NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F079068

Metagenome / Metatranscriptome Family F079068

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F079068
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 82 residues
Representative Sequence AKKAAGVPEGDDVKIVVYPRTKTFFQSVIERRGPDNSDKEAVGQTLARILQVVQPVARQLDAAGIKSKDADQDDVLRMSPVPSSQ
Number of Associated Samples 101
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 96.55 %
% of genes from short scaffolds (< 2000 bps) 89.66 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (63.793 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(16.379 % of family members)
Environment Ontology (ENVO) Unclassified
(40.517 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(35.345 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.05%    β-sheet: 0.00%    Coil/Unstructured: 61.95%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF04368DUF507 83.62
PF01850PIN 2.59
PF02604PhdYeFM_antitox 1.72
PF00190Cupin_1 1.72
PF01343Peptidase_S49 0.86
PF08668HDOD 0.86
PF00306ATP-synt_ab_C 0.86
PF02272DHHA1 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.72
COG2161Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM familyDefense mechanisms [V] 1.72
COG4118Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressorDefense mechanisms [V] 1.72
COG0055FoF1-type ATP synthase, beta subunitEnergy production and conversion [C] 0.86
COG0056FoF1-type ATP synthase, alpha subunitEnergy production and conversion [C] 0.86
COG1155Archaeal/vacuolar-type H+-ATPase catalytic subunit A/Vma1Energy production and conversion [C] 0.86
COG1156Archaeal/vacuolar-type H+-ATPase subunit B/Vma2Energy production and conversion [C] 0.86

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.79 %
UnclassifiedrootN/A36.21 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000531|CNBas_1010610Not Available562Open in IMG/M
3300004091|Ga0062387_101312362All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300004152|Ga0062386_100673916All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter848Open in IMG/M
3300004152|Ga0062386_101049575Not Available676Open in IMG/M
3300005445|Ga0070708_100933109All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae814Open in IMG/M
3300005468|Ga0070707_101713879All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300005518|Ga0070699_100681669All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae938Open in IMG/M
3300005536|Ga0070697_102093765Not Available506Open in IMG/M
3300005555|Ga0066692_10069353All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2017Open in IMG/M
3300005591|Ga0070761_10238767All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1084Open in IMG/M
3300005591|Ga0070761_11013372Not Available527Open in IMG/M
3300005938|Ga0066795_10096020All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter881Open in IMG/M
3300006102|Ga0075015_100084761All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1567Open in IMG/M
3300006102|Ga0075015_100470442All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300006162|Ga0075030_100105589All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2294Open in IMG/M
3300006162|Ga0075030_100726215All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300006174|Ga0075014_100014931All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2842Open in IMG/M
3300006174|Ga0075014_100134305All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1193Open in IMG/M
3300006176|Ga0070765_100303641All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1476Open in IMG/M
3300006176|Ga0070765_101257205All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300007255|Ga0099791_10227918All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae881Open in IMG/M
3300009088|Ga0099830_10423957All Organisms → cellular organisms → Bacteria → Acidobacteria1078Open in IMG/M
3300009088|Ga0099830_10583526All Organisms → cellular organisms → Bacteria → Acidobacteria916Open in IMG/M
3300009089|Ga0099828_11266669Not Available653Open in IMG/M
3300009090|Ga0099827_10786310Not Available823Open in IMG/M
3300009518|Ga0116128_1067915All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.1094Open in IMG/M
3300009522|Ga0116218_1285606Not Available739Open in IMG/M
3300009523|Ga0116221_1276893All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae726Open in IMG/M
3300009549|Ga0116137_1143151Not Available666Open in IMG/M
3300009616|Ga0116111_1077408All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.883Open in IMG/M
3300009623|Ga0116133_1102892Not Available727Open in IMG/M
3300009628|Ga0116125_1062185All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300009630|Ga0116114_1035631All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → Acidobacterium ailaaui1442Open in IMG/M
3300009632|Ga0116102_1025044All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2031Open in IMG/M
3300009643|Ga0116110_1022712All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2413Open in IMG/M
3300009643|Ga0116110_1173771All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae706Open in IMG/M
3300009683|Ga0116224_10598471Not Available527Open in IMG/M
3300009698|Ga0116216_10171865All Organisms → cellular organisms → Bacteria → Acidobacteria1331Open in IMG/M
3300009759|Ga0116101_1007110All Organisms → cellular organisms → Bacteria1936Open in IMG/M
3300010343|Ga0074044_10225719All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1240Open in IMG/M
3300010379|Ga0136449_102031096Not Available847Open in IMG/M
3300010379|Ga0136449_102217944Not Available800Open in IMG/M
3300011074|Ga0138559_1062932All Organisms → cellular organisms → Bacteria → Acidobacteria925Open in IMG/M
3300011090|Ga0138579_1214979All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300011269|Ga0137392_10328733All Organisms → cellular organisms → Bacteria → Acidobacteria1265Open in IMG/M
3300012096|Ga0137389_10423199All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1138Open in IMG/M
3300012189|Ga0137388_11755208Not Available553Open in IMG/M
3300012199|Ga0137383_10370440All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300012202|Ga0137363_11501937Not Available565Open in IMG/M
3300012361|Ga0137360_10827339All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae797Open in IMG/M
3300012361|Ga0137360_11626172Not Available551Open in IMG/M
3300012917|Ga0137395_10419743All Organisms → cellular organisms → Bacteria → Acidobacteria959Open in IMG/M
3300012922|Ga0137394_10271956All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1449Open in IMG/M
3300012925|Ga0137419_11229494Not Available628Open in IMG/M
3300014155|Ga0181524_10502402Not Available515Open in IMG/M
3300014159|Ga0181530_10664252Not Available505Open in IMG/M
3300014167|Ga0181528_10461335All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis696Open in IMG/M
3300014169|Ga0181531_10403993All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis840Open in IMG/M
3300014200|Ga0181526_10424189All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae844Open in IMG/M
3300014654|Ga0181525_10092178All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1680Open in IMG/M
3300017935|Ga0187848_10166998All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae961Open in IMG/M
3300017938|Ga0187854_10086492All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1490Open in IMG/M
3300017942|Ga0187808_10542337Not Available541Open in IMG/M
3300017943|Ga0187819_10200397All Organisms → cellular organisms → Bacteria → Acidobacteria1178Open in IMG/M
3300017998|Ga0187870_1052714All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1733Open in IMG/M
3300017998|Ga0187870_1216897Not Available666Open in IMG/M
3300018005|Ga0187878_1024398All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3078Open in IMG/M
3300018013|Ga0187873_1020453All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3409Open in IMG/M
3300018015|Ga0187866_1201991All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis737Open in IMG/M
3300018026|Ga0187857_10447299Not Available581Open in IMG/M
3300018034|Ga0187863_10349856All Organisms → cellular organisms → Bacteria → Acidobacteria822Open in IMG/M
3300018037|Ga0187883_10352928All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae752Open in IMG/M
3300018047|Ga0187859_10069699Not Available1852Open in IMG/M
3300019886|Ga0193727_1182556Not Available538Open in IMG/M
3300020199|Ga0179592_10055225All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1808Open in IMG/M
3300020580|Ga0210403_11073747Not Available626Open in IMG/M
3300025434|Ga0208690_1025087All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae995Open in IMG/M
3300025439|Ga0208323_1007801All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2855Open in IMG/M
3300025442|Ga0208034_1025950All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1497Open in IMG/M
3300025453|Ga0208455_1090898Not Available591Open in IMG/M
3300025460|Ga0208562_1077837All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae674Open in IMG/M
3300025477|Ga0208192_1010467All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2708Open in IMG/M
3300025581|Ga0208355_1070032All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae801Open in IMG/M
3300025619|Ga0207926_1121163Not Available616Open in IMG/M
3300026496|Ga0257157_1080574Not Available563Open in IMG/M
3300026499|Ga0257181_1072114Not Available593Open in IMG/M
3300026508|Ga0257161_1015980All Organisms → cellular organisms → Bacteria → Acidobacteria1405Open in IMG/M
3300026514|Ga0257168_1019842All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1380Open in IMG/M
3300026514|Ga0257168_1022978All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1300Open in IMG/M
3300026551|Ga0209648_10022816All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5470Open in IMG/M
3300026557|Ga0179587_10705193Not Available665Open in IMG/M
3300026557|Ga0179587_10793605Not Available624Open in IMG/M
3300027570|Ga0208043_1100520Not Available784Open in IMG/M
3300027587|Ga0209220_1050775All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1107Open in IMG/M
3300027604|Ga0208324_1071509All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis989Open in IMG/M
3300027662|Ga0208565_1194495Not Available579Open in IMG/M
3300027853|Ga0209274_10689696Not Available527Open in IMG/M
3300027882|Ga0209590_10888233Not Available562Open in IMG/M
3300027898|Ga0209067_10309528All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis870Open in IMG/M
3300028678|Ga0302165_10201585Not Available550Open in IMG/M
3300028746|Ga0302233_10306452Not Available601Open in IMG/M
3300029917|Ga0311326_10005275All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis8404Open in IMG/M
3300029954|Ga0311331_11544582Not Available539Open in IMG/M
3300030706|Ga0310039_10389621Not Available514Open in IMG/M
3300031231|Ga0170824_124835099Not Available769Open in IMG/M
3300031708|Ga0310686_102246473Not Available527Open in IMG/M
3300031753|Ga0307477_10465957All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis861Open in IMG/M
3300031754|Ga0307475_10163163All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1774Open in IMG/M
3300031754|Ga0307475_10609971All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis873Open in IMG/M
3300032160|Ga0311301_11557634All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis808Open in IMG/M
3300032160|Ga0311301_12992423Not Available508Open in IMG/M
3300032205|Ga0307472_100662462All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis932Open in IMG/M
3300032515|Ga0348332_14362273All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter964Open in IMG/M
3300033561|Ga0371490_1034681All Organisms → cellular organisms → Bacteria → Acidobacteria1586Open in IMG/M
3300034124|Ga0370483_0052468All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1287Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil16.38%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland13.79%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil12.07%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland9.48%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.03%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog5.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.17%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.31%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.45%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.59%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.72%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.86%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.86%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.86%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.86%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.86%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.86%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.86%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.86%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.86%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.86%
Quercus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000531Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNB_Illumina_AssembledHost-AssociatedOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005938Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009549Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100EnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009628Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10EnvironmentalOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009643Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011074Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011090Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017942Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018005Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150EnvironmentalOpen in IMG/M
3300018013Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100EnvironmentalOpen in IMG/M
3300018015Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300025434Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025439Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025442Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025453Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025460Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025477Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025581Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026508Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027330Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)EnvironmentalOpen in IMG/M
3300027570Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027604Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027662Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028678Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2EnvironmentalOpen in IMG/M
3300028746Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1EnvironmentalOpen in IMG/M
3300029917I_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300033561Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fractionEnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
CNBas_101061023300000531Quercus RhizosphereLARKAANIADTEDVRIVVYPRPKTFLQSLLQRQGPDNSDKEAVGQTLARILEIVRPMARQLDAAGVNRKNEGQEDVLRMPEFESK*
Ga0062387_10131236223300004091Bog Forest SoilALKLTKKAIGVLESDDVKIVVYPRPKTLLQTILDRRGSENSDKEAASQILARVLQEVQPVARQLDAVGIKSRSKDQDDVLQMMEFETGK*
Ga0062386_10067391613300004152Bog Forest SoilKKAAGVPEGDDVKIVVYPRPKTFFESVIERRRGPDNSDREAVGQTLARILQVVQPVARQFDAAGIKSKDTDQEDVLRMTTVPSSQ*
Ga0062386_10104957513300004152Bog Forest SoilKAAGVPEGDDVKIVVYPRPKTFFESVMKYRGAENSDKEALGQTLARILQEVQPVARQLDAVGIKGKDEDQDDVLRMTAVPSTQ*
Ga0070708_10093310913300005445Corn, Switchgrass And Miscanthus RhizosphereTALNLARKAANIADGEDVRIIVYPRPKTLLQSLLQRQGPDNSDKEAVGQTLARILEIVQPMARQLDAAGVNRKNEDQDDVLRMPVVEVGR*
Ga0070707_10171387913300005468Corn, Switchgrass And Miscanthus RhizosphereALNLARKAANIPDGEDVRIIVYPRPKTLLQSLLQRQGPDNSDKEAVAQTLARILEIVQPMARQLDAAGIKSKNEDQEDVLRMPVVEVGR*
Ga0070699_10068166913300005518Corn, Switchgrass And Miscanthus RhizosphereALNLARKAAGMADGEDVRMVVYPRPKTLFQSLLQRQGPDNSDKEAVNQTLARILEIIQPMARELDAAGVKSKNEDQEDVLRMPVVEPGK*
Ga0070697_10209376513300005536Corn, Switchgrass And Miscanthus RhizosphereADGEDVRIIVYPRPKTLLQSLLQRQGPDNSDKEAVGQTLARILEIVQPMARQLDAAGVNRRDQEDVLRMPEMESK*
Ga0066692_1006935353300005555SoilIVVYPRPKTFLESMIERRGADNSDKEAVGQTLARVLQVLQPVARQLDAAGIKAKGADQDDVLRMSAVPSSQ*
Ga0070761_1023876713300005591SoilPRTFLQSVLDRRGPDNSDKEAVSQTLAKVLQEVQPLARQLDAAGIKSKNENQEDVLRMKELEVGK*
Ga0070761_1101337213300005591SoilIVVFPRPKTLVESVVSSDGPDNSDKEGVSETLSRILKVVQPVARQLDALGIENEDEDQDDVLRMRAAPSNR*
Ga0066795_1009602013300005938SoilYDTALKLAKKAAGVPEGDDVKIVVYPKPKTFFQSVIERRGPDNSDREAVGETLARILQVVQPVARQLDAVGIKGKDTDQDDVLRMNPVPSGP*
Ga0075015_10008476113300006102WatershedsYPRPKTFLENLMQRRGAENSDREAVGQTLVRILQEVQPVARELDAVGIRSRSEEQDDVLKMPTVEIGK*
Ga0075015_10047044213300006102WatershedsALKLAKKAAGIPDSDDVRVVVYPRAKTLLEALMQRRGADNSDKEAVAQTLARILQDVQPVARELDAVGITRKDKDQDDVLKMPEMEVGK*
Ga0075030_10010558913300006162WatershedsYDTALKLAKKAAGIPESDDVRIVLYPRPKTLFEALVQRRGADNSDKEAVAQVLARILQDVQPVARELDAVGITRKEKDQDEVLRMPEVEVGK*
Ga0075030_10072621523300006162WatershedsVKIVVYPRPKTFYESVIERRGADNSDKEAVGQTLARILQVVQPVARQLDAVGIKNKDANQDDVLRMSAVPSTQ*
Ga0075014_10001493153300006174WatershedsDTALKLAKKAAGIPDSDDVRVVVYPRAKTLLEALMQRRGADNSDKEAVAQTLARILQDVQPVARELDAVGITRKDKDQDDVLKMPEMEVGK*
Ga0075014_10013430513300006174WatershedsLGGYDMALRLTKKAIGVSEGDEVKIVVYPRPKSLYESVLQRHGADNSDKEAVGETLARILQVVQPVARQLDAAGIKTTDDNGPDDVLRMNAALGMN*
Ga0070765_10030364143300006176SoilALKLAKKAAGVPEGDDVKIVVYPRPKSFLQSLIERRGPDNSDREAVGQAFARILQVVQPVARQLDAAGLKGEDKDQDDVLRMSAVPSSK*
Ga0070765_10125720513300006176SoilYDTALKLAKKAAGVPEGDDVKIVVYPRPKTFLQSLIERRGPDNSDKEAVGQTLAQILQVVQPVARQLDAAGIKANDKDQDDVLRMNPVASSH*
Ga0099791_1022791833300007255Vadose Zone SoilARKAAGVADGDDVRIVVYPRAKTLFQSLLQRQGPDNSDKEAVAQTLSRILEIVQPMARQLDAAGVNRKNKDQDEVLRMPEYESK*
Ga0099830_1042395733300009088Vadose Zone SoilALKLAKKAAGVPEGDDVKIVVYPHPKTFLQSVIERRGADNSDREAVGQTLARILQVVQPVARQLNAAGIKANDADQDDVLRMNPAPSSQ*
Ga0099830_1058352633300009088Vadose Zone SoilKKAAGVPESDEVKIVVYPPPKTFLQSLIERRGADNSDREAVGQTLARILQVVQPVARQLDAAGIKAKDADQDDVLRMNAVDGMN*
Ga0099828_1126666923300009089Vadose Zone SoilKLAKKAAGVPESDEVKIVVYPPPKTFLQSLIERRGADNSDREAVGQTLARILQVVQPVARQLDAAGIKAKDADQDDVLRMNAVDGMN*
Ga0099827_1078631013300009090Vadose Zone SoilNLARKAANIPDGEDVRIIVYPRPKTLLQSLLQRQGPDNSDKEAVGQTLARILEIVQPMARQLDAAGIKSKNEDQEDVLRMPQIESK*
Ga0116128_106791513300009518PeatlandKIVVYPRPKTFFESVMKYRGAENSDKEALGQTLARILQEVQPIARQLDAVGIKGKDKDQDDVLRMTAVPSTQ*
Ga0116218_128560633300009522Peatlands SoilYPRPKTFYQSVIDRRGPDNSDKEALGQTLAKILEVIQPVARQLDAAGIKAKDADQDDVLRMTAVASSQ*
Ga0116221_127689313300009523Peatlands SoilYDTALKLAKKAAGVPESDDVKIVVYPRPKTFYQSVIERRGPDNSDKEAVGQTLARILQVVQPVARQLDAVGIKGKDADQDDVLRMNPVPSSR*
Ga0116137_114315123300009549PeatlandLKLAKKAAGVPEGDDVKIVVYPRPKTFFESVMKYRGAENSDKEALGQTLAKILEVVQPVARELDAAGIKGKDADQDDVLRMHPVASSRQ*
Ga0116111_107740813300009616PeatlandGVPEGDDVKIVVYPRPKTFFESVIERRRGPDNSAREAVGQTLARILQVVQPVARQLDAAGIKSKDTDQDDVLRMTTVPSSQ*
Ga0116133_110289223300009623PeatlandKKAGGVPEGDDVKVVVYPRPKTLLERVIARGGADNSDKEAVGQTLARILEVVQPVARQLDAVGIKNKDSDQDDVLRMNQMPSGR*
Ga0116125_106218523300009628PeatlandVVVYPRPKGLLESVVGWKSADNSDKEAVGQAVARILELVRPVARQMDAAGIKVGNSDQEDVLRMRELSSEP*
Ga0116114_103563123300009630PeatlandALKLAKKAAGVAEGEDVKLAVYPRPKTFYQSVIERRGPDNSDKEAVGQTLAKILAVVQPVARQLDAAGIKGKDADQDDVLRMNAVAISQ*
Ga0116102_102504453300009632PeatlandAKKAAGVPEGDDVKIVVYPRTKTFFQSVIERRGPDNSDKEAVGQTLARILQVVQPVARQLDAAGIKSKDADQDDVLRMSPVPSSQ*
Ga0116110_102271253300009643PeatlandVKLVVYPRAKTFFQSVIERRGPDNSDKEAVGQTLARILEVVQPVARQLDAAGIKGKDADQDDVLRMTAVASSQ*
Ga0116110_117377133300009643PeatlandVYPRPKTFFQSVIERRGPDSSDKEAVGQTLAKILQVVQPVARQLDALGIKGKDTDQDDVLRMKAVPSSQ*
Ga0116224_1059847113300009683Peatlands SoilESEDVKIVVYPQPKTFFQSVIERRGPDNSDKEAVGQTLARILRVVQPVARQLDAVGIKGKDADQDNVLRMNPVASSQ*
Ga0116216_1017186543300009698Peatlands SoilGYDTALKLAKKAGGVPESEDVKIVVYPQPKTFFQSVIERRGPDNSDKEAVGQTLARILRVVQPVARQLDAVGIKGKDADQDNVLRMNPVASSQ*
Ga0116101_100711023300009759PeatlandVVYPRPKTLLGSIIARRGPDNSDKEAMGQTLARILQVVQPVARQLDAVGIKSKDSEQDDVLRMNPVPSSR*
Ga0074044_1022571913300010343Bog Forest SoilKAAKKAAGIPESDEVKIVVYPHPKTLVQSLMERRGAENSDKEAVGETLARILQVVQPVARQLDAAGVRSENKDQDDVLRMNSVPSSER*
Ga0136449_10203109633300010379Peatlands SoilVYPRPKTFFESVMKRRGGAENSDKEAVGQTLARILQEVQPVARQLDALGVKGKDNDQDDVLRMSTVPSSQ*
Ga0136449_10221794433300010379Peatlands SoilVYPRPKTFFESVMKRRGGAENSDKEAVGQTLARILQEVQPVARQLDALGIKSKDNDQDDVLRMNPVPGSEN*
Ga0138559_106293213300011074Peatlands SoilKKAARIPEGDEVKIVVYPRPKTFLESVIERRGAENSEKEAVGQTLARILEVVQPVARQLDAAGIKSQDKN*
Ga0138579_121497913300011090Peatlands SoilYPRPKTFLESVIERRGAENSEKEAVGQTLARILEVVQPVARQLDAAGIKSQDKNQDDVLRMTAVPSSN*
Ga0137392_1032873313300011269Vadose Zone SoilVPESDEVKIVVYPPPKTFLQSLIERRGADNSDREAVGQTLARILQVVQPVARQLDAAGIKAKDADQDDVLRMNAVDGMN*
Ga0137389_1042319933300012096Vadose Zone SoilARKAANIADGEDVRIIVYPRPKTLLQSLLQRQGPDNSDKEAVGQTLARILEIVQPMARQLDAAGVNRKNEDQDEVLRMPLVEVSR*
Ga0137388_1175520813300012189Vadose Zone SoilKAANIADGEDVRIIVYPRPKTLLQSLLQRQGPDNSDKEAVAQTLARILEIVQPMARQLDAAGIKSKNEDQENVLRMPEFESK*
Ga0137383_1037044023300012199Vadose Zone SoilVDELGGYDTALKVAKKAAGVPEGDDVKIVVYPRPKTFLESMIERRGADNSDKEAVGQTLARVLQVLQPVARQLDAAGIKAKDKIRMMF*
Ga0137363_1150193723300012202Vadose Zone SoilYPRPKTFLESVIERRGADNSDKEAVGQTLARVLQVVQPVARQLDAAGIKANDSDQDDVLRMSAVPSSQ*
Ga0137360_1082733933300012361Vadose Zone SoilIVYPRPKTLLQSLLQRQGPNNSDKEAVAQTLARILEIVQPMARQLDAAGIKSKNEDQENVLRMPVYESK*
Ga0137360_1162617213300012361Vadose Zone SoilIVVYPRPKTLLQSLIERQGADNSDKEAVGQTLARVIQVVQPVARQLDAAGIKANDSDQDDVLRMSAVPSSQ*
Ga0137395_1041974333300012917Vadose Zone SoilVKIVVYPRPKTFLQSLIERRGPDNSDKEAVGQTLAQILQVVQPVARQLDAAGIKADDKDQDDVLRMNPVATSH*
Ga0137394_1027195643300012922Vadose Zone SoilYDTALNLARKAANIADAEDVRIVVYPRPKTFLQSLLQRQGPDNSDKEAVGQTLARILEIVRPMARELDAAGVNRKNEGQEDVLRMPEYESK*
Ga0137419_1122949413300012925Vadose Zone SoilAGIGDSDEVRIVVYPRQKTLLQSLLQRQGADNSDKEAVQQTLARILQVVQPVARKLDAAGINRTDDQDEVLRMPAIESK*
Ga0181524_1050240213300014155BogVPEGDDVKIVVYPRPKTFFESVIEHRGADNSEKEAVGQTLARILQVVQPVARQLDAVGIKNRDDKDQEDVLRMNPAPSTQ*
Ga0181530_1066425223300014159BogESDEVKMVVYPRPKTLFESVMERHGAENSDKEALGQTLARILQEVQPVARQLDAAGIKSKDKDQDQDDVLRMMEFEVEK*
Ga0181528_1046133513300014167BogLVKQAIGVPENDEVKIVVYPRPKTLLESVLAYRSADNSDKEAARETLTRILEEVRPVAQQLDALGITAKKRDEQDDVLRMRTVPNAP*
Ga0181531_1040399313300014169BogKKAANIPESDDVKIVVYPRAKTLVESLMQRHGAENSDKEAVGQTLVRILQDVQPVARELKASGITRSGKDQDDVLSMPELEMEK*
Ga0181526_1042418933300014200BogGVPEGDDVKIVVYPRPKSFIESVMKRRGADNSDKEAVGQTLARILQEVQPVARQLDAIGIRSKDNDQDDVLKMNPVPGTN*
Ga0181525_1009217813300014654BogSDEVKIVVFPRPKTLVESVVSSGGADNSDKEGVRETLSRILKVVQPVARQLNAVGIKSKDEDQDDVLRMRAVPGNR*
Ga0187848_1016699833300017935PeatlandAKKAVGVPEGDDVKIVVYPRPKTLLGSIIARRGPDNSDKEAMGQTLARILQVVQPVARQLDAVGIKSKDSEQDDVLRMNPVPSSR
Ga0187854_1008649243300017938PeatlandEGEDVKVVVYPRPKTFYESVIERRGPDNSDKEAVGQTLAKILEVVQPVARELDAAGIKGKDADQDDVLRMHPVASSRQ
Ga0187808_1054233723300017942Freshwater SedimentKIVVYPRPKTFLQSLIERRGADNSDKEAVGQTLARILQVVQPVARQLDAAGIKSKDTDQDDVLRMNAVPSSR
Ga0187819_1020039713300017943Freshwater SedimentTKRAAKIPEGDEVKIVVYPRPKTFLQSEIERRGAENSDKEAVGETLARILQVVQPVARQLDAVGIKNKDEDQDDVLRMTELEIER
Ga0187870_105271443300017998PeatlandDEVKIVVYPQPKTFFQSVIERRGPDNSDREALGQTLARILQEVQPVARQLDAAGIKSKDKDQDQDDVLRMMEFEVEK
Ga0187870_121689723300017998PeatlandALKLAKKAAGVPEGDDVKIVVYPRPKTFFQSVIERRGPDSSDKEAVGQTLAKILQVVQPVARQLDALGIKGKDTDQDDVLRMKAVPSSQ
Ga0187878_102439853300018005PeatlandPEGDDVKIVVYPRPKTFFQSVIERRGPDSSDKEAVGQTLAKILQVVQPVARQLDALGIKGKDTDQDDVLRMKAVPSSQ
Ga0187873_102045313300018013PeatlandKAAGVPDGADVKLVVYPRPKTFFESVIERRGADNSDREAVGQTLARILQEVQPVARQLDEVGIRSKDADQDDVLRMNRVPGSQR
Ga0187866_120199113300018015PeatlandDTALKLAKKAAGVPESDDVKIVVYPRPKTFYQSVIERRGPDNSDREAVGQTLARILQVVQPVARQLDAAGIKSKDKDQDDVLRMKAVPSSQ
Ga0187857_1044729923300018026PeatlandVYPRPKTFYQSVIERRGPDNSDREAVGQTLARILQVVQPVARQLDAVGIKSKDEDQDDVLRMNAVPSSQ
Ga0187863_1034985633300018034PeatlandKIVVYPRPKTLLGSIIARRGPDNSDKEAMGQTLARILQVVQPVARQLDAVGIKSKDSEQDDVLRMNPVPSSR
Ga0187883_1035292833300018037PeatlandKIVIYPRPKSFFESVIAHRSPDSSDKEAVGQALARILEVVQPVARQLDAAGIKGNHDQDEVLRMVQFEQGK
Ga0187859_1006969943300018047PeatlandVKIVVYPRPKTFYQSVIERRGPDNSDREAVGQTLARILQVVQPVARQLDAVGMKAKNEDQDDVLRMKAVPSTQ
Ga0193727_118255623300019886SoilTALSLAKKAAGIGDAEDVRVIEYPRPKTLFQSLLQRGGADNSDKEAVGQTLVRILEVVQPVARKLDAAGINRKDDQDDVLRMPMIESK
Ga0179592_1005522513300020199Vadose Zone SoilGGYDTALKLAKKAAGVPEGDDVKIVVYPRPKTFLESVIERRGADNSDKEAVGQVLARILQVVQPVARQLDAAGIKAKGADQDDVLRMSAVPSSQ
Ga0210403_1107374723300020580SoilGYDTALKLAKKAAGVPEGDDVKIVVYPKPKTFLQSLIERRGADNSDKEAVVQALARILQVVQPVARQLEAAGIKAKDNDQDDVLRMMEFDAGK
Ga0208690_102508713300025434PeatlandNLAKKAVGVPEGDDVKIVVYPRPKTLLGSIIARRGPDNSDKEAMGQTLARILQVVQPVARQLDAVGIKSKDSEQDDVLRMNPVPSSR
Ga0208323_100780153300025439PeatlandGYDTALKLAKKAAGVPEGDDVKIVVYPRPKTFFQSVIERRGPDSSDKEAVGQTLAKILQVVQPVARQLDALGIKGKDTDQDDVLRMKAVPSSQ
Ga0208034_102595013300025442PeatlandEGDDVKIVVYPRPKTFFESVIERRRGPDNSAREAVGQTLARILQVVQPVARQLDAAGIKSKDTDQDDVLRMTTVPSSQ
Ga0208455_109089823300025453PeatlandAKKAAGVPEGDDVKIVVYPRTKTFFQSVIERRGPDNSDKEAVGQTLARILQVVQPVARQLDAAGIKSKDADQDDVLRMSPVPSSQ
Ga0208562_107783713300025460PeatlandIVVYPRPKTFFESVMKYRGAENSDKEALGQTLARILQEVQPIARQLDAVGIKGKDKDQDDVLRMTAVPSTQ
Ga0208192_101046753300025477PeatlandVYPQPKTFFQSVIERRGPDNSDREALGQTLARILQEVQPVARQLDAAGIKSKDKDQDQDDVLRMMEFEVEK
Ga0208355_107003213300025581Arctic Peat SoilTALKLAKKAAGVPEGDDVKIVVYPRPKTFFQSVIERRGPDNSDREAVGQTLARILQVVQPVARQLDAVGIKGKDTDQDDVLRMNPVPSSR
Ga0207926_112116313300025619Arctic Peat SoilVPEGDDVKLVVYPRPKTLLQSLMERRGAENSDKEAVSQTLAKILEVVQPVARELNAVGIRRNEQDQDDVLRMPEFSAY
Ga0257157_108057423300026496SoilLGGYDTALNLAKKAAGVGDGEEVKIVVYPRPKTFFQSLLQRQGADNSDKEAVGQTLARILQVVQPVARKLEAAGINRKDGDQDDVLRMPELEAGK
Ga0257181_107211423300026499SoilPESDDVKIVVYPRPKTFLQSVIERRGPDNSDREAVGQTLARILQVVQPVARQLDAAGIKSNHNDQDDVLRMNPIPSSQ
Ga0257161_101598013300026508SoilGVPEGDDVKIVVYPRPKTFLQSLIERRGPDNSDKEAIGQTLAQILQVVQPVARQLDAAGIKANDKDQDDVLRMNPVASSH
Ga0257168_101984213300026514SoilKIVVYPRPKTFLQSLIERRGPDNSDREAVGQTFAHILQVVQPVARQLDAAGLKGEDKDQDDVLRMSAVPSSE
Ga0257168_102297843300026514SoilEKKAAGVPESDDVKIVVYPHPKTFLQSVIERRGADNSDREAVGQTLARILQVVQPVARQLNAAGIKANDADQDDVLRMNPAPSSQ
Ga0209648_1002281613300026551Grasslands SoilIVVYPRPKTLLQSLMERRGAENSDKEAVSQTLVRILQDVQPVARELKASGITSKEKDQNDVLRMPEFSAY
Ga0179587_1070519313300026557Vadose Zone SoilGYETALKLAKKATGVPESDDVKIVVYPRPKTFLESVIEHRGAENSDKEAVGQTLVKILQDVQPVARQLDAGGIKTNDNDKDQVDVLRMRGFESGK
Ga0179587_1079360523300026557Vadose Zone SoilKAAGVPDGDDVKIVVYPRPKTFLQSVIERRGPDNSDREAVGQTLARILQMVQPVARQLDATGIKGEDKDQDDVLRMMEFEAGK
Ga0207777_103733323300027330Tropical Forest SoilMSAWHEIVLAALKANDVKLVVYPRPKTLLQSILRRQGADNSDKEATGEALAKILQDVQPVARELNAAGVIRKDEDQDNVLRMPEWEAGR
Ga0208043_110052023300027570Peatlands SoilKNAAGVPEGEDVKIVVYPRPKTFYQSVIDRRGPDNSDKEALGQTLAKILEVIQPVARQLDAAGIKAKDADQDDVLRMTAVASSQ
Ga0209220_105077513300027587Forest SoilKAAGVPEGDDVKIVVYPRPKTFLQSVIDRRGADNSDKEAVGQTLARILEVVQPVARELDAAGIRATDKDEDQDNVLRMSTAPGSQR
Ga0208324_107150913300027604Peatlands SoilYPRPKTFYQSVIDRRGPDNSDKEALGQTLAKILEVIQPVARQLDAAGIKAKDADQDDVLRMTAVASSQ
Ga0208565_119449513300027662Peatlands SoilNAAGVPEGEDVKIVVYPRPKTFYQSVIDRRGPDNSDKEALGQTLAKILAVVQPVARQLDAAGIKAKDADQDDVLRMTAVPRSQ
Ga0209274_1068969623300027853SoilIVVFPRPKTLVESVVSSDGPDNSDKEGVSETLSRILKVVQPVARQLDALGIENEDEDQDDVLRMRAAPSNR
Ga0209590_1088823313300027882Vadose Zone SoilNLARKAANIPDGEDVRIIVYPRPKTLLQSLLQRQGPDNSDREAVAQTLARILEIVQPMARQLDAAGIKSKNEDQEDVLRMPQIESK
Ga0209067_1030952833300027898WatershedsIGVSEGDEVKIVVYPRPKSLYESVLQRHGADNSDKEAVGETLARILQVVQPVARQLDAAGIKTTDDNGPDDVLRMNAALGMN
Ga0302165_1020158513300028678FenVVFPRPKTFFQAVIARQTPDNSDKEAVGQTLARILQVVQPVARQLDAAGINRKNKDQDDVLRMPEIEVEK
Ga0302233_1030645213300028746PalsaIAESDEVKIVVFPRPKTLVESVVSSGGPDNSDKEGVSETLSRILKVVQPVARQLDAVGIENKDEDQDDALRMRAVPSNR
Ga0311326_1000527513300029917BogAKKAIGVSENDEVKIVVYPRPKSFFKNLMDRRGADNSDQEAVGQTLARVLADVQPMARKLRAVGITNNDNDNDQDDVLKMMDFTEGK
Ga0311331_1154458213300029954BogAKKAIGVSENDEVKIVVYPRPKSFFKNLMDRRGADNSDQEAVRQTLARVLADVQPMARKLRAVGITNNDNDNDQDDVLKMMDLAEGK
Ga0310039_1038962123300030706Peatlands SoilKKAAGVAEGEDVKIVVYPRPKTFYQSVIDRRGPDNSDKEALGQTLAKILEVIQPVARQLDAAGIKAKDADQDDVLRMTAVASSQ
Ga0170824_12483509913300031231Forest SoilDTALRLTKKAINVSDGEEVKIEVFPREKSLLQSILQRNGAENSDKEAVGQTLTRILEVVQPVARQLDALGIKTSSQAQDDVLQMPSVEPGR
Ga0310686_10224647313300031708SoilGYETALKLAKKTAGIPEGDEVKIVVYPREKSLLQSVIDRRGADNSDKEAVGQTLARVFQMVQPVARQLEAVGIKAGDGNQDDVLRMKAVAGAVK
Ga0307477_1046595713300031753Hardwood Forest SoilKAVGVSDGEEVKIVVFPQPKSFIESLMQRGGPENSDKEAVGQALARILEVVQPVARELDAAGIKSKSKDQDDVLRMTVPSAR
Ga0307475_1016316313300031754Hardwood Forest SoilLRLAKKAVGVSDGEEVKIVVFPHPKSFIESLMQRGGPENSDKEAVGQALARILEVVQPVARELDAAGVKSSGKDQDDVLRMTVPSAR
Ga0307475_1060997113300031754Hardwood Forest SoilKAAGVPEGDDVKIVVYPRPKTFLQSVIERRGPDNSDKEAVGQVLARILQVVQPVARQLDAAGIKAKDNDQDGVLRMMEFEAGK
Ga0311301_1155763433300032160Peatlands SoilVVYPRPKTFFESVMKRRGGAENSDKEAVGQTLARILQEVQPVARQLDALGIKSKDNDQDDVLRMNPVPGSEN
Ga0311301_1299242313300032160Peatlands SoilLGGYDTALKLAKKAAGVAEGEDVKLAVYPRPKTFYQSVIERRGPDNSDKEAVGQTLAKILAVVQPVARQLDAAGIKGKDADQDDVLRMNAVAISQ
Ga0307472_10066246233300032205Hardwood Forest SoilVPEGDDVKIVVYPKPKTFLQSLIERRGADNSDKEAVGQALARILQVVQPVARQLEAAGIKAKDNDQDDVLRMMEFDAGK
Ga0348332_1436227313300032515Plant LitterDDVKIVVYPRPKTFLQSVLDRRGPDNSDKEAIGQTLAKVLQVMQPVARQLNAAGIKNKDRDQDDVLQMMEFEAGK
Ga0371490_103468143300033561Peat SoilLKLAKKAAGVPDGDEVKIVVYPRPKTFLQSVIERQGADNSDKEVVGRTLARILQEVQPVARQLDAAGIKGKDEDQDDVLRMMEFELEK
Ga0370483_0052468_21_2873300034124Untreated Peat SoilLKLAKKAAGIPESDDVKIVVYPRPKTWLESVIERRGPDNSDREAMGQTLARVLQVVQPVARQLDAVGIKTQRADQDNTLRMSPELTNH

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.