NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F079083

Metagenome Family F079083

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F079083
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 62 residues
Representative Sequence MLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTNDILKRASRVH
Number of Associated Samples 87
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 37.07 %
% of genes near scaffold ends (potentially truncated) 20.69 %
% of genes from short scaffolds (< 2000 bps) 77.59 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (77.586 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(16.379 % of family members)
Environment Ontology (ENVO) Unclassified
(24.138 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.034 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 54.65%    β-sheet: 0.00%    Coil/Unstructured: 45.35%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF13620CarboxypepD_reg 5.17
PF08450SGL 5.17
PF12704MacB_PCD 2.59
PF03551PadR 1.72
PF08281Sigma70_r4_2 1.72
PF02801Ketoacyl-synt_C 1.72
PF13360PQQ_2 1.72
PF13650Asp_protease_2 1.72
PF02687FtsX 1.72
PF07366SnoaL 1.72
PF13561adh_short_C2 0.86
PF04199Cyclase 0.86
PF14450FtsA 0.86
PF00850Hist_deacetyl 0.86
PF12695Abhydrolase_5 0.86
PF11959DUF3473 0.86
PF02655ATP-grasp_3 0.86
PF13180PDZ_2 0.86
PF02201SWIB 0.86
PF00535Glycos_transf_2 0.86
PF13570PQQ_3 0.86
PF03544TonB_C 0.86
PF12796Ank_2 0.86
PF00486Trans_reg_C 0.86
PF01435Peptidase_M48 0.86
PF08669GCV_T_C 0.86
PF05163DinB 0.86
PF04389Peptidase_M28 0.86
PF14742GDE_N_bis 0.86
PF01161PBP 0.86
PF07995GSDH 0.86
PF01479S4 0.86
PF00158Sigma54_activat 0.86
PF05195AMP_N 0.86
PF02735Ku 0.86
PF12681Glyoxalase_2 0.86
PF00484Pro_CA 0.86
PF02021UPF0102 0.86
PF01968Hydantoinase_A 0.86
PF00941FAD_binding_5 0.86
PF15902Sortilin-Vps10 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 5.17
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 5.17
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.72
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.72
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.72
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.72
COG0006Xaa-Pro aminopeptidaseAmino acid transport and metabolism [E] 0.86
COG0288Carbonic anhydraseInorganic ion transport and metabolism [P] 0.86
COG0792Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 familyReplication, recombination and repair [L] 0.86
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 0.86
COG1273Non-homologous end joining protein Ku, dsDNA break repairReplication, recombination and repair [L] 0.86
COG1878Kynurenine formamidaseAmino acid transport and metabolism [E] 0.86
COG1881Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) familyGeneral function prediction only [R] 0.86
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 0.86
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.86
COG5531DNA-binding SWIB/MDM2 domainChromatin structure and dynamics [B] 0.86

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.59 %
UnclassifiedrootN/A22.41 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004633|Ga0066395_10041626All Organisms → cellular organisms → Bacteria1985Open in IMG/M
3300005166|Ga0066674_10009084All Organisms → cellular organisms → Bacteria4056Open in IMG/M
3300005171|Ga0066677_10076810All Organisms → cellular organisms → Bacteria1728Open in IMG/M
3300005174|Ga0066680_10262959All Organisms → cellular organisms → Bacteria → Acidobacteria1098Open in IMG/M
3300005178|Ga0066688_10108482All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300005179|Ga0066684_10062622All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2175Open in IMG/M
3300005186|Ga0066676_10950573All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium574Open in IMG/M
3300005294|Ga0065705_10300939All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1037Open in IMG/M
3300005332|Ga0066388_100036396All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4763Open in IMG/M
3300005332|Ga0066388_101773156All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300005332|Ga0066388_104156458Not Available738Open in IMG/M
3300005332|Ga0066388_108058201All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005364|Ga0070673_102257000All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300005440|Ga0070705_101278027Not Available607Open in IMG/M
3300005445|Ga0070708_100795756All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium889Open in IMG/M
3300005450|Ga0066682_10372795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium917Open in IMG/M
3300005471|Ga0070698_100498803All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1155Open in IMG/M
3300005518|Ga0070699_100111438All Organisms → cellular organisms → Bacteria2403Open in IMG/M
3300005518|Ga0070699_101051315Not Available747Open in IMG/M
3300005529|Ga0070741_10115105All Organisms → cellular organisms → Bacteria2798Open in IMG/M
3300005529|Ga0070741_10141097All Organisms → cellular organisms → Bacteria2442Open in IMG/M
3300005546|Ga0070696_100315240All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1202Open in IMG/M
3300005546|Ga0070696_101276772Not Available623Open in IMG/M
3300005553|Ga0066695_10846076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300005555|Ga0066692_10606585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300005556|Ga0066707_10858476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300005558|Ga0066698_10257357Not Available1205Open in IMG/M
3300005558|Ga0066698_10278287All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1158Open in IMG/M
3300005558|Ga0066698_10615404All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300005561|Ga0066699_10020096All Organisms → cellular organisms → Bacteria3643Open in IMG/M
3300005561|Ga0066699_10825854All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300005764|Ga0066903_100430527All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60762191Open in IMG/M
3300005764|Ga0066903_103795586All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium812Open in IMG/M
3300005764|Ga0066903_103801277Not Available811Open in IMG/M
3300006031|Ga0066651_10095992All Organisms → cellular organisms → Bacteria → Proteobacteria1485Open in IMG/M
3300006046|Ga0066652_100017226All Organisms → cellular organisms → Bacteria4867Open in IMG/M
3300006173|Ga0070716_101314770All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium585Open in IMG/M
3300006237|Ga0097621_100996839All Organisms → cellular organisms → Bacteria → Acidobacteria783Open in IMG/M
3300006358|Ga0068871_101000809All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300006804|Ga0079221_10753299Not Available689Open in IMG/M
3300006806|Ga0079220_11312784All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium607Open in IMG/M
3300006844|Ga0075428_100838737All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium976Open in IMG/M
3300006852|Ga0075433_10352563All Organisms → cellular organisms → Bacteria → Acidobacteria1300Open in IMG/M
3300006871|Ga0075434_101981514All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium588Open in IMG/M
3300006903|Ga0075426_10811256All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium704Open in IMG/M
3300007255|Ga0099791_10513969All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300009090|Ga0099827_10000285All Organisms → cellular organisms → Bacteria21562Open in IMG/M
3300009090|Ga0099827_10000688All Organisms → cellular organisms → Bacteria16045Open in IMG/M
3300009090|Ga0099827_10105765Not Available2244Open in IMG/M
3300009094|Ga0111539_11594750Not Available757Open in IMG/M
3300009100|Ga0075418_10904821Not Available954Open in IMG/M
3300009137|Ga0066709_100684230All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1473Open in IMG/M
3300009137|Ga0066709_102035033Not Available795Open in IMG/M
3300009177|Ga0105248_12742958All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300010046|Ga0126384_11476692All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium636Open in IMG/M
3300010046|Ga0126384_11634333Not Available607Open in IMG/M
3300010047|Ga0126382_11709184All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300010047|Ga0126382_12196898All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300010366|Ga0126379_11151300All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300010366|Ga0126379_12282266All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium642Open in IMG/M
3300010397|Ga0134124_12755817Not Available535Open in IMG/M
3300010400|Ga0134122_10668196All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → unclassified Moraxellaceae → Moraxellaceae bacterium971Open in IMG/M
3300010401|Ga0134121_10652893All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium991Open in IMG/M
3300010401|Ga0134121_11685209Not Available657Open in IMG/M
3300010403|Ga0134123_12888170Not Available549Open in IMG/M
3300012096|Ga0137389_11001072Not Available716Open in IMG/M
3300012198|Ga0137364_11030473All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium621Open in IMG/M
3300012200|Ga0137382_10593701Not Available791Open in IMG/M
3300012203|Ga0137399_10047900All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis3084Open in IMG/M
3300012208|Ga0137376_10008634All Organisms → cellular organisms → Bacteria → Acidobacteria7109Open in IMG/M
3300012351|Ga0137386_10492415All Organisms → cellular organisms → Bacteria883Open in IMG/M
3300012925|Ga0137419_10754062All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium793Open in IMG/M
3300012960|Ga0164301_11814051Not Available513Open in IMG/M
3300012961|Ga0164302_11688065Not Available530Open in IMG/M
3300012984|Ga0164309_11248514Not Available626Open in IMG/M
3300012989|Ga0164305_11684491Not Available569Open in IMG/M
3300015241|Ga0137418_10045716All Organisms → cellular organisms → Bacteria4031Open in IMG/M
3300015371|Ga0132258_10745750All Organisms → cellular organisms → Bacteria2466Open in IMG/M
3300018000|Ga0184604_10000657All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea4113Open in IMG/M
3300018027|Ga0184605_10008886Not Available3774Open in IMG/M
3300018027|Ga0184605_10169469Not Available986Open in IMG/M
3300018431|Ga0066655_11192588All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300018433|Ga0066667_10000807All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium11115Open in IMG/M
3300018433|Ga0066667_11361604All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300018433|Ga0066667_11442374All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium606Open in IMG/M
3300018482|Ga0066669_10699271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium893Open in IMG/M
3300018482|Ga0066669_10859410All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium808Open in IMG/M
3300021178|Ga0210408_10041173All Organisms → cellular organisms → Bacteria → Acidobacteria3628Open in IMG/M
3300021178|Ga0210408_11411000Not Available524Open in IMG/M
3300021432|Ga0210384_10172718All Organisms → cellular organisms → Bacteria1942Open in IMG/M
3300025927|Ga0207687_11103093Not Available681Open in IMG/M
3300025939|Ga0207665_11501603All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300026310|Ga0209239_1342563All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300026331|Ga0209267_1078979All Organisms → cellular organisms → Bacteria1426Open in IMG/M
3300026542|Ga0209805_1043449All Organisms → cellular organisms → Bacteria2264Open in IMG/M
3300026550|Ga0209474_10001161All Organisms → cellular organisms → Bacteria26539Open in IMG/M
3300027874|Ga0209465_10013817All Organisms → cellular organisms → Bacteria → Acidobacteria3639Open in IMG/M
3300027882|Ga0209590_10015948All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis3672Open in IMG/M
3300027882|Ga0209590_10059940Not Available2154Open in IMG/M
3300027882|Ga0209590_10136409All Organisms → cellular organisms → Bacteria → Acidobacteria1508Open in IMG/M
3300028799|Ga0307284_10088757All Organisms → cellular organisms → Bacteria1143Open in IMG/M
3300031720|Ga0307469_10053366All Organisms → cellular organisms → Bacteria2557Open in IMG/M
3300031720|Ga0307469_11029435All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_14770Open in IMG/M
3300031740|Ga0307468_101330406All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium656Open in IMG/M
3300031820|Ga0307473_10079581All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1675Open in IMG/M
3300031820|Ga0307473_10089105All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1607Open in IMG/M
3300031890|Ga0306925_11522548All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300031910|Ga0306923_11479357All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium712Open in IMG/M
3300031954|Ga0306926_10541683All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1427Open in IMG/M
3300032035|Ga0310911_10499287All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium705Open in IMG/M
3300032076|Ga0306924_12116519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300032180|Ga0307471_100491755All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300032180|Ga0307471_102432275All Organisms → cellular organisms → Bacteria → Acidobacteria662Open in IMG/M
3300032180|Ga0307471_104251470All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300032205|Ga0307472_100949981All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300033412|Ga0310810_10843163All Organisms → cellular organisms → Bacteria818Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.38%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil12.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.76%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.17%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.17%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.45%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.59%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.72%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0066395_1004162623300004633Tropical Forest SoilMFIDPVAFKALQNTLSDIEALISKTTPLPENRTPRCLELLQTAKALMSDMMKRASRVQ*
Ga0066674_1000908423300005166SoilMLIDPIPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTKDILKRASRVQ*
Ga0066677_1007681013300005171SoilMFVDPVAIKALQNILAEIQMLMSTTSAPPQDRAARCLELLETATALTND
Ga0066680_1026295913300005174SoilMGIAACRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTNDILKRASRVH*
Ga0066688_1010848223300005178SoilMLIDPIPIKALQNMLAEIETLISTTTPLPGNRTARCLELLQTAKALTNDILKRASSVH*
Ga0066684_1006262223300005179SoilMLIDPVPIKAIQNMLVEIESLISTTTPLPENRTARCLELLQAAKAVTNDILKRASRVH*
Ga0066676_1095057313300005186SoilMLIVPVPIIAIQNMLVEIESLISTTTPLPENRTARCLELLQTAKAVTNDILKRASRVH*
Ga0065705_1030093913300005294Switchgrass RhizosphereMFVDPVAVKALQNMLGEIETLISTATPLPENRTARCLELLETAKALTNDMIK
Ga0066388_10003639633300005332Tropical Forest SoilMLIDPIPIKALQNMLAEIETLISTTTPLPENRTTQCLELLQAAKALTNDILKRASRVH*
Ga0066388_10177315623300005332Tropical Forest SoilMLVDPVSIKALQNMLGEMEKLLATPAPPSDDRTARCLELVQTAKALMNDMVKRASRVQ*
Ga0066388_10415645823300005332Tropical Forest SoilMLVDPVSIKALQNMLGEMEKLLATPAPPSEDRTARCLELVQTAKALMNDMVKRASRVQ*
Ga0066388_10805820123300005332Tropical Forest SoilMFVDPVAIKALENMLGEIETLISTTTPLPENRTARCLELLETARALMNDIRKRASRIQ*
Ga0070673_10225700013300005364Switchgrass RhizosphereMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTSDILKRASRVH*
Ga0070705_10127802713300005440Corn, Switchgrass And Miscanthus RhizosphereMFVDPVAMKALQNILAEIQTLISTMSASPQDRTVRCLELLETARALTNDMMKRGSRIQ*
Ga0070708_10079575613300005445Corn, Switchgrass And Miscanthus RhizosphereHHRCDRIHSGLMEITDCRSVGRMLIDPIPIKALQNMLAEIETLISTTTPLPENRTTRCLELLQTAKALTNDILKRASRVH*
Ga0066682_1037279523300005450SoilLREIVDCHSVGHMLIDPVPIKALQNMLDEIETLISTTTPLPENRTARCLELLQAAKALTNDILKRASRVH*
Ga0070698_10049880333300005471Corn, Switchgrass And Miscanthus RhizosphereMLIDPIPIKALQNILAEIETLISTTTPLPENMTARCLELLQTARALTNDILKRASRVH*
Ga0070699_10011143823300005518Corn, Switchgrass And Miscanthus RhizosphereMLIDPVPIKAIQNMLVEIESLISTTTPLPENRTARCLELLQAAKAVTSDILKRASRVQ*
Ga0070699_10105131513300005518Corn, Switchgrass And Miscanthus RhizosphereMEITDCRSVGRMLIDPIPIKALQNMLAEIETLISTTTPLPENRTTRCLELLQTAKALTNDILKRASRVH*
Ga0070741_1011510553300005529Surface SoilMYVDPVAIKALQNVLAEIETLISTTSPLPENRTARCLELLQTARALMADMTKRAARIQ*
Ga0070741_1014109733300005529Surface SoilMFVDPVAIRALQNMLGEIQALISTATPLPDNRTAQCIDLLEAARALTDDMIRRASRVQ*
Ga0070696_10031524013300005546Corn, Switchgrass And Miscanthus RhizosphereMQRVRHKVSETCVAYGLMSIADCRTVGRMLIDPIPIKALQNMLAEIENLISTTTPLPENRTARCLELLQAAKALTSDILKRASRVH*
Ga0070696_10127677223300005546Corn, Switchgrass And Miscanthus RhizosphereLKPALGDGLMKIADCRSVGRMLIDPVPIKALQNMLAEVETLISTTTPLPENRTTRCLELLQTAKALTNDILKRASRVH*
Ga0066695_1084607613300005553SoilMEIADCHSLRRMLIDPVPIKAIQNMLVEIESLISTTTPLPENRTARCLELIQAAKAVTNDILKRASRVH*
Ga0066692_1060658523300005555SoilMEIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQEAKALTNDILKRASRVH*
Ga0066707_1085847623300005556SoilMLIDPIPIKALQNMLAEIETLISTTTPLPENRTVRCLELLQAAKALTNDILKRASRVH*
Ga0066698_1025735723300005558SoilMEIADCRSVGRMLIDPVPIKALQNMLVEIETLISTTTPLPENRTTRCIELLQAAKALTNDILKRASRVH*
Ga0066698_1027828733300005558SoilMLIDPVPIKAIQNMLVEIESLISTTTPLPENRTARCLELIQAAKAVTNDILKRASRVH*
Ga0066698_1061540423300005558SoilMLIDPVPIKAIQNMLVEIELLISTTTPLPENRTARCLELLQAAKAVTNDILKRASRVH*
Ga0066699_1002009623300005561SoilMFVDPVAIKALQNILAEIQMLMSTTSAPPQDRAARCLELLETATALTNDMMKRGSRIQ*
Ga0066699_1082585423300005561SoilMLIDPVPIKALQNMLDEIETLISTTTPLPENRTARCLELLQAAKALTNDILKRASRVH*
Ga0066903_10043052733300005764Tropical Forest SoilMFVDPVAIKALQNILGEIETLISTTTPLPENRTARCIELLQTARALTNDMMKRGSRIQ*
Ga0066903_10379558623300005764Tropical Forest SoilMFVDPVAIKALQNMLGEIETLISTTTPLPENRTARCIDLLAAAKALTNDMVKRANRVQ*
Ga0066903_10380127723300005764Tropical Forest SoilMFIDPVAIKALQNVLAEIETLISTTSPLPENRTARCVELLQTAKALTNDMMKRGSRIQ*
Ga0066651_1009599223300006031SoilLVGGLSKTGDCRSVERMFVDPVAIKALQNMLGEIETLISTTAPLPENRTARCIELLEAAKALTNDMTKRPGRVQ*
Ga0066652_10001722633300006046SoilMFVDPVAIKALQNMLGEIETLISTTAPLPENRTARCIELLEAAKALTNDMTKRPGRVQ*
Ga0070716_10131477013300006173Corn, Switchgrass And Miscanthus RhizosphereMEIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTSDILKRASRVH*
Ga0097621_10099683913300006237Miscanthus RhizosphereMEIADCRSVGRMLIDPVPIKALQNMLAEVETLISTTTPLPENRTARCLELLQAAKALTSDILKRASRVH*
Ga0068871_10100080923300006358Miscanthus RhizosphereMEIADCRSVGRMLIDPMPIKALQNMLAEVETLISTTTPLPENRTARCLELLQAAKALTSDILKRASRVH*
Ga0079221_1075329923300006804Agricultural SoilMFVDPIALKALQNMLAEIETMISTASASPDDRTARCLELIQAARAITNDMVKRGNRIH*
Ga0079220_1131278413300006806Agricultural SoilMFVDPVAIKALQNILAEIETMISATPLPDSRTARCMDLLATAKALTRDMIKRASRVQ*
Ga0075428_10083873713300006844Populus RhizosphereMPPIAGNVQRMFVDPVAIKALHMLGEIETLISTTTPLPDNRTARCMELLEVAKALTNELM
Ga0075433_1035256323300006852Populus RhizosphereMFVDPVAIKALENMLGEIETLISTTTPLPENRTARCLELLEAAKALMNDIRKRASRIQ*
Ga0075434_10198151423300006871Populus RhizosphereMFVNPVAIKALQNMLGELETLISTTTPLPENRTARCIELLATARALTNDMVKRGSRVH*
Ga0075426_1081125613300006903Populus RhizosphereMLIDPVPIKALRNMLAEIETLISTTTPLPENRTDRCLELLQTAKALTDDILKRANRVH*
Ga0099791_1051396933300007255Vadose Zone SoilADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQEAKALTNDILKRASRVH*
Ga0099827_1000028543300009090Vadose Zone SoilLFGGLMEIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTNDILKRASRVH*
Ga0099827_10000688113300009090Vadose Zone SoilMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTNDILKRASRVH*
Ga0099827_1010576523300009090Vadose Zone SoilMFVDPVAIKALQNILAELQTLISTTSASPQDRTARCLELLETATALTNDMMKRGSRIQ*
Ga0111539_1159475023300009094Populus RhizosphereMACEKPPAAVVRRMFVDPVAIKALENMLGEIETLISTTTPLPENRTARCLELLEAAKALMNDIRKRASRIQ*
Ga0075418_1090482113300009100Populus RhizosphereMAREKPPAAVVRRMFVDPVAIKALENMLGEIETLISTTTPLPENRTARCLELLEAAKALMNDIRKRASRIQ*
Ga0066709_10068423033300009137Grasslands SoilMLIDPVPIIAIQNMLVEIESLISTTTPLPENRTARCLELLQAAKAITNDILKRASRVH*
Ga0066709_10203503323300009137Grasslands SoilMVEGLMETVECRSVGRMLIDPVPIKALQNMLVEIESLISTTTLPENRTVRCLELLQAAKTLTNDILKRASRIH*
Ga0105248_1274295813300009177Switchgrass RhizosphereMLIDPVPIKALQNMLAEVETLISTTTPLPENRTTRCLELLQAAKALTSDILKRASRVH*
Ga0126384_1147669223300010046Tropical Forest SoilMFVDPVAVKALQNMLGEIETLISTTAPLPENRTARCMELLEAAKALTNDMMKRGIRVQ*
Ga0126384_1163433313300010046Tropical Forest SoilMVIDPIPIKALQNMLTEIEMLISTPRPPTEKTVAQCLELVRTAKALTTDILKHASRIH*
Ga0126382_1170918423300010047Tropical Forest SoilMFIDPVSIKALQNMLAEIETLISTSSPLPESKRTRCLELLQTARALMSDMMKRASRIQ*
Ga0126382_1219689823300010047Tropical Forest SoilMFVDPVAIKALENTLGEIERLISTTTPLPENRTARCLELLETARALMNDIRKRASRIQ*
Ga0126379_1115130023300010366Tropical Forest SoilMFVDPVAVKALHNMLVEIETLLSTTTPLPENRTARCMELIAAAKALMNDMMKRGSRVQ*
Ga0126379_1228226613300010366Tropical Forest SoilMFIDPVAIKALQNVLAEIETLISTTSPLPENRTARSVELLQTAKALTNDMMKRGSRIQ*
Ga0134124_1275581713300010397Terrestrial SoilMEIADCRSVGRMLIDPVPIKALQNMLAEVETLISTTTPLPENRTTRCLELLQTAKALTNDILKRASRVH*
Ga0134122_1066819633300010400Terrestrial SoilMFVDPVAMKALQNILAEIQTLISTMSASPQDRTARCLELLETAKALTNDMMKRGSRIQ*
Ga0134121_1065289323300010401Terrestrial SoilMLIDPVPIKALQNMLAEVETLISTTTPLPENRTARCLELLQAAKALTSDILKRASRVH*
Ga0134121_1168520923300010401Terrestrial SoilMLIDPVPIKAIQNMLAEIESFFSTTTPPPEKRIARCLELLQAAKAITNDILTRASRVH*
Ga0134123_1288817023300010403Terrestrial SoilWKTVACRSVDRMFVDPVAMKALQNILAEIQTLISTMSASPQDRTARCLELLETATALTNDMMKRASRIQ*
Ga0137389_1100107213300012096Vadose Zone SoilLFGGLMEIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTLLPENRTARCLELLQAAKALTNDILKRASRVH*
Ga0137364_1103047313300012198Vadose Zone SoilIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTDDILKRASRAH*
Ga0137382_1059370123300012200Vadose Zone SoilMFVDPVAMKALQNILAEIQTLISTTSASPQDRTARCLELLETATALTNDMMKRGSTIQ*
Ga0137399_1004790023300012203Vadose Zone SoilLFGGLMEIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQEAKALTNDILKRASRVH*
Ga0137376_10008634123300012208Vadose Zone SoilMFVDPVAMKALQNILAEIQTLISTTSASPQDRTARCLELLETATALTNDMMKRGSRIQ*
Ga0137386_1049241523300012351Vadose Zone SoilMKRALVGGLMEIADYRNVGCMLIDPIPIKALQNMLAEIEALISTTTSLPENRTARCLELLQTAKALTNDILKRASRVH*
Ga0137419_1075406213300012925Vadose Zone SoilMLIDPVPIKAIQNMLVEIESLISTTTPLPENRTARCIELLQAAKAVTSDILKRASRVQ*
Ga0164301_1181405113300012960SoilIDPVPIKAIQNMLAEIESLLSSTTPHPEKRIARCLELLQAAKAITNDILTRASRVH*
Ga0164302_1168806523300012961SoilVPIKAIQNMLAEIESLLSSTTPHPEKRIARCLELLQAAKAITNDILTRASRVH*
Ga0164309_1124851423300012984SoilLKPALDEPAAVGSLMEIADCRSVRRMLIDLVPIKAIQNMLAEIESLLSSTTPHPEKRIARCLELLQAAKAITNDILTRASRVH*
Ga0164305_1168449133300012989SoilQNMLAEIESLLSSTTPHPEKRIARCLELLQAAKAITNDILTRASRVH*
Ga0137418_1004571623300015241Vadose Zone SoilLFGGLMEIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQETKALTNDILKRASRVH*
Ga0132258_1074575053300015371Arabidopsis RhizosphereMLIDPVPIKAIQNMLAEIESLLSSTTPHPEKRIARCLELLQAAKAITNDILTRASRVH*
Ga0184604_1000065723300018000Groundwater SedimentMEIADYRNVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCVELLQTAKALTNDILKRASRVH
Ga0184605_1000888633300018027Groundwater SedimentMFVDPVAIKALQNMLGEIETLISSTTPLPENRTARCIELLAAAKALTNDMMKRASRVQ
Ga0184605_1016946923300018027Groundwater SedimentVPIKALQNMLAEIETLISTTTPLPENRTARCVELLQTAKALTNDILKRASRVH
Ga0066655_1119258823300018431Grasslands SoilMEIADCRSVGRMLIDPVPIKALHNMLAEIETLISTTTPLPENRTARCLELLQAAKALTKDILKRASRVQ
Ga0066667_10000807123300018433Grasslands SoilMLIDPIPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTKDILKRASRVQ
Ga0066667_1136160413300018433Grasslands SoilMLIDPVPIIAIQNMLVEIESLISTTTPLPENRTARCLELLQAAKAVTNDILKRASRVH
Ga0066667_1144237423300018433Grasslands SoilMLIDPIPIKALQNMLAEIETLISTTTPLPGNRTARCLELLQTAKALTNDILKRAS
Ga0066669_1069927133300018482Grasslands SoilMFVDPVSMKALQNMLAEIETLISTPSPPLENRTAHCLELLQAARALLNDMVKRASRIQ
Ga0066669_1085941013300018482Grasslands SoilMLIDPVPIIAIQNMLVEIESLISTTTPLPENRTARCLELLQAAKAITNDILKRASRVH
Ga0210408_1004117333300021178SoilMGIADYRNVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQTAKALTNDILKRASRVH
Ga0210408_1141100023300021178SoilMFVDRVAIKALQNMITDVETLISTTTPLPENRTGRSLELLKAAKVLINDMMKRASRVQ
Ga0210384_1017271813300021432SoilMGIADYRNVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQTAKALTNDILKRAS
Ga0207687_1110309323300025927Miscanthus RhizosphereMEIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTSDILKRASRVH
Ga0207665_1150160313300025939Corn, Switchgrass And Miscanthus RhizosphereMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTSDILKRASRV
Ga0209239_134256313300026310Grasslands SoilMLIDPIPIKALQNMLAEIETLISTTTPLPGNRTARCLELLQTAKALTNDILK
Ga0209267_107897923300026331SoilMLIDPIPIKALQNMLAEIETLISTTTPLPGNRTARCLELLQTAKALTNDILKRASSVH
Ga0209805_104344923300026542SoilMFVDPVAIKALQNILAEIQMLMSTTSAPPQDRAARCLELLETATALTNDMMKRGSRIQ
Ga0209474_10001161203300026550SoilMLIDPVPIKAIQNMLVEIESLISTTTPLPENRTARCLELLQAAKAVTNDILKRASRVH
Ga0209465_1001381723300027874Tropical Forest SoilMFIDPVAFKALQNTLSDIEALISKTTPLPENRTPRCLELLQTAKALMSDMMKRASRVQ
Ga0209590_1001594843300027882Vadose Zone SoilMEIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTLLPENRTARCLELLQAAKALTNDILKRASRVH
Ga0209590_1005994023300027882Vadose Zone SoilMFVDPVAIKALQNILAELQTLISTTSASPQDRTARCLELLETATALTNDMMKRGSRIQ
Ga0209590_1013640913300027882Vadose Zone SoilMGIADCRSVGRMLIDPVPIKALQNMLAEIETLISTTTPLPENRTARCLELLQAAKALTNDILKRASRVH
Ga0307284_1008875723300028799SoilMFVDPVAMKALQNILAEIQALISTTSASPQDRTARCLELLETATALTNDMMKRGSRIQ
Ga0307469_1005336613300031720Hardwood Forest SoilMEISDCRSVGRMLIDPIPIKALQNMLAEIETLISTTTPLPENRTARCLELLQTAKALTNDILKRASRVH
Ga0307469_1102943523300031720Hardwood Forest SoilVAIKALQNMLGEIETLISTTTPLPENRTARCIELLEAAKALTNDMVKRGSRVQ
Ga0307468_10133040623300031740Hardwood Forest SoilVAMKALQNILAEIRTLISTTSTSPQDRTARCLELLETATALTNDMMKRGSRIQ
Ga0307473_1007958123300031820Hardwood Forest SoilMFIDPVAFRALQNLLSDIEALISTTTPLPENRPRCLELLQAANALMNDMTKRASRVQ
Ga0307473_1008910533300031820Hardwood Forest SoilMEIADCRSVGRMLIDPIPIKALQNMLAEIETLISTTTPLPENRTTRCLELLQTAKALTNDILKRASRVH
Ga0306925_1152254813300031890SoilMFVDPVAIKALQNVLGEIETLISTTTPLPENRTVRCIELLEAAKALTNEMMKRGSRVH
Ga0306923_1147935723300031910SoilMFVDPVAIKALQNMLGEIEMLISTTTPLPENRTARCMELLEASKALMNDMMKRVSRVQQK
Ga0306926_1054168333300031954SoilRSVDGMFVDPVAIKALQNMLGEIEMLISTTTPLPENRTARCMELLEASKALMNDMMKRVSRVQQKH
Ga0310911_1049928713300032035SoilFVDPVAIKALQNMLGEIEMLISTTTPLPENRTARCMELLEASKALMNDMMKRVSRVQQKH
Ga0306924_1211651913300032076SoilPVAIKALQNMLGEIEMLISTTTPLPENRTARCMELLEASKALMNDMMKRVSRVQQKH
Ga0307471_10049175523300032180Hardwood Forest SoilMEIAGCRSVGRMLIDPIPIKALQNMLAEIETLISTTTPLPENRTARCLELLQTAKALTNDILKRASRVH
Ga0307471_10243227513300032180Hardwood Forest SoilIPIKALQNMLSEIEALISTTTPLPENRTARCLELIQTAKAVTNDILKRTSRVH
Ga0307471_10425147013300032180Hardwood Forest SoilVPSDGLRKATECRSVGRVFVDPVAIKALQNMLGEIETLISTTTPLPENRSARCIELLEAAKALANDMLKRASHVQ
Ga0307472_10094998113300032205Hardwood Forest SoilMEITDCRSVGRMLIDPIPIKALQNMLAEIETLISTTTPLPENRTDRCLELLQTAKALTDDILK
Ga0310810_1084316313300033412SoilMEIADCRSVRRMLIDPVPIKAIQNMLAEIESLLSSTTPHPEKRIARCLELLQAAKAITNDILTRASRVH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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