Metagenome Family F079347

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079347
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	103 residues
Representative Sequence	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKSERRHPTPV
Number of Associated Samples	96
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.59 %
% of genes near scaffold ends (potentially truncated)	40.52 %
% of genes from short scaffolds (< 2000 bps)	68.97 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.897 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (9.483 % of family members)
Environment Ontology (ENVO)	Unclassified (52.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (75.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.99% β-sheet: 0.00% Coil/Unstructured: 33.01%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF02518	HATPase_c	18.97
PF00664	ABC_membrane	10.34
PF07690	MFS_1	6.90
PF03704	BTAD	3.45
PF06452	CBM9_1	3.45
PF00375	SDF	1.72
PF00361	Proton_antipo_M	0.86
PF01052	FliMN_C	0.86
PF00694	Aconitase_C	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	3.45
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	3.45

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.90 %
Unclassified	root	N/A	18.10 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	42.24 %
Unclassified	root	N/A	18.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	0.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	42.24 %
Unclassified	root	N/A	18.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	37.93 %
Unclassified	root	N/A	18.10 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	2.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	37.93 %
Unclassified	root	N/A	18.10 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	37.93 %
Unclassified	root	N/A	18.10 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	24.14 %
Unclassified	root	N/A	18.10 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	8.62 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	24.14 %
Unclassified	root	N/A	18.10 %
Gemmatimonas groenlandica	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	7.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.86 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	24.14 %
Unclassified	root	N/A	18.10 %
Gemmatimonas groenlandica	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	7.76 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.72 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	0.86 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_13513988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1113	Open in IMG/M
3300000559\|F14TC_103840942	Not Available	571	Open in IMG/M
3300000956\|JGI10216J12902_112462094	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300001431\|F14TB_103835681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	768	Open in IMG/M
3300004479\|Ga0062595_101876357	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300004480\|Ga0062592_100262198	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300005093\|Ga0062594_101508420	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005294\|Ga0065705_10167753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1712	Open in IMG/M
3300005328\|Ga0070676_10008938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5418	Open in IMG/M
3300005329\|Ga0070683_100363876	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300005330\|Ga0070690_100069894	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	2279	Open in IMG/M
3300005331\|Ga0070670_100049880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3598	Open in IMG/M
3300005334\|Ga0068869_101238931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	657	Open in IMG/M
3300005339\|Ga0070660_100215657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1559	Open in IMG/M
3300005339\|Ga0070660_101890676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	509	Open in IMG/M
3300005340\|Ga0070689_100018258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5164	Open in IMG/M
3300005345\|Ga0070692_10120096	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300005355\|Ga0070671_100119882	All Organisms → cellular organisms → Bacteria	2213	Open in IMG/M
3300005355\|Ga0070671_101097821	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005355\|Ga0070671_101101355	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005356\|Ga0070674_100099948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2111	Open in IMG/M
3300005439\|Ga0070711_100243994	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300005455\|Ga0070663_102074910	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	512	Open in IMG/M
3300005459\|Ga0068867_100045696	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3213	Open in IMG/M
3300005466\|Ga0070685_11287237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	558	Open in IMG/M
3300005468\|Ga0070707_101626907	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005544\|Ga0070686_101035376	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005563\|Ga0068855_100203248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2229	Open in IMG/M
3300005564\|Ga0070664_100015484	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6238	Open in IMG/M
3300005578\|Ga0068854_100638877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	913	Open in IMG/M
3300005614\|Ga0068856_102248074	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	554	Open in IMG/M
3300005616\|Ga0068852_100039607	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3969	Open in IMG/M
3300005616\|Ga0068852_100084815	All Organisms → cellular organisms → Bacteria	2820	Open in IMG/M
3300005718\|Ga0068866_10710010	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005764\|Ga0066903_100403695	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2250	Open in IMG/M
3300005834\|Ga0068851_10210921	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005841\|Ga0068863_101999417	Not Available	590	Open in IMG/M
3300005843\|Ga0068860_100172842	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2087	Open in IMG/M
3300006755\|Ga0079222_11225517	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300006806\|Ga0079220_11038218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	656	Open in IMG/M
3300006844\|Ga0075428_101388971	Not Available	737	Open in IMG/M
3300006845\|Ga0075421_100032771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6580	Open in IMG/M
3300006845\|Ga0075421_101160372	Not Available	864	Open in IMG/M
3300006969\|Ga0075419_10328955	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300007076\|Ga0075435_101909597	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	521	Open in IMG/M
3300009094\|Ga0111539_10558113	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300009147\|Ga0114129_10420920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1757	Open in IMG/M
3300009162\|Ga0075423_10046900	All Organisms → cellular organisms → Bacteria	4440	Open in IMG/M
3300009177\|Ga0105248_10988488	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300009177\|Ga0105248_13169083	Not Available	523	Open in IMG/M
3300009553\|Ga0105249_10169358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	2117	Open in IMG/M
3300010399\|Ga0134127_13051092	Not Available	546	Open in IMG/M
3300012469\|Ga0150984_112148783	Not Available	680	Open in IMG/M
3300012514\|Ga0157330_1015483	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300012896\|Ga0157303_10141228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	635	Open in IMG/M
3300012957\|Ga0164303_10137875	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300012958\|Ga0164299_10278927	All Organisms → cellular organisms → Bacteria → Acidobacteria	1015	Open in IMG/M
3300012961\|Ga0164302_10028282	All Organisms → cellular organisms → Bacteria	2541	Open in IMG/M
3300012986\|Ga0164304_10010108	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4135	Open in IMG/M
3300012987\|Ga0164307_11223384	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300012989\|Ga0164305_10194712	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300013297\|Ga0157378_10081639	All Organisms → cellular organisms → Bacteria	2922	Open in IMG/M
3300013307\|Ga0157372_12765429	Not Available	563	Open in IMG/M
3300013308\|Ga0157375_12000108	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	689	Open in IMG/M
3300014325\|Ga0163163_13225186	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	509	Open in IMG/M
3300014969\|Ga0157376_12597502	Not Available	546	Open in IMG/M
3300015371\|Ga0132258_10035101	All Organisms → cellular organisms → Bacteria	11274	Open in IMG/M
3300015371\|Ga0132258_10114109	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	6404	Open in IMG/M
3300015371\|Ga0132258_10284365	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4060	Open in IMG/M
3300015371\|Ga0132258_10888851	All Organisms → cellular organisms → Bacteria	2249	Open in IMG/M
3300015373\|Ga0132257_100099489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	3345	Open in IMG/M
3300015373\|Ga0132257_100898099	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300015374\|Ga0132255_100454116	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	1876	Open in IMG/M
3300021445\|Ga0182009_10030584	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2145	Open in IMG/M
3300025315\|Ga0207697_10004283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6845	Open in IMG/M
3300025321\|Ga0207656_10019254	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300025321\|Ga0207656_10149508	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1105	Open in IMG/M
3300025899\|Ga0207642_10117690	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300025899\|Ga0207642_10936193	Not Available	556	Open in IMG/M
3300025900\|Ga0207710_10725803	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	521	Open in IMG/M
3300025903\|Ga0207680_10297649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1124	Open in IMG/M
3300025907\|Ga0207645_10005366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	9314	Open in IMG/M
3300025915\|Ga0207693_10193694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	1599	Open in IMG/M
3300025919\|Ga0207657_10521919	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300025920\|Ga0207649_10055762	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300025920\|Ga0207649_10083593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	2073	Open in IMG/M
3300025931\|Ga0207644_10092699	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300025931\|Ga0207644_10565029	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300025931\|Ga0207644_11883205	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300025932\|Ga0207690_10029428	All Organisms → cellular organisms → Bacteria	3492	Open in IMG/M
3300025932\|Ga0207690_10505922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	977	Open in IMG/M
3300025933\|Ga0207706_10620714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	927	Open in IMG/M
3300025937\|Ga0207669_10401240	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300025949\|Ga0207667_11612471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	617	Open in IMG/M
3300025960\|Ga0207651_12107017	Not Available	506	Open in IMG/M
3300025986\|Ga0207658_10174848	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1772	Open in IMG/M
3300025986\|Ga0207658_11020398	Not Available	755	Open in IMG/M
3300026075\|Ga0207708_10079643	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300026075\|Ga0207708_10187924	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	1643	Open in IMG/M
3300026121\|Ga0207683_11809711	Not Available	560	Open in IMG/M
3300026142\|Ga0207698_10422007	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	1280	Open in IMG/M
3300027787\|Ga0209074_10545858	Not Available	510	Open in IMG/M
3300027907\|Ga0207428_10204656	Not Available	1485	Open in IMG/M
3300027909\|Ga0209382_10062030	All Organisms → cellular organisms → Bacteria	4430	Open in IMG/M
3300027909\|Ga0209382_11635860	Not Available	635	Open in IMG/M
3300028380\|Ga0268265_10107080	All Organisms → cellular organisms → Bacteria	2272	Open in IMG/M
3300031547\|Ga0310887_10172398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	1153	Open in IMG/M
3300031548\|Ga0307408_100001258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	19028	Open in IMG/M
3300031562\|Ga0310886_11072628	Not Available	519	Open in IMG/M
3300031938\|Ga0308175_100395962	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300031940\|Ga0310901_10279242	Not Available	695	Open in IMG/M
3300031944\|Ga0310884_10928004	Not Available	538	Open in IMG/M
3300031996\|Ga0308176_12526497	Not Available	547	Open in IMG/M
3300032002\|Ga0307416_100698880	Not Available	1103	Open in IMG/M
3300033412\|Ga0310810_10282357	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300033412\|Ga0310810_10488784	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas groenlandica	1229	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	64.66%
Environmental	Environmental	35.34%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	64.66%
Terrestrial	Environmental → Terrestrial	35.34%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.52%
Soil	Environmental → Terrestrial → Soil	35.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.28%
Roots	Host-Associated → Plants → Roots	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	22.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.38%
Loam	Environmental → Terrestrial → Soil → Loam	12.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.03%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	22.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.86%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0063.00002190	2162886013	Switchgrass Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELGWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV
F14TC_1038409421	3300000559	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKSERRHPTPV*
JGI10216J12902_1124620942	3300000956	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWQGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKSERRHPTPV*
F14TB_1038356812	3300001431	Soil	MRISPGEIIPVVIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDEGPAKPVAKSERRHPTPV*
Ga0062595_1018763572	3300004479	Soil	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREAGPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANAERRHPTPVRTPPSA*
Ga0062592_1002621982	3300004480	Soil	MGIDFHGIIPVIIFGGGAAVLGLSYVAVYLMGKNAGRKELEWRAAREVSPETDRLDRVEMAVESIALGVERLGEGQRYLLGSLSDERPVKAAPKSERRHPTPV*
Ga0062594_1015084202	3300005093	Soil	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPESDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVTPVAKAERRHPTPVRTPPSA*
Ga0065705_101677531	3300005294	Switchgrass Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV*
Ga0070676_100089383	3300005328	Miscanthus Rhizosphere	MRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTPV*
Ga0070683_1003638762	3300005329	Corn Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANGERRHPTPVRTPPSA*
Ga0070690_1000698942	3300005330	Switchgrass Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSGERPAKPVAKSERRHPTPV*
Ga0070670_1000498801	3300005331	Switchgrass Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANAERRHPTPVRTPPSA*
Ga0068869_1012389311	3300005334	Miscanthus Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRHAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGLRS
Ga0070660_1002156571	3300005339	Corn Rhizosphere	MRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV*
Ga0070660_1018906761	3300005339	Corn Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPESDRLDRVEAAVESIALGVERLGEGQRYLLGSLSD
Ga0070689_1000182583	3300005340	Switchgrass Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTPV*
Ga0070692_101200961	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV*
Ga0070671_1001198822	3300005355	Switchgrass Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVKPLANAERRNPTPIRTPPSA*
Ga0070671_1010978211	3300005355	Switchgrass Rhizosphere	IIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANAERRHPTPVRTPPSA*
Ga0070671_1011013552	3300005355	Switchgrass Rhizosphere	SYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSAKQPVTPIAKAERRHPTPVRTPPSA*
Ga0070674_1000999481	3300005356	Miscanthus Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVTPIAKAERRHPTPVRTPPSA*
Ga0070711_1002439942	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRISPGEIIPVIIFGAGSIVLGLSYVAVYLMGKNAARKELEWRGAREISPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSEERPVKPGAKAERRHPTPV*
Ga0070663_1020749101	3300005455	Corn Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMSKNAARKELQWRGAREVSPESDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVKPLANAERRNPTPIRTPPSA*
Ga0068867_1000456962	3300005459	Miscanthus Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGARELSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVTPIAKAERRHPTPVRTPPSA*
Ga0070685_112872371	3300005466	Switchgrass Rhizosphere	EGVMGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV*
Ga0070707_1016269071	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGARELSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVTPIAKAERRHPTPVRTPPSA*
Ga0070686_1010353761	3300005544	Switchgrass Rhizosphere	MRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPPANAERRHPTPVRTPPSA*
Ga0068855_1002032482	3300005563	Corn Rhizosphere	MRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTSV*
Ga0070664_1000154843	3300005564	Corn Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGLRSDKQPVKPLANAERRHPTPVRTPPSA*
Ga0068854_1006388771	3300005578	Corn Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPESDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANAERRHPTPVRTPPSA*
Ga0068856_1022480742	3300005614	Corn Rhizosphere	DVMRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV*
Ga0068852_1000396072	3300005616	Corn Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSFSDERPAKPVAKSERRHPTPV*
Ga0068852_1000848155	3300005616	Corn Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV*
Ga0068866_107100102	3300005718	Miscanthus Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSFSEGFRSDKQPVTPVAKAERRHPTPVRTPPSA*
Ga0066903_1004036953	3300005764	Tropical Forest Soil	MGFNVGGIIPLIIFCGGSVVLGLSYVAVYLMGKNAGRKELEWRAAREISPQSDRLDRVETAVESIALGVERLGEGQRYLLGSLSDERPVKAAPKSERRHPTPV*
Ga0068851_102109212	3300005834	Corn Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGLRSDKQPVKPLANAERRHPTPVRTPPSA*
Ga0068863_1019994172	3300005841	Switchgrass Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANT
Ga0068860_1001728424	3300005843	Switchgrass Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPESDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTPV*
Ga0079222_112255172	3300006755	Agricultural Soil	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANTERRHPTPVRTPPSA*
Ga0079220_110382181	3300006806	Agricultural Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAGRKELERYDPRGMSRPSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDER
Ga0075428_1013889712	3300006844	Populus Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQADRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKSERRHPTPV*
Ga0075421_1000327712	3300006845	Populus Rhizosphere	MGINVGGIIPIIIFGCGAVVLGLSYLAVYFMGKNAARKELGRQRVLSVGQQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKQERRHPTPV*
Ga0075421_1011603722	3300006845	Populus Rhizosphere	MRLNPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSGEVGPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSEERPVKPGAKSERRHPTPV*
Ga0075419_103289552	3300006969	Populus Rhizosphere	IPIIIFGCGAVVLGLSYLAVYFMGKNAARKELGRQRVLSVGQQSVRLDRVEAVVESIALGVERLGEGQRYLLGSLSDERPVKPAAKQERRHPTPV*
Ga0075435_1019095971	3300007076	Populus Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSGEVGPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSEERPVKPGAKSERRHPTPV*
Ga0111539_105581133	3300009094	Populus Rhizosphere	MGINVGGIIPIIIFGCGAVVLGLSYLAVYFMGKNAARKELGRQRVLSVGQQSDRLDRVEAAVESIALWVERLGEGQRYLLGSLSDERPVKPAAKQERRHPTPV*
Ga0114129_104209201	3300009147	Populus Rhizosphere	MRISPGEIIPVIIFGASSVVLGLNYVAVYLMGKNAARKELEWRGSGEVGPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSEERPVKPGAKSERRHPTPV*
Ga0075423_100469001	3300009162	Populus Rhizosphere	SPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSGEVGPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSEERPVKRGAKSERRHPTPV*
Ga0105248_109884882	3300009177	Switchgrass Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANAERRHPTPVRTPPS
Ga0105248_131690831	3300009177	Switchgrass Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGARERSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGS
Ga0105249_101693582	3300009553	Switchgrass Rhizosphere	MRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDE
Ga0134127_130510921	3300010399	Terrestrial Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKPERRHPTPV*
Ga0150984_1121487831	3300012469	Avena Fatua Rhizosphere	MDRAITHLRRIDVMRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQADRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKSERRHPTPV*
Ga0157330_10154832	3300012514	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVKAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHP
Ga0157303_101412281	3300012896	Soil	ANQLHLRRIDVMRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV*
Ga0164303_101378752	3300012957	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRFMLGSFSEGSRSDKQPVTPIAKAERRHPTPVRTPPSA*
Ga0164299_102789271	3300012958	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGPRSDKQPVTPIAKVERRHPTPVRTPPSA
Ga0164302_100282822	3300012961	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSAKQPVTPIAKAERRHPTPVR
Ga0164304_100101082	3300012986	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVTPIAKVERRHPTPVRTPPSA*
Ga0164307_112233842	3300012987	Soil	IIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVTPIAKAERRHPTPVRTPPSA*
Ga0164305_101947122	3300012989	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGYRTDKQPVTPIAKAERRHPTPVRTPPSA*
Ga0157378_100816392	3300013297	Miscanthus Rhizosphere	MRISPGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREVSPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPPANAERRHPTPVRTPPSA*
Ga0157372_127654291	3300013307	Corn Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPESDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV*
Ga0157375_120001082	3300013308	Miscanthus Rhizosphere	MGIDFHGIIPVIIFGGGAAVLGLSYVAVYLMGKNAGRKELEWRAAREVSPETDRLDRVEMAVESIALGVERLGEGQRYLLGSLSDERPV
Ga0163163_132251862	3300014325	Switchgrass Rhizosphere	VIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTPV*
Ga0157376_125975021	3300014969	Miscanthus Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREVSPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANAERRHPTPVRTPPSA*
Ga0132258_100351019	3300015371	Arabidopsis Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVGLQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLADERPVKPVAKAERRHPTPV*
Ga0132258_101141093	3300015371	Arabidopsis Rhizosphere	MGINVGEIIPVIIFGGSAVVLGLSYVAVYLIGKNTAREELERRDALGVVQQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLGTERPVKSVAKAERRHTTPV*
Ga0132258_102843653	3300015371	Arabidopsis Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELERRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKPERRHPTPV*
Ga0132258_108888512	3300015371	Arabidopsis Rhizosphere	MRISVGEVIPVIIFGSSAVVLGLSYVAVYLMGKNAARKELERRDVLGVGPQSDRLDRVETAVESIALGVERLGEGQRYLLGSLGTERPVKPVAKSERRHTTPV*
Ga0132257_1000994893	3300015373	Arabidopsis Rhizosphere	MGINVGEIIPVIIFGGSAVVLGLSYVAVYLIGKNTARKELERRDALGVVQQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLGTERPVKSVAKAERRHTTPV*
Ga0132257_1008980991	3300015373	Arabidopsis Rhizosphere	LPRIDVMRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVGLQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLADERPVKPVAKAERRHPTPV*
Ga0132255_1004541161	3300015374	Arabidopsis Rhizosphere	MGMNVGGIIPLIIFGCGAVVLGLSYVAVYFMGKNAARKELGRQRVLSVGQQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKQERRHPTPV*
Ga0182009_100305842	3300021445	Soil	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGLRSDKQPVKPLANAERRHPTPVRTPPSA
Ga0207697_100042834	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTPV
Ga0207656_100192543	3300025321	Corn Rhizosphere	MGIDFHGIIPVIIFGGGAAVLGLSYVAVYLMGKNAGRKELEWRAAREVSPETDRLDRVEMAVESIALGVERLGEGQRYLLGSLSDERPVKAAPKSERRHPTPV
Ga0207656_101495081	3300025321	Corn Rhizosphere	VLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV
Ga0207642_101176902	3300025899	Miscanthus Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSFSEGFRSDKQPVTPVAKAERRHPTPVRTPPSA
Ga0207642_109361931	3300025899	Miscanthus Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGARELSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVTPIAKAERRHPTP
Ga0207710_107258032	3300025900	Switchgrass Rhizosphere	IPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV
Ga0207680_102976492	3300025903	Switchgrass Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV
Ga0207645_100053667	3300025907	Miscanthus Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRP
Ga0207693_101936942	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRISPGEIIPVIIFGAGSIVLGLSYVAVYLMGKNAARKELEWRGAREISPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSEERPVKPGAKAERRHPTPV
Ga0207657_105219191	3300025919	Corn Rhizosphere	VMGIDFHGIIPVIIFGGGAAVLGLSYVAVYLMGKNAGRKELEWRAAREVSPETDRLDRVEMAVESIALGVERLGEGQRYLLGSLSDERPVKAAPKSERRHPTPV
Ga0207649_100557622	3300025920	Corn Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANAERRHPTPVRTPPSA
Ga0207649_100835932	3300025920	Corn Rhizosphere	MGIDFHGIIPVIIFGGGAAVLGLSYVAVYLMGKNAGRKELEWRAAREVSPETDRLDRVEMAVESIALGVERLGEGQRYLLGSLSDERPVKAAP
Ga0207644_100926992	3300025931	Switchgrass Rhizosphere	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVKPLANAERRNPTPIRTPPSA
Ga0207644_105650291	3300025931	Switchgrass Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGARELSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDRQPVTPIAKAERRHP
Ga0207644_118832052	3300025931	Switchgrass Rhizosphere	GLSYVAVYLMGKNAARKELEWRGARELSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVTPIAKAERRHPTPVRTPPSA
Ga0207690_100294281	3300025932	Corn Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTPV
Ga0207690_105059222	3300025932	Corn Rhizosphere	IFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV
Ga0207706_106207143	3300025933	Corn Rhizosphere	TLEEGVMGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV
Ga0207669_104012401	3300025937	Miscanthus Rhizosphere	ASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGSRSDKQPVTPIAKAERRHPTPVRTPPSA
Ga0207667_116124711	3300025949	Corn Rhizosphere	VIIFSVSSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV
Ga0207651_121070172	3300025960	Switchgrass Rhizosphere	PGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTPV
Ga0207658_101748482	3300025986	Switchgrass Rhizosphere	EIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHPTPV
Ga0207658_110203981	3300025986	Switchgrass Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV
Ga0207708_100796431	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGNLGEIIPLIIFGGGAVVLGLSYVAVYLMGKNAARKELQWRGAREVSPESDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDDRPAKPATKSERRHPTPV
Ga0207708_101879241	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRISPGEIIPVIIFGASSAVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPG
Ga0207683_118097111	3300026121	Miscanthus Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDER
Ga0207698_104220072	3300026142	Corn Rhizosphere	MRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPGAKSERRHP
Ga0209074_105458581	3300027787	Agricultural Soil	MGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSD
Ga0207428_102046562	3300027907	Populus Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQADRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKSERRHPTPV
Ga0209382_100620302	3300027909	Populus Rhizosphere	MGINVGGIIPIIIFGCGAVVLGLSYLAVYFMGKNAARKELGRQRVLSVGQQSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPAAKQERRHPTPV
Ga0209382_116358601	3300027909	Populus Rhizosphere	MRLNPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSGEVGPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSEERPVKPGAKSERRHPTPV
Ga0268265_101070802	3300028380	Switchgrass Rhizosphere	MRISPGEIIPVIIFSASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVAKSERRHPTPV
Ga0310887_101723982	3300031547	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPVAKSERRHPTPV
Ga0307408_10000125810	3300031548	Rhizosphere	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQADRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKHAAKSERRHPTPV
Ga0310886_110726281	3300031562	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPEKPGAKSERRHPTPV
Ga0308175_1003959621	3300031938	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAGRKELERYDPRGMSRPSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKAPPKPERRHP
Ga0310901_102792422	3300031940	Soil	PVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPVAKSERRHPTPV
Ga0310884_109280041	3300031944	Soil	SPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKPVAKSERRHPTPV
Ga0308176_125264971	3300031996	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAGRKELERYDPRGMSRPSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPVKAPPKPERRHPTPV
Ga0307416_1006988801	3300032002	Rhizosphere	IIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGAREVSPQADRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPMKHAAKSERRHPTPV
Ga0310810_102823571	3300033412	Soil	VTLEEGVMGNLGEIIPVIIFGGGAVVLGLSYVAVYLMGKNAGRKELQWRDAREASPQTDRLDRVEAAVESIALGVERLGEGQRYMLGSFSEGFRSDKQPVKPLANAERRHPTPVRTPPSA
Ga0310810_104887841	3300033412	Soil	MRISPGEIIPVIIFGASSVVLGLSYVAVYLMGKNAARKELEWRGSREVSPSSDRLDRVEAAVESIALGVERLGEGQRYLLGSLSDERPAKPVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079347

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences