NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F079428

Metagenome Family F079428

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079428
Family Type Metagenome
Number of Sequences 115
Average Sequence Length 84 residues
Representative Sequence MVGEYLTVPLNTSLKGWNARWFYMKQSHPSIRCDADHILESQKSWSERLSSADMEQVRELLDLIKGMRTNGGLVAASFIVHRV
Number of Associated Samples 63
Number of Associated Scaffolds 115

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 31.53 %
% of genes near scaffold ends (potentially truncated) 59.13 %
% of genes from short scaffolds (< 2000 bps) 96.52 %
Associated GOLD sequencing projects 62
AlphaFold2 3D model prediction Yes
3D model pTM-score0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (60.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere
(95.652 % of family members)
Environment Ontology (ENVO) Unclassified
(95.652 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(95.652 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.83%    β-sheet: 0.00%    Coil/Unstructured: 71.17%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 115 Family Scaffolds
PF04195Transposase_28 41.74


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A60.00 %
All OrganismsrootAll Organisms40.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005334|Ga0068869_101539859All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor591Open in IMG/M
3300011119|Ga0105246_12600124Not Available500Open in IMG/M
3300013297|Ga0157378_11370817All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor750Open in IMG/M
3300014745|Ga0157377_11128736All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza → Oryza sativa602Open in IMG/M
3300015267|Ga0182122_1065492All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae517Open in IMG/M
3300015269|Ga0182113_1029732Not Available716Open in IMG/M
3300015274|Ga0182188_1026391Not Available629Open in IMG/M
3300015275|Ga0182172_1022529All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor710Open in IMG/M
3300015276|Ga0182170_1047467Not Available581Open in IMG/M
3300015277|Ga0182128_1033261Not Available646Open in IMG/M
3300015279|Ga0182174_1018370All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor779Open in IMG/M
3300015279|Ga0182174_1026409All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae707Open in IMG/M
3300015279|Ga0182174_1063127Not Available553Open in IMG/M
3300015279|Ga0182174_1076852Not Available520Open in IMG/M
3300015281|Ga0182160_1002367All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1345Open in IMG/M
3300015281|Ga0182160_1036605Not Available638Open in IMG/M
3300015282|Ga0182124_1061027All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor550Open in IMG/M
3300015286|Ga0182176_1062276All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor557Open in IMG/M
3300015286|Ga0182176_1078607Not Available517Open in IMG/M
3300015287|Ga0182171_1035381Not Available657Open in IMG/M
3300015287|Ga0182171_1040859All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor631Open in IMG/M
3300015288|Ga0182173_1069650All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor536Open in IMG/M
3300015289|Ga0182138_1017300Not Available798Open in IMG/M
3300015289|Ga0182138_1032043Not Available676Open in IMG/M
3300015289|Ga0182138_1046590All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor609Open in IMG/M
3300015289|Ga0182138_1053697Not Available585Open in IMG/M
3300015294|Ga0182126_1008080All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1010Open in IMG/M
3300015294|Ga0182126_1015253All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor852Open in IMG/M
3300015294|Ga0182126_1020284All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor787Open in IMG/M
3300015295|Ga0182175_1012245All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae913Open in IMG/M
3300015295|Ga0182175_1044742Not Available637Open in IMG/M
3300015295|Ga0182175_1049500All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor619Open in IMG/M
3300015296|Ga0182157_1034953All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor693Open in IMG/M
3300015296|Ga0182157_1053242Not Available615Open in IMG/M
3300015298|Ga0182106_1095998Not Available514Open in IMG/M
3300015299|Ga0182107_1062049Not Available591Open in IMG/M
3300015299|Ga0182107_1070423Not Available569Open in IMG/M
3300015299|Ga0182107_1073863Not Available561Open in IMG/M
3300015300|Ga0182108_1024157Not Available781Open in IMG/M
3300015302|Ga0182143_1055278All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor611Open in IMG/M
3300015304|Ga0182112_1057261Not Available606Open in IMG/M
3300015307|Ga0182144_1072708Not Available570Open in IMG/M
3300015308|Ga0182142_1011900Not Available977Open in IMG/M
3300015308|Ga0182142_1061537All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor611Open in IMG/M
3300015314|Ga0182140_1046563Not Available665Open in IMG/M
3300015314|Ga0182140_1051443All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor646Open in IMG/M
3300015321|Ga0182127_1040700All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor711Open in IMG/M
3300015321|Ga0182127_1049102All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → BOP clade → Oryzoideae → Oryzeae → Oryzinae → Oryza → Oryza sativa673Open in IMG/M
3300015321|Ga0182127_1053793Not Available655Open in IMG/M
3300015321|Ga0182127_1096462All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor547Open in IMG/M
3300015322|Ga0182110_1044300Not Available691Open in IMG/M
3300015323|Ga0182129_1023933All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Cenchrinae → Setaria → Setaria italica802Open in IMG/M
3300015323|Ga0182129_1049179All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae652Open in IMG/M
3300015323|Ga0182129_1049311Not Available651Open in IMG/M
3300015341|Ga0182187_1122845Not Available601Open in IMG/M
3300015341|Ga0182187_1165338Not Available540Open in IMG/M
3300015342|Ga0182109_1016701Not Available1245Open in IMG/M
3300015342|Ga0182109_1120262Not Available636Open in IMG/M
3300015342|Ga0182109_1215117Not Available509Open in IMG/M
3300015343|Ga0182155_1043170Not Available901Open in IMG/M
3300015343|Ga0182155_1060475Not Available804Open in IMG/M
3300015343|Ga0182155_1185562Not Available541Open in IMG/M
3300015344|Ga0182189_1135583All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor614Open in IMG/M
3300015345|Ga0182111_1084147Not Available754Open in IMG/M
3300015345|Ga0182111_1198657Not Available546Open in IMG/M
3300015345|Ga0182111_1234121All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor511Open in IMG/M
3300015345|Ga0182111_1240023Not Available506Open in IMG/M
3300015346|Ga0182139_1016766Not Available1304Open in IMG/M
3300015346|Ga0182139_1143480Not Available619Open in IMG/M
3300015347|Ga0182177_1120319Not Available664Open in IMG/M
3300015351|Ga0182161_1186010Not Available582Open in IMG/M
3300015355|Ga0182159_1057399All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor1066Open in IMG/M
3300015355|Ga0182159_1263287All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor570Open in IMG/M
3300015361|Ga0182145_1097702All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae634Open in IMG/M
3300017404|Ga0182203_1148866Not Available519Open in IMG/M
3300017407|Ga0182220_1013663Not Available882Open in IMG/M
3300017407|Ga0182220_1033945Not Available694Open in IMG/M
3300017407|Ga0182220_1039241Not Available667Open in IMG/M
3300017409|Ga0182204_1025135All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor800Open in IMG/M
3300017409|Ga0182204_1115824Not Available507Open in IMG/M
3300017410|Ga0182207_1056048All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor736Open in IMG/M
3300017410|Ga0182207_1059316All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae722Open in IMG/M
3300017410|Ga0182207_1087174All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor638Open in IMG/M
3300017411|Ga0182208_1024842All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor828Open in IMG/M
3300017413|Ga0182222_1022644Not Available751Open in IMG/M
3300017415|Ga0182202_1070526Not Available626Open in IMG/M
3300017417|Ga0182230_1059655All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor675Open in IMG/M
3300017420|Ga0182228_1061013Not Available662Open in IMG/M
3300017424|Ga0182219_1060445All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor653Open in IMG/M
3300017424|Ga0182219_1087594Not Available583Open in IMG/M
3300017425|Ga0182224_1035647All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor812Open in IMG/M
3300017427|Ga0182190_1047085Not Available768Open in IMG/M
3300017427|Ga0182190_1132217Not Available543Open in IMG/M
3300017433|Ga0182206_1081000Not Available625Open in IMG/M
3300017433|Ga0182206_1122982All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor547Open in IMG/M
3300017433|Ga0182206_1135351Not Available530Open in IMG/M
3300017438|Ga0182191_1052291All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor762Open in IMG/M
3300017438|Ga0182191_1116059All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae587Open in IMG/M
3300017438|Ga0182191_1135207Not Available558Open in IMG/M
3300017438|Ga0182191_1143738All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor546Open in IMG/M
3300017438|Ga0182191_1154078Not Available533Open in IMG/M
3300017442|Ga0182221_1025616Not Available893Open in IMG/M
3300017443|Ga0182193_1053715All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor779Open in IMG/M
3300017683|Ga0182218_1077635Not Available622Open in IMG/M
3300017685|Ga0182227_1091295Not Available584Open in IMG/M
3300017686|Ga0182205_1116397Not Available574Open in IMG/M
3300017689|Ga0182231_1079538All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor624Open in IMG/M
3300017689|Ga0182231_1086945Not Available598Open in IMG/M
3300017690|Ga0182223_1099714Not Available535Open in IMG/M
3300017690|Ga0182223_1114970Not Available514Open in IMG/M
3300025942|Ga0207689_11079300Not Available677Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere95.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.87%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015267Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015269Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015274Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015275Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015276Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015277Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015279Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015281Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015282Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015286Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015287Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015288Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015289Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015294Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015295Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015296Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015298Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015299Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015300Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015302Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015304Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015307Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015308Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015314Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015321Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015322Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015323Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015341Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015342Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015343Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015344Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015346Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015347Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015351Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015355Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015361Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017404Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017407Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017409Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017410Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017411Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017413Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017415Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017417Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017420Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017424Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017425Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017427Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017433Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017438Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017442Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017443Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017683Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017685Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017686Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017689Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017690Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068869_10153985913300005334Miscanthus RhizosphereMASEYLTVPLNTSLKNWYTRWFYMRQSCPAIRCDTDHILESQRSWLETPNSADMEQVRELLALIKGVRTNGRLVAASFIVRHV*
Ga0105246_1260012413300011119Miscanthus RhizosphereMASEYLTVPLNTLLKGWNARWFYMKQSHPIVRCDADHIPESQKSWSEMPCSTDMEQVRELLGLIKGVKTNSGLVAASFIVCRI*
Ga0157378_1137081713300013297Miscanthus RhizosphereMAGEYLTVPLNTSVKGWNARWFYMKQSHPAIRYDADHIPKSQRSWSKTPSSADMEQVRELLALIKGVRTNGGLVAASFIVRHV*
Ga0157377_1112873613300014745Miscanthus RhizosphereVVGGVYLQLWDGMMSEYLTIPLNMSLKGWNTRWFYMKQNHPTVRYDADHILESQRSWSEMSSNDDMEQVKELLGLIKGVRTND
Ga0182122_106549213300015267Miscanthus PhyllosphereMANEYINVPLNTSLKGWNAMWFYMKQSHPTIRCDVDHILESQKSWSEKPSSADMEQVRELFDLIKGVEVNGGLVAVSFIVGPRPALQREGPPRF*
Ga0182113_102973223300015269Miscanthus PhyllosphereMAGEYITIPLNTSLKGWNARWFYMKQSHPVVRYDIDHVLENQRSWSERPSSADMEQVRELLSLIKGVEMNGGLVAVSFIVCRI*
Ga0182188_102639113300015274Miscanthus PhyllosphereLNTSLKGWNARWFYMRQSHPAIRCDTNHILKSQKSWSKMPSSADMEQVREVIGLIKGVKTNGGLVAASFIVRHI*
Ga0182172_102252913300015275Miscanthus PhyllosphereMAGEYLTVPLNMSLKGWNAKWFYMKQSHLAIRCDVDHILESQKSWSEKLNSVDMEQVRELLDLIKGVEINGGLVVASFIVRRVQP*
Ga0182170_104746723300015276Miscanthus PhyllosphereMAGEYITVPLNNSLKGWNARWFYMKQSHPTIRCNVDHILENQRSWSERLSSANMEQVRELLSVIKGMKMNDRLVVASFIVCRIQPCK
Ga0182128_103326113300015277Miscanthus PhyllosphereVYFQLYDRMAGEYIIVSLNTLLKGWNTRWFYMKKSHPAIRYDVDHILESQKSWSKRPSSADMEQVRELLGLIKSVKMNGALVAASFIVCHV*
Ga0182174_101837013300015279Miscanthus PhyllosphereVPLNTSLKGWNARWFYMKQSHPAVRCDADHILESQRSWSEMPSSDDMEQVRELLSLIKGVRTNGGLVAASFIMRR
Ga0182174_102640923300015279Miscanthus PhyllosphereMAGEYLTVLLNTSLNGWNARWFYMKQRHPAIRCDANRIPESQKSWSERPSSADVDQIRELLSLIKGVKMNRRLVATRFIVRRV*
Ga0182174_106312713300015279Miscanthus PhyllosphereMVGEYLTVPLNTSLKGWNARWFYMKQSHPSIRCDADHILESQKSWSERLSSADMEQVRELLDLIKGMRTNGGLVAASFIVHRV*
Ga0182174_107685213300015279Miscanthus PhyllosphereMAGEYLTVPLNTSLKGWNARWFYMKQSHPAIRCDVDHILENQRSWSEKSTSANMEQVKELLGIIRGMKMNGVVVAVSFIVRHI*
Ga0182160_100236713300015281Miscanthus PhyllosphereMAGEYLTVPLNTSLKGWNARWFYMKQSHPVVRCDADHIPESQRSWSEASNSANKEQVKELLALIKGMRTNGGLVAASFIVR
Ga0182160_103660523300015281Miscanthus PhyllosphereMVGEYLIVPLNMSLKGWNARWFYMRQSHPAIRCNADHIPENQRSWSETPSSDDMEQVKELLGLIKGVRTNGVLVAASFIVRRV*
Ga0182124_106102713300015282Miscanthus PhyllosphereMVGEYITVPLNTSLKGWNARWFYMKQSHPAICYDVDHVPKNQRSWSEKPSSADMEQVRDLLGLIKGIKMNSTLVAVSF
Ga0182176_106227613300015286Miscanthus PhyllosphereMASEYITVLLNTLLKGWNARWFYMKQGNHAIRCDVDHIPESQKSWSKKPSSANMKQVRELLGLIKGMKTNGGLVAIS
Ga0182176_107860713300015286Miscanthus PhyllosphereDGMASEYINVPLNTSLKGWNSKWLYMKQSHPTIRCDVQHILENQKSWSEKPNSADMEQVRELLDLIKGVEITGELVATSFIESCI*
Ga0182171_103538113300015287Miscanthus PhyllosphereKKGDGVYLQLRDGMASEYITVLLNTSLKGWNARWFYMKQSHPAIRCDVDHIPESQKSWLEKPSSADMEQMRELLNLIKGMEISSGLVAASFIVRRI*
Ga0182171_104085913300015287Miscanthus PhyllosphereMASEYLTIPLNMSLKGWNTRWFYMKQSHPAVRCNADHIPESQRSWSELPSNDNMEQVNELLSLIKGVKTNGGLVAASFIVCC
Ga0182173_106965023300015288Miscanthus PhyllosphereVVGGVYLQLRDGMAGEYLTVPLNTSLKGWNARWFYMKQSHPAVRFDTDHIPESQRSWSEMPNNAYKEQVRELLSLIKGMRTNGGLVAASFIVRRVQ
Ga0182138_101730023300015289Miscanthus PhyllosphereMASEYITVPLNTSLKGWNARWFYMKQSHPAICYDVDHVPKHQRSWSEKPSSADMEQVSELLNLIKGMEINGGLVVASFIVRHV*
Ga0182138_103204313300015289Miscanthus PhyllosphereVGGVYLQLQDGMVSKYSNQPLNTSLKGWNDWWFYLKQSHPVICCDVDHISESQKSWSEMSSSADMEQVRELLGLIKGVKTNGGLVAASFIVCHV*
Ga0182138_104659013300015289Miscanthus PhyllosphereMVGEYLTKPLNTSLKGWNTRWFYMKHSYPAIRYDADHILESQKSWSKRPSSADMEQVRELLGLIKGIKMNGGLVATSFIVRRVQPCKER
Ga0182138_105369723300015289Miscanthus PhyllosphereMAGEYLTVPLNTSLKGWNARWFYMKHSHPAVHFDVDHIPESQMSWSEAPNSADMEQVKELLALIKGVRTNGGFVAASFIVRRV*
Ga0182126_100808023300015294Miscanthus PhyllosphereMASEYLTVPLNTLLKGWNTRWFYMKQSHPAIRCDVDHVLENQRSWLERSSSADMEQVRELLGLIKDVKMNDGSVVASF
Ga0182126_101525323300015294Miscanthus PhyllosphereMASEYINVPLNTSLKGWNSKWFYMKQSHPTIHCDVHHILENQKSWLEKPNSDDMEQVRELLDLLEGIEISGELVTTSFIVRRI*
Ga0182126_102028433300015294Miscanthus PhyllosphereMAGEYLTVSLNMLLKGWNARWFYMKQSHPAVRCDVDHIPKSQKSWSERPSSADMEQVSELLDLIKGVRTNGGLVVVSFIVRRIQPYNPTSRGPT
Ga0182175_101224533300015295Miscanthus PhyllosphereMVGEYLTVLLNTSLKGWNTRWFYMKQSHLAVRYNADHIPKSWRTWSEMLSSADMEQVRELLGLIKGMKT
Ga0182175_104474213300015295Miscanthus PhyllospherePLNTPLKGWNTMWFYIKQSHPIVRCDADHIPESQKRWSEMPSSADMEQVKELLGLIKGVKTNGGLVATSFIVRRI*
Ga0182175_104950023300015295Miscanthus PhyllosphereMVSEYITVPLNTSLKGWNARWFYMKQSHPAIRCDIDHNPESQKSWLEKPSSADMEQVRELLNLIKGVEINGGLVAASFLVHHV*
Ga0182157_103495323300015296Miscanthus PhyllosphereMAGEYLTVPLNTSLKGWNARWFYMRQSLPANRCDTDHILESQKSWSEMPNSADMEQVRELLNIIKGVKTNGRLVVASFIVRRVQPCKERAH
Ga0182157_105324213300015296Miscanthus PhyllosphereMVGEYIIVPLNTSLKGWNTKWFYMKHIYPTIRCDVDHILENQKSWSEKPSSADMDQVRELLCLIKGVKMNGTLVAVSFIVR*
Ga0182106_109599813300015298Miscanthus PhyllosphereMYLQLHDGMAGEYITVPLNTSLKWLNARWFYMKQSHPAIRCNIDHVLENQRSWSKKPSSADMEQVRELLSLIKGVKMNGELVATSFIVRRVQPYK*
Ga0182107_106204913300015299Miscanthus PhyllosphereVPLNTSLKGWNAWWFYLEQSHPAIRCDADHILESQKSWSEWPSSADMEQVRELLDLIKGMKTNGGLVAASFIVRRV*
Ga0182107_107042313300015299Miscanthus PhyllosphereMVSEYINVLLNTSLKGWNSMWFYMKQSHPTICCDVHHVPESQKSWSEKLNIADMEQVRELLDLIKGVKINDELVAASFIVRRVGPPELRLQG*
Ga0182107_107386313300015299Miscanthus PhyllosphereMVGEYLTVPLSMSLKGWNTRWFYMKQSHPAIRCDTDHIPESQKSWLELPSSADMEQVRELLGLIKGVKTNGGLVVVSFIVRRVQPCK
Ga0182108_102415723300015300Miscanthus PhyllosphereYITMPLNTSLKGWNARWFYMKQSYPTIRCDVDHISENQRSWSEKPSSAGMDQARELLGLIKGMKLNIVLVAASFIVRRV*
Ga0182143_105527813300015302Miscanthus PhyllosphereVVGGVYLQLRDGMVGEYLTVPLNTSLKGWNARWFYMKQSHIKIRYDVAHIPESQKSWSKKPSSADIEQVKELLVLIKGVK
Ga0182143_107597813300015302Miscanthus PhyllosphereMASEYINVPLNTSLKGWNSKWFYMKQSHPTIRYDVHHIPENQRSWLEKPNSAEMEQVMELLDLIRGVEIRGELVAASFIVRCV*
Ga0182112_105726113300015304Miscanthus PhyllosphereMVGEYITIPLNTSLKGWNARWFYMKQSYPAICCDINHVSENQRTWSERPSSADMEQVRELLCLIKGVKMNGGLVAASFIVRRI*
Ga0182144_107270833300015307Miscanthus PhyllosphereMEGVYLTMPLNTSLKGWNARWFYMRQSHPVVRCDTDHISESQRSWSKMPSNTDMEQVRELLSLIQGVKTNDGLVVASFIVRRVQPCKERAHPVFEF
Ga0182142_101190013300015308Miscanthus PhyllosphereHTMPLNTSLKGWNARWFYMKQSHPAIRCDADHIPKSQKSWSKRPSSADMDQVRELLGLTKGVKPNSGLVAASFIVCRI*
Ga0182142_106153723300015308Miscanthus PhyllosphereVVDEVYLQLHDGMAGEYLTIPLNTSLKGWNARWFYMKQSHPVVRCDTDHIPKSQRSWSETPNNTDMEQVRELLALIKGVRTNGGLVAVSFIVRRV*
Ga0182140_104656313300015314Miscanthus PhyllosphereLTVPLNTSLKGWNARWFYMKQSYLAVRCDADHIPESQRSWSEMPSSDDMEQVKELLSLIKGVKTNGGLVAASFIVRCVQPCKEKVAPRL*
Ga0182140_105144313300015314Miscanthus PhyllosphereMANEYINVPLNTSLKGWNARWFYMKQSHPTIRCDVDHILESQKSWPEKPNCANMEQVRVLLDLIKGMEIIDGLVAVSFIVRCV*
Ga0182127_104070023300015321Miscanthus PhyllosphereMAREYLAVSLSTSLKGWNTRWFYMKQSHHAVRCNVDHIPKSQKSWSETPSSANMEQVRELLGLIKGVKTNGGLVVASFIVRRI*
Ga0182127_104910223300015321Miscanthus PhyllosphereMASEYLTVLLNTSLKGWNTRWLYMKQNHPAVCCDTDHILENQRSWSEMPSNDNMEQVKELLGLI*
Ga0182127_105379313300015321Miscanthus PhyllosphereVGGVYLQLRDGMAREYLTIPLNTLLKGWNTRWFYMRQSHPAVRCNTDHILESQRSWSELPSKDGMDQVNELLGLIKGVKTNGGLVARVS*
Ga0182127_109646213300015321Miscanthus PhyllosphereMVSEYLTVPLNTSLKGWNTRWFYMKQSHPAVLCNADHILESQRSWSELPSNDDMEQVNELLGLIKGMKTNGGLV
Ga0182110_104430023300015322Miscanthus PhyllosphereMAGEYLTVPLNTSLKGWNIRWFYMKQSHLAVCCNVDHILQSQRSWSEMPSNDDMEHVKELLSLIKGVRTKADW*
Ga0182129_102393313300015323Miscanthus PhyllosphereGGSKVVSGVYIQLHDGMAGEYLTVLLNTSLKGWNARWFYMKQSHPAIRYDANHIPESQRSWSEMPSSADMEQVRELLGLIKDVKTNGGLVVASFIVRRI*
Ga0182129_104917923300015323Miscanthus PhyllosphereMAGEYITVPLNTSLKGWNARWFYMKQSHPTIRCDVNQVSENQRSWSEKTSSADMEQVRELLGLIKGVKMNGALVAASFIVCCV*
Ga0182129_104931113300015323Miscanthus PhyllosphereGVYLQLRDGMAGEYLTMPLNTLLKGWNASWFYMKQSHPTIRCNADHISESQKSWLEKPSSADMEQVRELLGLIKGVNTNGGLVAASFIVRRV*
Ga0182187_112284523300015341Miscanthus PhyllosphereMVGEYLTVPLNMSLKGWNARWFYKKQSHPAIRCDAYHIPESQKSWSEKPSSADMEQVRELLGLIKGVKTNGGLVAMSIIVRHV*
Ga0182187_116533813300015341Miscanthus PhyllosphereMANKYITIPLNTSLKGWNARWFNMKQSHIAIRCDVYHILESQKSWSEKPNSADMEQVRELLGLIKGMKTNGGLVAASFIVRHI*
Ga0182109_101670123300015342Miscanthus PhyllosphereMYLQLHDRMAGKYISVLLNTLLKGWNARWFYMKQSHPAIHCDVDHIPENQRSWSEKPSSADMEQVRKLLDLIKGMKTNGGLVAASFIVRCI*
Ga0182109_112026213300015342Miscanthus PhyllosphereVDGVYLQLWDGMASEYITVLLNTSLKGWNAMWFYMKQSHPTVRCDADHIPESQKSRSEMPSSADMEQVRELLGLIKGMKTNGVLVVASFIVRRV*
Ga0182109_121511713300015342Miscanthus PhyllosphereMVGEYLTVLLNTSLKGWNARWFYMRQSHPAIRCDADHIPENQRSWSEMPSSDDMEQVKELLVLIKGVRTNGGLVAVSFI
Ga0182155_104317023300015343Miscanthus PhyllosphereLNTSLKGWNARWFYMKQSHPAIHYDVDHVSENQRSWSERPSSTDMEQVRELLGLIKGVRINDRLVAASFIVRRV*
Ga0182155_106047523300015343Miscanthus PhyllosphereGEYLTVPLNMSLNRWNARWFYMKQSHPAIHYDIDHILESQKSWSERPSSADMEQVRELLDLIKGIKTNGGLVAASFIVHRV*
Ga0182155_118556223300015343Miscanthus PhyllosphereMAGEYLTVLLNTSLKGWNARWFYMKQSHPAVCCNADHILKSQRSWSETPSSADMEQVMELLGLIKGMRTNGGLVVASFIVRRV*
Ga0182189_113558313300015344Miscanthus PhyllosphereMASEYLTIPLNTSLKGWNTRWFYMRQSHLAVRCNTDHIPESQRSWSELPSKDDMDQVSELLGLIKGVKTNGGLVVASFIVRRIQPCKK
Ga0182111_108414723300015345Miscanthus PhyllosphereMAGEYITVLLNTSLKGWNVRWFYMKQSHPTVRCGVDHIPESQKSWSKKPSSANMELVREFLGLIKGMKTNGGLVAVSFIVRHV
Ga0182111_119865713300015345Miscanthus PhyllosphereIPLNTSLKGWNARWSYMKQSHPTICYDVDHISESQKSLSEKPSSADMEQVRELLGLIKGVKANGGLVAASFIVRRI*
Ga0182111_123412123300015345Miscanthus PhyllosphereMVGEYLTIPLNTSLKGWNTRWFYMKQSHPAIRCDVDHVPENQRSWSERSSIADMKQVRELLGLIKGMKMND*
Ga0182111_124002323300015345Miscanthus PhyllosphereMVGECLTVLLNTSLKGWNTRWSYMKQRHPAVRCDADHISESQSSWLETSNSTDMEQVRELLALIKGVGTNGGLVAASFIVRRM*
Ga0182139_101676613300015346Miscanthus PhyllosphereMVSEYITVLLNTSLKGWNAMWFYMKQSHLAIHCDVDHISESQKSWSEKPSSADMEQVRELLDLIKGVEINGELVVASFIVRRV*
Ga0182139_114348013300015346Miscanthus PhyllosphereVGDYITVPLNISLKGWNARWFYMKQSHPVVRCDADHIPESQKSWPEMPNIADMEQVRELLGLIKGVKTNGGLVAASFIVRRV*
Ga0182177_112031913300015347Miscanthus PhyllosphereYLQLRDGMASEYLTVPLNMSLKGWNTRWFYMKQSHPTIYCDTNHIPESQKSRSEFPSNADMEQVRELLGLIKGVKTNGGLVAASFIVRRVQP*
Ga0182161_118601023300015351Miscanthus PhyllosphereMLGEYLTMLLNRSLKGWNARWFYMKQSHPVVRCDADHILESQRSWSEMANNADMEQVRELLALIKGMRTNGGLVAASFIIRHV*
Ga0182159_105739913300015355Miscanthus PhyllosphereMVGEYLTVPLSTSLKGWNARWFYMKQIHPGICCDADHISESQKSWSEMSSSADMEQVRELLGLIKGVKTNGGLVVVSFIVR
Ga0182159_123825013300015355Miscanthus PhyllosphereMKGWNVRWFYMKQIHLAIRYDADYISESQKSWSEMPSNTDMEQVREQLGLIKGMKTNSGLVAASFIVPSFLSFFGN*
Ga0182159_126328713300015355Miscanthus PhyllosphereMTREYLTVPLNTSLMGWNTRWFYMKQSHPAVCCNADHIPESQRSWSEMPSNDDMEQVKELLGLIKGVRTNGGLVAASFIVRRVQPCKERAHPGF
Ga0182145_109770213300015361Miscanthus PhyllosphereMAGEYITVPLNTSLKGWNARWFYMKQSHPAIRCDVDHVLENQRSWSKKPSSADMEQVRELLGLINSVKMNGGLVAAEARRGPTQAS*
Ga0182203_114886623300017404Miscanthus PhyllosphereAGEYLTVTLNTSLKGWNARWFYIKQSHPAVRCDADHILENWRSWSETPNSADMEQVRELLALIKGMRTNGRLVATSFIVRHV
Ga0182220_101366313300017407Miscanthus PhyllosphereLRDGMAGEYLTEPLNTSLKGWNARWFYIKQSHIVIRCDVDHILESQKSWSEKPNSADMEQVRELLGLIKGVKTNGGLVVVSFIVRRI
Ga0182220_103394513300017407Miscanthus PhyllosphereGMASEYITVPLNTSLKGLNARWFYMKQSHPAIHCDIDHILESQKSWSEKPNRSDMEQVRELLNLIKGMEINSGLVAASFIVRRI
Ga0182220_103924123300017407Miscanthus PhyllosphereVVGGVYLQLWNGMASECITVPLNTSLKGWNARWFYMKQSHPAICCDIDHIPESQKSWSEKLSSVDMEQVSELLNLIKGMEINGGLVVASFIVRHV
Ga0182204_102513513300017409Miscanthus PhyllosphereMASEYLTVPLNTSLKGWNTRWFYMKQSHPAVRCNANHIPESQRSWLELPSNDDMEQVKELLGLIKSMRTNGGLVAASFIVRRIQPC
Ga0182204_111582413300017409Miscanthus PhyllosphereLNTSLKRWNARWFYIKQSHPAIRCDVDHILESQKSWSEKPSSADMEQVMELLDLIKDVKTNGGLVAVSFIVCRV
Ga0182207_105604823300017410Miscanthus PhyllosphereMVSEYIIVPLNTSLKGWNTRSFYMKQCHHTIRCNIDHIPESQKRRSKKPSSADMEQMRELLDLIKGVEINGGLVAASFIVRCV
Ga0182207_105931613300017410Miscanthus PhyllosphereVYLQLRGGMAGEYFTVPLNTSVKGWNARWFYMKQSHPTVRCDADHIPESQWSWSKTPSSDDMEQVRELLALIMGMRTNGGLVAASFIVHARATL
Ga0182207_108717423300017410Miscanthus PhyllosphereMASEYITIPLNTSLKGWNARWFYMKQSHPAICYDVDHVPESQKSWSEKPSSANMEQVRELLNLIKCVEINGGLVAASF
Ga0182208_102484213300017411Miscanthus PhyllosphereLHDGMTGEYLTMPLNMSLKGWNARWFYIRQSHPAICCDANHILENQRSWSETPSNDDMEQVKELLSLIKGVRTNDRLVAVSFIVCRIQ
Ga0182222_102264413300017413Miscanthus PhyllosphereSIYLQLQDGMASEYITVPMNTSLKVWNSRWFYMKQSHPTILSDIDHIPESQKSWSEKLGSTHVEQVRELLDLIKGMEINGGLVAASFIVRRVQP
Ga0182202_107052613300017415Miscanthus PhyllosphereLHNGMVGEYLIVSLNTSLKGWNTRWFYMKQNHPTIHCDADHIPESQRSWSETPSSADMEQVRELLGLIMGMKTNGGLVAASFIVRRI
Ga0182230_105965513300017417Miscanthus PhyllosphereVYLQLRDGMAGEYLTVPLNTSLKGWNARWFYMRQSHPAIRCDTDHIPENQRSWSEMPSSDDMEQVKELLGLIKGVRTNGGLVAASFIVRRIQPCKERAHPGF
Ga0182228_106101313300017420Miscanthus PhyllosphereMAGEYLTLPLNTSLKGWNTRWFYMKQSHPVVHCDTDHIPESQKSWSETPSSTDMEQVRELLGLIKGVKTNSGLVVASFIVRHI
Ga0182219_106044513300017424Miscanthus PhyllosphereLRDGMAGEYLTVPLTTSLKGWNARWFYMRQSHPAIRCDTDHILENQRSWSETPSNDDMEQVKELLSLIKGVRTNDRLVAVSFIVHRV
Ga0182219_108759413300017424Miscanthus PhyllosphereIIVPLNTSLKGWNVMWFYMKQSHPAIRCDIDHVPENQRSWSEKLSSADMEQVRELLGLIKGVKMNGALVAASFIVRHI
Ga0182224_103564713300017425Miscanthus PhyllosphereMAGEHLTVPLNTSLKGWNARWFYMKQSHLAVRCDADHILESRRSWSETPNSADMEQVRELLALIRGVRTNSGLVVASFIVRHM
Ga0182190_104708523300017427Miscanthus PhyllosphereMAGECLTVPLNTSVKGWNARWFYMKQSHPAIHCDADHIPESQRSWSETPSNNDMEQVRELLALIKGMRTNGGLVAVSFIVRHV
Ga0182190_113221723300017427Miscanthus PhyllosphereQLCDGMVGEYLTVLLRTSLKGWNTRWFYMKQRHPIVRCNADHIPGSQRSWSEMTSSADMEQVRELLILIKGMKTNGGLVAASFIVRHI
Ga0182190_116630913300017427Miscanthus PhyllosphereKGGGGSRVVDGVYLQLRDGMAGEYITVPLNTSLKGWNARWFYMKQSHPAIRCDIDHVPENQKSWPEKLSSVDMEQVRELLSLIKGIKMNDVLVAASFIVRRV
Ga0182206_108100013300017433Miscanthus PhyllosphereDGMAGKYITIPLTTSLKGWNARWFYMKQSHPAIHCDVDHIPENQRSWSEKPSSADMEQVRKLLDLIKGMKMNGGLVVVSFIVHHI
Ga0182206_112298213300017433Miscanthus PhyllosphereLRDGMAGEYLTMPLNTSLKGWNARWFYMKQSHPVVRFDADHIPESQRSWSEALNSADMEQVKELLALIKGVRTNGGLVA
Ga0182206_113535113300017433Miscanthus PhyllosphereVPLNTSLKGWNTRWFYMKQSHPAIRCDADHISKSQRSWSKTPSSADMEQVRELLALIKGVRTNGRLVAASFIVRCV
Ga0182191_105229113300017438Miscanthus PhyllosphereLRDGMVGEYLTMPLNTSLKGWNVRWFYMRQGHPAIRCDADRILENQRSWSETPSSDDMEQVKELLGLIKGVRTNDRLVA
Ga0182191_111605913300017438Miscanthus PhyllosphereMVVGGVYLQLHDGMAGEYLTVPLNMSLKGWNVRWFYMRQSHLAFRCDADHIPESQKSWSEMSSNADMEQVRELLGLIKGVK
Ga0182191_113520713300017438Miscanthus PhyllosphereMVGEYLTMPLNTSVKGWNVRWFYMKQSHPAVRCDADHIPESQKSWSETPNSADMEQVRELLSLIKGVKTNG
Ga0182191_114373813300017438Miscanthus PhyllosphereMVSKYITIPLNTSLKGWNARWFYMKQSHPAIRCDVDHIPESQKSWSKKPSSADMEQVRELLNLIKGVEINDRLVAACFIV
Ga0182191_115407813300017438Miscanthus PhyllosphereVVGGVYLQFHDEMAGEYITVPLNTSLKGWNARWLYMKQSHPAMHYDVNHIPENQRSWSEKPSIADIEQVEELLGLIKGVKMNGA
Ga0182221_102561613300017442Miscanthus PhyllosphereVVGDVYLQLHDEIVGEYIIVPLNTSLKGCNARWFYMKQSHPAIRCDANRIPESQKSWSERPSSADMEQVRELLGLIKGVKTNDRLVVVSFIVCRI
Ga0182193_105371513300017443Miscanthus PhyllosphereLHDAMAREYLTVLLNTSLKGWNTRWFYMKQSHPVVRCDADHISESQRSWSETPNSTDMEQVKELLGLIKGVKTNGGLVA
Ga0182193_115646613300017443Miscanthus PhyllosphereMYLQLCDGMAGEYLTMPLNTLLKGWNARWFYMKQSHLAIRCDADYIPESQKSWSERPSSADMEQVREVLGLIKGVKTNGGLVAASFIVHHIQSCKERAHAGYDF
Ga0182218_107763513300017683Miscanthus PhyllosphereLQLRDGIAGEYLTIPLNMSLKAWNARWIYMKQCHPAIRCDADHILESQKSWLERLSSADMDQVRELLSLIKGVKMNIGLVVASFIVRRI
Ga0182227_109129523300017685Miscanthus PhyllosphereVVGGVYLQLCDEMAGEYITVPLNTSLKGWNARWFYMKQSHPAIRCDVDHVSESQRSWSERPSSADMKQVRELLGLIKGVKTNDRLVVVSFIVCRI
Ga0182205_111639713300017686Miscanthus PhyllosphereMASEYITVPLNTSLKGWNARWFYMKQSHPAIRCDFDHIPESQKSWSEKPNNADMEQVGELLDLIKGMEINGGLVVASFIVRRI
Ga0182231_107953813300017689Miscanthus PhyllosphereVVGGVYLQLRDGMAAEYLTVPLNTSLKGWNARWFYMKQSHPAVCCDADHIPESQRSWSDTSNSTDMEQVRELLALIKGMRTNGGLVAAS
Ga0182231_108694513300017689Miscanthus PhyllosphereLKGWNARWFYMKQSHPAVRCNADHILESQRSWSELPSNDDMEQVKELLGLIKGVRTNGGLVAASFIVRYV
Ga0182223_109971413300017690Miscanthus PhyllosphereDGMVGEYLIVALNTSLKGWNTMWFYMKQSHPTVRCDADHIPESQKSRSEMPSSADMEQVRELLGLIKGMKTNGGLVAASFIVRLV
Ga0182223_111497023300017690Miscanthus PhyllosphereVVGGVYLQLRDGMAGEYLTVPLNTSLKGWNARWFYMKQSHPAIRCDANRIPESQKSWSERPSSADVDQIRELLSLIKGVKMNK
Ga0207689_1107930023300025942Miscanthus RhizosphereRDGMASEYITVPLNTLLKAWNARWFYMKQSHIAIHYDVDHIPESQKSWSEKPNSADMEQVRELLDLLEGIEISSELVAVSFIVHQI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.