Metagenome / Metatranscriptome Family F079348

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079348
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	65 residues
Representative Sequence	MAKRKHRARKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNIL
Number of Associated Samples	83
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.81 %
% of genes near scaffold ends (potentially truncated)	92.24 %
% of genes from short scaffolds (< 2000 bps)	89.66 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.034 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.379 % of family members)
Environment Ontology (ENVO)	Unclassified (51.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.276 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.08% β-sheet: 0.00% Coil/Unstructured: 36.92%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF04909	Amidohydro_2	38.79
PF01321	Creatinase_N	1.72
PF03466	LysR_substrate	1.72
PF01557	FAA_hydrolase	0.86
PF00557	Peptidase_M24	0.86
PF03403	PAF-AH_p_II	0.86
PF00126	HTH_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	1.72
COG4188	Predicted dienelactone hydrolase	General function prediction only [R]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.03 %
Unclassified	root	N/A	18.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.03 %
Unclassified	root	N/A	18.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.03 %
Unclassified	root	N/A	18.97 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.31 %
Unclassified	root	N/A	18.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	79.31 %
Unclassified	root	N/A	18.97 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	64.66 %
Unclassified	root	N/A	18.97 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.66 %
Unclassified	root	N/A	18.97 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.66 %
Unclassified	root	N/A	18.97 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	64.66 %
Unclassified	root	N/A	18.97 %
Pseudorhodoplanes sinuspersici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	0.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig544467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300000956\|JGI10216J12902_104199414	Not Available	633	Open in IMG/M
3300001431\|F14TB_103419169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	736	Open in IMG/M
3300004633\|Ga0066395_10356147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300004633\|Ga0066395_10358127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	812	Open in IMG/M
3300005332\|Ga0066388_102023323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1033	Open in IMG/M
3300005332\|Ga0066388_102213646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	992	Open in IMG/M
3300005363\|Ga0008090_10129633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300005363\|Ga0008090_10130655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300005435\|Ga0070714_101304917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	708	Open in IMG/M
3300005445\|Ga0070708_102049127	Not Available	529	Open in IMG/M
3300005447\|Ga0066689_10490393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300005471\|Ga0070698_100966237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	798	Open in IMG/M
3300005471\|Ga0070698_101679242	Not Available	587	Open in IMG/M
3300005536\|Ga0070697_100681222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	906	Open in IMG/M
3300005536\|Ga0070697_101529297	Not Available	596	Open in IMG/M
3300005713\|Ga0066905_100729105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300005713\|Ga0066905_101873894	Not Available	554	Open in IMG/M
3300005764\|Ga0066903_103130743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300005764\|Ga0066903_106305277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300005764\|Ga0066903_107098352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300005764\|Ga0066903_108051648	Not Available	540	Open in IMG/M
3300006049\|Ga0075417_10039886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1987	Open in IMG/M
3300009792\|Ga0126374_11544051	Not Available	546	Open in IMG/M
3300010043\|Ga0126380_10710143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300010046\|Ga0126384_10635701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	938	Open in IMG/M
3300010046\|Ga0126384_10857054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300010046\|Ga0126384_12304142	Not Available	520	Open in IMG/M
3300010048\|Ga0126373_11070304	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300010048\|Ga0126373_11516530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300010358\|Ga0126370_11587892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300010359\|Ga0126376_10442454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1185	Open in IMG/M
3300010359\|Ga0126376_11110208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300010361\|Ga0126378_10379084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1525	Open in IMG/M
3300010362\|Ga0126377_10228941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1798	Open in IMG/M
3300010362\|Ga0126377_11795016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300010362\|Ga0126377_12953115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300010366\|Ga0126379_13747539	Not Available	509	Open in IMG/M
3300010376\|Ga0126381_101287752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1056	Open in IMG/M
3300010376\|Ga0126381_104706465	Not Available	525	Open in IMG/M
3300010398\|Ga0126383_13011307	Not Available	550	Open in IMG/M
3300012202\|Ga0137363_10341283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1238	Open in IMG/M
3300012971\|Ga0126369_10321650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1557	Open in IMG/M
3300012971\|Ga0126369_11108551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880	Open in IMG/M
3300016319\|Ga0182033_10301225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1323	Open in IMG/M
3300016319\|Ga0182033_11249658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300016357\|Ga0182032_10310908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1248	Open in IMG/M
3300016357\|Ga0182032_10614698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300016371\|Ga0182034_10073965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2349	Open in IMG/M
3300016371\|Ga0182034_11013405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	717	Open in IMG/M
3300016387\|Ga0182040_10244257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1345	Open in IMG/M
3300016445\|Ga0182038_10363560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1203	Open in IMG/M
3300021439\|Ga0213879_10143314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300021560\|Ga0126371_11831773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300021560\|Ga0126371_13669747	Not Available	518	Open in IMG/M
3300025915\|Ga0207693_11472041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300025922\|Ga0207646_11275530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300025939\|Ga0207665_10594346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300027874\|Ga0209465_10369224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300027874\|Ga0209465_10372063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300028047\|Ga0209526_10115806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1883	Open in IMG/M
3300031543\|Ga0318516_10123231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1479	Open in IMG/M
3300031544\|Ga0318534_10748455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300031545\|Ga0318541_10025061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2899	Open in IMG/M
3300031546\|Ga0318538_10077343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1683	Open in IMG/M
3300031546\|Ga0318538_10122743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1357	Open in IMG/M
3300031549\|Ga0318571_10014492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1950	Open in IMG/M
3300031561\|Ga0318528_10607339	Not Available	586	Open in IMG/M
3300031681\|Ga0318572_10008547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4746	Open in IMG/M
3300031682\|Ga0318560_10002376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → Pseudorhodoplanes sinuspersici	7000	Open in IMG/M
3300031719\|Ga0306917_10142484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1770	Open in IMG/M
3300031723\|Ga0318493_10336845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	818	Open in IMG/M
3300031744\|Ga0306918_11256746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300031748\|Ga0318492_10589081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300031751\|Ga0318494_10006798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5217	Open in IMG/M
3300031751\|Ga0318494_10565151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300031764\|Ga0318535_10056408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1652	Open in IMG/M
3300031770\|Ga0318521_10329289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	902	Open in IMG/M
3300031771\|Ga0318546_10457952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	893	Open in IMG/M
3300031777\|Ga0318543_10209721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300031779\|Ga0318566_10053357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1926	Open in IMG/M
3300031779\|Ga0318566_10606950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300031780\|Ga0318508_1000864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5094	Open in IMG/M
3300031780\|Ga0318508_1258327	Not Available	501	Open in IMG/M
3300031782\|Ga0318552_10076067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1629	Open in IMG/M
3300031798\|Ga0318523_10267248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300031798\|Ga0318523_10471183	Not Available	622	Open in IMG/M
3300031805\|Ga0318497_10142249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1309	Open in IMG/M
3300031805\|Ga0318497_10225458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1037	Open in IMG/M
3300031831\|Ga0318564_10055401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1729	Open in IMG/M
3300031832\|Ga0318499_10002875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4800	Open in IMG/M
3300031845\|Ga0318511_10066684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1478	Open in IMG/M
3300031845\|Ga0318511_10083018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1340	Open in IMG/M
3300031845\|Ga0318511_10333939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300031846\|Ga0318512_10411412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300031859\|Ga0318527_10262782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	734	Open in IMG/M
3300031860\|Ga0318495_10055742	Not Available	1753	Open in IMG/M
3300031890\|Ga0306925_10963674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	872	Open in IMG/M
3300031893\|Ga0318536_10251478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300031894\|Ga0318522_10274936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300031896\|Ga0318551_10169224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1199	Open in IMG/M
3300031945\|Ga0310913_10627549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300031981\|Ga0318531_10090847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1337	Open in IMG/M
3300032009\|Ga0318563_10564069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300032025\|Ga0318507_10217736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	825	Open in IMG/M
3300032035\|Ga0310911_10050939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2155	Open in IMG/M
3300032039\|Ga0318559_10528891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300032064\|Ga0318510_10013240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2472	Open in IMG/M
3300032067\|Ga0318524_10750557	Not Available	515	Open in IMG/M
3300032261\|Ga0306920_104241209	Not Available	516	Open in IMG/M
3300033289\|Ga0310914_11712825	Not Available	532	Open in IMG/M
3300033290\|Ga0318519_10082008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1699	Open in IMG/M
3300033290\|Ga0318519_10152481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1292	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.14%
Plants	Host-Associated → Plants	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.31%
Loam	Environmental → Terrestrial → Soil → Loam	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.72%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.45%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.45%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_06707010	2124908045	Soil	MAKRKPSTRSVRRDQRAPRGAAPTPSSPASEDQISYSSLSLHALFEQQARQLIDRTDLDEEQKQNILLAL
JGI10216J12902_1041994141	3300000956	Soil	MTIGETAEIRMAKRKRRTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQN
F14TB_1034191692	3300001431	Soil	MTIGEKIRMAKRKHRARNVRRVAAGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQN
Ga0066395_103561472	3300004633	Tropical Forest Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNI
Ga0066395_103581272	3300004633	Tropical Forest Soil	MAKRKQRARNVRRVAAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQN
Ga0066680_105384982	3300005174	Soil	MIAKRKQRARNVRRVAAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQ
Ga0066388_1020233231	3300005332	Tropical Forest Soil	MAKRKQRARNVRRVPAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNIL
Ga0066388_1022136462	3300005332	Tropical Forest Soil	LSHKPRSRKVRRAPAKEQASAKPASEGTPEDQISYSALSLHALFEQQARQLLDRTDLD
Ga0008090_101296332	3300005363	Tropical Rainforest Soil	MAKRKRRTRKVWRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCC
Ga0008090_101306551	3300005363	Tropical Rainforest Soil	MAKRKHRSRKVRRIPAEGQAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMS
Ga0070714_1013049171	3300005435	Agricultural Soil	MAKRKHRTRKVRRAPTAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILV
Ga0070708_1020491271	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRKHRTRKVRRAPTAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQ
Ga0066689_104903932	3300005447	Soil	MTIGETAEIRMAKRKRRTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQK
Ga0070698_1009662371	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRKHRTRKVRRAPTAGQADAASEPAPEDQISYSALSLHALFEQQTRQL
Ga0070698_1016792421	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRKHRTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADL
Ga0070697_1006812221	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRKHRTRKVRRAPTAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRAD
Ga0070697_1015292971	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRKHRTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRAD
Ga0066905_1007291051	3300005713	Tropical Forest Soil	MAKRKHRARNVRRVAARQAKAASEAMPEDQISYSALSLHALFEQQTRQLLDRADLD
Ga0066905_1018738942	3300005713	Tropical Forest Soil	MAKRKQRARNVRRVPAAGQAKATSETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQ
Ga0066903_1031307431	3300005764	Tropical Forest Soil	MAKRKHRARKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNIL
Ga0066903_1063052771	3300005764	Tropical Forest Soil	MAKRKQASRKVRRVPAAGQANAAPEPASEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVA
Ga0066903_1070983522	3300005764	Tropical Forest Soil	MAKRKHRSRKVRRIPAEGQATPEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPC
Ga0066903_1080516481	3300005764	Tropical Forest Soil	MAKRKQGSRKVRRVPAAGQATREPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVA
Ga0075417_100398861	3300006049	Populus Rhizosphere	MAKRKPSTHSVRRDQRASRTAPEADSPPASEDQISYSSLSLHALFEQQARQLIDRADLDEEQKQNILLALS
Ga0126374_115440511	3300009792	Tropical Forest Soil	MAKRKRRTRKIRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLA
Ga0126380_107101432	3300010043	Tropical Forest Soil	MARRKHTSRKVTRAIAAAERPSAASAPDAAPEEQISYSALSLHELFEQQTRQMLDRTDLDEEQKQNIL
Ga0126384_106357012	3300010046	Tropical Forest Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQ
Ga0126384_108570541	3300010046	Tropical Forest Soil	MAKRKQRARRVPAAGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEE
Ga0126384_123041421	3300010046	Tropical Forest Soil	MAKRKQRARNVRRVAAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQ
Ga0126373_110703041	3300010048	Tropical Forest Soil	MAKRKRRTRKVWRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPC
Ga0126373_115165302	3300010048	Tropical Forest Soil	MAKRKHRSRKVRRIPAAGQANAAPEAAPEDQISYSALSLHALFEQQTRQLLDRADL
Ga0126370_115878921	3300010358	Tropical Forest Soil	MAKRKHRSRKVRRIPAAGQANAAPEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCCG
Ga0126376_104424541	3300010359	Tropical Forest Soil	MAKRKHRSRKVRRIPAAGQAYSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPC
Ga0126376_111102081	3300010359	Tropical Forest Soil	MAKRKRRTRKIRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMS
Ga0126378_103790842	3300010361	Tropical Forest Soil	LSHKPRSRKVRRAPAKEQAQPASEATPEEQISYSALSLHALFEQQARQLLDRTDLDEEQKQNILVPMTSPCCGSSAISVSAKLKR*
Ga0126377_102289413	3300010362	Tropical Forest Soil	LSHKPRSRKVRRAPAKEQASAKPASEGTPEDQISYSALSLHALFEQQARQLLDRTDLDEEQKQNILV
Ga0126377_117950161	3300010362	Tropical Forest Soil	MTVGETAEIRMAKRKQRARNVRRVPAAGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQK
Ga0126377_129531151	3300010362	Tropical Forest Soil	MTVGETAEIRMAKRKQRARNVRRVAAGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCCG
Ga0126379_137475391	3300010366	Tropical Forest Soil	MAKRKHRSRKVRRIPAEGQAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAM
Ga0126381_1012877522	3300010376	Tropical Forest Soil	MTVGEAAEIRMAKRKQRARNVRRVPAAGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMS
Ga0126381_1024050361	3300010376	Tropical Forest Soil	MAKRKQRARNVRRVAAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQL
Ga0126381_1047064651	3300010376	Tropical Forest Soil	MAKRKRRNRKVQRAPAAGQANAAPEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILV
Ga0126383_130113072	3300010398	Tropical Forest Soil	MAKRKRRTRKIRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVA
Ga0137363_103412831	3300012202	Vadose Zone Soil	MARRKQNSRGRRATKQGLPKPAAPAISPEDQISYSALSLHALFEQQARQLIDRADLDEEQKQKILLAMSCPCCGGGAI
Ga0126369_103216502	3300012971	Tropical Forest Soil	LSHKPRSRKVSRAPAKEQASAKPASEGTPEDQISYSALSLHALFEQQARQLLDRTDLDEEQKQNILVAMSCPCCGVGAMSFTAKIKR*
Ga0126369_111085511	3300012971	Tropical Forest Soil	MAKRKHRARKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLD
Ga0126369_128563191	3300012971	Tropical Forest Soil	MAKRKRRSRKVRRIPAAGQATSEAAPEDQISYSALSLHALFEQQTRQLL
Ga0182033_103012252	3300016319	Soil	MAKHKQRARSVRRVPAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNILVA
Ga0182033_112496581	3300016319	Soil	MAKRKPRTQKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCC
Ga0182032_103109081	3300016357	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCCG
Ga0182032_106146981	3300016357	Soil	MAKRKRRSRKVRRIPAAGQSSSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQ
Ga0182034_100739652	3300016371	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCCSAGAMSFTAKLKR
Ga0182034_110134051	3300016371	Soil	MAKRKQTTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVA
Ga0182040_102442571	3300016387	Soil	MAKHKQRARSVRRVPAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNILVAMSCPCCG
Ga0182038_103635602	3300016445	Soil	MAKRKQRARNVRRVAAAGQANAASEPPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAM
Ga0213879_101433142	3300021439	Bulk Soil	MAKRKTRKVRRAPAAGQADAASEPVPENQISYSALSLHALFEQQTRQLLDRGDLD
Ga0126371_118317732	3300021560	Tropical Forest Soil	MAKRKQASRKVRRVPAAGQANAAPEPASEDQISYSALSLHALFEQQTRQLLDRADLDEE
Ga0126371_136697471	3300021560	Tropical Forest Soil	MAKRKHRSRKVRRIPAEGQAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNIL
Ga0207693_114720412	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MARRKQNSRGRRATKRGLPKPAAPAISPEDQISYSALSLHALFEQQARQLIDRADLDEEQKQKILLAMSCPC
Ga0207646_112755301	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRKHRTRKVRRAPTAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLGEEQKQNILVAM
Ga0207665_105943463	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MAKRKHRTRKVRRAPTAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMRCPCCGGASGTFSFKLKPRA
Ga0209465_103692242	3300027874	Tropical Forest Soil	MAKRKQRARNVRRVAAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEE
Ga0209465_103720632	3300027874	Tropical Forest Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEE
Ga0209526_101158063	3300028047	Forest Soil	MAKRKHRTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDE
Ga0318516_101232311	3300031543	Soil	MAKRKPRTQKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMS
Ga0318534_107484551	3300031544	Soil	MAKRKQASRKVRRVPAAGQANAAPEPASEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCP
Ga0318541_100250611	3300031545	Soil	MAKRKQTTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPC
Ga0318538_100773432	3300031546	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCCGTGAMSFTAKLKR
Ga0318538_101227431	3300031546	Soil	MAKRKQTTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCP
Ga0318571_100144923	3300031549	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNI
Ga0318528_106073391	3300031561	Soil	MAKRKPRTQKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLD
Ga0318572_100085471	3300031681	Soil	MAKRKQTTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRA
Ga0318560_100023768	3300031682	Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQN
Ga0306917_101424841	3300031719	Soil	MAKRKRRSRKVRRIPAAGQSSSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQK
Ga0318493_103368451	3300031723	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCCGTGAMSFTA
Ga0306918_112567461	3300031744	Soil	MAKRKRRTRKVRRAPAAVQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNIL
Ga0318492_105890811	3300031748	Soil	MAKRKQASRKVRRVPAAGQANAAPEPASEDQISYSALSLHALFEQQTRQLLDRAD
Ga0318494_100067981	3300031751	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHALFEQQTWQLLDRADLDEEQKQNILVAMSCPCCSAGAMSFTAKLKR
Ga0318494_105651512	3300031751	Soil	MAKRKPRTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILIAMSCPC
Ga0318535_100564082	3300031764	Soil	MAKRKQASRKVRRVPAAGQANAAPEPASEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSC
Ga0318521_103292891	3300031770	Soil	MAKHKQRARSVRRVPAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNILVAMSC
Ga0318546_104579521	3300031771	Soil	MAKRKPRTQKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNIL
Ga0318543_102097211	3300031777	Soil	MAKRKRRTQKVRRAPAAGQANAAPEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVA
Ga0318566_100533573	3300031779	Soil	MAKRKQTTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCC
Ga0318566_106069501	3300031779	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHTLFEQQTRQLLDRADLDEEQKQNILVAMSCPCC
Ga0318508_10008646	3300031780	Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNILVAM
Ga0318508_12583271	3300031780	Soil	MAKRKHRIRKVRRAPAAGQADAASEPTPEDQISYSALSLHALFEQQTRQLL
Ga0318552_100760673	3300031782	Soil	MAKRKRRSRKVRRIPAAGQSSSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQ
Ga0318523_102672481	3300031798	Soil	LSHKPRSRKVRRAPAKEQVSAKPASEGTPEDQISYSALSLHALFEQQARQLLDRTDLDEEQKQNILVAMSC
Ga0318523_104711831	3300031798	Soil	MAKRKPRTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMS
Ga0318497_101422491	3300031805	Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQ
Ga0318497_102254581	3300031805	Soil	MAKRKRRSRKVRRIPAAGQSSSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNIL
Ga0318564_100554011	3300031831	Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDQEQ
Ga0318499_100028751	3300031832	Soil	MAKHKQRARSVRRVPAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNILVAMSCPC
Ga0318511_100666842	3300031845	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHALFEQQTWQLLDRADLDEEQKQN
Ga0318511_100830181	3300031845	Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNILVA
Ga0318511_103339391	3300031845	Soil	MAKRKRRTQKVRRAPAAGQANAAPEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCCG
Ga0318512_104114122	3300031846	Soil	MAKRKQTTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNI
Ga0318527_102627821	3300031859	Soil	MAKRKPRTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSC
Ga0318495_100557423	3300031860	Soil	MAKRKQTTRKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLD
Ga0306925_109636742	3300031890	Soil	MAKRKQASRKVRRVPAAGQANAAPEPASEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNI
Ga0318536_102514781	3300031893	Soil	MAKRKPRTQKVRRAPAAGQADAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQN
Ga0318522_102749362	3300031894	Soil	MAKRKRRSRKVRRIPAAGQSSSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDE
Ga0318551_101692241	3300031896	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHALFEQQTRQLLDRADLDE
Ga0310913_106275492	3300031945	Soil	MAKRKRRSRKVRRIPAAGQSSSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNI
Ga0318531_100908471	3300031981	Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNILVAMSC
Ga0318563_105640691	3300032009	Soil	MAKRKRRSRKVRRIPAGQSSSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDVEQKQNILVAMS
Ga0318507_102177362	3300032025	Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLRDRADLDE
Ga0310911_100509391	3300032035	Soil	MAKRKQRARNVRRVPAGGQAKAASETTPEDQISYSALSLHTLFEQQTRQLLDRADLDEEQKQNILVAMSCPCCSAGAMSF
Ga0318559_105288911	3300032039	Soil	MAKRKHRIRKVRRAPAAGQADAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPCCGTGAMSFTAKL
Ga0318510_100132403	3300032064	Soil	MAKHKQRARSVRRVPAAGQAKAASEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQ
Ga0318524_107505571	3300032067	Soil	MAKRKRRTQKVRRAPAAGQANAAPEPAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQN
Ga0306920_1042412092	3300032261	Soil	MAKRKHRSRKVRRIPAAGQATPEAAPEDQISYSALSLHALFEQQTRQLLDRADL
Ga0310914_117128251	3300033289	Soil	MAKRKRRSRKVRRIPAGQSSSEAAPEDQISYSALSLHALFEQQTRQLLDRADLDEEQK
Ga0318519_100820081	3300033290	Soil	MAKRKQASRKVRRVPAAGQANAAPEPASEDQISYSALSLHALFEQQTRQLLDRADLDEEQKQNILVAMSCPC
Ga0318519_101524811	3300033290	Soil	MAKRKQRARNVRRVPAAGQAKAASEPTPEDQISYSALSLHALFEQQTRQLLDRADLDEEQRQNILVAMS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079348

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences