Metagenome / Metatranscriptome Family F079484

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079484
Family Type	Metagenome / Metatranscriptome
Number of Sequences	115
Average Sequence Length	49 residues
Representative Sequence	QIISTKEHHHCPRRELTRTEMILFWALRIYLVFMVGVVVYQIWTGAR
Number of Associated Samples	96
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.26 %
% of genes from short scaffolds (< 2000 bps)	94.78 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.043 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (15.652 % of family members)
Environment Ontology (ENVO)	Unclassified (37.391 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.696 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.67% β-sheet: 0.00% Coil/Unstructured: 61.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF00330	Aconitase	35.65
PF00903	Glyoxalase	9.57
PF00459	Inositol_P	4.35
PF02517	Rce1-like	3.48
PF13493	DUF4118	1.74
PF00694	Aconitase_C	1.74
PF13442	Cytochrome_CBB3	1.74
PF00550	PP-binding	0.87
PF00072	Response_reg	0.87
PF00873	ACR_tran	0.87
PF13637	Ank_4	0.87
PF01177	Asp_Glu_race	0.87
PF13432	TPR_16	0.87
PF01522	Polysacc_deac_1	0.87
PF13620	CarboxypepD_reg	0.87
PF07731	Cu-oxidase_2	0.87
PF00809	Pterin_bind	0.87
PF07676	PD40	0.87
PF00069	Pkinase	0.87
PF01266	DAO	0.87
PF07927	HicA_toxin	0.87
PF07963	N_methyl	0.87
PF02542	YgbB	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.48
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	3.48
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	3.48
COG0245	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	Lipid transport and metabolism [I]	0.87
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.87
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.87
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.04 %
Unclassified	root	N/A	46.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.04 %
Unclassified	root	N/A	46.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.04 %
Unclassified	root	N/A	46.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.96 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.09 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.09 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.09 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.09 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.09 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.22 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.74 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.09 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.74 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.74 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.09 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.74 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.74 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001166\|JGI12694J13545_1004730	All Organisms → cellular organisms → Bacteria → Acidobacteria	1705	Open in IMG/M
3300003218\|JGI26339J46600_10000402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14890	Open in IMG/M
3300004091\|Ga0062387_101538309	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300004092\|Ga0062389_101125328	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300004152\|Ga0062386_100189315	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300004152\|Ga0062386_100509125	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300004152\|Ga0062386_101440251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	574	Open in IMG/M
3300005437\|Ga0070710_10816064	Not Available	667	Open in IMG/M
3300005533\|Ga0070734_10611272	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300005538\|Ga0070731_10838261	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300005541\|Ga0070733_11152307	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005541\|Ga0070733_11214450	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300005591\|Ga0070761_10776700	Not Available	602	Open in IMG/M
3300005602\|Ga0070762_10068948	Not Available	1988	Open in IMG/M
3300005712\|Ga0070764_10493821	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300006059\|Ga0075017_100081318	All Organisms → cellular organisms → Bacteria	2230	Open in IMG/M
3300006086\|Ga0075019_10506799	Not Available	749	Open in IMG/M
3300006162\|Ga0075030_100558439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	909	Open in IMG/M
3300006162\|Ga0075030_101622853	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300009525\|Ga0116220_10394369	Not Available	618	Open in IMG/M
3300009624\|Ga0116105_1093135	Not Available	745	Open in IMG/M
3300009624\|Ga0116105_1239540	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009635\|Ga0116117_1035035	Not Available	1243	Open in IMG/M
3300009643\|Ga0116110_1118105	Not Available	891	Open in IMG/M
3300009643\|Ga0116110_1252392	Not Available	565	Open in IMG/M
3300009645\|Ga0116106_1098722	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300009645\|Ga0116106_1298622	Not Available	513	Open in IMG/M
3300009824\|Ga0116219_10538560	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300010339\|Ga0074046_10838090	Not Available	537	Open in IMG/M
3300010341\|Ga0074045_10145620	Not Available	1612	Open in IMG/M
3300010341\|Ga0074045_10265544	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300010361\|Ga0126378_10634310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1182	Open in IMG/M
3300010361\|Ga0126378_10925276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300010366\|Ga0126379_11208331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300010379\|Ga0136449_104296397	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300014158\|Ga0181521_10470133	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300014501\|Ga0182024_12720186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	528	Open in IMG/M
3300014654\|Ga0181525_10199577	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300014657\|Ga0181522_10833737	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300016705\|Ga0181507_1063920	Not Available	655	Open in IMG/M
3300017822\|Ga0187802_10338282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300017943\|Ga0187819_10105106	Not Available	1686	Open in IMG/M
3300017943\|Ga0187819_10703046	Not Available	570	Open in IMG/M
3300017943\|Ga0187819_10798946	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300017946\|Ga0187879_10004916	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8845	Open in IMG/M
3300017946\|Ga0187879_10572372	Not Available	627	Open in IMG/M
3300017948\|Ga0187847_10088664	Not Available	1714	Open in IMG/M
3300017970\|Ga0187783_10824649	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300017995\|Ga0187816_10383465	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300017996\|Ga0187891_1212498	Not Available	655	Open in IMG/M
3300017998\|Ga0187870_1176167	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300018001\|Ga0187815_10345417	Not Available	632	Open in IMG/M
3300018003\|Ga0187876_1156323	Not Available	793	Open in IMG/M
3300018013\|Ga0187873_1172103	Not Available	819	Open in IMG/M
3300018015\|Ga0187866_1100175	Not Available	1197	Open in IMG/M
3300018025\|Ga0187885_10275930	Not Available	764	Open in IMG/M
3300018035\|Ga0187875_10461265	Not Available	675	Open in IMG/M
3300018035\|Ga0187875_10539443	Not Available	617	Open in IMG/M
3300018037\|Ga0187883_10163656	Not Available	1144	Open in IMG/M
3300018042\|Ga0187871_10783587	Not Available	532	Open in IMG/M
3300018046\|Ga0187851_10267401	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300018047\|Ga0187859_10269579	Not Available	917	Open in IMG/M
3300018057\|Ga0187858_10608084	Not Available	659	Open in IMG/M
3300018057\|Ga0187858_10818469	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300018062\|Ga0187784_10224258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1531	Open in IMG/M
3300018085\|Ga0187772_10427758	Not Available	925	Open in IMG/M
3300018086\|Ga0187769_10839643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300018086\|Ga0187769_11194150	Not Available	576	Open in IMG/M
3300018090\|Ga0187770_11165008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300018090\|Ga0187770_11473780	Not Available	554	Open in IMG/M
3300019787\|Ga0182031_1159745	Not Available	1020	Open in IMG/M
3300019888\|Ga0193751_1097185	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300020150\|Ga0187768_1108412	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300020579\|Ga0210407_11300445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	543	Open in IMG/M
3300020580\|Ga0210403_11394892	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300020581\|Ga0210399_10835779	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300020581\|Ga0210399_11175188	Not Available	610	Open in IMG/M
3300021171\|Ga0210405_10777444	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300021181\|Ga0210388_11229666	Not Available	634	Open in IMG/M
3300021401\|Ga0210393_10144849	All Organisms → cellular organisms → Bacteria → Acidobacteria	1907	Open in IMG/M
3300021403\|Ga0210397_10656786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300021474\|Ga0210390_10781588	Not Available	791	Open in IMG/M
3300022530\|Ga0242658_1172749	Not Available	572	Open in IMG/M
3300025412\|Ga0208194_1047004	Not Available	669	Open in IMG/M
3300027568\|Ga0208042_1110948	Not Available	692	Open in IMG/M
3300027591\|Ga0209733_1013720	All Organisms → cellular organisms → Bacteria	2160	Open in IMG/M
3300027729\|Ga0209248_10043036	Not Available	1394	Open in IMG/M
3300027825\|Ga0209039_10008758	All Organisms → cellular organisms → Bacteria	6192	Open in IMG/M
3300027829\|Ga0209773_10141831	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300027857\|Ga0209166_10203034	Not Available	1065	Open in IMG/M
3300027879\|Ga0209169_10164167	Not Available	1158	Open in IMG/M
3300027896\|Ga0209777_10221470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1506	Open in IMG/M
3300027898\|Ga0209067_10408650	Not Available	761	Open in IMG/M
3300027908\|Ga0209006_10885883	Not Available	718	Open in IMG/M
3300028798\|Ga0302222_10105695	Not Available	1120	Open in IMG/M
3300029910\|Ga0311369_10475261	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300030053\|Ga0302177_10455194	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300030053\|Ga0302177_10648598	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300030057\|Ga0302176_10410903	Not Available	546	Open in IMG/M
3300030503\|Ga0311370_10333075	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300030503\|Ga0311370_11512831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	701	Open in IMG/M
3300030520\|Ga0311372_10735460	Not Available	1367	Open in IMG/M
3300030618\|Ga0311354_11800577	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300030659\|Ga0316363_10215328	Not Available	794	Open in IMG/M
3300031233\|Ga0302307_10337864	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300031708\|Ga0310686_116119065	Not Available	880	Open in IMG/M
3300031718\|Ga0307474_10790673	Not Available	750	Open in IMG/M
3300031753\|Ga0307477_11059357	Not Available	530	Open in IMG/M
3300031788\|Ga0302319_11291342	Not Available	666	Open in IMG/M
3300032770\|Ga0335085_11688880	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300032783\|Ga0335079_10405842	All Organisms → cellular organisms → Bacteria → Acidobacteria	1468	Open in IMG/M
3300032805\|Ga0335078_12239439	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300032898\|Ga0335072_10360271	Not Available	1586	Open in IMG/M
3300033405\|Ga0326727_10086791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4284	Open in IMG/M
3300034091\|Ga0326724_0281823	Not Available	935	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.52%
Aquatic	Environmental → Aquatic	43.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.22%
Freshwater	Environmental → Aquatic → Freshwater	39.13%
Peat	Environmental → Terrestrial → Peat	11.30%
Sediment	Environmental → Aquatic → Sediment	4.35%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	38.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.30%
Loam	Environmental → Terrestrial → Soil → Loam	6.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.35%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.87%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	26.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.74%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.87%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	15.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.70%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.22%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.35%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.48%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.61%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.74%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.87%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.87%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016705	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12694J13545_10047301	3300001166	Forest Soil	HHCPRRRLTGMEMVLFWALRFYLVFMFGVVIYQVWTSVR*
JGI26339J46600_100004026	3300003218	Bog Forest Soil	MTSLEPDQLISTKEHHHCPRRRLTRTEMLLFWALRVYLVFMLGVVLYQIWTNMR*
Ga0062387_1015383092	3300004091	Bog Forest Soil	LEPDQLISTKEHHHCPRRRLTRTEMVLFWALRIYLVLMVGVVVYQIWTSVR*
Ga0062389_1011253281	3300004092	Bog Forest Soil	LEPDQIVSTKEHHHCPRRRLTRTEMILFWALRIYLVFMVGVVVYQIWTGVR*
Ga0062386_1001893153	3300004152	Bog Forest Soil	HHCPRRKLTRAETILFWALRVYLVLMLGVVVYQILTGAH*
Ga0062386_1005091253	3300004152	Bog Forest Soil	IIFTKEHHHCPRRQLTRTETVLFWALRIYLVFMVGVVVYQIWTGVR*
Ga0062386_1014402512	3300004152	Bog Forest Soil	IIFTKEHHHCPRRQLTRTEMVLFWALRIYLVFMVGVVVYQIWTGVR*
Ga0070710_108160641	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LISTKQKHHCPRRQLTRKEMILFWALRFYLVFMFGVVIYQVSAAVR*
Ga0070734_106112721	3300005533	Surface Soil	YPRRKLKRSEIILFWGLRLYLLFMMGVVCYQVWTATR*
Ga0070731_108382612	3300005538	Surface Soil	SLVAALEPDQLISAKTKHHYPRRQFTTAETFLFWLLRIYLVFMFGVVIYQAWTGAK*
Ga0070733_111523073	3300005541	Surface Soil	IVASLEPDQLIGAKAKLHCPRRQLTGTEVLLFWMLRVYLVFMFGVVLYQVWTGAR*
Ga0070733_112144501	3300005541	Surface Soil	DLASVVASLEPDQLISTKQKHHCPRRMLTRKEMILFWALRFYLVFMFGVVIYQAWTSVR*
Ga0070761_107767002	3300005591	Soil	EKHHFPRRRLTRTETVLFWGLRIYLMFMVGVVMYQIWTGAR*
Ga0070762_100689481	3300005602	Soil	VLHHCPRRNLTRAETILFWALRIYLVFMLGVVVYQILTGAH*
Ga0070764_104938212	3300005712	Soil	ASVVAALEPDQLISAKEQNRIARRHLTKSEQFLFWFLRIYLVFMLFVVIYQVWTGAR*
Ga0075017_1000813183	3300006059	Watersheds	ELTSVMTALEPDQIVSTKDHHHCPRRRLTRTEMLLFWALRIYLVFMVGVVVYQIWTGVR*
Ga0075019_105067992	3300006086	Watersheds	PDQLISAKQKHHCPRRSLTATEKIVFWALRIYLVLMFAVVLYQVFTTVK*
Ga0075030_1005584391	3300006162	Watersheds	KERHHCPRRQLTQTEKALFWALRIYLLFMVGVVAYQIWTTVR*
Ga0075030_1016228531	3300006162	Watersheds	EFTAVITALEPDQLISAKEHHHCPRRELTGTEMVLFWGLRVYLVFMVGVVVYQIWTGVR*
Ga0116220_103943691	3300009525	Peatlands Soil	TKEHHHCPRRRLTRKEMLLFWALRIYLVFMVGVVAYQIWTGVR*
Ga0116105_10931351	3300009624	Peatland	RKLTRAETILFWALRVYLVFMLGVVVYQILTGAH*
Ga0116105_12395402	3300009624	Peatland	LEPDQIISTKEHHHCPRRQLTRIEMVVFWGLRIYLVFMVGVVVYQIWTGVR*
Ga0116117_10350351	3300009635	Peatland	PDQIISTKEHHHCPRRQLTRTEMIVFWGLRIYLVFMVGVVVYQIWTTVR*
Ga0116110_11181051	3300009643	Peatland	ALEPDQIVFTKEHHHCPRRRLTRNEMVLFWALRIYLVFMVGVVVYQIWTGVR*
Ga0116110_12523921	3300009643	Peatland	EHHHCPRRRLTRKEMLLFWALRIYLVFMVGVVVYQIWTGVR*
Ga0116106_10987221	3300009645	Peatland	TKEHHHCPRRRLTRTEKILFWGLRIYLVFMVGVVIYQIWTGVR*
Ga0116106_12986221	3300009645	Peatland	TKEHHHCPRRRLTRTEKILFWGLRIYLVFMVGVVIYQIWTGMR*
Ga0116219_105385602	3300009824	Peatlands Soil	EDSVAVVASLEPDQLISAKAKHHCPRRRLTGTEMVLFWALRLYLVFMCGVVLYQVWTGAR
Ga0074046_108380901	3300010339	Bog Forest Soil	PDQIISTKDHHHCPRRQLTRTEMILFWGLRIYLLFMVGVVVYQIWTGVR*
Ga0074045_101456201	3300010341	Bog Forest Soil	IFAKEHHHCPRRQLTRTEMILFWALRIYLVFMVGVVVYQIWTGVR*
Ga0074045_102655442	3300010341	Bog Forest Soil	STKEHHHCLRRQLTRTEMILFWALRIYLVFMFGVVVYQIWTGVR*
Ga0126378_106343101	3300010361	Tropical Forest Soil	PDQLIAAKEKYHVARRHLTPTEKILFWALRIYLLFMCGVVLYQVFTAAH*
Ga0126378_109252762	3300010361	Tropical Forest Soil	LISAKQQQHCPRRSLTALEKTLFWLLRIYLIFMFGVVIYQISHNLR*
Ga0126379_112083311	3300010366	Tropical Forest Soil	HCPRRSLTPIEKTLFWLLRIYLVFMFGVVIYQIWHNVR*
Ga0136449_1042963971	3300010379	Peatlands Soil	LEPDQLISTKEHHHCPRRRLTRNEMVLFWALRTYLVFMVGVVVYQIWTGVR*
Ga0181521_104701332	3300014158	Bog	ASLEPDQLISAKEKHHCPRRRLTRAEMILFWTLRLYLVFMFGVVVYQVLTGAR*
Ga0182024_127201862	3300014501	Permafrost	STKQKHHCPRRRLTGMEMVLFWALRFYLVFMFGVVIYQVWSSVR*
Ga0181525_101995771	3300014654	Bog	DQLISAKVLHHCPRRNLTRAETILFWALRVYLVFMLGVVVYQILTGAH*
Ga0181522_108337371	3300014657	Bog	VAVVVTSLEPDQLTSAKVLHHCPRRNLTRAETILFWALRVYLVFMLGVVVYQILTGAH*
Ga0181507_10639201	3300016705	Peatland	HHCPRRRLTRTEMLLFWALRIYLVFMVGVVVYQIWTGVR
Ga0187802_103382822	3300017822	Freshwater Sediment	VVASLEPDQLISSKAKHHCPRRQLTRNEMILFWALRFYLVFMFGVVIYQVWIGTR
Ga0187819_101051061	3300017943	Freshwater Sediment	ASLEPDQLISTKAKHHCPRRELTTTEMILFWALRFYLVFMFGVVIYQVWTGTH
Ga0187819_107030461	3300017943	Freshwater Sediment	SLEPDQLISAKEQHHCPRRRLTRTEMLLFWALRIYLVFMVGVVLYQIWTSVR
Ga0187819_107989461	3300017943	Freshwater Sediment	ASLEPDQLISTKAKHHCPRRELTTTEMILFWALRFYLVFMFGVVIYQVWTGTR
Ga0187879_100049161	3300017946	Peatland	PDQIISTKEHHHCPRRQLTRTEMIVFWGLRIYLVFMVGVVVYQIWTTVR
Ga0187879_105723721	3300017946	Peatland	ELSSVMTALEPDQIISTKEHHHCPRRQLTRIEMILFWALRIYLVFMVGVVVYQILTAVR
Ga0187847_100886641	3300017948	Peatland	REDLASVMTALEPDQIIFAKEHHHCPRRQLTRTEMILFWALRIYLVFMVGVVVYQIWTGV
Ga0187783_108246492	3300017970	Tropical Peatland	VAALEPDQLISAKQKYHCPRRQLTKTEMILFWLLRAYLLFMFAVVIYQAWTALH
Ga0187816_103834651	3300017995	Freshwater Sediment	HHCPRRRLTRTEMLLFWALRVYLVFMLGVVLYQIWTNMR
Ga0187891_12124981	3300017996	Peatland	ITSVMTALEPDQIIFTKEHHHCPRRRLTRNEMILFWALRIYLVFMVGVVVYQIWTGVR
Ga0187870_11761671	3300017998	Peatland	PDQIVFTKEHHHCPRRRLTWTEKVLFWGLRIYLVFMVGVVVYQIWTGVR
Ga0187815_103454171	3300018001	Freshwater Sediment	EFTAVITALEPDQIISTKEHHHCPRRRLTRNEMLLFWGLRIYLVFMVGVVVYQIWTGVR
Ga0187876_11563231	3300018003	Peatland	HHHCPRRRLTRTEKILFWGLRIYLVFMVGVVIYQIWTGMR
Ga0187873_11721031	3300018013	Peatland	QIIFTKEHHHCPRRRLTRNEMILFWALRIYLVFMVGVVVYQIWTGVR
Ga0187866_11001752	3300018015	Peatland	ELTAVMTALEPDQIIFTKEHHHCPRRRLTRTEMLLFWALRIYLVFMVGVVVYQIWTSVR
Ga0187885_102759302	3300018025	Peatland	REELTAVMTALEPDQLISTKEHHHCPRRQLTRGEMILFWALRIYLVLMVGVVVYQIWTSI
Ga0187875_104612651	3300018035	Peatland	DQIIFAKEHHHCPRRELTRTEMILFWALRIYLVFMVGVVVYQIWTGVR
Ga0187875_105394432	3300018035	Peatland	AVMTSLEPDQLISTKEHHHCPRRRLTRTEMLLFWALRIYLVFMVGVVVYQIWTSVR
Ga0187883_101636563	3300018037	Peatland	HHHCPRRQLTRTEMILFWALRIYLVFMVGVVVYQIWTGVR
Ga0187871_107835872	3300018042	Peatland	HHCPRRRLTRKEMLLFWALRIYLVFMVGVVIYQIWTGVR
Ga0187851_102674011	3300018046	Peatland	VMTALEPDQIISTKEHHHCPRRQLTRIEMVVFWGLRIYLVFMVGVVVYQIWTGAR
Ga0187859_102695792	3300018047	Peatland	DELTAVMTSLEPDQLISTKEHHHCPRRRLTRTEMLLFWALRIYLVFMVGVVVYQIWTSVR
Ga0187858_106080841	3300018057	Peatland	RRQLTGKEMILFWALRFYLVFMFGVVIYQVLTSVR
Ga0187858_108184692	3300018057	Peatland	VASLEPDQLISAKVLHHCPRRKLTRAETILFWALRIYLVFMLGVVVYQILTGTH
Ga0187784_102242581	3300018062	Tropical Peatland	HCPRRNLTGTEMILFWLLRFYLVFMFGVVIYQVWTGAR
Ga0187772_104277581	3300018085	Tropical Peatland	ALEPDQLISAKEKYHCPRRKLTNTEMILFWLLRVYLLFMFGVVIHQAWTALH
Ga0187769_108396432	3300018086	Tropical Peatland	LASVVAALEPDQLISAKETHHCPRRNLTVVEKFLFWFLRIYLVFMFGVVVYQIWTGTR
Ga0187769_111941502	3300018086	Tropical Peatland	QIISTKEHHHCPRRRLTRTEMILFWVLRIYLVFMVGVVVYQIWTGVR
Ga0187770_111650081	3300018090	Tropical Peatland	LEPDQVISEKRLHHCPRRRLTASEKFLFWFLRVYLIFMFGVVIYQVWTGAR
Ga0187770_114737801	3300018090	Tropical Peatland	AVMTALEPDQLISTKEHHHCARRRLTRKEMLLFWGLRIYLVFMIGVVVYQIWTGVR
Ga0182031_11597451	3300019787	Bog	ISTKEHHHCPRQQLTRTEMIVFWGLRIYLVFMVGVVVYQIWTTVR
Ga0193751_10971851	3300019888	Soil	QLISAKEKHHCPRRGLTRKEMILFWVLRFYLVFMFAIVIYQVWTGVR
Ga0187768_11084122	3300020150	Tropical Peatland	SEALPSVVASLEPDQLISAKEKHHCPRRQLTGTEKFLFWALRIYLVFMFGVVLYQVWTGA
Ga0210407_113004452	3300020579	Soil	DLASVVASLEPDQLISAKQKHHCPRRRLTGMEMVLFWALRFYLVFMFGVVIYQVWTSVR
Ga0210403_113948921	3300020580	Soil	HCPRRQLTRTEMILFWALRFYLVFMFGVVIYQIWTSVR
Ga0210399_108357791	3300020581	Soil	AAVVASLEPDQLISAKVLHHCPRRNLTRPETILFWALRIYLVFMLGVVVYQIWTGAH
Ga0210399_111751881	3300020581	Soil	HCPRRQLTRTEMILFWALRLYLVFMFGVVIYQVWTGAH
Ga0210405_107774441	3300021171	Soil	PRRQLTRTEMTLFWALRFYLVFMFGVVIYQIWTSVR
Ga0210388_112296662	3300021181	Soil	TSAKVLHHCPRRNLTRAETILFWALRIYLVFMLGVVVYQILTGAH
Ga0210393_101448492	3300021401	Soil	KEKHHCPRRQLTRTEKILFWALRFYLVFMFGIVIYQILTGAR
Ga0210397_106567862	3300021403	Soil	LISAKAKHHCPRRQLTAMEMALFWALRFYLVFMFGVVIYQIWTGTR
Ga0210390_107815881	3300021474	Soil	QLISTKEKHHCPRRQLTRTEKILFWALRFYLVFMFGIVLYQILTGAR
Ga0242658_11727491	3300022530	Soil	RRQLTRTEMTLFWALRFYLVFMFGVVIYQIWTSVR
Ga0208194_10470041	3300025412	Peatland	RRQLTRIEMILFWALRIYLVFMVGVVVYQILTAVR
Ga0208042_11109482	3300027568	Peatlands Soil	LISTKEHHHCPRRNLTRAEMILFWALRIYLVFMVGVVVYQIWTGVR
Ga0209733_10137201	3300027591	Forest Soil	EFVAVMTALEPDQLISTKDHHHCPRRQLTRSEMLLFWALRIYLLFMVGVVIYQIWTSVR
Ga0209248_100430362	3300027729	Bog Forest Soil	TKEHHHCPRRQLTRAEMVLFWGLRIYLVFMVGVVVYQIWTGVR
Ga0209039_100087584	3300027825	Bog Forest Soil	MTSLEPDQLISTKEHHHCPRRRLTRTEMLLFWALRVYLVFMLGVVLYQIWTNMR
Ga0209773_101418311	3300027829	Bog Forest Soil	VMTALEPDQLISTKEHHHCPRRQLTRTEMILFWALRIYLVFMVGVVVYQIWTGVR
Ga0209166_102030343	3300027857	Surface Soil	DLASVVASLEPDQLISTKEKHHCPRRQLTPTEMILFWALRFYLVFMFGVVIYQVWTSVR
Ga0209169_101641671	3300027879	Soil	TSVKVLHHCPRRNLTRAETILFWALRLYLVFMLGVVVYQILTGAH
Ga0209777_102214701	3300027896	Freshwater Lake Sediment	ISTKEHHHCPRRQLTRTEMALFWALRIYLVFMVGVVVYQIWTSVR
Ga0209067_104086502	3300027898	Watersheds	ISAKQKHHCPRRSLTATEKILFWALRIYLVLMFAVVLYQVFTTVK
Ga0209006_108858831	3300027908	Forest Soil	KARSHCSRRQLTRTEMLLFWALRLYLIFTLGVVIYQIWTVAR
Ga0302222_101056951	3300028798	Palsa	VASLEPDQLTSAKVLHHCPRRNLTRAETILFWALRVYLVFMLGVVVYQIWTGAH
Ga0311369_104752612	3300029910	Palsa	ASLEPDQIISTKEKHHCPRRKLTRMEVIIFWSLRAYLIFMFGVVLYQILSGVR
Ga0302177_104551942	3300030053	Palsa	VASVITALEPDQLIAAKEKHHLPRRRLTRTEIVLFWGLRIYLMFMVGVVVYQIWTGAR
Ga0302177_106485981	3300030053	Palsa	PEDSAAVVASLEPDQLTSAKVLHHCPRRNLTRAETILFWALRIYLVFMLGVVVYQILTGA
Ga0302176_104109032	3300030057	Palsa	RRPLTRGEMFLFWALRIYLLFTLGVVVYQIWTVAR
Ga0311370_103330752	3300030503	Palsa	DQIISTKERHHCPRRRLTRTEMILFWALRIYLVFMVGVVVYQIWTIVR
Ga0311370_115128312	3300030503	Palsa	PDQLISEKEKHHCPRRQLTGTEMIIFWALRFYLVFMFGVVIYQILTSPR
Ga0311372_107354601	3300030520	Palsa	AVVASLEPDQLTSAKVLHHCPRRNLTRAETILFWALRVYLVFMLGVVVYQIWTGAH
Ga0311354_118005772	3300030618	Palsa	RASVVASLEPDQLISEKEKHHCPRRQLTGTEMIIFWALRFYLVFMFGVVIYQILTSPR
Ga0316363_102153282	3300030659	Peatlands Soil	CPRRNLTRAEMILFWALRIYLVFMVGVVVYQIWTGVR
Ga0302307_103378641	3300031233	Palsa	AAVVASLEPDQIISTKEKHHCPRRKLTRMEVIIFWSLRAYLIFMFGVVLYQILSGVR
Ga0310686_1161190651	3300031708	Soil	ELTSVMTALEPDQIISAKERHHCPRRRLTQTEMIVFWALRIYLVFMVGVVVYQIWTGVR
Ga0307474_107906732	3300031718	Hardwood Forest Soil	CPRRQLTRTEKILFWALRFYLVFMFGIVLYQILTGAR
Ga0307477_110593572	3300031753	Hardwood Forest Soil	QKHHCPRRQLTRKEMILFWALRFYLVFMFGVVIYQVSTAVR
Ga0302319_112913422	3300031788	Bog	QIISTKEHHHCPRRELTRTEMILFWALRIYLVFMVGVVVYQIWTGAR
Ga0335085_116888802	3300032770	Soil	HFARRKLRPWEILLFWALRIYLLFMLGIVCYQIWTTVR
Ga0335079_104058421	3300032783	Soil	QLIAAKERHHCPRRELTATEKALFWALRIYLVFMFGVVIYQVWAGAR
Ga0335078_122394391	3300032805	Soil	VASLEPDQLIAAKEKYHVPRRDLTSTEKFLFWVLRIYLVFMFGVVIYQIWSGSH
Ga0335072_103602714	3300032898	Soil	VASLEPDQLISEKEKHHCPRRHLTRTEMILFWALRLYLVFMFGVVIYQVWTGVR
Ga0326727_100867911	3300033405	Peat Soil	EKEKHHCSRRQLTRAEMILFWALRLYLVFMFGVVIYQILTGAR
Ga0326724_0281823_776_934	3300034091	Peat Soil	ELEPDQLISTKEHHHCPRRRLTRTEMLLFWALRIYLVFMVGVVVYQIWTSVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079484

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences