Metagenome Family F079444

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079444
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	52 residues
Representative Sequence	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEH
Number of Associated Samples	71
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.60 %
% of genes near scaffold ends (potentially truncated)	91.30 %
% of genes from short scaffolds (< 2000 bps)	90.43 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.783 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.478 % of family members)
Environment Ontology (ENVO)	Unclassified (78.261 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.174 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.92% β-sheet: 0.00% Coil/Unstructured: 73.08%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF01258	zf-dskA_traR	11.30
PF02469	Fasciclin	9.57
PF13186	SPASM	6.09
PF00589	Phage_integrase	1.74
PF04055	Radical_SAM	1.74
PF13493	DUF4118	1.74
PF00072	Response_reg	0.87
PF00486	Trans_reg_C	0.87
PF07730	HisKA_3	0.87
PF04392	ABC_sub_bind	0.87
PF07715	Plug	0.87
PF01523	PmbA_TldD	0.87
PF00144	Beta-lactamase	0.87
PF13419	HAD_2	0.87
PF01042	Ribonuc_L-PSP	0.87
PF14602	Hexapep_2	0.87
PF00561	Abhydrolase_1	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	11.30
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	9.57
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.87
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.87
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.87
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.87
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.87
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.87
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.87
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.87
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.87
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
All Organisms	root	All Organisms	45.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
cellular organisms	root	All Organisms → cellular organisms	45.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.57 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.22 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.61 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.61 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.61 %
Burkholderiales bacterium 12-64-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 12-64-5	1.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.61 %
Burkholderiales bacterium 12-64-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 12-64-5	1.74 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.61 %
Burkholderiales bacterium 12-64-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 12-64-5	1.74 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.87 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100457421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1917	Open in IMG/M
3300005332\|Ga0066388_102360817	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005332\|Ga0066388_106540988	Not Available	587	Open in IMG/M
3300005764\|Ga0066903_100397422	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300005764\|Ga0066903_105026733	Not Available	701	Open in IMG/M
3300005764\|Ga0066903_108947628	Not Available	507	Open in IMG/M
3300010048\|Ga0126373_11495102	Not Available	741	Open in IMG/M
3300010048\|Ga0126373_12675274	Not Available	557	Open in IMG/M
3300010048\|Ga0126373_12827467	Not Available	542	Open in IMG/M
3300010358\|Ga0126370_11560450	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300010361\|Ga0126378_11344784	Not Available	808	Open in IMG/M
3300010361\|Ga0126378_11789201	Not Available	699	Open in IMG/M
3300010361\|Ga0126378_13304912	Not Available	512	Open in IMG/M
3300012677\|Ga0153928_1030771	Not Available	1137	Open in IMG/M
3300012971\|Ga0126369_10512353	Not Available	1259	Open in IMG/M
3300012971\|Ga0126369_12779605	Not Available	573	Open in IMG/M
3300016270\|Ga0182036_10806974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 12-64-5	765	Open in IMG/M
3300016294\|Ga0182041_11904443	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300016294\|Ga0182041_12182249	Not Available	517	Open in IMG/M
3300016319\|Ga0182033_10108804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2056	Open in IMG/M
3300016319\|Ga0182033_10478169	All Organisms → cellular organisms → Bacteria → Proteobacteria	1067	Open in IMG/M
3300016319\|Ga0182033_10498154	Not Available	1046	Open in IMG/M
3300016341\|Ga0182035_10535519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1004	Open in IMG/M
3300016341\|Ga0182035_11574667	Not Available	592	Open in IMG/M
3300016357\|Ga0182032_10798554	Not Available	797	Open in IMG/M
3300016357\|Ga0182032_11554003	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300016371\|Ga0182034_10370645	Not Available	1167	Open in IMG/M
3300016371\|Ga0182034_11966293	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300016387\|Ga0182040_11463715	Not Available	579	Open in IMG/M
3300016404\|Ga0182037_10458317	Not Available	1061	Open in IMG/M
3300016404\|Ga0182037_11610144	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300016422\|Ga0182039_10012076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	5051	Open in IMG/M
3300016422\|Ga0182039_10448455	Not Available	1105	Open in IMG/M
3300016422\|Ga0182039_10511541	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300017822\|Ga0187802_10330172	Not Available	597	Open in IMG/M
3300017959\|Ga0187779_10175310	Not Available	1332	Open in IMG/M
3300021560\|Ga0126371_10672167	Not Available	1184	Open in IMG/M
3300021560\|Ga0126371_13154047	Not Available	558	Open in IMG/M
3300025916\|Ga0207663_10631521	Not Available	844	Open in IMG/M
3300025929\|Ga0207664_10701308	Not Available	910	Open in IMG/M
3300027070\|Ga0208365_1014813	Not Available	981	Open in IMG/M
3300031128\|Ga0170823_11004663	Not Available	848	Open in IMG/M
3300031543\|Ga0318516_10741530	Not Available	556	Open in IMG/M
3300031545\|Ga0318541_10018356	All Organisms → cellular organisms → Bacteria	3309	Open in IMG/M
3300031545\|Ga0318541_10051614	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300031545\|Ga0318541_10520828	Not Available	665	Open in IMG/M
3300031561\|Ga0318528_10160773	Not Available	1198	Open in IMG/M
3300031564\|Ga0318573_10175100	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300031573\|Ga0310915_10590909	Not Available	787	Open in IMG/M
3300031573\|Ga0310915_10700509	Not Available	715	Open in IMG/M
3300031573\|Ga0310915_11148263	Not Available	538	Open in IMG/M
3300031573\|Ga0310915_11151913	Not Available	537	Open in IMG/M
3300031573\|Ga0310915_11296280	Not Available	502	Open in IMG/M
3300031640\|Ga0318555_10418848	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300031679\|Ga0318561_10125031	Not Available	1369	Open in IMG/M
3300031679\|Ga0318561_10803887	All Organisms → cellular organisms → Bacteria → Proteobacteria	517	Open in IMG/M
3300031681\|Ga0318572_10912232	Not Available	522	Open in IMG/M
3300031719\|Ga0306917_10715383	Not Available	787	Open in IMG/M
3300031724\|Ga0318500_10096395	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300031744\|Ga0306918_10509584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	942	Open in IMG/M
3300031744\|Ga0306918_11260272	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031747\|Ga0318502_10334966	Not Available	894	Open in IMG/M
3300031763\|Ga0318537_10289824	Not Available	606	Open in IMG/M
3300031771\|Ga0318546_11312098	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031780\|Ga0318508_1162293	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300031781\|Ga0318547_10563459	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300031792\|Ga0318529_10472583	Not Available	583	Open in IMG/M
3300031793\|Ga0318548_10236130	Not Available	898	Open in IMG/M
3300031794\|Ga0318503_10088629	Not Available	976	Open in IMG/M
3300031805\|Ga0318497_10659738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300031819\|Ga0318568_10259029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1078	Open in IMG/M
3300031819\|Ga0318568_10385125	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300031879\|Ga0306919_11027150	Not Available	630	Open in IMG/M
3300031880\|Ga0318544_10209766	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300031890\|Ga0306925_10047488	All Organisms → cellular organisms → Bacteria → Proteobacteria	4467	Open in IMG/M
3300031890\|Ga0306925_11363947	Not Available	701	Open in IMG/M
3300031890\|Ga0306925_11509737	Not Available	657	Open in IMG/M
3300031896\|Ga0318551_10303044	Not Available	899	Open in IMG/M
3300031910\|Ga0306923_10155564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2610	Open in IMG/M
3300031910\|Ga0306923_10172537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2469	Open in IMG/M
3300031910\|Ga0306923_11242962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium 12-64-5	793	Open in IMG/M
3300031912\|Ga0306921_11272236	Not Available	815	Open in IMG/M
3300031912\|Ga0306921_11725873	Not Available	676	Open in IMG/M
3300031912\|Ga0306921_11841983	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300031942\|Ga0310916_10142101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1973	Open in IMG/M
3300031942\|Ga0310916_10365355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300031947\|Ga0310909_11508164	Not Available	535	Open in IMG/M
3300031954\|Ga0306926_10860816	Not Available	1088	Open in IMG/M
3300031954\|Ga0306926_11643262	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300031954\|Ga0306926_11741960	Not Available	709	Open in IMG/M
3300031954\|Ga0306926_11790596	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300031959\|Ga0318530_10054442	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300031981\|Ga0318531_10556953	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032001\|Ga0306922_11283490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300032001\|Ga0306922_11733421	Not Available	617	Open in IMG/M
3300032010\|Ga0318569_10569462	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300032035\|Ga0310911_10865914	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300032039\|Ga0318559_10079580	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300032041\|Ga0318549_10329242	Not Available	688	Open in IMG/M
3300032044\|Ga0318558_10633775	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300032052\|Ga0318506_10499739	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300032054\|Ga0318570_10360532	Not Available	662	Open in IMG/M
3300032060\|Ga0318505_10489668	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300032067\|Ga0318524_10508534	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032076\|Ga0306924_10330192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1749	Open in IMG/M
3300032076\|Ga0306924_11396444	Not Available	747	Open in IMG/M
3300032090\|Ga0318518_10653034	Not Available	536	Open in IMG/M
3300032091\|Ga0318577_10591469	Not Available	527	Open in IMG/M
3300032261\|Ga0306920_101264320	Not Available	1063	Open in IMG/M
3300033289\|Ga0310914_10110596	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300033289\|Ga0310914_10116709	Not Available	2317	Open in IMG/M
3300033289\|Ga0310914_10642780	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300033289\|Ga0310914_11153512	Not Available	676	Open in IMG/M
3300033289\|Ga0310914_11767397	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.13%
Host-Associated	Host-Associated	0.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.26%
Aquatic	Environmental → Aquatic	0.87%
Fungi	Host-Associated → Fungi	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.26%
Freshwater	Environmental → Aquatic → Freshwater	0.87%
Mycelium	Host-Associated → Fungi → Mycelium	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.70%
Loam	Environmental → Terrestrial → Soil → Loam	7.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.87%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.87%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.22%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.74%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.87%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.87%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1004574211	3300005332	Tropical Forest Soil	MADPKTGGICMFITVLAIICLNLAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPL
Ga0066388_1023608171	3300005332	Tropical Forest Soil	MFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA*
Ga0066388_1065409881	3300005332	Tropical Forest Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEH
Ga0066903_1003974223	3300005764	Tropical Forest Soil	MFITVLAIICLNVAVAGTCMNEPVVNSNHEQLTMGGCLGLLGFESGSYSFPA*
Ga0066903_1050267332	3300005764	Tropical Forest Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMG
Ga0066903_1089476282	3300005764	Tropical Forest Soil	MFITVLAIICFNAAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKDFWEHHPLYHTWKFK
Ga0126373_114951022	3300010048	Tropical Forest Soil	MYITVLAIICLNLTVPRTCMTEPVVNSNQEQLTMGGCLGLLG
Ga0126373_126752741	3300010048	Tropical Forest Soil	MFITVLAIICLNLTVSGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYNSW
Ga0126373_128274671	3300010048	Tropical Forest Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGG
Ga0126370_115604502	3300010358	Tropical Forest Soil	MFITLLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFES
Ga0126378_113447842	3300010361	Tropical Forest Soil	MFITVLAIICLNLAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYH
Ga0126378_117892011	3300010361	Tropical Forest Soil	MFITVLAIICLNVAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHH
Ga0126378_133049121	3300010361	Tropical Forest Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFE
Ga0153928_10307712	3300012677	Attine Ant Fungus Gardens	MFITVLAIICLNLAAPGTCMNEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKG*
Ga0126369_105123532	3300012971	Tropical Forest Soil	MFITVLAIICLNLAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFK
Ga0126369_127796051	3300012971	Tropical Forest Soil	MFITLLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWERHP
Ga0182036_108069742	3300016270	Soil	MFITVLAIICLNLAVPGTCMTESVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFK
Ga0182041_119044431	3300016294	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAK
Ga0182041_121822491	3300016294	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCL
Ga0182033_101088041	3300016319	Soil	MFITVLAIVCLNIAVPGTCLTEPVVNSNQEQLTMG
Ga0182033_104781691	3300016319	Soil	MFITVLAIICLNVAVPGTCLTEPVVNSNQEQLTMGGCLG
Ga0182033_104981541	3300016319	Soil	MFITVLAIICLNLAVPGTCMTESVVNSNQEQLTMGGCLGLLGFE
Ga0182035_105355193	3300016341	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYH
Ga0182035_115746672	3300016341	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWERHPLYHTW
Ga0182032_107985543	3300016357	Soil	MFITVLAIICLNLAAPGTCMTEPVVNSDQEQLTMGGCLGLLGFESAKEFWEHHPLYH
Ga0182032_115540032	3300016357	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHS
Ga0182034_103706454	3300016371	Soil	MFITVLAIICLNLAIPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHP
Ga0182034_119662932	3300016371	Soil	MFITVLAIICLNVAITGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0182040_114637151	3300016387	Soil	MFITVLAIICLNVAVPGTCLTEPVVDSNQEQLSMGGCLGLLGFESAREFWEHHPLYHTWK
Ga0182037_104583171	3300016404	Soil	MFITVLAIICLNLTVSGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPL
Ga0182037_116101442	3300016404	Soil	MFITVLAIICLNLAVPGTCMTESVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPL
Ga0182039_100120761	3300016422	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEH
Ga0182039_104484553	3300016422	Soil	MFITVLAIVCLNIAVPGTCLTEPVVNSNQEQLTMGGCLGVLGFESAKEFWERHPLYHTWK
Ga0182039_105115411	3300016422	Soil	HHHDLSTHAGGTCMFITVLAIICLNVAITGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0187802_103301721	3300017822	Freshwater Sediment	VLVTVCLNLAVPGTCLTEPVVNSNQEQVTMGGCLGLLGFESAKEFW
Ga0187779_101753102	3300017959	Tropical Peatland	MFITVLAIICLNLAVPGTCVKEPVVNSNQEQLTMGGCLGLLGFESAKEFWEQHPLYHTWKFKLGLPVRQSRSA
Ga0187766_101296673	3300018058	Tropical Peatland	MFITVLVTVCIDVAVPGTCVTMPVVNSNQDQLTMGSCLGVVGLESAKEFWEQHPLYHNWQ
Ga0126371_106721673	3300021560	Tropical Forest Soil	MFITVLAIICLNVAVAGTCMNEPVVNSNHEQLTMGGCLGLLGFESGSYSFPA
Ga0126371_131540471	3300021560	Tropical Forest Soil	MFITVLAIICLNLAAPGTCMNEPVVNSNQEQLTMGGCLGLLGFESAKE
Ga0207663_106315211	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MFITVLAIICLNSAVPGTCLTEPVVNSNQEQLTMGGCLGLL
Ga0207664_107013083	3300025929	Agricultural Soil	MFITVLAIICLNSAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKG
Ga0208365_10148132	3300027070	Forest Soil	MFITVLAIICLNVAVPRTCLTEPVVNSNQEQLTMGGCL
Ga0170823_110046632	3300031128	Forest Soil	MFITVLVTVCLNLAVPGTCMTERVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKG
Ga0318516_107415302	3300031543	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYH
Ga0318541_100183562	3300031545	Soil	MFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0318541_100516144	3300031545	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHP
Ga0318541_105208281	3300031545	Soil	MFITVLAIICLNVAVPGTCLTEPVVNSNQEQLTMGGCLGVLGFESAKEFWERHP
Ga0318528_101607731	3300031561	Soil	MFITVLAIICLNVAITGTCLTEPVVDSNQEQLTIGGCL
Ga0318573_101751002	3300031564	Soil	SHHHDLSTHAEGTCMFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0310915_105909091	3300031573	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHH
Ga0310915_107005091	3300031573	Soil	MFITVLAIICLNVAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKE
Ga0310915_111482631	3300031573	Soil	MFITVLAIICLNLTVSGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKE
Ga0310915_111519131	3300031573	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKG
Ga0310915_112962801	3300031573	Soil	MFITVLAIICLNLAVPGTCLTEPVVNSNQEQLTMGGCLG
Ga0318555_104188482	3300031640	Soil	FITVLAIICLNVAITGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0318561_101250311	3300031679	Soil	MFITVLAIICLNIAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYH
Ga0318561_108038872	3300031679	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWE
Ga0318572_109122321	3300031681	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLY
Ga0306917_107153831	3300031719	Soil	MFITVIAIICLNLAVPGTCLTEPVVNSSQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWK
Ga0318500_100963954	3300031724	Soil	DLSTHAGGTCMFITVLAIICLNVAITGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0306918_105095841	3300031744	Soil	MFITVLAIVCLNIAVPGTCLTEPVVNSNQEQPTMGGCLG
Ga0306918_112602721	3300031744	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHP
Ga0318502_103349661	3300031747	Soil	MFITVLAIICLNLAIPGTCMTEPVVNSNQEQLTMGGCLGLLGF
Ga0318537_102898242	3300031763	Soil	MFITVLAIICLNLTVSGTCMTEPVVNSNQEQLTMGGCLG
Ga0318546_113120981	3300031771	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLL
Ga0318508_11622932	3300031780	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTW
Ga0318547_105634593	3300031781	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPL
Ga0318529_104725831	3300031792	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWK
Ga0318548_102361301	3300031793	Soil	MFITVLAIICLNLTVSGTCMTEPVVNSNQEQLTMGGCLELLGFESAKEFWEHHPL
Ga0318503_100886291	3300031794	Soil	MFITVLAIICLNLTVSGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHTWKFKG
Ga0318497_106597381	3300031805	Soil	MFITVLAIICLNVAITGTCLTEPVVNSNQEQLTIGGCLG
Ga0318568_102590292	3300031819	Soil	MFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCL
Ga0318568_103851252	3300031819	Soil	DLSTHAGGTCMFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0306919_110271502	3300031879	Soil	MFITVIAIICLNLAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWERHPLYHTWKFK
Ga0318544_102097661	3300031880	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLL
Ga0306925_100474888	3300031890	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSSQEQLTMGGCLGLLGFESAKEFWE
Ga0306925_113639471	3300031890	Soil	MFITVLAIICLNVAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEH
Ga0306925_115097371	3300031890	Soil	MFITVIAIICLNLAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPL
Ga0318551_103030442	3300031896	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLG
Ga0306923_101555645	3300031910	Soil	GTCMFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0306923_101725374	3300031910	Soil	MFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLG
Ga0306923_112429622	3300031910	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFKG
Ga0306921_112722361	3300031912	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTLGGCLGLLGFESAKEFWEHHP
Ga0306921_117258731	3300031912	Soil	MFITVIAIICLSLAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWERH
Ga0306921_118419832	3300031912	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKE
Ga0310916_101421011	3300031942	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSSQEQLTMGGCLGLLGFESAKEFWEH
Ga0310916_103653551	3300031942	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGL
Ga0310909_115081641	3300031947	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTLGGCLGLLGFE
Ga0306926_108608161	3300031954	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWDHHPLYHTWKFK
Ga0306926_116432622	3300031954	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFK
Ga0306926_117419601	3300031954	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTLGGCLGLLGF
Ga0306926_117905962	3300031954	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESA
Ga0318530_100544421	3300031959	Soil	DLSTHAEGTCMFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0318531_105569531	3300031981	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWKFK
Ga0306922_112834901	3300032001	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGF
Ga0306922_117334211	3300032001	Soil	MFITVLAIICLNVAVPGTCMTERVINSNQEQLTMGGCLG
Ga0318569_105694621	3300032010	Soil	LIAASHHHDLSTHAEGTCMFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0310911_108659141	3300032035	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLG
Ga0318559_100795803	3300032039	Soil	AGGTCMFITVLAIICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0318549_103292421	3300032041	Soil	MFITVLAIICLNLTVSGTCMTEPVVNSNQEQLTMGGCLGLLGFE
Ga0318558_106337752	3300032044	Soil	MFITVLAIICLNLAVPGTCMTEAVVNSNQEQLTMGGCLGLLGFESAKEFWEHHP
Ga0318506_104997391	3300032052	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWK
Ga0318570_103605321	3300032054	Soil	MFITVLAIICLNIAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKE
Ga0318505_104896681	3300032060	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFWEHHPLYHSWK
Ga0318524_105085341	3300032067	Soil	ICLNVAIPGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEF
Ga0306924_103301921	3300032076	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEF
Ga0306924_113964441	3300032076	Soil	MFITVLAIICLNVAVPGTCMTERVVNSNQEQLTMGGCLGLLGFESAKDFWEHHPL
Ga0318518_106530341	3300032090	Soil	MFITVLAIICLNLTVSGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEFW
Ga0318577_105914691	3300032091	Soil	MFITVLAIICLNVAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFE
Ga0306920_1012643201	3300032261	Soil	MFITVLAIICLNVAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESATEF
Ga0310914_101105961	3300033289	Soil	MFITVLAIICLNVAVPGTCLTEPVVNSNQEQLTMGGCLGLLGFESAKEFWE
Ga0310914_101167092	3300033289	Soil	MFVTLLVTVCINLGVPGTCVTEPVVNSNQDHVTITGCLGLEAFESAKEFWEHHPLYHT
Ga0310914_106427802	3300033289	Soil	MSNRRHHHDLSTHAGGTCMFITVLAIICLNVAITGTCLTEPVVNSNQEQLTIGGCLGLLGFESAKEFWSA
Ga0310914_111535121	3300033289	Soil	MFITVLAIICLNVAVPGTCMTERVINSNQEQLTMGGCLGLLGFESAKDFWEHHPLYH
Ga0310914_117673971	3300033289	Soil	MFITVLAIICLNLAVPGTCMTEPVVNSNQEQLTMGGCLGLLGFESAKEEH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079444

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences