradientMVKEHSEAAEAERVAKAARWPNMYGDLNPQPDVQKDMVAGADVRPIK
Ga0181416_116796623300017731SeawaterMMAAHRDQHLADKQAKDARWPNMYGDLNPLPDVKKDMVANASDRPINPNVY
Ga0181431_107303213300017735SeawaterMAEHRDANLAEKDAKNARWPNMYGDLNPLPGVEKDMVA
Ga0181410_111444513300017763SeawaterMAASTRDANLTEKVAKDDRWPNMYGDLNPIPDVQKDMVQGANVRPIK
Ga0181565_1022249413300017818Salt MarshMEASHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGANPRPIK
Ga0181583_1032760533300017952Salt MarshMVDAHRDANLQEKQEKDARWPNMYGDLDPLPDVKKDMVAGADPRPIK
Ga0181561_1027819633300018410Salt MarshAAQHRDQHLVDKEAKDARWPNMYGDLNPIPDVTRDMVANADPRPIK
Ga0181560_1023508823300018413Salt MarshMAAQHRDQHLVDKEAKDARWPNMYGDLNPIPDVTRDMVANADPRPIK
Ga0181563_1008946533300018420Salt MarshMEAHRDQHLSDKVAKDERWPNMYGDLNPLPNVTKDMVGGANPRPIK
Ga0181563_1019756523300018420Salt MarshMEGTHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGANPRPIK
Ga0188834_102905823300018599Freshwater LakeMEGTHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGANPR
Ga0193355_100875813300018628MarineMAEAHRDAHLVEKEAKHARWPNMYGDLNPLPDVEKNMVAGALPREIK
Ga0193253_104587533300018846MarineMIKEHSDQAQLDKTAKDERWPNMYGDLNPQPDVQKDMVAGADVRPIK
Ga0192894_1027551913300018968MarineMAEHRDHNKMERDAKDARWPNMYGDLNPLPDVKKDMVGEASVRPIK
Ga0192968_1005899423300018981MarineMIKNHSDQAELDKVAKDERWPNMYGDLNPQPDVTQDMVAGADTRPVK
Ga0192951_1025897713300019022MarineMSEHRDQHLGDKVAKDERWPNMYGDLDKLPDVKKDMVAGS
Ga0193516_1011117323300019031MarineMAASTRDANLDEKVAKDERWPNMYGDLNPDPNVTKDMVGGADPRPIK
Ga0193037_1033443313300019033MarineMMEAHRDQHLVDKVEKDERWPNMYGDLDPQPDVKKDMVAGADVRPIKXDCNLQNLKM
Ga0192945_1000715523300019036MarineMTEHRDQHVVDAEAKNARWPNMYGDQNPQPDVAKDMVAGANTRAI
Ga0193336_1034612333300019045MarineMAEAHRDAHLLEKEAKDARWPNMYGDLNPLPDVEKNMVAGALPREIKXNSLD
Ga0192981_1012693733300019048MarineMSEHRDQHLGDKVAKDERWPNMYGDLDKLPTVEKDMVAGS
Ga0188830_102135313300019085Freshwater LakeMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANP
Ga0188866_101397013300019095Freshwater LakeMAAHRDQHLADKQAKDARWPNMYGDLNPLPDVKKDMVQGASDRPVNPNVYXARI
Ga0188870_1013508523300019149Freshwater LakeMAEHRDANLAEKDAKNARWPNMYGDLNALPGVEKDMVSTAVSR
Ga0194244_1001463513300019150MarineMIDAHRDQHLVDKQAKDARWPNMYGDLNPLPEVQKDMVGESKARPIV
Ga0180036_106781433300019200EstuarineMEASHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPIKXIYXXLNV
Ga0210301_120798723300021325EstuarineMEASHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRP
Ga0210307_107571813300021336EstuarineMMEAAHRDANLSEKQAKDARWPNMYGDLNPIPDVKKDMVAGANPRPIV
Ga0210307_114626423300021336EstuarineMEASHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPIK
Ga0206695_150407223300021348SeawaterMGEHRDANLAEKDAKNARWPNMYGDLNALPGVQKDMVSTAVSRPIVXRLQDDXLA
Ga0206692_192362723300021350SeawaterMGEHRDANLAEKDAKNARWPNMYGDLNALPGVQKDMVSTAVSRPIV
Ga0206693_138459623300021353SeawaterMGEHRDANLAEKDAKNARWPNMYGDLNALPGVQKDMVSTAVSRPIVXRLQDDXL
Ga0206123_1039771813300021365SeawaterMMAAHRDQHLADKQAKDARWPNMYGDLNPLPDVKKDMVQGASDRPVNPNVY
Ga0213861_1013018823300021378SeawaterMEGTHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPIK
Ga0213861_1042166713300021378SeawaterMEEHRDQHLVDKAAKDARWPNMYGDLNPLPDVKKDMVANAQVRPIVXEKESLFSE
Ga0213864_1030575823300021379SeawaterMTEAHRDQHLLDKTAKDERWPNMYGDLNPLPEVQKDMVAGAVSRPIV
Ga0063132_11840413300021872MarineMAAHRDQHLADKQAKDARWPNMYGDLNPLPDVKKDMVQG
Ga0063103_101560633300021927MarineMSEHRDQHLSDKVAKDERWPNMYGDLDXLPEVKKDMVGGANPRPIV
Ga0222717_1008176323300021957Estuarine WaterMAEHRDANLAEKDAKNARWPNMYGDLNALPNVEKDMVSTAVSRPIQXIYWIKLLLNRIWT
Ga0222713_1013831133300021962Estuarine WaterMANAHRVANLKEREEKDARWPNMYGDLDPLPDVKKDMVAGANPRPIK
Ga0222713_1045911523300021962Estuarine WaterMAAMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRGIK
Ga0255774_1040219623300023087Salt MarshNLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGANPRPIK
Ga0247724_104501733300024239Deep Subsurface SedimentMHRDAHLVDKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRAIK
Ga0208148_101998033300025508AqueousMAAQHRDQHVEDKEAKDARWPNMYGDLNPIPDVTRDMVANADPRPIK
Ga0209715_106995623300025699Pelagic MarineKEKEMIGAHRDQHLVDKDAKDARWPNMYGDLNPLPDVQKDMVAEAQARPIV
Ga0208545_113885033300025806AqueousMAAQHRDQHVEDKEAKDARWPNMYGDLNPIPDVTRDMVANADP
Ga0209425_1005660833300025897Pelagic MarineMVKEHSEAAEAERVAKAARWPNMYGDLNPQPDVQKDMVAGADVRPIKXNPNK
Ga0208805_103620013300027241EstuarineHRDANLSEKVAKDARWPNMYGDLDPIPDVKKDMVAGADPRPIK
Ga0208437_116031623300027525EstuarineMAAMHRDAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRAIK
Ga0208897_110506123300027571EstuarineAHLVEKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRAIK
Ga0208304_1025344113300027751EstuarineLVDKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRGIK
Ga0208305_1017897623300027753EstuarineMAAMHRDAHLVDKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRGIK
Ga0209092_1033723223300027833MarineMLGAQRDHNLEEKNAKDARWPNMYGDQNPLPEVAKDMVTGADPRPI
Ga0209712_1032118833300027849MarineMSEHRDQHLSDKVAKDERWPNMYGDLDKLPEVKKDMVGGANP
(restricted) Ga0255057_1012237723300027997SeawaterMEATHNDANLQEKEAKDARWPNMYGDLNPIPDVKKDMVAGADPRPIK
Ga0256413_124989713300028282SeawaterMIKEHSDQAQLDKVAKDERWPNMYGDLNPQPDVQKDMVAGADVRPIK
Ga0304731_1027674213300028575MarineMAGSTKDANLAEKVAKDERWPNMYGDLNPDPNVQKDMVGGADP
Ga0073963_1147980113300030859MarineMIEAQRDTNLVEKEAKDARWPNMYGDLNPLPQVEKNMVAGAEPREIK
Ga0307388_1039548613300031522MarineMGEHRDANLAEKDAKNSRWPNMYGDLNALPDVQKDMVATATMRPIV
Ga0307489_1030574023300031569Sackhole BrineMEEVHKSANTLEQTQKDARWPNMYGDLDPQPDVKKDMVGGANPRPIKXSKITFINT
Ga0307391_1034819433300031729MarineMTEHRDQHLADKVAKDERWPNMYGDLDKLPEVGKDMVAGSNPRPIV
Ga0307395_1039075413300031742MarineMSEHRDQHLQDKTAKDERWPNMYGDLDKLPDVEKDMVAGSQPRPIV
Ga0315320_1097713423300031851SeawaterMTKEHSDQAQVDKVAKDERWPNMYGDLNPQPDVGKDMVAGANVREIKXRNVEVKXNE
Ga0310130_0245809_367_5103300034073Fracking WaterMAAMHRDAHLVDKVAKDARWPNMYGDLNPQPDVTKDMVAGANPRAIK

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.